View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5729_high_10 (Length: 272)
Name: NF5729_high_10
Description: NF5729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5729_high_10 |
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Alignment Details
Target: chr3 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 50453329 - 50453583
Alignment:
| Q |
1 |
tatgtgattctgtctccactttcgtcttctttgcttgtctacccttcttcacaattgtaggcttcttatcatcactctgttcctgataacattagcactt |
100 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50453329 |
tatgtgattctgtctccactttcatcttctttgcttgtctacccttcttcacaattgtaggcttcttatcatcactctgttcctgataacattagcactt |
50453428 |
T |
|
| Q |
101 |
gatttcagcaaacaattacgatccaaattccataatagcaaatttaagactcattcttcttgtgtccagtaaatacctgtggtgcattattatacaaacc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50453429 |
gatttcagcaaacaattacgatccaaattccataataacaaatttaagactcattcttcttgtgtccagtaaatacctgtggtgcattattatacaaacc |
50453528 |
T |
|
| Q |
201 |
caaattactttcctcagcatttgcttgtgcttttcctgtaacctcaagtatgttt |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50453529 |
caaattactttcctcagcatttgcttgtgcttttcctgtaacctcaagtatgttt |
50453583 |
T |
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