View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5729_high_18 (Length: 227)
Name: NF5729_high_18
Description: NF5729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5729_high_18 |
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Alignment Details
Target: chr6 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 5657073 - 5657268
Alignment:
| Q |
14 |
aatataaagactatagtactgatttatacctattcatccattcatattaattaagtccttgtgctgatgatttgattgaatactattctattgaaagctg |
113 |
Q |
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| T |
5657073 |
aatataaagactatagtactgatttatacctattcatccattcatattaattaagtccttgtgctgatgatttgattgaatactattctattgaaagctg |
5657172 |
T |
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| Q |
114 |
gaagaaatcaatatcaattcaagaaaccagtataggcaaacatgggaagctggtgatcaaagtatggcatatggtaatcaaaatgctcactcacaa |
209 |
Q |
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| T |
5657173 |
gaagaaatcaatatcaattcaagaaaccagtataggcaaacatgggaagctggtgatcaaagtatggcatatggtaatcaaaatgctcactcacaa |
5657268 |
T |
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