View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5730_high_17 (Length: 238)
Name: NF5730_high_17
Description: NF5730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5730_high_17 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 3955025 - 3954803
Alignment:
| Q |
1 |
tggtgcaaaagctttctcattgttgagaacaaaatggaaattgaattcaccaaacactcttttaaccttttcttcttctttttcatcttcacatcacgcc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3955025 |
tggtgcaaaagctttctcattgttgagaacaaaatggaaattgaattcaccaaacactcttttaaccttttcttcttctttttcatcttcacatcacgcc |
3954926 |
T |
|
| Q |
101 |
aagttcaaagctccaatggatatggctgcaagagatggcgaatttagggtttttattgttgccggcgaggtttccggtgattccatcgcttctcgtctta |
200 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3954925 |
aagttcaaagctccaatggatatggctgcaagagatggcgaatttagggtttttgttgttgccggcgaggtttccggtgattccatcgcttctcgtctta |
3954826 |
T |
|
| Q |
201 |
tggcttctcttaagcttctctct |
223 |
Q |
| |
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||||||||||||||||||||||| |
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|
| T |
3954825 |
tggcttctcttaagcttctctct |
3954803 |
T |
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