View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5730_high_6 (Length: 408)
Name: NF5730_high_6
Description: NF5730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5730_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 18 - 391
Target Start/End: Original strand, 682875 - 683248
Alignment:
| Q |
18 |
acaacaataacaacatatacactaatactattagcacctccattactcctaaacagacacaaaaaatcacacacaaaatttccacttcttctactactat |
117 |
Q |
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| T |
682875 |
acaacaataacaacatatacactaatactattagcacctccattactcctaaacacacacaaaaaatcacacacaaaatttccacttcttctactactat |
682974 |
T |
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| Q |
118 |
aactactacaaaacatttagcaaatatttggagagagattcaagggtgcaacaactgggaaaatcttttaaaccctttacaccctattcttcgcgaagag |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
682975 |
aactactacaaaacatttagcaaatatttggagagagattcaagggtgcaacaactgggaaaatcttttaaaccctttacaccctattcttcgcgaagag |
683074 |
T |
|
| Q |
218 |
ataattcgatatggagagtttgttacatcttcttacaaagcctttgatcttgatacaaactcaaaaagatacttgaattgtaaatatggcaaaaagaata |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
683075 |
ataattcgatatggagagtttgttacatcttcttacaaagcctttgatcttgatacaaactcaaaaagatacttgaattgtaaatatggcaaaaagaata |
683174 |
T |
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| Q |
318 |
tgttgaaagaagttggaatggaaaattgtggctatgaagtcacaaaatatatctatgcaacaccaccaaacatc |
391 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
683175 |
tgttgaaagaagttggaatggaaaattgtggctatgaagtcacaaaatatatctatgcaacaccaccaaacatc |
683248 |
T |
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