View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5731_low_11 (Length: 283)
Name: NF5731_low_11
Description: NF5731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5731_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 24 - 265
Target Start/End: Complemental strand, 32157496 - 32157255
Alignment:
| Q |
24 |
tgttccaattccaccacagaatcatgcaacaactgagaactggggaacacacatgatgggagcaccagctgtaccaagtagtcatccagacaacaaaaaa |
123 |
Q |
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| T |
32157496 |
tgttccacttccaccacagaatcatgcaacaactgagaactggggaacacacatgatgggagcaccagctgtaccaagtagtcatccagacaacaaaaaa |
32157397 |
T |
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| Q |
124 |
gcagctttacaaactgcttctgctgatggacaaggacagcctcaggttcattactaccagcaagaccatccttacgtgcaacacagtcctgttgataagc |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32157396 |
gcagctttacaaactgcttctgctgatggacaaggacagcctcaggttcattactaccagcaagaccatccttacgtgcaacacagtcctgttgataagc |
32157297 |
T |
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| Q |
224 |
ctagcagtagtcctatggaatcaattcttcatatgtttgatt |
265 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
32157296 |
ctagcagtagtcctatggaatcaattcttcatatgtttgatt |
32157255 |
T |
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