View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5734_low_13 (Length: 208)

Name: NF5734_low_13
Description: NF5734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5734_low_13
NF5734_low_13
[»] chr7 (32 HSPs)
chr7 (1-208)||(28505190-28505397)
chr7 (1-208)||(34200808-34201015)
chr7 (1-208)||(11995919-11996126)
chr7 (1-208)||(15754778-15754986)
chr7 (62-208)||(16495424-16495570)
chr7 (53-208)||(44014200-44014354)
chr7 (65-208)||(16219670-16219816)
chr7 (65-208)||(67767-67911)
chr7 (65-208)||(18005668-18005813)
chr7 (65-208)||(811084-811230)
chr7 (65-208)||(47831829-47831975)
chr7 (115-208)||(2280125-2280218)
chr7 (65-208)||(16056350-16056495)
chr7 (129-208)||(10063838-10063917)
chr7 (65-208)||(22072935-22073083)
chr7 (153-208)||(12255837-12255892)
chr7 (153-208)||(16386292-16386347)
chr7 (131-207)||(19486766-19486842)
chr7 (153-208)||(13647347-13647401)
chr7 (65-206)||(12901347-12901492)
chr7 (55-208)||(20220132-20220287)
chr7 (132-208)||(38227503-38227578)
chr7 (153-208)||(3564409-3564463)
chr7 (153-208)||(12698853-12698907)
chr7 (164-207)||(15008554-15008597)
chr7 (132-204)||(48991206-48991280)
chr7 (158-208)||(1868044-1868094)
chr7 (166-208)||(9177723-9177765)
chr7 (166-208)||(40443413-40443455)
chr7 (163-208)||(27847884-27847929)
chr7 (168-208)||(13831392-13831431)
chr7 (132-208)||(18456436-18456511)
[»] scaffold0046 (4 HSPs)
scaffold0046 (1-208)||(11314-11521)
scaffold0046 (1-208)||(2019-2226)
scaffold0046 (153-208)||(28436-28490)
scaffold0046 (174-208)||(4574-4608)
[»] chr8 (37 HSPs)
chr8 (1-208)||(5866166-5866373)
chr8 (1-208)||(17140938-17141145)
chr8 (1-208)||(21491017-21491224)
chr8 (33-208)||(21249406-21249582)
chr8 (33-208)||(21255244-21255420)
chr8 (1-208)||(26355589-26355797)
chr8 (65-208)||(21285619-21285765)
chr8 (65-208)||(38855205-38855350)
chr8 (65-208)||(6520390-6520535)
chr8 (65-208)||(23760798-23760943)
chr8 (131-208)||(17612132-17612209)
chr8 (115-208)||(21673726-21673819)
chr8 (158-208)||(21396029-21396079)
chr8 (158-208)||(21790522-21790572)
chr8 (115-208)||(22626758-22626850)
chr8 (152-208)||(983449-983505)
chr8 (164-208)||(21389505-21389549)
chr8 (164-208)||(21778831-21778875)
chr8 (129-208)||(13508105-13508184)
chr8 (129-208)||(13597637-13597716)
chr8 (152-208)||(16199687-16199743)
chr8 (132-208)||(31971279-31971354)
chr8 (163-208)||(17267048-17267093)
chr8 (153-208)||(7372800-7372854)
chr8 (153-208)||(18818454-18818508)
chr8 (153-208)||(18879276-18879330)
chr8 (153-208)||(21919045-21919099)
chr8 (153-208)||(23406401-23406455)
chr8 (177-208)||(41598207-41598238)
chr8 (163-205)||(17439561-17439603)
chr8 (158-208)||(28649094-28649143)
chr8 (1-208)||(20498584-20498795)
chr8 (163-208)||(21923983-21924027)
chr8 (163-208)||(24353042-24353087)
chr8 (163-208)||(37116369-37116414)
chr8 (163-208)||(45131051-45131095)
chr8 (158-206)||(19154936-19154984)
[»] chr2 (24 HSPs)
chr2 (9-205)||(23071849-23072045)
chr2 (65-208)||(28405998-28406144)
chr2 (71-208)||(7679607-7679746)
chr2 (115-200)||(25175880-25175965)
chr2 (129-208)||(19671852-19671931)
chr2 (128-208)||(22134226-22134305)
chr2 (153-208)||(298859-298914)
chr2 (64-208)||(18786854-18787002)
chr2 (132-208)||(38138-38213)
chr2 (132-208)||(23708642-23708718)
chr2 (153-208)||(22105431-22105485)
chr2 (158-208)||(20309130-20309180)
chr2 (132-200)||(7756-7824)
chr2 (152-208)||(23103439-23103494)
chr2 (153-208)||(23060535-23060589)
chr2 (153-208)||(23076464-23076518)
chr2 (153-208)||(23285887-23285941)
chr2 (158-208)||(22413187-22413237)
chr2 (158-208)||(23207299-23207349)
chr2 (163-208)||(22731289-22731333)
chr2 (163-208)||(23654441-23654485)
chr2 (163-208)||(25108909-25108954)
chr2 (168-208)||(32215025-32215064)
chr2 (168-208)||(45029958-45029997)
[»] chr5 (22 HSPs)
chr5 (1-208)||(19660727-19660934)
chr5 (3-208)||(22959426-22959631)
chr5 (1-208)||(21565564-21565774)
chr5 (1-208)||(19668920-19669129)
chr5 (65-208)||(21329450-21329596)
chr5 (129-208)||(36314599-36314678)
chr5 (71-208)||(26011994-26012134)
chr5 (53-208)||(20026881-20027040)
chr5 (65-208)||(21502109-21502255)
chr5 (132-208)||(22144071-22144147)
chr5 (153-208)||(24529242-24529296)
chr5 (153-208)||(25421554-25421608)
chr5 (62-109)||(36314672-36314719)
chr5 (131-207)||(40725876-40725952)
chr5 (153-208)||(8286888-8286942)
chr5 (153-208)||(21729109-21729163)
chr5 (153-208)||(21808434-21808488)
chr5 (153-208)||(21997579-21997633)
chr5 (158-208)||(22178270-22178320)
chr5 (158-208)||(37723925-37723975)
chr5 (176-208)||(20909031-20909063)
chr5 (132-208)||(22412206-22412281)
[»] chr1 (27 HSPs)
chr1 (1-208)||(20918626-20918833)
chr1 (62-208)||(14295504-14295650)
chr1 (31-208)||(20248301-20248478)
chr1 (1-208)||(33681029-33681239)
chr1 (55-177)||(22130853-22130975)
chr1 (1-208)||(52927871-52928069)
chr1 (62-161)||(51130633-51130732)
chr1 (65-208)||(22921823-22921968)
chr1 (46-208)||(22237649-22237814)
chr1 (1-208)||(21754067-21754267)
chr1 (127-208)||(16758671-16758754)
chr1 (111-208)||(35261080-35261177)
chr1 (132-208)||(21861593-21861669)
chr1 (153-208)||(45574932-45574986)
chr1 (154-204)||(38801433-38801483)
chr1 (132-208)||(21896279-21896355)
chr1 (153-208)||(34509802-34509856)
chr1 (153-208)||(50210258-50210312)
chr1 (163-208)||(16368340-16368385)
chr1 (163-208)||(20454608-20454652)
chr1 (163-208)||(20847209-20847253)
chr1 (163-208)||(26064960-26065005)
chr1 (163-208)||(50614171-50614216)
chr1 (163-208)||(50621999-50622044)
chr1 (168-208)||(21707186-21707225)
chr1 (168-208)||(21711728-21711767)
chr1 (168-208)||(22123171-22123211)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-208)||(15683-15890)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-208)||(34145-34352)
[»] chr6 (26 HSPs)
chr6 (1-208)||(28496363-28496570)
chr6 (1-208)||(29808774-29808981)
chr6 (1-208)||(1561325-1561533)
chr6 (1-208)||(19652217-19652425)
chr6 (129-208)||(27333238-27333317)
chr6 (129-208)||(27393978-27394057)
chr6 (1-208)||(19668393-19668604)
chr6 (65-208)||(23019428-23019574)
chr6 (65-208)||(9098466-9098613)
chr6 (128-207)||(4185840-4185919)
chr6 (153-208)||(25644342-25644397)
chr6 (167-208)||(11185527-11185568)
chr6 (163-208)||(22831525-22831570)
chr6 (132-208)||(20109160-20109236)
chr6 (158-208)||(35245608-35245658)
chr6 (158-207)||(16920679-16920728)
chr6 (163-208)||(23076752-23076797)
chr6 (163-208)||(35008170-35008215)
chr6 (131-207)||(8227533-8227609)
chr6 (132-208)||(19303564-19303639)
chr6 (132-208)||(20076722-20076797)
chr6 (128-207)||(4186390-4186469)
chr6 (153-208)||(16496266-16496320)
chr6 (153-208)||(20638328-20638382)
chr6 (153-208)||(29060562-29060616)
chr6 (132-208)||(17287819-17287895)
[»] chr4 (22 HSPs)
chr4 (1-192)||(16596686-16596877)
chr4 (1-208)||(15551839-15552045)
chr4 (1-208)||(12774029-12774229)
chr4 (128-208)||(39706307-39706387)
chr4 (1-115)||(8846490-8846604)
chr4 (1-208)||(13739-13950)
chr4 (65-208)||(12288162-12288309)
chr4 (1-208)||(43198441-43198654)
chr4 (128-208)||(8846378-8846458)
chr4 (153-208)||(52243240-52243295)
chr4 (164-208)||(17046509-17046553)
chr4 (152-208)||(16377565-16377620)
chr4 (153-208)||(3096315-3096369)
chr4 (153-208)||(7088899-7088953)
chr4 (153-208)||(7798796-7798850)
chr4 (153-208)||(12902779-12902833)
chr4 (165-208)||(22636457-22636499)
chr4 (153-208)||(52873412-52873466)
chr4 (177-208)||(54798822-54798853)
chr4 (163-208)||(6190484-6190529)
chr4 (152-204)||(14053344-14053396)
chr4 (132-208)||(16270259-16270334)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-175)||(2334-2508)
[»] chr3 (31 HSPs)
chr3 (1-208)||(13210218-13210426)
chr3 (2-208)||(12174152-12174358)
chr3 (1-208)||(16097350-16097560)
chr3 (1-208)||(16103802-16104011)
chr3 (1-208)||(32307699-32307899)
chr3 (65-208)||(15470946-15471092)
chr3 (1-208)||(9512942-9513139)
chr3 (1-208)||(9520917-9521114)
chr3 (128-208)||(49668095-49668175)
chr3 (1-115)||(49389519-49389633)
chr3 (115-208)||(52523733-52523828)
chr3 (65-200)||(14234517-14234655)
chr3 (1-193)||(1644573-1644757)
chr3 (129-208)||(23274709-23274788)
chr3 (129-208)||(24340743-24340822)
chr3 (140-208)||(27165269-27165337)
chr3 (131-207)||(37642287-37642363)
chr3 (132-208)||(53301574-53301650)
chr3 (153-208)||(26686909-26686963)
chr3 (165-208)||(28194712-28194755)
chr3 (132-208)||(14572611-14572686)
chr3 (131-207)||(22147547-22147623)
chr3 (153-208)||(12399231-12399285)
chr3 (165-208)||(17672645-17672687)
chr3 (153-208)||(20698480-20698534)
chr3 (132-208)||(18438556-18438632)
chr3 (163-208)||(22110406-22110451)
chr3 (132-208)||(23083384-23083460)
chr3 (165-206)||(43840956-43840996)
chr3 (163-208)||(43925980-43926025)
chr3 (132-208)||(11424783-11424858)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-183)||(29169-29354)
scaffold0218 (53-208)||(8014-8173)
[»] scaffold0184 (1 HSPs)
scaffold0184 (62-208)||(1022-1168)
[»] scaffold0556 (1 HSPs)
scaffold0556 (1-208)||(6834-7041)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-208)||(10430-10640)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-208)||(45681-45891)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-208)||(129927-130137)
scaffold0010 (153-206)||(60760-60813)
[»] scaffold0001 (1 HSPs)
scaffold0001 (1-208)||(160706-160915)
[»] scaffold1984 (1 HSPs)
scaffold1984 (25-208)||(151-337)
[»] scaffold1765 (1 HSPs)
scaffold1765 (1-208)||(1104-1314)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-208)||(22563-22769)
[»] scaffold0621 (2 HSPs)
scaffold0621 (65-208)||(6557-6702)
scaffold0621 (132-208)||(8488-8564)
[»] scaffold0102 (1 HSPs)
scaffold0102 (65-208)||(19286-19431)
[»] scaffold0023 (4 HSPs)
scaffold0023 (65-208)||(100396-100541)
scaffold0023 (65-208)||(40128-40273)
scaffold0023 (148-208)||(101521-101581)
scaffold0023 (157-208)||(119897-119948)
[»] scaffold0333 (2 HSPs)
scaffold0333 (128-208)||(6633-6713)
scaffold0333 (128-208)||(14013-14093)
[»] scaffold0020 (1 HSPs)
scaffold0020 (128-208)||(15796-15876)
[»] scaffold0476 (1 HSPs)
scaffold0476 (65-208)||(12788-12934)
[»] scaffold0078 (1 HSPs)
scaffold0078 (72-208)||(10549-10688)
[»] scaffold0278 (1 HSPs)
scaffold0278 (65-208)||(5665-5810)
[»] scaffold0530 (1 HSPs)
scaffold0530 (65-208)||(987-1133)
[»] scaffold0243 (1 HSPs)
scaffold0243 (65-208)||(6076-6222)
[»] scaffold0028 (2 HSPs)
scaffold0028 (65-206)||(62222-62362)
scaffold0028 (1-208)||(132680-132883)
[»] scaffold0207 (1 HSPs)
scaffold0207 (65-208)||(2599-2744)
[»] scaffold0100 (1 HSPs)
scaffold0100 (128-208)||(23902-23982)
[»] scaffold0008 (1 HSPs)
scaffold0008 (65-208)||(14651-14796)
[»] scaffold0138 (1 HSPs)
scaffold0138 (65-208)||(12961-13107)
[»] scaffold2014 (1 HSPs)
scaffold2014 (127-208)||(1054-1135)
[»] scaffold0628 (1 HSPs)
scaffold0628 (115-208)||(2812-2905)
[»] scaffold0034 (1 HSPs)
scaffold0034 (65-208)||(32558-32703)
[»] scaffold0357 (3 HSPs)
scaffold0357 (115-208)||(13150-13243)
scaffold0357 (115-208)||(16106-16199)
scaffold0357 (163-208)||(2683-2728)
[»] scaffold0165 (1 HSPs)
scaffold0165 (115-208)||(27755-27848)
[»] scaffold0075 (1 HSPs)
scaffold0075 (1-200)||(53437-53640)
[»] scaffold0461 (1 HSPs)
scaffold0461 (131-203)||(11491-11563)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-208)||(32120-32323)
[»] scaffold0124 (1 HSPs)
scaffold0124 (131-203)||(38278-38350)
[»] scaffold0106 (2 HSPs)
scaffold0106 (158-208)||(7288-7338)
scaffold0106 (163-208)||(1311-1356)
[»] scaffold0141 (1 HSPs)
scaffold0141 (132-208)||(39499-39574)
[»] scaffold0049 (1 HSPs)
scaffold0049 (132-208)||(75238-75313)
[»] scaffold0032 (1 HSPs)
scaffold0032 (158-208)||(51604-51654)
[»] scaffold0021 (2 HSPs)
scaffold0021 (158-208)||(174788-174838)
scaffold0021 (163-208)||(121788-121832)
[»] scaffold0064 (1 HSPs)
scaffold0064 (163-208)||(47017-47062)
[»] scaffold0003 (1 HSPs)
scaffold0003 (132-208)||(339972-340046)
[»] scaffold0718 (1 HSPs)
scaffold0718 (164-208)||(5183-5227)
[»] scaffold0540 (1 HSPs)
scaffold0540 (132-208)||(3174-3249)
[»] scaffold0413 (1 HSPs)
scaffold0413 (132-208)||(12590-12666)
[»] scaffold0074 (1 HSPs)
scaffold0074 (132-208)||(38725-38801)
[»] scaffold1842 (1 HSPs)
scaffold1842 (153-208)||(1093-1147)
[»] scaffold0358 (1 HSPs)
scaffold0358 (153-208)||(4734-4788)
[»] scaffold0247 (1 HSPs)
scaffold0247 (129-208)||(18047-18126)
[»] scaffold0120 (3 HSPs)
scaffold0120 (153-208)||(16135-16189)
scaffold0120 (132-208)||(32980-33055)
scaffold0120 (132-208)||(45950-46025)
[»] scaffold0011 (2 HSPs)
scaffold0011 (153-208)||(168023-168077)
scaffold0011 (163-208)||(51935-51979)
[»] scaffold0908 (1 HSPs)
scaffold0908 (115-208)||(3192-3285)
[»] scaffold0351 (1 HSPs)
scaffold0351 (158-208)||(16304-16354)
[»] scaffold0022 (2 HSPs)
scaffold0022 (163-208)||(129025-129069)
scaffold0022 (163-207)||(78345-78389)
[»] scaffold0427 (1 HSPs)
scaffold0427 (132-208)||(13519-13594)
[»] scaffold0420 (1 HSPs)
scaffold0420 (164-208)||(13793-13837)
[»] scaffold0647 (1 HSPs)
scaffold0647 (164-208)||(6177-6223)
[»] scaffold0507 (1 HSPs)
scaffold0507 (132-208)||(8082-8160)
[»] scaffold0292 (1 HSPs)
scaffold0292 (153-208)||(365-419)
[»] scaffold0211 (2 HSPs)
scaffold0211 (1-76)||(28700-28775)
scaffold0211 (153-208)||(28813-28869)
[»] scaffold0122 (1 HSPs)
scaffold0122 (153-208)||(26110-26164)
[»] scaffold0056 (1 HSPs)
scaffold0056 (153-208)||(17262-17316)
[»] scaffold0042 (1 HSPs)
scaffold0042 (153-208)||(24348-24402)
[»] scaffold0598 (1 HSPs)
scaffold0598 (158-208)||(1098-1148)
[»] scaffold0456 (1 HSPs)
scaffold0456 (158-208)||(10472-10522)
[»] scaffold0235 (1 HSPs)
scaffold0235 (164-206)||(11499-11540)
[»] scaffold0123 (1 HSPs)
scaffold0123 (158-208)||(25128-25178)
[»] scaffold0070 (1 HSPs)
scaffold0070 (154-208)||(4546-4599)
[»] scaffold1403 (1 HSPs)
scaffold1403 (163-208)||(572-617)
[»] scaffold0139 (1 HSPs)
scaffold0139 (158-207)||(38339-38388)
[»] scaffold0113 (1 HSPs)
scaffold0113 (163-208)||(32089-32133)
[»] scaffold0145 (1 HSPs)
scaffold0145 (132-208)||(32964-33039)
[»] scaffold0114 (1 HSPs)
scaffold0114 (132-208)||(15487-15562)
[»] scaffold0026 (1 HSPs)
scaffold0026 (132-208)||(25918-25993)


Alignment Details
Target: chr7 (Bit Score: 164; Significance: 8e-88; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 164; E-Value: 8e-88
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28505190 - 28505397
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||| ||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  28505190 ctaagttgtttaccttgttgtcaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 28505289  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  28505290 agtttgataattgagttgctgatttatatccgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 28505389  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  28505390 gtcggtct 28505397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 34201015 - 34200808
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||| | |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  34201015 ctaagttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 34200916  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  34200915 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 34200816  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  34200815 gtcggtct 34200808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 11995919 - 11996126
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||| |||||||||||| ||||||||| | |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11995919 ctaatttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 11996018  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    ||||||||| |||||||| ||||||| |||| ||||||||||||||| ||||||||||||| |||||||||||||||||||| | ||||||| |||||||    
T  11996019 agtttgatatttgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgttgtttgttaattaactaagatgcatga 11996118  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  11996119 gtcggtct 11996126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 15754778 - 15754986
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||| ||||||| ||| |||||||||| ||| |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||    
T  15754778 ctaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatgactt 15754877  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||  ||||| ||||| ||||||||| ||||||||||||||    
T  15754878 atgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaactaagctgcatg 15754977  T
Q  200 agtcggtct 208  Q
    |||| ||||    
T  15754978 agtcagtct 15754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 62 - 208
Target Start/End: Complemental strand, 16495570 - 16495424
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  16495570 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 16495471  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| |||||||||||||||||||||||    
T  16495470 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 16495424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 53 - 208
Target Start/End: Complemental strand, 44014354 - 44014200
Alignment:
Q  53 taatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatgg 152  Q
    |||||||| || ||||| |||||||  |||||||||||| |||| ||| ||| |||| ||||| || ||||||  |||||||||| ||||||||| |||     
T  44014354 taatgttgtttttaatggtatataactgtatatacattatatgaattatgtt-gatatttgagatgttgatttgcattcgatattgttatatcatgatga 44014256  T
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  44014255 tttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 44014200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 16219670 - 16219816
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  16219670 taatgttatataattgtatatacattacatgaattatgtttgatgtttaagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 16219769  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| ||||||||| |||||||||||||    
T  16219770 tgcctatgttgttgtttgttatttaactaagctacatgagtcggtct 16219816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 67911 - 67767
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  67911 taatgttatataattgtatatacattatatgaattatgtt-gata-ttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 67814  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  67813 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 67767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 18005813 - 18005668
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  18005813 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttccatac 18005715  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     || ||||||| ||||||||||| |||||||||||||||||||||||    
T  18005714 tgcttatgttgctgtttgttatttaactaagctgcatgagtcggtct 18005668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 811084 - 811230
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  811084 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatac 811183  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| | ||||||||| |||||||||||||||||||||||    
T  811184 tgcctatgttgctatttgttatttaactaagctgcatgagtcggtct 811230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 47831975 - 47831829
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| | |||||||    
T  47831975 taatgttatataattgtatatacattatatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatatgcatac 47831876  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     | |||||||||||||||||||| |||||||||||||||||||||||    
T  47831875 tgtctatgttgttgtttgttatttaactaagctgcatgagtcggtct 47831829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 2280125 - 2280218
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||  ||| ||||||||||||||||  || ||||||||| |||||||||||||||||||  | |||||||||||||||||||||||    
T  2280125 gttgttgatttgcatttgatattattatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtct 2280218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 16056495 - 16056350
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || ||||||||     
T  16056495 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttg-tttgcataa 16056397  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     | |||||||| ||||||||||| ||||||| ||||| |||||||||    
T  16056396 tgtctatgttgctgtttgttatttaactaaggtgcatcagtcggtct 16056350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 10063838 - 10063917
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| | |||||||||||||||||| || |||||| | ||||||| |||||||||| ||||    
T  10063838 ttcgatattattatatcatgatgttgtgcataccgcctatgttgctgattgttaattaactaagttgcatgagtcagtct 10063917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 22073083 - 22072935
Alignment:
Q  65 taatgatatataatcgtatatacattacatga-cttaagtttgataattga---gttgctgatttatattcgatattattatatcattatgg-tttgcat 159  Q
    ||||| |||||||| | |||||||||||||||  ||| |||||||  ||||   |||| ||| ||| ||| |||||| |||||||||  ||| |||||||    
T  22073083 taatgttatataattgcatatacattacatgagtttatgtttgatgtttgagatgttgttgacttacatttgatattgttatatcatgctggttttgcat 22072984  T
Q  160 accgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |  |||||||||||||||||||||| |||||||||||||| ||| ||||    
T  22072983 agtgcctatgttgttgtttgttatttaactaagctgcatgggtcagtct 22072935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 12255837 - 12255892
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| | |||||||||||||||||||| |||||||||||||||||| ||||    
T  12255837 tttgcatactgactatgttgttgtttgttatttaactaagctgcatgagtctgtct 12255892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 16386292 - 16386347
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  16386292 tttgtatactgcctatgtcgttgtttgttatttaactaagctgcatgagtcggtct 16386347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 19486766 - 19486842
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |  |||   ||||||||||||||||||||||    
T  19486766 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtc 19486842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 13647401 - 13647347
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  13647401 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 13647347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 12901492 - 12901347
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcata 160  Q
    ||||| |||||| | ||||||||||||||||| ||| || ||||  | ||| ||||||| |||  ||| |||||| ||||||||| |  |  |||| |||    
T  12901492 taatgttatatagttgtatatacattacatgaattatgtatgatgttgtgatgttgctgttttgcatttgatattgttatatcatgaattattttgtata 12901393  T
Q  161 ccgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    | |||||||||||||||||||  | |||||||||||||||||||||    
T  12901392 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 12901347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 208
Target Start/End: Original strand, 20220132 - 20220287
Alignment:
Q  55 atgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tgg 152  Q
    |||||| | ||||||  ||||||| |||||| |||||||||| |||  | ||||  ||||| || ||||||  ||| |||||| ||||||||| |  ||     
T  20220132 atgttgttaataatgtgatataattgtatatgcattacatgaattatatatgatgtttgagatgttgatttgcatttgatattgttatatcatgaactgt 20220231  T
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||   ||| |||||||||||||||||||  | |||||||||| ||||||||||||    
T  20220232 tttatgtactgcctatgttgttgtttgtttattaactaagctgtatgagtcggtct 20220287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 38227578 - 38227503
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| | || |||||| |||||||||||||||||||||||    
T  38227578 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtct 38227503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 3564409 - 3564463
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  3564409 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 3564463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 12698907 - 12698853
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  12698907 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 12698853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 15008554 - 15008597
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||||  | ||||||||||||||||||||||    
T  15008554 cctatgttgttgtttgtttattaactaagctgcatgagtcggtc 15008597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 204
Target Start/End: Complemental strand, 48991280 - 48991206
Alignment:
Q  132 gatattattatatc--attatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    ||||||||||||||  | |||| |||  |||| |||||||||||||||||||  | |||||||||||||||||||    
T  48991280 gatattattatatctgaatatgttttatatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 48991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 1868044 - 1868094
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||||||||||| |||  | |||||||||||||||||||||||    
T  1868044 atactgcctatgttgttgttagtttattaactaagctgcatgagtcggtct 1868094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Original strand, 9177723 - 9177765
Alignment:
Q  166 tatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||| ||||| || ||||||||||||||||||||    
T  9177723 tatgttgttgtttattattgaattaagctgcatgagtcggtct 9177765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 208
Target Start/End: Complemental strand, 40443455 - 40443413
Alignment:
Q  166 tatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||    
T  40443455 tatgttgctgtttgttatttaactaagctgcacgagtcggtct 40443413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 27847884 - 27847929
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||| ||||| ||||||||||||||| |||||||    
T  27847884 gcctatgttgctgtttattatttaactaagctgcatgaatcggtct 27847929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 13831431 - 13831392
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  13831431 tgttgttgtt-gttatttaactaagctgcatgagtcggtct 13831392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 18456436 - 18456511
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| | |  |||||| |||||||||||||||||||||||    
T  18456436 gatattattatgtcatgttgttttgtatactgcctatgttgctatc-gttatttaactaagctgcatgagtcggtct 18456511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 160; Significance: 2e-85; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 11521 - 11314
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  11521 ctaagttgtttaccttggtgttaatgttcaagtaagactgatgcttatgaattaatgttgcttataatgttatataatagtatatacattacatgactta 11422  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  11421 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 11322  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  11321 gtcggtct 11314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 2226 - 2019
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||| ||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  2226 ctaagttgtttaccttgctgttaatgttccagtaagtctgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 2127  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||  ||||||||||| |||||||||||||||    
T  2126 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgtttgtgtttgttatttaactaagctgcatga 2027  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  2026 gtcggtct 2019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 28490 - 28436
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  28490 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 28436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 4608 - 4574
Alignment:
Q  174 tgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| |||||||||||||||||||||||    
T  4608 tgtttgttatttaactaagctgcatgagtcggtct 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 160; Significance: 2e-85; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 5866166 - 5866373
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  5866166 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 5866265  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  5866266 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 5866365  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  5866366 gtcggtct 5866373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 17141145 - 17140938
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  17141145 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 17141046  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| ||||||||||||||| |||| |||| |||||||| |||||||||| ||||||||||| |||||||||||||||    
T  17141045 agtttgataattgagttgatgatttacattcgatattattatgtcatgatggattgcatactgcctatgttgctgtttgttatttaactaagctgcatga 17140946  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  17140945 gtcggtct 17140938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 21491224 - 21491017
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  21491224 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcctatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 21491125  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  21491124 agtttgataattgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 21491025  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  21491024 gtcggtct 21491017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 21249582 - 21249406
Alignment:
Q  33 taagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcg 132  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21249582 taagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcg 21249483  T
Q  133 atattattatatcattatggtttgcataccgcctatgttg-ttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||| |||  |||||||| || ||||||| |  ||| ||||| |||||||||||||||||||||||    
T  21249482 atattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaactaagctgcatgagtcggtct 21249406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 21255420 - 21255244
Alignment:
Q  33 taagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcg 132  Q
    |||||||| |||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  21255420 taagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgttgatttacattcg 21255321  T
Q  133 atattattatatcattatggtttgcataccgcctatgttg-ttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||| |||  |||||||| || ||||||| |  ||| ||||| |||||||||||||||||||||||    
T  21255320 atattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaactaagctgcatgagtcggtct 21255244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 26355589 - 26355797
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||| |||||| ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| |||||||||||| |||   ||    
T  26355589 ctaagttgtttatctttttgttattgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattaaatggaata 26355688  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||   |||| || || |  ||  |||||||||| ||||||| | ||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  26355689 tgtt-gatggctgagatgttgttgattgcattcgatattgttatatcgtgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcat 26355787  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  26355788 gagtcggtct 26355797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 21285765 - 21285619
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||||||||| |||||||||||||||||  || |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || |||||||||    
T  21285765 taatgatatataattgtatatacattacatgaactatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttgttttgcatac 21285666  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| ||| |||||||||||||||||||    
T  21285665 tgcctatgttgttgtttgttatttaacaaagctgcatgagtcggtct 21285619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 38855205 - 38855350
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  38855205 taatgttatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 38855303  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  38855304 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 38855350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 6520535 - 6520390
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatacc 162  Q
    ||||| |||||||| ||||||||||||||||| ||| |||  || | ||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||     
T  6520535 taatgttatataattgtatatacattacatgaattatgttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatact 6520436  T
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  6520435 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 6520390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 23760798 - 23760943
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||||||| ||| ||| |||||    
T  23760798 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgaattcaatattgttatatcatgatgatttacatac 23760896  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  23760897 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 23760943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 131 - 208
Target Start/End: Original strand, 17612132 - 17612209
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||| ||| ||||||||| ||||||||||||| |||||| | |||||||||||||||||| ||||    
T  17612132 cgatattattatatcatgatgttttgcatactgcctatgttgttgattgttaattaactaagctgcatgagtcagtct 17612209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 21673819 - 21673726
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||  |||||||||| ||||||||| ||| ||||||||  |||||||||||||||||||||| ||||| | |||||||||||||||    
T  21673819 gttgttgatttgcattcgatattgttatatcatgatgatttgcataatgcctatgttgttgtttgttatttaactatgatgcatgagtcggtct 21673726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 21396029 - 21396079
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  21396029 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 21396079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 21790522 - 21790572
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  21790522 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 21790572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 22626850 - 22626758
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||| |||| ||||||||||| ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  22626850 gttgttgatttgtatttgatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 22626758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 983449 - 983505
Alignment:
Q  152 gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||||||| || |||||||| |||||||||||||||||||||||    
T  983449 gtttgcatactgcctatgttgctgattgttatttaactaagctgcatgagtcggtct 983505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 21389505 - 21389549
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21389505 cctatgttgttgtttgttatttaactaagctgcatgagtcggtct 21389549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 21778831 - 21778875
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21778831 cctatgttgttgtttgttatttaactaagctgcatgagtcggtct 21778875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 13508105 - 13508184
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| | ||||||  |||||||||| || |||||| | |||||||||||||||||| ||||    
T  13508105 ttcgatattattatatcatgatgttgtgcatattgcctatgttgctgattgttaattaactaagctgcatgagtcagtct 13508184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 13597637 - 13597716
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| ||||||| | || ||||||| || |||||| | |||||||||||||||||| ||||    
T  13597637 ttcgatattattatatcatgatgttttgcattctgcttatgttgctgattgttaattaactaagctgcatgagtcagtct 13597716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 16199687 - 16199743
Alignment:
Q  152 gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| |||| | |||||||| ||||||||||| |||||||||||||||||||||||    
T  16199687 gtttgaatactgtctatgttgctgtttgttatttaactaagctgcatgagtcggtct 16199743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 31971354 - 31971279
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  31971354 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 31971279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 17267048 - 17267093
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||    
T  17267048 gcctatgttgttgtttgtttattaactaagctgcatgagtcggtct 17267093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 7372854 - 7372800
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  7372854 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 7372800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 18818454 - 18818508
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  18818454 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 18818508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 18879276 - 18879330
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  18879276 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 18879330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 21919045 - 21919099
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  21919045 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 21919099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 23406455 - 23406401
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  23406455 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 23406401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 208
Target Start/End: Complemental strand, 41598238 - 41598207
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||||||||||||||||    
T  41598238 ttgttattcaactaagctgcatgagtcggtct 41598207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 205
Target Start/End: Original strand, 17439561 - 17439603
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcgg 205  Q
    |||||||||||||||||||  | ||||||||||||||||||||    
T  17439561 gcctatgttgttgtttgtttattaactaagctgcatgagtcgg 17439603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 28649094 - 28649143
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| | ||||||||| |||||||||||||||||||||||    
T  28649094 atactgcctatgttgct-tttgttatttaactaagctgcatgagtcggtct 28649143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 20498795 - 20498584
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| |||| |||||   ||||||||| ||  |||||  | |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  20498795 ctaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 20498696  T
Q  101 agtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | ||| |  ||||| || ||||   ||  ||| |||||| |||||||||  |  ||| ||||| |||||||||| ||||||||  | ||||||| |||    
T  20498695 tatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctattttacatactgcctatgttgctgtttgtttattaactaagttgc 20498596  T
Q  197 atgagtcggtct 208  Q
    ||||||||||||    
T  20498595 atgagtcggtct 20498584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 21923983 - 21924027
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  21923983 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 21924027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 24353087 - 24353042
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  24353087 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 24353042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 37116414 - 37116369
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  37116414 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 37116369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 45131051 - 45131095
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  45131051 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 45131095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 19154936 - 19154984
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| |||||||||| ||||||||  | |||||||||||||||||||||    
T  19154936 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 19154984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 157; Significance: 1e-83; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 9 - 205
Target Start/End: Original strand, 23071849 - 23072045
Alignment:
Q  9 tttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgat 108  Q
    |||||||||||| |||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  23071849 tttaccttgttgctaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 23071948  T
Q  109 aattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcgg 205  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||    
T  23071949 aattgagttgctgatttatattcgatattattatatcatgatggtttgcatactgcctatgttgttgttcgttatttaactaagctgcatgagtcgg 23072045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 28406144 - 28405998
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggttt-gcata 160  Q
    ||||| |||||||| |||||||||||  |||| ||||||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  28406144 taatggtatataattgtatatacattttatgaattaagtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttgcata 28406046  T
Q  161 ccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    | |||||||||| ||||||||||| ||||||| |||||||||||||||    
T  28406045 ctgcctatgttgctgtttgttatttaactaagttgcatgagtcggtct 28405998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 71 - 208
Target Start/End: Complemental strand, 7679746 - 7679607
Alignment:
Q  71 tatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcataccgccta 167  Q
    ||||||||  |||||||||||||||| ||| |||||||  ||  || |||| ||| ||| ||| |||||| ||||||||| ||| ||||||||| |||||    
T  7679746 tatataattatatatacattacatgaattatgtttgatgtttatgatgttgatgacttacatt-gatattgttatatcatgatgatttgcatactgccta 7679648  T
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| ||||||||||| |||||||||||||||||| ||||    
T  7679647 tgttgctgtttgttatttaactaagctgcatgagtcagtct 7679607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 115 - 200
Target Start/End: Complemental strand, 25175965 - 25175880
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||| ||||||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  25175965 gttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 25175880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 19671931 - 19671852
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||| || |||||| | |||||||||||||||||| ||||    
T  19671931 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtcagtct 19671852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 22134226 - 22134305
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| || ||| ||||||||| |||||||||| |||| | |||| |||||||||||||||||||||||    
T  22134226 attcgatattgttatattatgatgatttgcatactgcctatgttgctgtt-gatatttaactaagctgcatgagtcggtct 22134305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 298859 - 298914
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  298859 tttgtatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 298914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 64 - 208
Target Start/End: Original strand, 18786854 - 18787002
Alignment:
Q  64 ataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcat 159  Q
    |||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |  ||||||||||    
T  18786854 ataatgttatatagttgtatatacattacatgaattatgtttgatgttgtgacgttgttgaattgcatttgagattgttatatcatgaactggtttgcat 18786953  T
Q  160 accgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||  ||||||||  || |||||||| |||||||||||||||||||||||    
T  18786954 actacctatgttactgattgttatttaactaagctgcatgagtcggtct 18787002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 38138 - 38213
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  38138 gatattattatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 38213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 23708642 - 23708718
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| |||||||||| | | ||||||| ||||||||||| |||||||||||    
T  23708642 gatattgttatatcatgttgttttgcatactgcctatgttgctatctgttatttaactaagctgcttgagtcggtct 23708718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 22105485 - 22105431
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  22105485 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 22105431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 20309180 - 20309130
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| | ||||||||| |||||||||||||||||||||||    
T  20309180 atactgcctatgttgctatttgttatttaactaagctgcatgagtcggtct 20309130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 7756 - 7824
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | |||||||||||||||    
T  7756 gatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatga 7824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 23103439 - 23103494
Alignment:
Q  152 gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| |||| |||||||||| ||||| ||||| |||||||||||||||||||||||    
T  23103439 gtttgtatactgcctatgttgctgttt-ttatttaactaagctgcatgagtcggtct 23103494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 23060589 - 23060535
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  23060589 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 23060535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 23076518 - 23076464
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  23076518 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 23076464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 23285941 - 23285887
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  23285941 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 23285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22413187 - 22413237
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||||||||||||  | ||||||| |||||||||||||||    
T  22413187 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtct 22413237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 23207349 - 23207299
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  23207349 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 23207299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 22731289 - 22731333
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  22731289 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 22731333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 23654441 - 23654485
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||| ||||||| |||||| |||||||||||||||||||||||    
T  23654441 gcctatgctgttgtt-gttatttaactaagctgcatgagtcggtct 23654485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 25108954 - 25108909
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||||  | ||||||||| |||||||||||||    
T  25108954 gcctatgttgttgtttgtttattaactaagctacatgagtcggtct 25108909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 32215025 - 32215064
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  32215025 tgttgttgtt-gttatttaactaagctgcatgagtcggtct 32215064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 45029958 - 45029997
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  45029958 tgttgttgtt-gttatttaactaagctgcatgagtcggtct 45029997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 156; Significance: 4e-83; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 156; E-Value: 4e-83
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 19660727 - 19660934
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  19660727 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 19660826  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||  ||||||||||||| |||||||||| ||||||||||| |||||||||||||||    
T  19660827 agtttgataattgagttgttgatttatattcgatatcattatatcaagatggtttgcatactgcctatgttgctgtttgttatttaactaagctgcatga 19660926  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  19660927 gtcggtct 19660934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 3 - 208
Target Start/End: Original strand, 22959426 - 22959631
Alignment:
Q  3 aagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaag 102  Q
    |||||||||| |||||||||  ||||| |||||||||| ||| ||||||  ||||||| ||| |||| |||||||| ||||||||||||||||||||| |    
T  22959426 aagttgtttatcttgttgtttttgttccagtaagactgatgcatatgaatcaatgttggttaaaatgttatataattgtatatacattacatgacttatg 22959525  T
Q  103 tttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagt 202  Q
    ||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||    
T  22959526 tttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagt 22959625  T
Q  203 cggtct 208  Q
    ||||||    
T  22959626 cggtct 22959631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 21565774 - 21565564
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  21565774 ctaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 21565675  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||| |||| |||||||||| | ||||||||| ||||||||||||    
T  21565674 tgtttgatatttgaaatgttgatgacttgcattcgatattgttatatcatgatgatttggatactgcctatgttgctatttgttatttaactaagctgca 21565575  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  21565574 tgagtcggtct 21565564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 19669129 - 19668920
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaag--taatgttgcttataatgatatataatcgtatatacattacatgact 98  Q
    |||||| ||||| |||||||||  ||||| |||||||||| ||| ||||||   | |||||| |||||||| |||||||| |||||||||||||| ||||    
T  19669129 ctaagtcgtttatcttgttgttgttgttccagtaagactgatgcatatgaatattgatgttgtttataatgttatataattgtatatacattacaggact 19669030  T
Q  99 taagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
    || |||||||| |||||||| ||||||  |||||||||| ||||||||  ||| ||||||||| | |||||||||||||||||||| |||| |||||||     
T  19669029 tatgtttgatatttgagttgttgatttgcattcgatattgttatatcacgatgatttgcatactgtctatgttgttgtttgttatttaactgagctgcaa 19668930  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  19668929 gagtcggtct 19668920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 21329450 - 21329596
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||| || ||| |||||||||    
T  21329450 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgaattcgatattgttatattatgatgatttgcatac 21329549  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  21329550 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 21329596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 36314678 - 36314599
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||| |||||||||||||||||||||||    
T  36314678 ttcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaagctgcatgagtcggtct 36314599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 71 - 208
Target Start/End: Original strand, 26011994 - 26012134
Alignment:
Q  71 tatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcataccgccta 167  Q
    |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||||| | ||| |||||| |||||||||  || ||||||||| |||||    
T  26011994 tatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgattcacatttgatattgttatatcatgttgctttgcatactgccta 26012093  T
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| ||||||||  | |||||||||||||||||||||||    
T  26012094 tgttgctgtttgtttattaactaagctgcatgagtcggtct 26012134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 20026881 - 20027040
Alignment:
Q  53 taatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta- 149  Q
    |||||||| | |||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||||||||||||| |     
T  20026881 taatgttgttgataatgctatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattattatatcatgaa 20026980  T
Q  150 -tggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     || |||| |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  20026981 ctgttttggatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 20027040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 21502109 - 21502255
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  || || || ||||   ||  |||||||||| |||||||||  || ||| |||||    
T  21502109 taatgttatataattgtatatacattacatgaattatgtttgatgtttaagatgatgatgacttgcattcgatattgttatatcatgctgatttacatac 21502208  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||  | |||||||||||||||||||||||    
T  21502209 tgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 21502255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 22144147 - 22144071
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || |||||||||  ||||||||| ||| ||||||| |||||||||||||||||||||||    
T  22144147 gatattgttatatcatgttgttttgcatactacctatgttgatgtctgttatttaactaagctgcatgagtcggtct 22144071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 24529296 - 24529242
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  24529296 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 24529242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 25421608 - 25421554
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  25421608 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 25421554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 109
Target Start/End: Complemental strand, 36314719 - 36314672
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgata 109  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  36314719 ttataatgttatataattgtatatacattacatgacttaagttcgata 36314672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 40725952 - 40725876
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| || |  |||   ||||||||||||||||||||||    
T  40725952 cgatattattatatcatgatgctttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtc 40725876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 8286888 - 8286942
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  8286888 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 8286942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 21729109 - 21729163
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  21729109 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 21729163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 21808434 - 21808488
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  21808434 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 21808488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 21997579 - 21997633
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  21997579 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 21997633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 22178270 - 22178320
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||||||||||||  | ||||||| |||||||||||||||    
T  22178270 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggtct 22178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 37723975 - 37723925
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||| ||||||| |||||||||||||||||| ||||    
T  37723975 atactgcctatgttgctgtctgttatttaactaagctgcatgagtcagtct 37723925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Complemental strand, 20909063 - 20909031
Alignment:
Q  176 tttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||||||||||||||||    
T  20909063 tttgttatttaactaagctgcatgagtcggtct 20909031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 22412281 - 22412206
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||||| |  |||||| ||||||||| |||||||||||||    
T  22412281 gatattattatgtcatgctgttttgtatactgcctatgttgttatc-gttatttaactaagctacatgagtcggtct 22412206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 20918833 - 20918626
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||| |||||||||||||||||||||| |||||||||  |||||||||| | ||||||||||||||| |||||||| |||||||||||||||||||||    
T  20918833 ctaagtcgtttaccttgttgttaatgttccagtaagactcatgcttatgaattgatgttgcttataatgttatataattgtatatacattacatgactta 20918734  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||| |||||||||||||||    
T  20918733 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgcagtttgttatttaactaagctgcatga 20918634  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  20918633 gtcggtct 20918626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 14295504 - 14295650
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  14295504 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 14295603  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
      ||||||||| ||||||||||| |||||||||||||||||||||||    
T  14295604 tacctatgttgctgtttgttatttaactaagctgcatgagtcggtct 14295650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 20248478 - 20248301
Alignment:
Q  31 agtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatatt 130  Q
    |||||||||| ||| ||||||   |||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| || ||||| ||||||  |||    
T  20248478 agtaagactgatgcatatgaatccatgttgtttataatgatatataattgtatatacattacatgacttatgtttgatatttaagttgttgatttgcatt 20248379  T
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||| |||||||||||||||    
T  20248378 cgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttttttaactaagttgcatgagtcggtct 20248301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 33681239 - 33681029
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  33681239 ctaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 33681140  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   ||||  || ||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||| ||||    
T  33681139 tgtttgatatttgagatgttgacgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagttgca 33681040  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  33681039 tgagtcggtct 33681029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 55 - 177
Target Start/End: Original strand, 22130853 - 22130975
Alignment:
Q  55 atgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtt 154  Q
    ||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  22130853 atgttgcttataatgttatataattgtatatgcattacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtt 22130952  T
Q  155 tgcataccgcctatgttgttgtt 177  Q
    || |||| |||||||||| ||||    
T  22130953 tggatactgcctatgttgctgtt 22130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 52927871 - 52928069
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| | ||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  52927871 ctaagttgtttatcttgctattgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 52927970  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| ||||| ||         |||||||||| ||||||||| ||| ||||||||| | |||||||||||||||||||| |||||||||||||||    
T  52927971 tgtttgatatttgagatg---------attcgatattgttatatcatgatgatttgcatactgtctatgttgttgtttgttatttaactaagctgcatga 52928061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 51130732 - 51130633
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  51130732 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 51130633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 22921823 - 22921968
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||  ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  22921823 taatgttatataattgtatatacattatatgaattttgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 22921921  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| |||||||||||||||||||||||    
T  22921922 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 22921968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 46 - 208
Target Start/End: Complemental strand, 22237814 - 22237649
Alignment:
Q  46 tatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattat 142  Q
    |||||| | |||||| || ||| | |||||||| ||||||||||||||||| ||| |||||||| ||||| || ||||   ||  |||||||||| ||||    
T  22237814 tatgaattgatgttgtttctaaagttatataattgtatatacattacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttat 22237715  T
Q  143 atcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| ||| ||||||||  |||||||| | ||||||||||| ||||||||| |||||||||||||    
T  22237714 atcatgatgatttgcataatgcctatgtcgctgtttgttatttaactaagcttcatgagtcggtct 22237649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 21754267 - 21754067
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||| |||||| | |||||| |||||||| |        |||||||||||| |||  |||    
T  21754267 ctaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacattaaatggatta 21754176  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  ||  ||| |||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||    
T  21754175 tgtt-gataattgagatgttgttgattgcatttgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcat 21754077  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  21754076 gagtcggtct 21754067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 16758754 - 16758671
Alignment:
Q  127 tattcgatattattatatcatta--tggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||| ||||||||| |  |||||||||||| |||||||||| ||||||||||| ||||||| |||||||||||||||    
T  16758754 tatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagttgcatgagtcggtct 16758671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 35261080 - 35261177
Alignment:
Q  111 ttgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| || ||||||  ||| |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  35261080 ttgagatgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 35261177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 21861593 - 21861669
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | | |||||||||||||||||||||    
T  21861593 gatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattagctaagctgcatgagtcggtct 21861669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 45574932 - 45574986
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  45574932 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 45574986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 154 - 204
Target Start/End: Original strand, 38801433 - 38801483
Alignment:
Q  154 ttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    ||||| || |||||||||| ||||||||||| |||||||||||||||||||    
T  38801433 ttgcacactgcctatgttgctgtttgttatttaactaagctgcatgagtcg 38801483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 21896279 - 21896355
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || |||| |||| |||||||||| ||||||||  | ||||||| |||||||||||||||    
T  21896279 gatattgttatatcatgctgttttgtatactgcctatgttgctgtttgtttattaactaagttgcatgagtcggtct 21896355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 34509856 - 34509802
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  34509856 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 34509802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 50210258 - 50210312
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  50210258 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 50210312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 16368340 - 16368385
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  16368340 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 16368385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 20454608 - 20454652
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  20454608 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 20454652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 20847209 - 20847253
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  20847209 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 20847253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 26065005 - 26064960
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  ||||||||||||||||||| |||||    
T  26065005 gcctatgttgctgtttgtttatcaactaagctgcatgagttggtct 26064960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 50614171 - 50614216
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  50614171 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 50614216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 50621999 - 50622044
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  50621999 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 50622044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 21707225 - 21707186
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  21707225 tgttgttgtt-gttatttaactaagctgcatgagtcggtct 21707186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 21711767 - 21711728
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  21711767 tgttgttgtt-gttatttaactaagctgcatgagtcggtct 21711728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 22123171 - 22123211
Alignment:
Q  168 tgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| |||||| |||| |||||||||||||||||||||||    
T  22123171 tgttgctgtttgctatttaactaagctgcatgagtcggtct 22123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 144; Significance: 7e-76; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 144; E-Value: 7e-76
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 15890 - 15683
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| |||||||| || |||||||||| | |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  15890 ctaagttgtttaccttgctgttaatgatccagtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacattacatgactta 15791  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| |||| |||||||||| ||||||||||| |||||||||||| ||    
T  15790 agtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgtatactgcctatgttgctgtttgttatttaactaagctgcacga 15691  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  15690 gtcggtct 15683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 34352 - 34145
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||| ||| |||||||||| |||||||||| ||||||||||||||||| |||||||| ||||||| ||||| |||||||    
T  34352 ctaagttgtttaccttgctgttaattttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatatattacttgactta 34253  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| |||| |||||||||||||||||||||| |||||||||| ||||    
T  34252 agtttgataattgagttgttgatttacattcgatattattatatcatgatgggttgtatactgcctatgttgttgtttgttatttaactaagctgtatga 34153  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  34152 gtcggtct 34145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 140; Significance: 2e-73; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 28496363 - 28496570
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  28496363 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 28496462  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |  |||||||| |||||||||||||||    
T  28496463 tgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgcatga 28496562  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  28496563 gtcggtct 28496570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 29808774 - 29808981
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||| |||||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  29808774 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgactta 29808873  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||| |||||||||||||||||||| ||||||||||||| |||||||||| |  |||||||| |||||||||||||||    
T  29808874 tgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgcatga 29808973  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  29808974 gtcggtct 29808981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 1561533 - 1561325
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||| ||||||| ||| |||||||||| ||| |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||    
T  1561533 ctaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatatacattacatgactt 1561434  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||  ||||| ||||| ||||||||| ||||||||||||||    
T  1561433 atgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaactaagctgcatg 1561334  T
Q  200 agtcggtct 208  Q
    |||| ||||    
T  1561333 agtcagtct 1561325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 19652425 - 19652217
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||| ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| |||||||| ||| |||  |||    
T  19652425 ctaagttgtttatcttgctgttattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatactttaaatggatta 19652326  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||  ||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || |||||||||||||    
T  19652325 tgtt-gatgtttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcat 19652227  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  19652226 gagtcggtct 19652217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 27333238 - 27333317
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  27333238 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 27333317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 27393978 - 27394057
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  27393978 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 27394057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 19668604 - 19668393
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||  |||||| ||| ||  ||||| ||| ||||| | |||||| |||||| | ||||||||||||||||| |||    
T  19668604 ctaagttgtttatcttgctgttgttgtttcagtaagtctgatgtatatgatgtagtgttgttgataatgttatatagttgtatatacattacatgaatta 19668505  T
Q  101 agtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcataccgcctatgttgttgtttgttattcaactaagctgc 196  Q
     || ||||  | ||| |||| ||||||  ||| |||||| ||||||||| |  || |||||||||   |||||||| ||||||||| | |||||||||||    
T  19668504 cgtatgatgttgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgcatactatctatgttgctgtttgttaattaactaagctgc 19668405  T
Q  197 atgagtcggtct 208  Q
    ||||||||||||    
T  19668404 atgagtcggtct 19668393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 23019574 - 23019428
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  |||||   ||| ||| ||  ||| |||||| |||||||||  || |||||||||    
T  23019574 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgacttgcatttgatattgttatatcatgttgttttgcatac 23019475  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     || ||||||| ||||||||  | ||||||||||||| |||||||||    
T  23019474 tgcttatgttgctgtttgtttattaactaagctgcataagtcggtct 23019428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 9098466 - 9098613
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcata 160  Q
    ||||| ||||||||  |||||||||||||||| ||| |||||||  | ||| |||| |||  |  ||| |||||| ||||||||| |  || ||||||||    
T  9098466 taatgttatataattatatatacattacatgaattatgtttgatgttgtgaagttgttgaaatgcatttgatattgttatatcatgaattgttttgcata 9098565  T
Q  161 ccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    | |||| ||||| ||||||||||| |||||||||||||||||||||||    
T  9098566 ctgcctttgttgctgtttgttatttaactaagctgcatgagtcggtct 9098613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 4185840 - 4185919
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||| ||||||||| |||  |||||||| |||||||||| ||| |||| || ||||| ||||||||||||||||    
T  4185840 attcgatattgttatatcatgatgagttgcatactgcctatgttgctgtctgttgtttaactatgctgcatgagtcggtc 4185919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 25644397 - 25644342
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| ||| ||||||| |||||||||||||||||||||||    
T  25644397 tttgcatactgcctatgttgctgtctgttatttaactaagctgcatgagtcggtct 25644342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 167 - 208
Target Start/End: Complemental strand, 11185568 - 11185527
Alignment:
Q  167 atgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||| |||||||||||||||||||||||    
T  11185568 atgttgttgtttgttatttaactaagctgcatgagtcggtct 11185527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 22831570 - 22831525
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  22831570 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 22831525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 20109236 - 20109160
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||| ||  || ||||||||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  20109236 gatattgttatattatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 20109160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 35245658 - 35245608
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||| | |||||||||||||||||||||||    
T  35245658 atactgcctatgttggtgtttgttaattaactaagctgcatgagtcggtct 35245608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 207
Target Start/End: Original strand, 16920679 - 16920728
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||| ||||||| || ||||||||||| ||||||||||||||||||||||    
T  16920679 atactgcctatgctgctgtttgttatttaactaagctgcatgagtcggtc 16920728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 23076797 - 23076752
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||    
T  23076797 gcctatgttgttgtttgtttattaactaagctgcatgagtcggtct 23076752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 35008215 - 35008170
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||||  | |||||||||||||||||||||||    
T  35008215 gcctatgttgttgtttgtttattaactaagctgcatgagtcggtct 35008170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 8227533 - 8227609
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| || |  |||   ||||||||||||||||||||||    
T  8227533 cgatattattatatcatgatgttttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggtc 8227609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 19303564 - 19303639
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| ||||  ||| |||||||||| |||||| |||||||||||||||||||||||    
T  19303564 gatattattatgtcatgttgttttgtatacttcctgtgttgttgtt-gttatttaactaagctgcatgagtcggtct 19303639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 20076797 - 20076722
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || ||||  ||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  20076797 gatattattatgtcatgctgttttgtttactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 20076722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 128 - 207
Target Start/End: Complemental strand, 4186469 - 4186390
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||| ||||||||| |||  |||||||| | |||||||| ||  |||| || ||||| ||||||||||||||||    
T  4186469 attcgatattgttatatcatgatgagttgcatactgtctatgttgctgcctgttgtttaactatgctgcatgagtcggtc 4186390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 16496320 - 16496266
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  16496320 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 16496266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 20638328 - 20638382
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| ||||||||||||||||| |||||    
T  20638328 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagttggtct 20638382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 29060616 - 29060562
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  29060616 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 29060562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 17287819 - 17287895
Alignment:
Q  132 gatattattatatcattatg-gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || ||||| ||||  ||||||||| |||| |||||| |||||||||||||||||||||||    
T  17287819 gatattattatgtcatgctgtgtttgtatactacctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 17287895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 136; Significance: 4e-71; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 1 - 192
Target Start/End: Complemental strand, 16596877 - 16596686
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||| || ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  16596877 ctaagttgtttaccttgctgttaatgttcaagtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacattacatgactta 16596778  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaag 192  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||  ||||||||| ||||||||||| |||||||    
T  16596777 agtttgataattgagttgatgatttacattcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaag 16596686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 132; E-Value: 9e-69
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 15552045 - 15551839
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||| ||| || ||||||||| | |||||||||| ||||||||||  |||||||||||||||| |||||||| |||||||||||||||||||||    
T  15552045 ctaagttgtt-accctgctgttaatgtcccagtaagactgatgcttatgaatcaatgttgcttataatgttatataattgtatatacattacatgactta 15551947  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
    |||||||||||||||||| |||||||  ||||||||||||||||||| |||| |||||||| |||||||||| ||||||||||| |||||||||||||||    
T  15551946 agtttgataattgagttgttgatttaccttcgatattattatatcatgatggattgcatactgcctatgttgctgtttgttatttaactaagctgcatga 15551847  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  15551846 gtcggtct 15551839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 12774229 - 12774029
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |        |||||||||||| |||  |||    
T  12774229 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacattaaatggatta 12774138  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  || ||||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||    
T  12774137 tgtt-gataattgagatgttgttgattgtattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcat 12774039  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  12774038 gagtcggtct 12774029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 39706307 - 39706387
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  39706307 attcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 39706387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 8846604 - 8846490
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||||| |||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  8846604 ctaagttgtttatcttgtagttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 8846505  T
Q  101 agtttgataattgag 115  Q
     |||||||| |||||    
T  8846504 tgtttgatatttgag 8846490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 13739 - 13950
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  |||| |||||| |||||||||| || ||||||  | |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  13739 ctaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 13838  T
Q  101 agtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | ||| || ||||| || ||||   ||  ||| |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | |||||||||||    
T  13839 tatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgc 13938  T
Q  197 atgagtcggtct 208  Q
    ||||||||||||    
T  13939 atgagtcggtct 13950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 12288162 - 12288309
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcata 160  Q
    ||||| |||||| | ||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| |||||| ||||||||| |  |||||||||||    
T  12288162 taatgttatatagttgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgatattgttatatcatgaactggtttgcata 12288261  T
Q  161 ccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    | |||||||||| ||||||||||| |||||||||||||||||||||||    
T  12288262 ctgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 12288309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 43198441 - 43198654
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| ||||||||| |||||| |||||||||  ||| |||||| | |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  43198441 ctaagttgtttatcttgttgttgatgttccagtaagactaatgcatatgaattgatgttgtttataatgtgatataattgtatatacattacttgaatta 43198540  T
Q  101 agtttg-ataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcataccgcctatgttgttgtttgttattcaactaagct 194  Q
      | || ||| |||||   ||| ||| ||  ||| |||||  ||||||||| |  || ||||||||  | |||||||| ||||||||||| |||||||||    
T  43198541 tatatgaatatttgagatattgatgacttgcatttgatatggttatatcatgaattgttttgcatattgtctatgttgctgtttgttatttaactaagct 43198640  T
Q  195 gcatgagtcggtct 208  Q
    ||||||||||||||    
T  43198641 gcatgagtcggtct 43198654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 8846458 - 8846378
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||| ||| ||||||||| |||||||||| ||||||||||| |||||||||| || |||||||||    
T  8846458 attcgatattgttatctcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgaataagtcggtct 8846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 52243240 - 52243295
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  52243240 tttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 52243295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 17046553 - 17046509
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  17046553 cctatgttgctgtttgttatttaactaagctgcatgagtcggtct 17046509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 16377565 - 16377620
Alignment:
Q  152 gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  16377565 gtttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 16377620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 3096369 - 3096315
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  3096369 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 3096315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 7088953 - 7088899
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  7088953 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 7088899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 7798850 - 7798796
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  7798850 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 7798796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 12902833 - 12902779
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  12902833 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 12902779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 22636499 - 22636457
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  22636499 ctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 22636457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 52873412 - 52873466
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  52873412 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 52873466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 177 - 208
Target Start/End: Original strand, 54798822 - 54798853
Alignment:
Q  177 ttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||||||||||||||||    
T  54798822 ttgttattcaactaagctgcatgagtcggtct 54798853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 6190529 - 6190484
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||||| | || |||||||||||||||||||||||    
T  6190529 gcctatgttgctgtttgatgtttaactaagctgcatgagtcggtct 6190484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 204
Target Start/End: Original strand, 14053344 - 14053396
Alignment:
Q  152 gtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcg 204  Q
    ||||| |||| | ||||| |||||||||||||| ||||||| |||||||||||    
T  14053344 gtttgtatactgtctatgctgttgtttgttatttaactaagttgcatgagtcg 14053396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 16270259 - 16270334
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| | || |||||| || ||||||||||||||||||||    
T  16270259 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtct 16270334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 119; Significance: 5e-61; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 2334 - 2508
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||| ||||||||| | ||||||||| |||||||||| |||||||||| ||||||||||||||||| |||||||| |||||||||||| ||||||||    
T  2334 ctaagttttttaccttgctattaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattaaatgactta 2433  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttg 175  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2434 agtttgataattgagttgctgatttacattcgatattattatatcatgatggtttgcatacggtctaagttgttg 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 117; Significance: 8e-60; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 117; E-Value: 8e-60
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 13210218 - 13210426
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagt-aatgttgcttataatgatatataatcgtatatacattacatgactt 99  Q
    |||||||||||| |||||||||||  ||| |||||| ||| ||| |||||| | |||||||||||||||| |||||||| ||||||||||||||||||||    
T  13210218 ctaagttgtttatcttgttgttaacattccagtaaggctgatgcatatgaattcaatgttgcttataatgttatataattgtatatacattacatgactt 13210317  T
Q  100 aagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatg 199  Q
    | |||||||| || ||||| ||||||  |||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||| ||||||||||||||    
T  13210318 atgtttgatatttaagttgttgatttgcattcgatattattatatcatgatggtttgcatactgcctatgttgctatttgttatttaactaagctgcatg 13210417  T
Q  200 agtcggtct 208  Q
    |||||||||    
T  13210418 agtcggtct 13210426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 2 - 208
Target Start/End: Original strand, 12174152 - 12174358
Alignment:
Q  2 taagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaa 101  Q
    ||||||||||| |||| ||||  ||||| |||||||||| ||| ||||||  ||||||| |||||||| |||||||| |||||||||||||||||||||     
T  12174152 taagttgtttagcttgctgttgttgttccagtaagactgatgcatatgaatcaatgttgtttataatgttatataattgtatatacattacatgacttat 12174251  T
Q  102 gtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgag 201  Q
    |||||||| |||||||| || |||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||||||||||    
T  12174252 gtttgatatttgagttgttgttttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgag 12174351  T
Q  202 tcggtct 208  Q
    |||||||    
T  12174352 tcggtct 12174358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 16097560 - 16097350
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  16097560 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 16097461  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| |||||| || ||| ||||||||  |||||||||||||||||||||| ||||||||||||    
T  16097460 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatgatgatgatttgcatattgcctatgttgttgtttgttatttaactaagctgca 16097361  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  16097360 tgagtcggtct 16097350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 16104011 - 16103802
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||  | | |||||| | |||||| |||||||| ||||||||  ||||||||||| |||| |||    
T  16104011 ctaagttgtttatcttgctgttgttgttccagtaagactaatccatatgaattgatgttgtttataatgttatataattttatatacattaaatgaatta 16103912  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     |||||||| ||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||| |||||||||| |||| ||| || |||||||||||||    
T  16103911 tgtttgatatttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgttcgttgtttaactaagctgcat 16103812  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  16103811 gagtcggtct 16103802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 32307899 - 32307699
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||| | ||||| |||||||||| |||||||||| |||||||| |||||||| |        |||||||||||| |||  |||    
T  32307899 ctaagttgtttatcttgctgtcattgttctagtaagactgatgcttatgaattaatgttgtttataatgtt--------gtatatacattaaatggatta 32307808  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcat 198  Q
     ||| |||||||||| || || |  ||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||    
T  32307807 tgtt-gataattgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcat 32307709  T
Q  199 gagtcggtct 208  Q
    ||||||||||    
T  32307708 gagtcggtct 32307699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 15471092 - 15470946
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  15471092 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 15470993  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||| ||||||| |||||||||||||||||||||||    
T  15470992 tgcctatgttgctgtctgttatttaactaagctgcatgagtcggtct 15470946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 9513139 - 9512942
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| |||||| | |||||| |||||||| | ||||        ||||||| |||  |||    
T  9513139 ctaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatgttttata--------tacattaaatggatta 9513048  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     ||| ||||| |||| || |||||   |||||||||| ||||||||| ||| ||||||||| |||||||||| |||||||| || |||||||||||||||    
T  9513047 tgtt-gataaatgagatgttgattgc-attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaactaagctgcatga 9512950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 9521114 - 9520917
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||||||||||||| ||||| |||||||||| ||| |||||| | |||||| ||||||||        |  ||||||||||| |||  |||    
T  9521114 ctaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------tgttatatacattaaatggatta 9521023  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     ||| ||||| |||| || |||||   |||||||||| ||||||||| ||| ||||||||| |||||||||| |||||||| || |||||||||||||||    
T  9521022 tgtt-gataaatgagatgttgattgc-attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaactaagctgcatga 9520925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 49668095 - 49668175
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  49668095 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 49668175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 49389519 - 49389633
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| |||||||||||| |||| |||    
T  49389519 ctaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattaaatgaatta 49389618  T
Q  101 agtttgataattgag 115  Q
     |||||||| |||||    
T  49389619 tgtttgatagttgag 49389633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 52523733 - 52523828
Alignment:
Q  115 gttgctgatttatattcgatattattatatcatta--tggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||  |||||||||| ||||||||| |  || ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  52523733 gttgttgatttgcattcgatattgttatatcatgaactgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 52523828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 200
Target Start/End: Complemental strand, 14234655 - 14234517
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  14234655 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 14234556  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||||| || |||||||| |||||||||||||||    
T  14234555 tgcctatgttgctgcttgttatttaactaagctgcatga 14234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 193
Target Start/End: Original strand, 1644573 - 1644757
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||| ||||| |||||||||| ||| |||||| | |||||| ||||||||        | |||||||||||| |||  |||    
T  1644573 ctaagttgtttatcttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------ttgtatatacattaaatggatta 1644664  T
Q  101 agtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagc 193  Q
     | ||||||||||||   ||| ||| || ||||||||||| |||||| || ||| ||||||||| ||||||||||||| |||||||| ||||||||    
T  1644665 tg-ttgataattgagatattgttga-ttgtattcgatattgttatataatgatgatttgcatactgcctatgttgttg-ttgttatttaactaagc 1644757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 23274788 - 23274709
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||| || |||||| | ||||||| |||||||||| ||||    
T  23274788 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagttgcatgagtcagtct 23274709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 24340743 - 24340822
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| | ||||||| || ||||||| || |||||| | |||||||||||||||||| ||||    
T  24340743 ttcgatattattatatcatgatgttgtgcatactgcatatgttgctgattgttaattaactaagctgcatgagtcagtct 24340822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 27165337 - 27165269
Alignment:
Q  140 tatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||  || ||||||||| | |||| ||| ||||||||||| |||||||||||||||||||||||    
T  27165337 tatatcatgttgttttgcatactgtctatattgctgtttgttatttaactaagctgcatgagtcggtct 27165269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 37642287 - 37642363
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |  |||   ||||||||||||||||||||||    
T  37642287 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggtc 37642363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 53301574 - 53301650
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| | |||||||| ||||||||||| ||||||| || ||||||||||||    
T  53301574 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaagttgtatgagtcggtct 53301650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 26686963 - 26686909
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  26686963 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 26686909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 28194755 - 28194712
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  28194755 ctatgttgctgtttgttatttaactaagctgcatgagtcggtct 28194712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 14572686 - 14572611
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| | |||||||| |||| |||||| |||||||||||||||||||||||    
T  14572686 gatattattatgtcatgctgttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 14572611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 22147547 - 22147623
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  |||   ||||||||||||||| ||||||    
T  22147547 cgatattattatatcatgatgttttgcataccgcctacgttgctgatcattaactaactaagctgcatgactcggtc 22147623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 12399285 - 12399231
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  12399285 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 12399231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 165 - 208
Target Start/End: Complemental strand, 17672687 - 17672645
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||| |||||| |||||||||||||||||||||||    
T  17672687 ctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 17672645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 20698480 - 20698534
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  20698480 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 20698534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 18438632 - 18438556
Alignment:
Q  132 gatattattatatcattatggttt-gcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||  || ||| | |||| |||||||||| |||| |||||| ||||||||| |||||||||||||    
T  18438632 gatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctacatgagtcggtct 18438556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 22110406 - 22110451
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  22110406 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 22110451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 23083384 - 23083460
Alignment:
Q  132 gatattattatatcattatggttt-gcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||| || ||| | |||| |||||||||| | || |||||| |||||||||||||||||||||||    
T  23083384 gatattattatgtcattctgtttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggtct 23083460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 43840996 - 43840956
Alignment:
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    ||||||||||||| |||||| |||||||||||||||||||||    
T  43840996 ctatgttgttgtt-gttatttaactaagctgcatgagtcggt 43840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 43926025 - 43925980
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  43926025 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 43925980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 11424783 - 11424858
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||| ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||| ||||    
T  11424783 gatattgttatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcagtct 11424858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 116; Significance: 3e-59; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 1 - 183
Target Start/End: Original strand, 29169 - 29354
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgat---atataatcgtatatacattacatgac 97  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||||||||| |||||||||||||||| ||   ||||||| ||||||||| ||||||||    
T  29169 ctaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataattatgttatataattgtatatacagtacatgac 29268  T
Q  98 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttat 183  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||  ||||||||| ||||||||||    
T  29269 ttaagtttgataattgagttgctgatttacattcgatattattatatcatgatagtttgaatactacctatgttgctgtttgttat 29354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 208
Target Start/End: Original strand, 8014 - 8173
Alignment:
Q  53 taatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta- 149  Q
    |||||||| | |||||| |||||| | ||||||||||||||||| |||  | ||||  | ||| |||| |||||| |||| |||||| ||||||||| |     
T  8014 taatgttgttgataatgttatatagttgtatatacattacatgaattatatatgatgttgtgatgttgttgatttgtatttgatattgttatatcatgaa 8113  T
Q  150 -tggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     ||||||| |||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  8114 ctggtttgtatactgcctatgttgctgtttgtttgttaactaagctgcatgagtcggtct 8173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 115; Significance: 1e-58; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 62 - 208
Target Start/End: Original strand, 1022 - 1168
Alignment:
Q  62 ttataatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    |||||||| |||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1022 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 1121  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| |||||||||||||||||||||||    
T  1122 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 1168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 112; Significance: 8e-57; HSPs: 1)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 7041 - 6834
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||| |||||||| |||||||| |||||||| |||||||||||||||||||||    
T  7041 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattaatgttgtttataatgttatataattgtatatacattacatgactta 6942  T
Q  101 agtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatga 200  Q
     |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| |||| ||||||||||    
T  6941 tgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactgagctgcatga 6842  T
Q  201 gtcggtct 208  Q
    ||||||||    
T  6841 gtcggtct 6834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 97; Significance: 7e-48; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 10430 - 10640
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  10430 ctaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaatta 10529  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||||||    
T  10530 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgca 10629  T
Q  198 tgagtcggtct 208  Q
    | |||||||||    
T  10630 taagtcggtct 10640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 45681 - 45891
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||||||||  ||| ||| | ||||| |||||||||| ||| |||||| | |||||| |||||||| |||||||| |||||||||| |||||| |||    
T  45681 ctaagttgtttatattgctgtaattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacatcacatgaatta 45780  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||||||||   |||| ||| ||| |||||||||| ||||||||| ||| ||||||||| |||||| ||  ||||||||||| ||||||||||||    
T  45781 tgtttgataattgagatgttgatgacttacattcgatattgttatatcatgatgatttgcatactgcctatttttctgtttgttatttaactaagctgca 45880  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  45881 tgagtcggtct 45891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 130137 - 129927
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||| ||||  ||||| |||||||||| ||| |||||| | |||||| ||| |||| |||||||| ||||||||||||||||| |||    
T  130137 ctaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttacaatgttatataattgtatatacattacatgaatta 130038  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| ||||||||| |||||||||| ||| ||||||| ||||||| ||||    
T  130037 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtgtgttatttaactaagatgca 129938  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  129937 tgagtcggtct 129927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 153 - 206
Target Start/End: Original strand, 60760 - 60813
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||| |||| |||||||||| ||||||||  | |||||||||||||||||||||    
T  60760 tttgtatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 60813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 160915 - 160706
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||||||||  ||||   ||||||||| ||| |||||| | |||||| |||||||| |||||||| ||||||| |||||||||||||    
T  160915 ctaagttgtttatcttgttgttgttgtttcggtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatatattacatgactta 160816  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||   |||| ||| ||  ||| |||||| ||||||||| ||| ||||||||| |||||||||| || |||||||| ||||||||||||    
T  160815 tgtttgatatttgacatgttgttga-ttgcatttgatattgttatatcatgatgatttgcatactgcctatgttgctgattgttatttaactaagctgca 160717  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  160716 tgagtcggtct 160706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 77; Significance: 6e-36; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 25 - 208
Target Start/End: Complemental strand, 337 - 151
Alignment:
Q  25 tgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctg 121  Q
    ||||| ||| |||||| | | |||||| | |||||| |||||||  |||||||| ||||||||||||||||| ||| |||||||| |||||   ||| ||    
T  337 tgttctagtgagactgatacatatgaattgatgttgtttataatattatataattgtatatacattacatgaattatgtttgatatttgagatgttgttg 238  T
Q  122 atttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||  |||||||||| ||||||||| ||| ||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||    
T  237 atttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtct 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 1314 - 1104
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    ||||||| |||| |||||||||  ||||| |||||||||| ||  |||||  | |||||| |  ||||| |||||| | ||||||||||| ||||| |||    
T  1314 ctaagttttttatcttgttgttgttgttccagtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacattccatgaatta 1215  T
Q  101 agtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||  ||||   |||| |||  | ||||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||    
T  1214 tgtttgatgtttgaaatgttgatgacctgtattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgca 1115  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  1114 tgagtcggtct 1104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 22563 - 22769
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||  |||| ||||  ||||| |||||||||| ||| |||    | |||||| |||||||| |||||||| ||||||||||||||||| |||    
T  22563 ctaagttgtttgtcttgatgttgctgttccagtaagactgatgcatat----tgatgttgtttataatgttatataattgtatatacattacatgaatta 22658  T
Q  101 agtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     |||||||| ||||| || ||||   ||  |||||||||| ||||||||| ||| ||||||||| | |||||| | ||||||||||| ||||||||||||    
T  22659 tgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgtctatgtcgctgtttgttatttaactaagctgca 22758  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  22759 tgagtcggtct 22769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 6702 - 6557
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  6702 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 6604  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  6603 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 6557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 8564 - 8488
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  8564 gatattgttatatcatgctgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 8488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 65; Significance: 9e-29; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 19431 - 19286
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||    
T  19431 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatac 19333  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  19332 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 19286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 65; Significance: 9e-29; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 100541 - 100396
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| |||  ||| |||||   ||| ||||||  |||||||||||||||||||| ||| |||||||||    
T  100541 taatgttatataattgtatatacattatatgaattatgtta-atatttgagatgttgttgatttgcattcgatattattatatcatgatgatttgcatac 100443  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  100442 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 100396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 40128 - 40273
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||| |||    
T  40128 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcctac 40226  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||| ||||| |||||||||||||||||| ||||    
T  40227 tgcctatgttgctgtttattatttaactaagctgcatgagtcagtct 40273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 101581 - 101521
Alignment:
Q  148 tatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||||||||| |||||||    
T  101581 tatggtttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggtct 101521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 119948 - 119897
Alignment:
Q  157 cataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  119948 catactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 119897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 6713 - 6633
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  6713 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 6633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Complemental strand, 14093 - 14013
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  14093 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 14013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 15796 - 15876
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  15796 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 15876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 12934 - 12788
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| ||||||||     
T  12934 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatat 12835  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| | |||||||||||||||||||||    
T  12834 tgcctatgttgttgtttgttatttagctaagctgcatgagtcggtct 12788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 72 - 208
Target Start/End: Complemental strand, 10688 - 10549
Alignment:
Q  72 atataatcgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcataccgcctat 168  Q
    ||||||| ||||||||||||||||| ||| ||| |||  ||||| || ||||   ||  |||||||||| ||||||||| ||| ||||||||| ||||||    
T  10688 atataattgtatatacattacatgaattatgttcgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctat 10589  T
Q  169 gttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||| ||  |||||||||||||||||||    
T  10588 gttgttgtttgttatttaaaaaagctgcatgagtcggtct 10549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 5810 - 5665
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  5810 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttcatac 5712  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| |||||||||||  ||||||||||||||||||||||    
T  5711 tgcctatgttgctgtttgttattttactaagctgcatgagtcggtct 5665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 987 - 1133
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  ||||||| || ||||||||| ||| | |||||||    
T  987 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatgttgttatatcatgatgatctgcatac 1086  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
      ||||||||||||||||||||| |||||||||||||||||||||||    
T  1087 tacctatgttgttgtttgttatttaactaagctgcatgagtcggtct 1133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 6076 - 6222
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| ||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  6076 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatac 6175  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||  ||||||||||| |||||||||||||||||||||||    
T  6176 tgcctatgttactgtttgttatttaactaagctgcatgagtcggtct 6222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 65 - 206
Target Start/End: Complemental strand, 62362 - 62222
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcataccgc 164  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| ||||| || || | |  |||||||||||||||| ||| ||| ||| ||||| ||    
T  62362 taatgttatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgtgcattcgatattattataccatgatgtttttcatactgc 62264  T
Q  165 ctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||||||| |||||||| || |||||||||||||||||||||    
T  62263 ctatgttgctgtttgttgtttaactaagctgcatgagtcggt 62222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 132883 - 132680
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  ||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| | ||||      ||||||||| |||  |||    
T  132883 ctaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgtata------tatacattaaatggatta 132790  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggttt-gcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     ||| ||||||||||  | ||||  ||| |||||||||| || |||||| ||| ||| ||||||  | ||||||| ||||||||||| | ||||||||||    
T  132789 tgtt-gataattgagacgttgatgattacattcgatattgttgtatcatgatgattttgcatactacttatgttgctgtttgttatttatctaagctgca 132691  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  132690 tgagtcggtct 132680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 2599 - 2744
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||| ||| ||| ||| |||||    
T  2599 taatggtatataattgtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcaatattgttataacatgatgatttacatac 2697  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||||| |||||||||||||||||||||||    
T  2698 tgcctatgttgatgtttgttatttaactaagctgcatgagtcggtct 2744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 23902 - 23982
Alignment:
Q  128 attcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||| |||||||||||||    
T  23902 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctacatgagtcggtct 23982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Original strand, 14651 - 14796
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||| |||| ||| ||| |||| |||||   ||| ||||||  ||||||||||| |||||||| ||| ||| | |||    
T  14651 taatggtatataatagtatatacattatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattactatatcatgatgattttcttac 14749  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||| ||||||||| | |||||||||||||||||||||||    
T  14750 tgcctatgttgctgtttgttagttaactaagctgcatgagtcggtct 14796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 13107 - 12961
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 161  Q
    ||||| |||||||| |||||||||||||| || ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||||||  || |||||||||    
T  13107 taatgttatataattgtatatacattacacgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgctgatttgcatac 13008  T
Q  162 cgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
     |||||||||||||||||||||| |||| ||| ||||||||||||||    
T  13007 tgcctatgttgttgtttgttatttaactgagcagcatgagtcggtct 12961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 1135 - 1054
Alignment:
Q  127 tattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||| |||||||||  || ||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  1135 tatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 1054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 2812 - 2905
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||  ||| |||||| ||||||||| ||| ||||||||| |||||||| | ||||||||||| |||||||||||||||||||||||    
T  2812 gttgttgatttgcatttgatattgttatatcatgatgatttgcatactgcctatgtagctgtttgttatttaactaagctgcatgagtcggtct 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 65 - 208
Target Start/End: Complemental strand, 32703 - 32558
Alignment:
Q  65 taatgatatataatcgtatatacattacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatacc 162  Q
    ||||| |||||| | ||||||||||||||||| ||| |||||||  ||||| || || |  ||  ||| |||||| |||||||||  || |||||||||     
T  32703 taatgttatatagttgtatatacattacatgaattatgtttgatgtttgagatgttgttgattgcatttgatattgttatatcatgttgttttgcatact 32604  T
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  32603 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 32558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 46; Significance: 2e-17; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 208
Target Start/End: Complemental strand, 13243 - 13150
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||  ||| |||||| |||||||||  || ||||||||| |||||||||||||||||||  | |||||||||||||||||||||||    
T  13243 gttgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggtct 13150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 16106 - 16199
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||  ||||||||||||||||||  | |||||||||||||||||||||||    
T  16106 gttgttgatttacatttgatattgttatatcatgttgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtct 16199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 2728 - 2683
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||| |||||  | |||||||||||||||||||||||    
T  2728 gcctatgttgttgcttgtttattaactaagctgcatgagtcggtct 2683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 27755 - 27848
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||  ||||||||||||||||||  | |||||||||||||||||||||||    
T  27755 gttgttgatttacatttgatattgttatatcatgctgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggtct 27848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 200
Target Start/End: Original strand, 53437 - 53640
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  |||| |||||| |||||||||| || ||||||  | |||||| ||||||||  ||||||| ||||||||||||| ||| |||    
T  53437 ctaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaatta 53536  T
Q  101 agtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgc 196  Q
      | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | |||||||||||    
T  53537 tatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctgc 53636  T
Q  197 atga 200  Q
    ||||    
T  53637 atga 53640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 11563 - 11491
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtc 203  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||| | ||||||||||||||||||    
T  11563 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 208
Target Start/End: Complemental strand, 32323 - 32120
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatataatcgtatatacattacatgactta 100  Q
    |||||||||||| |||  ||||  ||||| |||||||||| ||| |||||| | |||||| |||||||| | ||||      ||||||||| |||  |||    
T  32323 ctaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgtata------tatacattaaatggatta 32230  T
Q  101 agtttgataattgagttgctgat--ttatattcgatattattatatcattatggttt-gcataccgcctatgttgttgtttgttattcaactaagctgca 197  Q
     ||| ||||||||||  | ||||  ||| |||||||||| ||||||||| ||| ||| ||||||  | ||||||||||||||||||| | ||||||||||    
T  32229 tgtt-gataattgagacgttgatgattacattcgatattgttatatcatgatgattttgcatactacttatgttgttgtttgttatttatctaagctgca 32131  T
Q  198 tgagtcggtct 208  Q
    |||||||||||    
T  32130 tgagtcggtct 32120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 131 - 203
Target Start/End: Original strand, 38278 - 38350
Alignment:
Q  131 cgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtc 203  Q
    ||||||||||||||||| ||| ||||||||| |||||||||| || |||||| | ||||||||||||||||||    
T  38278 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 38350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 7338 - 7288
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  7338 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggtct 7288  T

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Target: scaffold0106; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 1356 - 1311
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  1356 gcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 1311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 39574 - 39499
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  39574 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 39499  T

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Target: scaffold0049 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 75238 - 75313
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  75238 gatattattatgtcatgctgttttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 75313  T

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Target: scaffold0032 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 51654 - 51604
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  51654 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 51604  T

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Target: scaffold0021 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 174838 - 174788
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||||| |||||||||||||||||||||||    
T  174838 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggtct 174788  T

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Target: scaffold0021; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 121832 - 121788
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||    
T  121832 gcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 121788  T

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Target: scaffold0064 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 47062 - 47017
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||    
T  47062 gcctatgttgttgtttgttatttaactaagctacatgagtcggtct 47017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 339972 - 340046
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| ||||||||||||||  |||||| |||||||||||||||||||||||    
T  339972 gatattattatgtcatgttgttttgtatactgcctatgttgttgt--gttatttaactaagctgcatgagtcggtct 340046  T

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Target: scaffold0718 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 5183 - 5227
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||    
T  5183 cctatgttgatgtttgttatttaactaagctgcatgagtcggtct 5227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 3174 - 3249
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  3174 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 3249  T

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Target: scaffold0413 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 12666 - 12590
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| |||||||||| ||||||||  | ||||||||| |||||||||||||    
T  12666 gatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattaactaagctacatgagtcggtct 12590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 38725 - 38801
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||| |||||||||  || ||||||||| | |||||||| ||||||||||| ||||||| ||||||||| |||||    
T  38725 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaaggtgcatgagtaggtct 38801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 1093 - 1147
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  1093 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 1147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0358 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 4788 - 4734
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  4788 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 4734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 18047 - 18126
Alignment:
Q  129 ttcgatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||| ||| | ||||||  || ||||||| || |||||| | |||||||||||||||||| ||||    
T  18047 ttcgatattattatatcatgatgttgtgcataatgcatatgttgctgattgttaattaactaagctgcatgagtcagtct 18126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 36; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 16189 - 16135
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  16189 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 16135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 32980 - 33055
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||| ||||| |||| |||| | |||||||||||||||||||||||    
T  32980 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtct 33055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 46025 - 45950
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||| ||||| |||| |||| | |||||||||||||||||||||||    
T  46025 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggtct 45950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 168023 - 168077
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||||||||| |||||| |||||||||||||||||||||||    
T  168023 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggtct 168077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 51979 - 51935
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  51979 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 51935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 115 - 208
Target Start/End: Original strand, 3192 - 3285
Alignment:
Q  115 gttgctgatttatattcgatattattatatcattatggttt-gcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| ||| ||| ||| ||||||||||||||||  || ||| | |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  3192 gttgttgaattacatttgatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 3285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0351 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 16354 - 16304
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||| ||||| |||||||||||||||||||||||    
T  16354 atactgcctatgttgctgtttcttatttaactaagctgcatgagtcggtct 16304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 208
Target Start/End: Original strand, 129025 - 129069
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||    
T  129025 gcctatgttgctgtttgttatt-aactaagctgcatgagtcggtct 129069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 207
Target Start/End: Complemental strand, 78389 - 78345
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||||||||| ||||||||  | ||||||||||||||||||||||    
T  78389 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtc 78345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 13594 - 13519
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||| || ||||  || |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  13594 gatattatcatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 13519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 13793 - 13837
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||||||  | |||||||||||||||||||||||    
T  13793 cctatgttgttgtttgttcattaactaagctgcatgagtcggtct 13837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Original strand, 6177 - 6223
Alignment:
Q  164 cctatgttgttgtt--tgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||||||  ||||||| |||||||||||||||||||||||    
T  6177 cctatgttgttgttgttgttatttaactaagctgcatgagtcggtct 6223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 8082 - 8160
Alignment:
Q  132 gatattattatatcatta--tggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||||||||| |  || ||||||||| ||||||| || | ||||||||| || ||||||||||| ||||||||    
T  8082 gatattattatatcatgagctgatttgcatactgcctatgctgctatttgttatttaattaagctgcatgcgtcggtct 8160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 419 - 365
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| ||||||||| ||||| |||||| |||||||||||||||||||||||    
T  419 tttgtatactgcctatgttattgtt-gttatttaactaagctgcatgagtcggtct 365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 32; Significance: 0.000000004; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 28700 - 28775
Alignment:
Q  1 ctaagttgtttaccttgttgttaatgttcgagtaagactggtgcttatgaagtaatgttgcttataatgatatata 76  Q
    |||||||||||| |||| ||| | ||||| |||||||||| ||| |||||| | |||||| |||||||| ||||||    
T  28700 ctaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatata 28775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 28813 - 28869
Alignment:
Q  153 tttgcataccgcctatgttgttgtt-tgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||| |||||||||| |||  |||| || |||||||||||||||||||||||    
T  28813 tttgcatactgcctatgttgctgtaatgttgtttaactaagctgcatgagtcggtct 28869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 26110 - 26164
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  26110 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 26164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 17262 - 17316
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  17262 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 17316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 32; Significance: 0.000000004; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 24348 - 24402
Alignment:
Q  153 tttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||| |||||||||| |||| |||||| |||||||||||||||||||||||    
T  24348 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 24402  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 1098 - 1148
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||| ||| | |||||||||||||||||||||||    
T  1098 atactgcctatgttgatgtttattaattaactaagctgcatgagtcggtct 1148  T

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Target: scaffold0456 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Original strand, 10472 - 10522
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||| | ||||| |||||||||||||||||    
T  10472 atactgcctatgttgctgtttgttaattaactatgctgcatgagtcggtct 10522  T

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Target: scaffold0235 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 206
Target Start/End: Original strand, 11499 - 11540
Alignment:
Q  164 cctatgttgttgtttgttattcaactaagctgcatgagtcggt 206  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  11499 cctatgttgttgtt-gttatttaactaagctgcatgagtcggt 11540  T

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Target: scaffold0123 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 25178 - 25128
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||| |||||||||| ||||||||  | |||||||||||||||||||||||    
T  25178 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 25128  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 4599 - 4546
Alignment:
Q  154 ttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||| ||||||| ||||||| |||||| ||||||| |||||||||||||||    
T  4599 ttgcatactgcctatgctgttgtt-gttatttaactaagttgcatgagtcggtct 4546  T

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Target: scaffold1403 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 617 - 572
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| ||||||||  | |||||||||||||||||||||||    
T  617 gcctatgttgctgtttgtttattaactaagctgcatgagtcggtct 572  T

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Target: scaffold0139 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 158 - 207
Target Start/End: Complemental strand, 38388 - 38339
Alignment:
Q  158 ataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtc 207  Q
    |||| |||||||||| ||||||||  | ||||||||||||||||||||||    
T  38388 atactgcctatgttgctgtttgttcattaactaagctgcatgagtcggtc 38339  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 163 - 208
Target Start/End: Complemental strand, 32133 - 32089
Alignment:
Q  163 gcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    |||||||||| |||| |||||| |||||||||||||||||||||||    
T  32133 gcctatgttgctgtt-gttatttaactaagctgcatgagtcggtct 32089  T

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Target: scaffold0145 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 33039 - 32964
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| | || |||||| || ||||||||||||||||||||    
T  33039 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaattaagctgcatgagtcggtct 32964  T

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Target: scaffold0114 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 15487 - 15562
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| ||||  || |||| |||| |||||||||| | || |||||| |||||||||||||||||| ||||    
T  15487 gatattattatgtcatgttgttttgtatactgcctatgttgctctt-gttatttaactaagctgcatgagtcagtct 15562  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Complemental strand, 25993 - 25918
Alignment:
Q  132 gatattattatatcattatggtttgcataccgcctatgttgttgtttgttattcaactaagctgcatgagtcggtct 208  Q
    ||||||||||| |||| ||  |||| |||| |||||||||| | || |||||| ||||||||| |||||||||||||    
T  25993 gatattattatgtcatgatattttgtatactgcctatgttgctatt-gttatttaactaagcttcatgagtcggtct 25918  T

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