View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5734_low_8 (Length: 242)
Name: NF5734_low_8
Description: NF5734
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5734_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 51511610 - 51511847
Alignment:
| Q |
1 |
tcttcatcttatttctcaaacctcaatattgatcaaaaacttttctgttttgctattaactga-catgaactataacaactgctaaaagaacacgtgatt |
99 |
Q |
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| T |
51511610 |
tcttcatcttatttctcaaacctcaatattgatcaaaaacttttctgttttgctattaactgatcatgaactataacaactgctaaaagaacacgtgatt |
51511709 |
T |
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| Q |
100 |
cttacaaggttgtttgttgtttttgttccaaaaatgaatccttgtgttgtgacttgtgaatatgagaggttccgtgagagttagtcttgttttaatattt |
199 |
Q |
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||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51511710 |
cttacaaggttgtttgttgtttttgttcctaaaatgaatccttgtgttgtgacttgtgaatatgagaggttccgtgagagttagtcttgttttaatattt |
51511809 |
T |
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| Q |
200 |
gaaaatgtgtgactcactcaatgatcaaaatgatgatg |
237 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
51511810 |
gaaaatgtgtgactcactcaatgatcaaaatgatgatg |
51511847 |
T |
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