View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5736_high_5 (Length: 322)
Name: NF5736_high_5
Description: NF5736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5736_high_5 |
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Alignment Details
Target: chr3 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 6 - 306
Target Start/End: Complemental strand, 50579507 - 50579212
Alignment:
| Q |
6 |
cacagaccaccttgcggccaatgcaacattccccacattttgctcatgcaacaatgaatagttatgttgatgcagatcagaatattattaataatattgg |
105 |
Q |
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| T |
50579507 |
cacaaaccactttgcggccaatgcaacattccccacattttgctcatgcaacaatgaatagttatgttgatgcagatcagaatattattaataatattgg |
50579408 |
T |
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| Q |
106 |
agtactagaaaccatgagcaacaacaataatgactcaaatggtaataggtacatgggaatggagaactgcattaatggtctagatacttactggcctaat |
205 |
Q |
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| T |
50579407 |
agtactagaaaccatgagcaacagcaataatgactcaaatggtaataggtacatgggaatggagaactgcattaatggtctagatacttactggcctaat |
50579308 |
T |
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| Q |
206 |
tcctactaaattaattatcattaggagaccggtgattggttacgttagacttgaatgtgaataaataattaaatagtagttatctataattggttttaaa |
305 |
Q |
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| T |
50579307 |
tcctactaaattaattatcgttaggagaccggtgattg-----gttagacttgaatatgaataaataattaaatagtagttatctataattggttttaaa |
50579213 |
T |
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