View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5736_high_7 (Length: 297)
Name: NF5736_high_7
Description: NF5736
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5736_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 257; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 17 - 288
Target Start/End: Complemental strand, 6719634 - 6719362
Alignment:
| Q |
17 |
atgatgaagcagagaagtgcgaaatgcagatattttctaatgctaacaaagataatgatgtctaatatgaatatccacttcccttggtaccatgtaatat |
116 |
Q |
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| T |
6719634 |
atgatcaagcagagaagtgcgaaatgcagatattttctaatgctaacaaagataatgatgtctaatatgaatatccacttcccttggtaccatgtaatat |
6719535 |
T |
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| Q |
117 |
atttagcattactactaagtagtatctttcggatctcaattagtagtaggttgattaagaggttatatagaatgactcttttgtagcatcacctagttat |
216 |
Q |
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| T |
6719534 |
atttagcattactactaagtagtatctttcggatctcaattagtagtaggttgattaagaggttatatagaatgactcttttgtagcatcacctagttat |
6719435 |
T |
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| Q |
217 |
tatgtagataggctaccttgtgacttgatcttcatggaag-ttttaaggcttcctttagcttttgagtataat |
288 |
Q |
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| T |
6719434 |
tatgtagataggctaccttgtgacttgatcttcatggaagtttttaaggcttcctttagcttttgattataat |
6719362 |
T |
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