View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5738-Insertion-2 (Length: 970)

Name: NF5738-Insertion-2
Description: NF5738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5738-Insertion-2
NF5738-Insertion-2
[»] chr3 (48 HSPs)
chr3 (353-884)||(10634485-10635015)
chr3 (351-896)||(12184695-12185229)
chr3 (351-502)||(9991355-9991506)
chr3 (359-502)||(6498429-6498572)
chr3 (351-502)||(12245632-12245783)
chr3 (686-933)||(12245973-12246220)
chr3 (354-445)||(8777341-8777432)
chr3 (354-445)||(18486674-18486765)
chr3 (354-445)||(11280492-11280583)
chr3 (354-445)||(28322330-28322421)
chr3 (357-531)||(16388968-16389142)
chr3 (354-445)||(39374738-39374829)
chr3 (354-444)||(4746373-4746463)
chr3 (354-444)||(5513326-5513416)
chr3 (354-444)||(5545113-5545203)
chr3 (354-444)||(12294282-12294372)
chr3 (354-444)||(41686318-41686408)
chr3 (357-502)||(19781035-19781180)
chr3 (355-435)||(24391597-24391677)
chr3 (354-445)||(38197423-38197515)
chr3 (821-896)||(6498900-6498973)
chr3 (354-432)||(24662536-24662614)
chr3 (355-432)||(5625476-5625553)
chr3 (357-502)||(37869076-37869221)
chr3 (357-502)||(37877594-37877739)
chr3 (356-432)||(5873795-5873871)
chr3 (357-493)||(14468247-14468383)
chr3 (546-614)||(24391788-24391856)
chr3 (686-880)||(9991696-9991892)
chr3 (357-444)||(13124370-13124457)
chr3 (686-847)||(16389303-16389467)
chr3 (546-614)||(4746203-4746271)
chr3 (546-614)||(5625667-5625735)
chr3 (546-614)||(5873985-5874053)
chr3 (546-614)||(12294474-12294542)
chr3 (357-493)||(20681276-20681412)
chr3 (546-614)||(20681465-20681533)
chr3 (546-614)||(38197254-38197322)
chr3 (546-614)||(41686148-41686216)
chr3 (354-444)||(16427251-16427341)
chr3 (546-614)||(14468126-14468194)
chr3 (357-493)||(23759920-23760056)
chr3 (546-614)||(24662354-24662422)
chr3 (357-444)||(6218131-6218218)
chr3 (686-753)||(23759654-23759721)
chr3 (684-753)||(13381094-13381163)
chr3 (684-753)||(13391688-13391757)
chr3 (684-713)||(19780818-19780847)
[»] chr6 (27 HSPs)
chr6 (351-933)||(26023909-26024470)
chr6 (353-862)||(27374999-27375508)
chr6 (353-862)||(27465356-27465865)
chr6 (686-896)||(22451160-22451371)
chr6 (354-445)||(32309154-32309245)
chr6 (354-445)||(4633532-4633623)
chr6 (354-445)||(12724940-12725031)
chr6 (357-445)||(22450831-22450919)
chr6 (354-445)||(27344349-27344440)
chr6 (354-445)||(27405089-27405180)
chr6 (354-444)||(25790324-25790414)
chr6 (354-444)||(26867412-26867502)
chr6 (357-493)||(32970034-32970170)
chr6 (354-444)||(3664021-3664111)
chr6 (354-432)||(26028027-26028105)
chr6 (546-614)||(12857378-12857446)
chr6 (357-493)||(12857499-12857635)
chr6 (546-614)||(32970223-32970291)
chr6 (546-614)||(34815440-34815508)
chr6 (357-444)||(34815251-34815338)
chr6 (546-614)||(12725132-12725200)
chr6 (546-614)||(25790154-25790222)
chr6 (546-614)||(26027845-26027913)
chr6 (684-753)||(12857233-12857302)
chr6 (686-753)||(27477169-27477236)
chr6 (354-425)||(27477497-27477568)
chr6 (354-444)||(16951615-16951705)
[»] scaffold0906 (1 HSPs)
scaffold0906 (351-963)||(2020-2631)
[»] chr4 (32 HSPs)
chr4 (354-884)||(18760577-18761097)
chr4 (8-149)||(55010504-55010645)
chr4 (195-263)||(55010726-55010794)
chr4 (357-502)||(4995879-4996024)
chr4 (686-933)||(4996214-4996461)
chr4 (282-354)||(55011797-55011869)
chr4 (354-445)||(27659280-27659371)
chr4 (354-445)||(55753336-55753427)
chr4 (354-445)||(24642989-24643080)
chr4 (354-445)||(49510201-49510292)
chr4 (354-444)||(36020959-36021049)
chr4 (357-502)||(19952463-19952608)
chr4 (357-501)||(17920726-17920870)
chr4 (354-493)||(453199-453338)
chr4 (354-493)||(14848037-14848176)
chr4 (354-493)||(21999054-21999193)
chr4 (354-432)||(10748694-10748772)
chr4 (354-432)||(10962463-10962541)
chr4 (354-444)||(30934569-30934659)
chr4 (357-502)||(27190515-27190660)
chr4 (357-502)||(40468061-40468206)
chr4 (357-493)||(16258501-16258637)
chr4 (357-501)||(24025552-24025696)
chr4 (546-614)||(10748886-10748954)
chr4 (546-614)||(10962655-10962723)
chr4 (546-614)||(36020789-36020857)
chr4 (686-753)||(452933-453000)
chr4 (686-753)||(21998788-21998855)
chr4 (684-753)||(40468394-40468463)
chr4 (546-614)||(16258381-16258448)
chr4 (686-753)||(30934907-30934974)
chr4 (684-713)||(27190298-27190327)
[»] scaffold0865 (2 HSPs)
scaffold0865 (354-502)||(4426-4574)
scaffold0865 (686-933)||(4764-5011)
[»] chr5 (52 HSPs)
chr5 (357-531)||(31446060-31446234)
chr5 (354-445)||(14449594-14449685)
chr5 (354-445)||(17727139-17727230)
chr5 (354-445)||(35223692-35223783)
chr5 (354-445)||(36695915-36696006)
chr5 (354-445)||(37732517-37732608)
chr5 (354-444)||(17615282-17615372)
chr5 (354-444)||(31356756-31356846)
chr5 (354-445)||(15766973-15767064)
chr5 (354-445)||(27044789-27044880)
chr5 (357-495)||(40398564-40398702)
chr5 (358-502)||(27605936-27606080)
chr5 (354-444)||(9344170-9344260)
chr5 (354-444)||(23370151-23370241)
chr5 (354-444)||(23704995-23705085)
chr5 (354-444)||(24575288-24575378)
chr5 (354-444)||(24590617-24590707)
chr5 (354-444)||(27468377-27468467)
chr5 (354-444)||(30229982-30230072)
chr5 (354-444)||(36585071-36585161)
chr5 (354-444)||(42050995-42051085)
chr5 (357-502)||(5293066-5293211)
chr5 (354-432)||(6984022-6984100)
chr5 (354-432)||(14038257-14038335)
chr5 (354-444)||(24819431-24819521)
chr5 (354-432)||(39493453-39493531)
chr5 (355-432)||(23304495-23304572)
chr5 (357-493)||(22154718-22154854)
chr5 (546-614)||(22154907-22154975)
chr5 (546-614)||(31841805-31841873)
chr5 (686-753)||(15995557-15995624)
chr5 (546-614)||(6984214-6984282)
chr5 (546-614)||(14449425-14449493)
chr5 (546-614)||(14560439-14560507)
chr5 (356-432)||(14560621-14560697)
chr5 (357-493)||(15995823-15995959)
chr5 (546-614)||(17615474-17615542)
chr5 (546-614)||(22683855-22683923)
chr5 (546-614)||(23304686-23304754)
chr5 (546-614)||(24575480-24575548)
chr5 (546-614)||(24590447-24590515)
chr5 (546-614)||(24819261-24819329)
chr5 (546-614)||(31356948-31357016)
chr5 (357-493)||(31841616-31841752)
chr5 (546-614)||(39493271-39493339)
chr5 (546-614)||(14038449-14038517)
chr5 (546-614)||(23370343-23370411)
chr5 (546-614)||(36584901-36584969)
chr5 (393-444)||(22683702-22683753)
chr5 (678-713)||(27605719-27605754)
chr5 (684-713)||(5292849-5292878)
chr5 (684-713)||(40398897-40398926)
[»] scaffold0747 (2 HSPs)
scaffold0747 (357-531)||(4927-5101)
scaffold0747 (686-862)||(4590-4766)
[»] chr1 (23 HSPs)
chr1 (354-445)||(5835825-5835916)
chr1 (354-445)||(47616045-47616136)
chr1 (354-445)||(3174200-3174291)
chr1 (354-445)||(38097681-38097772)
chr1 (354-445)||(35398651-35398742)
chr1 (354-493)||(12733093-12733232)
chr1 (354-493)||(12743686-12743825)
chr1 (354-444)||(36244569-36244659)
chr1 (355-444)||(51654014-51654103)
chr1 (357-444)||(5647829-5647916)
chr1 (357-502)||(19181468-19181613)
chr1 (355-432)||(7509881-7509958)
chr1 (355-432)||(35646177-35646254)
chr1 (357-493)||(12621278-12621414)
chr1 (546-614)||(12621467-12621535)
chr1 (686-753)||(12732827-12732894)
chr1 (686-753)||(12743420-12743487)
chr1 (546-614)||(7509699-7509767)
chr1 (546-614)||(51654205-51654273)
chr1 (357-493)||(21866228-21866364)
chr1 (684-713)||(4169641-4169670)
chr1 (684-713)||(19181251-19181280)
chr1 (61-94)||(51232732-51232765)
[»] chr7 (28 HSPs)
chr7 (356-445)||(42868494-42868583)
chr7 (354-445)||(1990201-1990292)
chr7 (354-445)||(11007820-11007911)
chr7 (355-445)||(8010247-8010337)
chr7 (354-444)||(26693918-26694008)
chr7 (354-444)||(40050281-40050371)
chr7 (357-493)||(4214612-4214748)
chr7 (354-493)||(465149-465288)
chr7 (354-444)||(2713790-2713880)
chr7 (354-432)||(26398273-26398351)
chr7 (357-502)||(6875393-6875538)
chr7 (357-502)||(9435854-9435999)
chr7 (355-432)||(24737372-24737449)
chr7 (357-493)||(169492-169628)
chr7 (546-614)||(4214491-4214559)
chr7 (357-493)||(8619966-8620102)
chr7 (357-493)||(17958276-17958412)
chr7 (546-614)||(17958465-17958533)
chr7 (549-614)||(169371-169436)
chr7 (546-614)||(8619845-8619913)
chr7 (357-493)||(22091746-22091882)
chr7 (546-614)||(24737190-24737258)
chr7 (546-614)||(26398465-26398533)
chr7 (686-753)||(465487-465554)
chr7 (354-444)||(9087870-9087960)
chr7 (684-713)||(5687906-5687935)
chr7 (684-713)||(6875726-6875755)
chr7 (684-713)||(9435637-9435666)
[»] scaffold0454 (1 HSPs)
scaffold0454 (354-445)||(3944-4035)
[»] scaffold0105 (1 HSPs)
scaffold0105 (354-445)||(45087-45178)
[»] chr8 (21 HSPs)
chr8 (354-445)||(13696697-13696788)
chr8 (354-445)||(36080591-36080682)
chr8 (354-445)||(36295577-36295668)
chr8 (354-444)||(244464-244554)
chr8 (354-444)||(797834-797924)
chr8 (357-493)||(6153689-6153825)
chr8 (354-432)||(3356762-3356840)
chr8 (354-444)||(9343755-9343845)
chr8 (355-432)||(44483781-44483858)
chr8 (546-614)||(3356954-3357022)
chr8 (546-614)||(36295408-36295476)
chr8 (546-614)||(44483599-44483667)
chr8 (357-444)||(15788796-15788883)
chr8 (354-444)||(32085814-32085904)
chr8 (557-614)||(6153567-6153624)
chr8 (546-614)||(9343577-9343645)
chr8 (357-444)||(26113962-26114049)
chr8 (684-753)||(15764992-15765061)
chr8 (684-753)||(15789129-15789198)
chr8 (684-713)||(19131124-19131153)
chr8 (684-713)||(26113687-26113716)
[»] scaffold1216 (1 HSPs)
scaffold1216 (357-525)||(1716-1884)
[»] chr2 (26 HSPs)
chr2 (354-445)||(27224039-27224130)
chr2 (354-445)||(35255616-35255707)
chr2 (354-445)||(35266225-35266316)
chr2 (354-444)||(10269596-10269686)
chr2 (357-502)||(43085268-43085413)
chr2 (354-435)||(43348022-43348103)
chr2 (357-501)||(9905665-9905809)
chr2 (354-432)||(39178208-39178286)
chr2 (357-493)||(4212473-4212609)
chr2 (355-427)||(11403287-11403359)
chr2 (357-493)||(22957814-22957950)
chr2 (546-614)||(22958003-22958071)
chr2 (546-614)||(40224753-40224821)
chr2 (546-614)||(10269426-10269494)
chr2 (546-614)||(27223870-27223938)
chr2 (546-614)||(39178400-39178468)
chr2 (357-493)||(40224874-40225010)
chr2 (357-444)||(24335848-24335935)
chr2 (357-444)||(34798330-34798417)
chr2 (546-614)||(4212353-4212420)
chr2 (357-493)||(9770854-9770990)
chr2 (686-753)||(9771189-9771256)
chr2 (561-614)||(9771058-9771111)
chr2 (684-713)||(29246588-29246617)
chr2 (684-753)||(34798663-34798732)
chr2 (684-713)||(43085051-43085080)
[»] scaffold0133 (2 HSPs)
scaffold0133 (354-435)||(33779-33860)
scaffold0133 (546-614)||(33600-33668)
[»] scaffold0047 (2 HSPs)
scaffold0047 (354-493)||(44873-45012)
scaffold0047 (686-753)||(45211-45278)
[»] scaffold0825 (2 HSPs)
scaffold0825 (684-753)||(4622-4691)
scaffold0825 (357-501)||(4880-5024)
[»] scaffold0009 (2 HSPs)
scaffold0009 (357-493)||(38365-38501)
scaffold0009 (686-753)||(38099-38166)
[»] scaffold0199 (1 HSPs)
scaffold0199 (416-502)||(20978-21064)
[»] scaffold0022 (1 HSPs)
scaffold0022 (684-753)||(51385-51454)
[»] scaffold2119 (1 HSPs)
scaffold2119 (684-753)||(109-178)


Alignment Details
Target: chr3 (Bit Score: 368; Significance: 0; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 368; E-Value: 0
Query Start/End: Original strand, 353 - 884
Target Start/End: Original strand, 10634485 - 10635015
Alignment:
Q  353 ataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaaga 452  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10634485 ataacaagaaatctgaagacagctgagggacgtaaagaacagatgttggaagaactggaagagaactgggatgaggactcaagtcctaagaaagtgaaga 10634584  T
Q  453 agactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagagaa 552  Q
     |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| |||||||     
T  10634585 ggactatcagcactgagcctgaagtcatgcccagttttgaagcatctgagactcaactaaaagaagctgatgagtatgccagaaccagaatttcagagag 10634684  T
Q  553 gaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgatatg 652  Q
    ||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| |||    
T  10634685 gaagaggatgaaggaagtttttgagaaagaaagggaagatcagctcaaggctgcagggtatgagcctgatcctacaattgctgctatggcttctgagatg 10634784  T
Q  653 gaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaag 752  Q
    ||| | ||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  10634785 gaaactattcagcttggagcatctttgctgacacaagctttgaagaataagcaagcttcagaagcatcatcttcagatccttctgcaaaagctccagaag 10634884  T
Q  753 cttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattc 852  Q
    | |||||||||||||| |||| ||||| | ||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||| || |||   ||    
T  10634885 catcttcaaaagctaattcttcaggtacttcatctcaggttccctcttgtactcagactcaaactctacctactccaccctcttcaccttcctcatcatc 10634984  T
Q  853 atccacagaaatctgatggaccaaacctgaac 884  Q
    |||||||| ||||||||| ||| |||||||||    
T  10634985 atccacag-aatctgatgaacctaacctgaac 10635015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 351 - 896
Target Start/End: Complemental strand, 12185229 - 12184695
Alignment:
Q  351 aaataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaa 450  Q
    ||||||| |||||| |||||||||  || ||||| |  || || |||||||||||||| |||||||| || ||| |||||||||||||||||||||| ||    
T  12185229 aaataaccagaaatttgaagacaggagaaggacgcagtgagcagatgctggaagaactagaagagaattgagataaggactcaagtcctaagaaaataaa 12185130  T
Q  451 gaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagag 550  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||||||||| ||||    
T  12185129 gaggactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctgataagtacgccagaaccagaatcttagag 12185030  T
Q  551 aagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgata 650  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  12185029 aagaagaggttgaaggaagtcgtggaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctactcttgctgctatggcttctgttg 12184930  T
Q  651 tggaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcaga 750  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||| | ||||||||||         || ||||    
T  12184929 tggaatccattaagcttggagcatccctgctgactcaagccttgaagaataagcaagctgcaggagcatcatcatcagatcctt---------ctacaga 12184839  T
Q  751 agcttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagat 850  Q
    ||||||||| |||||||  |||| ||||||||||||||||||||||||   |||||||| ||  ||  | ||||||| ||||||||||||||||||||||    
T  12184838 agcttcttctaaagctatttcttcaggtaatacatctcatgttccctcatgtactcagattcctacctttcctactctaccctcttcaccctcatcagat 12184739  T
Q  851 tcatccacagaaatctgatggaccaaacctgaaccaaaaacataga 896  Q
    ||||| |||| ||||||||| ||| |||||||| ||||||||||||    
T  12184738 tcatcaacag-aatctgatgaacctaacctgaa-caaaaacataga 12184695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 351 - 502
Target Start/End: Original strand, 9991355 - 9991506
Alignment:
Q  351 aaataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaa 450  Q
    ||||||| |||||||||||||||||||||||||||||||  || || ||||||||||||| |||||||||||||||||||  |||||||||||||   ||    
T  9991355 aaataaccagaaatctgaagacagctgagggacgtaaagtgcagattctggaagaactggtagagaactgggatgaggacagaagtcctaagaaagcaaa 9991454  T
Q  451 gaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    || ||||| ||| |||||||||||||||||||||||||||||||| ||||||    
T  9991455 gatgactaccagtactgagcctgtagtcatgcccagttttgaagcctctgag 9991506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 88; E-Value: 9e-42
Query Start/End: Original strand, 359 - 502
Target Start/End: Original strand, 6498429 - 6498572
Alignment:
Q  359 agaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagacta 458  Q
    |||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||| ||||||||||  |||||||||||||   |||| |||||    
T  6498429 agaaatctgaagacagctgagggacgtaaagagcagattctggaagaactggtagagaactaggatgaggacagaagtcctaagaaagcaaagatgacta 6498528  T
Q  459 tcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
     ||| |||||||||||||||||||||||||||||||| ||||||    
T  6498529 ccagtactgagcctgtagtcatgcccagttttgaagcttctgag 6498572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 351 - 502
Target Start/End: Original strand, 12245632 - 12245783
Alignment:
Q  351 aaataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaa 450  Q
    ||||||| | |||||||||||||| ||| ||||| |  || || ||||||||||||||||||||||||||||||||||||| ||||||||||| |   ||    
T  12245632 aaataactaaaaatctgaagacaggtgaaggacgcagtgagcagatgctggaagaactggaagagaactgggatgaggacttaagtcctaagagagcaaa 12245731  T
Q  451 gaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    || ||||| ||  |||| |||||||||| |||||||||||||||| ||||||    
T  12245732 gatgactaccaatactgggcctgtagtcttgcccagttttgaagcttctgag 12245783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 686 - 933
Target Start/End: Original strand, 12245973 - 12246220
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagcttct---tcaaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  |  | |||||||||||| ||| |||| |||||||  ||   ||| || ||   |||| |||||||     
T  12245973 caagccttgaagaataagcaagcttcaggagccacttcatcagatccttctacaacagctccagaagcccctcagtcagaacctctttcttcaggtaatc 12246072  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacctga 882  Q
    ||||| ||| |||  |||||||||||| ||  ||  |  || ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  12246073 catctaatgctccaactaatactcagattcctacctttacttctctaccctcttcaccctcatcagattcatccacag-aatctgatgaaccaaacctga 12246171  T
Q  883 accaaaaacatagaatacttccttaaacatcaaccccacgaaactaacaga 933  Q
    | ||||||||| ||  || ||||| |||||||| ||||| |||||||||||    
T  12246172 a-caaaaacatcgataacctcctt-aacatcaaacccactaaactaacaga 12246220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 8777432 - 8777341
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  8777432 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 8777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 18486765 - 18486674
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  18486765 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 18486674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 11280492 - 11280583
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  11280492 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 11280583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 28322330 - 28322421
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  28322330 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 28322421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 357 - 531
Target Start/End: Original strand, 16388968 - 16389142
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||| | ||||| |   | |||||| |||||||  |  |||| ||||||||||| ||||||||||||||||||   |||| |||    
T  16388968 caagaaatctgaagacagcttaaggacgcagttagcaaatgatggaagaggttcaagaaaactgggatgaagactcaagtcctaagaaagcaaagaggac 16389067  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgc 531  Q
    ||  |  | ||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||| |||| |||||    
T  16389068 tactaatattgagcctgtagtcttgcccagatttgaagcttctgaaactcaactgaaagaagctgatgaatatgc 16389142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 39374829 - 39374738
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  39374829 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 39374738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 4746463 - 4746373
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  4746463 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 4746373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 5513416 - 5513326
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  5513416 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 5513326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 5545113 - 5545203
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  5545113 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 5545203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 12294282 - 12294372
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  12294282 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 12294372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 41686408 - 41686318
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  41686408 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 41686318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 19781180 - 19781035
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| ||||||||||| ||||||||||| |||||    || | |||    
T  19781180 caagaaatctgaagacagctgaaggacgaagggaggaaatgttggaagagctgcaagaaaactgggatgaagactcaagtcccaagaaggcaaaaaggac 19781081  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  19781080 tataaattctgagactatagtcatgcccagttttgaagcttctgag 19781035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 355 - 435
Target Start/End: Original strand, 24391597 - 24391677
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaag 435  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| ||||||||    
T  24391597 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaag 24391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 38197515 - 38197423
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctgg-aagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| ||| ||||||||||||||||||||||||| |||||||| |||||||||    
T  38197515 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttgggaagaactggaagagaactgggatgaagactcaagccctaagaaa 38197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 821 - 896
Target Start/End: Original strand, 6498900 - 6498973
Alignment:
Q  821 cctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacctgaaccaaaaacataga 896  Q
    ||||||| |||| |||||||||||||||||||||| |||| ||||||||| |||||||||||| ||||||||||||    
T  6498900 cctactctacccacttcaccctcatcagattcatcaacag-aatctgatgaaccaaacctgaa-caaaaacataga 6498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Complemental strand, 24662614 - 24662536
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  24662614 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 24662536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 5625476 - 5625553
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  5625476 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 5625553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 37869221 - 37869076
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| |||||||| || ||| ||||||| ||||||   || | |||    
T  37869221 caagaaatctgaagacagctgaaggacgcagggaggaaatgttggaagagctgcaagaaaactgggaagaagacacaagtcccaagaaagcaaaaaggac 37869122  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  37869121 tataaatgctgagactatagtcatgcccagttttgaagcttctgag 37869076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 37877739 - 37877594
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| |||||||| || ||| ||||||| ||||||   || | |||    
T  37877739 caagaaatctgaagacagctgaaggacgcagggaggaaatgttggaagagctgcaagaaaactgggaagaagacacaagtcccaagaaagcaaaaaggac 37877640  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  37877639 tataaatgctgagactatagtcatgcccagttttgaagcttctgag 37877594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 356 - 432
Target Start/End: Original strand, 5873795 - 5873871
Alignment:
Q  356 acaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  5873795 acaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 5873871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 14468383 - 14468247
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  14468383 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 14468284  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  14468283 tataacttcagagcctatagtcatgcccagttttgaa 14468247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 24391788 - 24391856
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||||||||||||||| || |  |||||||||||||||||||    
T  24391788 cagaaaagaaaaggttgaaggaagtgtttgaaaaagaaagggatgagcgtctcaaggctgcagggtatg 24391856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 880
Target Start/End: Original strand, 9991696 - 9991892
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagcttct---tcaaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  |  | ||||||| |||| ||| ||||  ||||||  ||   ||| || ||   |||| |||||||     
T  9991696 caagccttgaagaataagcaagcttcaggagccacttcatcagatcattctacaacagctctagaagcacctcagtcagaacctctttcttcaggtaatc 9991795  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacct 880  Q
    ||||| ||| |||  |||||||||||| ||  ||  | ||||||| ||||||||||||||||||||||||||| |||| ||||||||| ||| |||||    
T  9991796 catcttatgctccaactaatactcagattcctacctttcctactctaccctcttcaccctcatcagattcatcaacag-aatctgatgaacctaacct 9991892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 444
Target Start/End: Complemental strand, 13124457 - 13124370
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    
T  13124457 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaa 13124370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 686 - 847
Target Start/End: Original strand, 16389303 - 16389467
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaag---cttcttcaaaagctaactctttaggtaata 782  Q
    |||||| ||||||| ||||||||||||| |||  || | |||||||||||| |||||||| ||||||   ||  |||| || || | ||||||||||||     
T  16389303 caagccctgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagcacctcattcagaacctcattctttaggtaatt 16389402  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatca 847  Q
    ||||| | | ||| ||||||||||||| ||  || || |||| |||||| ||||||| |||||||    
T  16389403 catctaaagctccatctaatactcagattcctacccttcctattccaccttcttcactctcatca 16389467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 4746271 - 4746203
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  4746271 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 4746203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 5625667 - 5625735
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  5625667 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 5625735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 5873985 - 5874053
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  5873985 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 5874053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 12294474 - 12294542
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  12294474 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 12294542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 20681276 - 20681412
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||| ||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    |||| |||    
T  20681276 caaggaatctgaagacagttgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaagaggac 20681375  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| |||||||||||| |||||||    
T  20681376 tataacttcagagcctatagtcatgcccaattttgaa 20681412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 20681465 - 20681533
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| || || ||||||||||| || |  |||||||||||||||||||    
T  20681465 cagagaagaaaaggttgaaggaagtgttcgagaaagaaagggatgagcgtctcaaggctgcagggtatg 20681533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 38197322 - 38197254
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  38197322 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 38197254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 41686216 - 41686148
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  41686216 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 41686148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 16427251 - 16427341
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||| |||||||||||||||||| ||| | |  ||| ||||| || ||||| ||||||| ||||||||||| |||||||| || |||||    
T  16427251 taacaaaaaatctgaagacagctgaaggaaggagggaagaaatgttgaaagaaatggaagaaaactgggatgaagactcaagccccaagaa 16427341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 14468194 - 14468126
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||| | ||||| ||||| ||||| || |  |||||||||||||||||||    
T  14468194 cagagaagaaaaggttgaaggaactgtttgagaaagatagggatgagcgtctcaaggctgcagggtatg 14468126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 23760056 - 23759920
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| |||| |||||| |||||||| || |||||    || | |||    
T  23760056 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactaggatgaagactcaagccccaagaaggcaaaaaggac 23759957  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   ||||| || ||||||||||||||||||||    
T  23759956 tataacttctgagactatagtcatgcccagttttgaa 23759920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 24662422 - 24662354
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| |||||||| || || |  |||||||||||||||||||    
T  24662422 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagagatgagcgtctcaaggctgcagggtatg 24662354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 6218131 - 6218218
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||||| ||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| ||||||||||| ||||||||||| |||||    
T  6218131 caagaaatttgaagacagctgaaggacgaagggaggaaatgttggaagagcttcaagaaaactgggatgaagactcaagtcccaagaa 6218218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 23759721 - 23759654
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||| ||||||||||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  23759721 caagccctgaagaataagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 23759654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 13381094 - 13381163
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  13381094 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 13381163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 13391688 - 13391757
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  13391688 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 13391757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 19780847 - 19780818
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  19780847 cacaagccttgaagaataagcaagcttcag 19780818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 328; Significance: 0; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 328; E-Value: 0
Query Start/End: Original strand, 351 - 933
Target Start/End: Complemental strand, 26024470 - 26023909
Alignment:
Q  351 aaataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaa 450  Q
    ||||||| ||||||||||||||||  || ||||| |  || || ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  26024470 aaataaccagaaatctgaagacaggagaaggacgcagtgagcagatgctggaagaactggaagagaattgggataaggactcaagtcctaagaaaatgaa 26024371  T
Q  451 gaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagag 550  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  26024370 gaggactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctgatgagtatgccagaaccagaatcttagag 26024271  T
Q  551 aagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgata 650  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  26024270 aagaagaggttgaaggaagtcgtggaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctactcttgctgctatggcttctgatg 26024171  T
Q  651 tggaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcaga 750  Q
    ||||||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||| |||||||||||||| |||         |    
T  26024170 tggaatccattaagcttggagcatccctgctgactcaagccttgaagaataagcaagctgcaggagcatcatcttcagatccttctacaa---------a 26024080  T
Q  751 agcttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagat 850  Q
    ||||||||| |||||||| |||| ||||||||||||||||||||||||   ||||||||         | ||||||| ||||||||||||||||||||||    
T  26024079 agcttcttctaaagctaattcttcaggtaatacatctcatgttccctcatgtactcaga---------ttcctactctaccctcttcaccctcatcagat 26023989  T
Q  851 tcatccacagaaatctgatggaccaaacctgaaccaaaaacatagaatacttccttaaacatcaaccccacgaaactaacaga 933  Q
    |||||||||| ||||||||| ||| |||||||| |||||||||||| ||| | | | |||| ||| ||||| |||||||||||    
T  26023988 tcatccacag-aatctgatgaacctaacctgaa-caaaaacatagattacctac-tcaacancaaacccacaaaactaacaga 26023909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 353 - 862
Target Start/End: Complemental strand, 27375508 - 27374999
Alignment:
Q  353 ataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaaga 452  Q
    |||||||||||||||||||||||||| ||||| || |  || ||||||||||| || ||||||||||||||||| |||||||||||||||||| | ||||    
T  27375508 ataacaagaaatctgaagacagctgaaggacgcaaggcgcagatgctggaagagcttgaagagaactgggatgaagactcaagtcctaagaaagtaaaga 27375409  T
Q  453 agactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagagaa 552  Q
     ||||| || |||||||| || |||| ||||||| |||||||| |||||||||||||| |  ||||  ||||||||||| ||||| | |||   ||||||    
T  27375408 ggactaccaacactgagcttgaagtcttgcccagatttgaagcgtctgagactcaactgagcgaagaaaatgagtatgcaagaactaaaattcaagagaa 27375309  T
Q  553 gaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgatatg 652  Q
    ||||||| |||||||| | | |||||| |||||||||||| | |||||||||||||||||||| || ||||||  | |||||||||| | |||||| |||    
T  27375308 gaagaggatgaaggaattgtatgaaaaggaaagggaagataaactcaaggctgcagggtatgagcctgatcctgaaattgctgctatagattctgagatg 27375209  T
Q  653 gaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaag 752  Q
    ||| | ||| ||| ||||||| |  ||||  |||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||| ||||||    
T  27375208 gaaactattcagcgtggagcaactctgctttcacaagccttgaagaataagcaagcttcaggagcatcatcatcagatccttctacaaaagctccagaag 27375109  T
Q  753 ---cttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcaga 849  Q
       || ||||| ||||| | |||| ||||| | ||||||| | ||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||      
T  27375108 cacctccttcagaagctcattcttcaggtatttcatctcaagctccatctaatactcagattcacaccctacctactccaccctcttcaccctcatca-- 27375011  T
Q  850 ttcatccacagaa 862  Q
     ||||||||||||    
T  27375010 -tcatccacagaa 27374999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 353 - 862
Target Start/End: Complemental strand, 27465865 - 27465356
Alignment:
Q  353 ataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaaga 452  Q
    |||||||||||||||||||||||||| ||||| || |  || ||||||||||| || ||||||||||||||||| |||||||||||||||||| | ||||    
T  27465865 ataacaagaaatctgaagacagctgaaggacgcaaggcgcagatgctggaagagcttgaagagaactgggatgaagactcaagtcctaagaaagtaaaga 27465766  T
Q  453 agactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagagaa 552  Q
     ||||| || |||||||| || |||| ||||||| |||||||| |||||||||||||| |  ||||  ||||||||||| ||||| | |||   ||||||    
T  27465765 ggactaccaacactgagcttgaagtcttgcccagatttgaagcgtctgagactcaactgagcgaagaaaatgagtatgcaagaactaaaattcaagagaa 27465666  T
Q  553 gaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgatatg 652  Q
    ||||||| |||||||| | | |||||| |||||||||||| | |||||||||||||||||||| || ||||||  | |||||||||| | |||||| |||    
T  27465665 gaagaggatgaaggaattgtatgaaaaggaaagggaagataaactcaaggctgcagggtatgagcctgatcctgaaattgctgctatagattctgagatg 27465566  T
Q  653 gaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaag 752  Q
    ||| | ||| ||| ||||||| |  ||||  |||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||| ||||||    
T  27465565 gaaactattcagcgtggagcaactctgctttcacaagccttgaagaataagcaagcttcaggagcatcatcatcagatccttctacaaaagctccagaag 27465466  T
Q  753 ---cttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcaga 849  Q
       || ||||| ||||| | |||| ||||| | ||||||| | ||| ||||||||||||| ||| || ||||||||||||||||||||||||||||||      
T  27465465 cacctccttcagaagctcattcttcaggtatttcatctcaagctccatctaatactcagattcacaccctacctactccaccctcttcaccctcatca-- 27465368  T
Q  850 ttcatccacagaa 862  Q
     ||||||||||||    
T  27465367 -tcatccacagaa 27465356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 686 - 896
Target Start/End: Original strand, 22451160 - 22451371
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagcttct---tcaaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| ||| |||| |||||||  ||   ||| || |||  |||| |||||||     
T  22451160 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaatagctccagaagcacctcagtcagaacctatttcttcaggtaatc 22451259  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacctga 882  Q
    ||||| ||| |||  |||||||||||| ||  ||  | ||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  22451260 catctaatgctccaactaatactcagattcctacctttcctactctaccctcttcaccctcatcagattcatcaacag-aatctgatgaaccaaacctga 22451358  T
Q  883 accaaaaacataga 896  Q
    | ||||||||||||    
T  22451359 a-caaaaacataga 22451371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 32309154 - 32309245
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  32309154 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaactggaagagaactgggatgaagactcaagccctaagaaa 32309245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 4633623 - 4633532
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  4633623 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaattggaagagaactgggatgaagactcaagccctaagaaa 4633532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 12724940 - 12725031
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  12724940 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 12725031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 357 - 445
Target Start/End: Original strand, 22450831 - 22450919
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    |||||||||||||||||| ||| ||||| |  || || |||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  22450831 caagaaatctgaagacaggtgaaggacgcagtgagcagatgctggaagaactggaagagaactgggatgaggaaccaagtcctaagaaa 22450919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27344440 - 27344349
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||  ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27344440 taacaagaaatctgaagacaagtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 27344349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27405180 - 27405089
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||  ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27405180 taacaagaaatctgaagacaagtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 27405089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 25790414 - 25790324
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  25790414 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 25790324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 26867502 - 26867412
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    
T  26867502 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaa 26867412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 32970034 - 32970170
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    |||| |||    
T  32970034 caaggaatctgaagacagctgaaggacgaatggcagaaatgttggaagaactggaagataactgggatgaagactcaagccccaagaaggcaaagaggac 32970133  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  32970134 tataacttcagagcctatagtcatgcccagttttgaa 32970170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 3664111 - 3664021
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| | ||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  3664111 taacaagaaatctgaagacagctgaaggaagaagggaagagatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 3664021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Complemental strand, 26028105 - 26028027
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  26028105 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 26028027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 12857446 - 12857378
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  12857446 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 12857378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 12857635 - 12857499
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  12857635 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaacaggac 12857536  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  12857535 tataacttcagagcctatagtcatgcccagttttgaa 12857499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 32970223 - 32970291
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  32970223 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 32970291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 34815440 - 34815508
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  34815440 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 34815508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 34815251 - 34815338
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    
T  34815251 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaa 34815338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 12725132 - 12725200
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  12725132 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 12725200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 25790222 - 25790154
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  25790222 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 25790154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 26027913 - 26027845
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  26027913 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 26027845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 753
Target Start/End: Complemental strand, 12857302 - 12857233
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  12857302 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 12857233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 27477236 - 27477169
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | ||||||||| || | |||||| |||||||    
T  27477236 caagccttgaagaataagcaagcttcaggagccacatcatcagatcctcctaccaaagctccagaagc 27477169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 354 - 425
Target Start/End: Complemental strand, 27477568 - 27477497
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatg 425  Q
    |||| |||||||||||||||||||||||||| ||||| || || ||  || ||||  |||||||||||||||    
T  27477568 taaccagaaatctgaagacagctgagggacgaaaagagcagattctacaaaaacttaaagagaactgggatg 27477497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 16951705 - 16951615
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||| |||||||||||||||||| ||| | |  ||| ||||| || ||||| ||||||| || |||||||| |||||||| || |||||    
T  16951705 taacaaaaaatctgaagacagctgaaggaaggagggaagaaatgttgaaagaaatggaagaaaattgggatgaagactcaagccccaagaa 16951615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0906 (Bit Score: 314; Significance: 1e-176; HSPs: 1)
Name: scaffold0906
Description:

Target: scaffold0906; HSP #1
Raw Score: 314; E-Value: 1e-176
Query Start/End: Original strand, 351 - 963
Target Start/End: Original strand, 2020 - 2631
Alignment:
Q  351 aaataacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaa 450  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2020 aaataaccagaaatctgaagacagctgagggacgtaaagagcaaatactagaagaactggcagagaactgggatgaggactcaagtcctaagaaaatgaa 2119  T
Q  451 gaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagag 550  Q
     | |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||||||||||    
T  2120 aaggactatcaacactgagcctgtagtcatgcccagttttgaagcatctgagattcaactcaaaaaggctgatgagtatgccagaaccagaatctcagag 2219  T
Q  551 aagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgata 650  Q
    ||||||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2220 aagaagaagttgaaggaagtctttgaaaaagaaagagaagatcaactcaaggctgcagggtatgaaccagatcctactcttgctgctatggcttctgata 2319  T
Q  651 tggaatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcaga 750  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||||| ||   |  | |||||||||||| ||| || | ||||    
T  2320 tggaatccattaagcttggagcatccctgctgactcaagccttgaaaaataagcaagcttcaggagtcacttcatcagatccttctacaacaggtccaga 2419  T
Q  751 agcttct---tcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatca 847  Q
    |||  ||   ||| || ||   |||| ||||||| ||||| ||| ||| ||||||||||||| ||  ||  | ||||||||||| |||||||||||||||    
T  2420 agcacctcagtcagaacctctttcttcaggtaatccatctaatgctccatctaatactcagattcctacctttcctactccaccttcttcaccctcatca 2519  T
Q  848 gattcatccacagaaatctgatggaccaaacctgaaccaaaaacatagaatacttccttaaacatcaaccccacgaaactaacagaaattagaacctttt 947  Q
    |||||||| |||  ||||||||| || ||||||||| ||||||||||||  || ||||| |||||||| || || |||||||||| | |||| | | |||    
T  2520 gattcatcaaca-taatctgatgaactaaacctgaa-caaaaacatagataacctcctt-aacatcaaaccaacaaaactaacag-acttaggaaccttt 2615  T
Q  948 gactttgaacagacac 963  Q
    ||||||||||||||||    
T  2616 gactttgaacagacac 2631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 243; Significance: 1e-134; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 354 - 884
Target Start/End: Original strand, 18760577 - 18761097
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    |||| |||||||||||||||||||||||||||||||| || || ||||||||||||| |||||||||||||||||||  |||||||||||||   ||||     
T  18760577 taaccagaaatctgaagacagctgagggacgtaaagagcagattctggaagaactggtagagaactgggatgaggacagaagtcctaagaaagcaaagat 18760676  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgccagaaccagaatctcagagaag 553  Q
     |||| |||   |||||||||||||||||||||||||||||||||||| ||||||||||||||||||   || || || ||||| ||||||| |||||||    
T  18760677 aactaccagtgttgagcctgtagtcatgcccagttttgaagcatctgaaactcaactcaaagaagctgcagaatacgctagaactagaatcttagagaag 18760776  T
Q  554 aagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctacacttgctgctatggcttctgatatgg 653  Q
    ||||||||||| ||| ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||    
T  18760777 aagaggttgaatgaaatcgctgaaaaagaaagggaagatcagctcaaggctgcagggtatgaaccagatcctactcttgctgatatggcttctgatgtgg 18760876  T
Q  654 aatccattaagcctggagcatccttgctgacacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||| |||||||||| ||||||| |||||||||||||||||||||||| ||| ||||||| | ||||||||||         || |||||||    
T  18760877 aatccattaagcttggagcatccctgctgactcaagccttgaagaataagcaagctgcaggagcatcatcatcagatcctt---------ctacagaagc 18760967  T
Q  754 ttcttcaaaagctaactctttaggtaatacatctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattca 853  Q
    |||||| ||||||| | ||| ||||||| ||||| ||| |||  | |||||||||| ||  ||  | |||| || ||| |||||||||||||||||||||    
T  18760968 ttcttctaaagctatcccttcaggtaatccatcttatgctccaacaaatactcagattcctacctttcctaatctaccttcttcaccctcatcagattca 18761067  T
Q  854 tccacagaaatctgatggaccaaacctgaac 884  Q
    || |||| ||||||||| ||| |||||||||    
T  18761068 tcaacag-aatctgatgaacctaacctgaac 18761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 126; E-Value: 2e-64
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 55010504 - 55010645
Alignment:
Q  8 tgtcattcctcgtgatttttgccaatgtgttggcaacaaagacaacaaacaggtatttgagttgcctgatgttgttggaaaaggtttcatgaggttcatt 107  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  55010504 tgtcattcctcgtgatttttgccaatgtgttggaaacaaagacaacaaacaggtatttgagttgcctgatgttgttggaaaaggtttcatgaggtccatt 55010603  T
Q  108 ctccaccgagcaaagggtcatgagagtatgaatgctgactta 149  Q
     |||||| ||||||||||||||||||||||||||||||||||    
T  55010604 ttccaccaagcaaagggtcatgagagtatgaatgctgactta 55010645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 55010726 - 55010794
Alignment:
Q  195 aatttgatcaaatgatacgtatcaaagttatgagaatgacaactaaattgaattattatgttaacacaa 263  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55010726 aatttgatcaaatgatacgtatcaaagttatgagaatgacaactaaattgaattattatgttaacacaa 55010794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 357 - 502
Target Start/End: Original strand, 4995879 - 4996024
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    ||||||||||||||||||  || ||||| |  || || |||||||||||||||||||||||||||||| |||||||||||||||||| |   |||| |||    
T  4995879 caagaaatctgaagacaggagaaggacgcagtgagcagatgctggaagaactggaagagaactgggataaggactcaagtcctaagagagcaaagatgac 4995978  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    || ||  |||| || ||||||| |||||||||||||||| ||||||    
T  4995979 taccaatactgggcatgtagtcctgcccagttttgaagcttctgag 4996024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 686 - 933
Target Start/End: Original strand, 4996214 - 4996461
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagcttct---tcaaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| ||| |||| |||||||  ||   ||| || ||   |||| |||||||     
T  4996214 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaatagctccagaagcacctcagtcagaacctttttcttcaggtaatc 4996313  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacctga 882  Q
    ||||| ||| |||  | |||||||||| ||  ||  | ||||||| ||||||||||||||||||||||||||| |||| ||||||||| |||||||||||    
T  4996314 catctaatgctccaaccaatactcagattcctacctttcctactctaccctcttcaccctcatcagattcatcaacag-aatctgatgaaccaaacctga 4996412  T
Q  883 accaaaaacatagaatacttccttaaacatcaaccccacgaaactaacaga 933  Q
    | ||||||||||| ||| |  | | |||||||| ||||| |||||||||||    
T  4996413 a-caaaaacatag-ataatctcctcaacatcaaacccactaaactaacaga 4996461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 55011797 - 55011869
Alignment:
Q  282 attgtcacaaacgcataatttcagcttaaaagtcaaatttgactttttgtttataaaattgcgcaaagtaaat 354  Q
    |||||||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55011797 attgtcacaaacacataatttcagattaaaagtcaaatttaactttttgtttataaaattgcgcaaagtaaat 55011869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27659371 - 27659280
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27659371 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 27659280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 55753336 - 55753427
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  55753336 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 55753427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 24643080 - 24642989
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  24643080 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 24642989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 49510292 - 49510201
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  49510292 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 49510201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 36021049 - 36020959
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  36021049 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 36020959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 357 - 502
Target Start/End: Original strand, 19952463 - 19952608
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  ||  ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  19952463 caaggaatctgaagacagctgaaggacgaagggaggaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 19952562  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  19952563 tataacttctgagactatagtcatgcccagttttgaagcttctgag 19952608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 501
Target Start/End: Complemental strand, 17920870 - 17920726
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  17920870 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 17920771  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctga 501  Q
    ||| |   ||||| || |||||||||||||||||||||| |||||    
T  17920770 tataacttctgagactatagtcatgcccagttttgaagcttctga 17920726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 493
Target Start/End: Complemental strand, 453338 - 453199
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |     
T  453338 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaag 453239  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  453238 gactataacttctgagactatagtcatgcccagttttgaa 453199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 493
Target Start/End: Original strand, 14848037 - 14848176
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |     
T  14848037 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaag 14848136  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  14848137 gactataacttctgagactatagtcatgcccagttttgaa 14848176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 493
Target Start/End: Complemental strand, 21999193 - 21999054
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |     
T  21999193 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaag 21999094  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  21999093 gactataacttctgagactatagtcatgcccagttttgaa 21999054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 10748694 - 10748772
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  10748694 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 10748772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 10962463 - 10962541
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  10962463 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 10962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 30934569 - 30934659
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    
T  30934569 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaa 30934659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 27190660 - 27190515
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| |||||||| || |||||||||||||| ||    || | |||    
T  27190660 caagaaatctgaagacagctgaaggacgaagggaggaaatgttggaagagctgcaagaaaactgggaagaagactcaagtcctaataaggcaaaaaggac 27190561  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  27190560 tataaattctgagactatagtcatgcccagttttgaagcttctgag 27190515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Original strand, 40468061 - 40468206
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| |||||||| || || |||||||| ||||||   || |||||    
T  40468061 caagaaatctgaagacagctgaaggacgcagggaggaaatgatggaagagcttcaagaaaactgggaagaagagtcaagtcccaagaaagccaaaaagac 40468160  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    |||    |||| |||| |||||||||||||||||||||| ||||||    
T  40468161 tattcatactgggcctatagtcatgcccagttttgaagcttctgag 40468206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 16258637 - 16258501
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  16258637 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 16258538  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  16258537 tataacttcagagcctatagtcatgcccagttttgaa 16258501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 501
Target Start/End: Original strand, 24025552 - 24025696
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  24025552 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 24025651  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctga 501  Q
    ||| |   ||||| || ||||||||||||||||| |||| |||||    
T  24025652 tataacttctgagactatagtcatgcccagttttaaagcttctga 24025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 10748886 - 10748954
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  10748886 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 10748954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 10962655 - 10962723
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  10962655 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 10962723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 36020857 - 36020789
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  36020857 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 36020789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 453000 - 452933
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||| ||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  453000 caagccctgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 452933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 21998855 - 21998788
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||| ||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  21998855 caagccctgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 21998788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 40468394 - 40468463
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||||| |||  |  ||||||| ||| || |||||||| |||||||    
T  40468394 cacaagccttgaagaataagcaagcttcaggagccacttcttcagaacctgcttcaaaagctccagaagc 40468463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 16258448 - 16258381
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||| ||||||| || |  |||||||||||||||||||    
T  16258448 cagagaagaaaaggttgaaggaagtgtttgagaaa-aaagggatgagcgtctcaaggctgcagggtatg 16258381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Original strand, 30934907 - 30934974
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||| ||||||||||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  30934907 caagccctgaagaataagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 30934974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 27190327 - 27190298
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  27190327 cacaagccttgaagaataagcaagcttcag 27190298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 81; Significance: 1e-37; HSPs: 2)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 354 - 502
Target Start/End: Original strand, 4426 - 4574
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    |||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||||||||||||||| |||  |||||||||||||   ||||     
T  4426 taaccagaaatctgaagacagctgagggacgtaaagagcagatactggaagaactggaagagaactgggatgaagacagaagtcctaagaaagcaaagat 4525  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||||| ||  |||| |||||||||| |||||||||||||||| ||||||    
T  4526 gactaccaatactgggcctgtagtcctgcccagttttgaagcttctgag 4574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 686 - 933
Target Start/End: Original strand, 4764 - 5011
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagcttctt---caaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| ||| |||| |||||||  ||    || || |||  |||| |||||||     
T  4764 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaatagctccagaagcacctcagacagaacctatttcttcaggtaatc 4863  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaaatctgatggaccaaacctga 882  Q
    ||||| ||| |||  |||||||||||| ||  ||  | ||||||| ||||||||||||||||| ||||||||| |||| ||||||||| |||||||||||    
T  4864 catctaatgctccaactaatactcagattcctacctttcctactctaccctcttcaccctcattagattcatcaacag-aatctgatgaaccaaacctga 4962  T
Q  883 accaaaaacatagaatacttccttaaacatcaaccccacgaaactaacaga 933  Q
    | ||||||||||||  || ||| | |||| ||| ||||| |||||||||||    
T  4963 a-caaaaacatagataacctcc-tcaacaccaaacccacaaaactaacaga 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 1e-31; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 357 - 531
Target Start/End: Original strand, 31446060 - 31446234
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  || |||||| ||||||| ||  |||| ||||||||||| ||||||||||||||||||   |||| |||    
T  31446060 caagaaatctgaagacagctgaaggacgcagtgagcaaatgatggaagagcttcaagaaaactgggatgaagactcaagtcctaagaaagcaaagaggac 31446159  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgc 531  Q
    ||  |  ||||||||||||||| ||||||| |||||||| ||||| |||||||| ||||||||| |||| |||||    
T  31446160 tactaatactgagcctgtagtcttgcccagatttgaagcttctgaaactcaactgaaagaagctgatgaatatgc 31446234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 14449685 - 14449594
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  14449685 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 14449594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 17727139 - 17727230
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  17727139 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaactggaagagaactgggatgaagactcaagccctaagaaa 17727230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 35223692 - 35223783
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  35223692 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 35223783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 36695915 - 36696006
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | |||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  36695915 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaactggaagagaactgggatgaagactcaagccctaagaaa 36696006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 37732608 - 37732517
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  37732608 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 37732517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 17615282 - 17615372
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  17615282 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaactgaaagagaactgggatgaagactcaagccctaagaa 17615372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 31356756 - 31356846
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  31356756 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaactgaaagagaactgggatgaagactcaagccctaagaa 31356846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 15766973 - 15767064
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  15766973 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 15767064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27044880 - 27044789
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27044880 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 27044789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 357 - 495
Target Start/End: Original strand, 40398564 - 40398702
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  ||| ||||| ||||||||||| |||| ||||||||||| ||||||||||| |||||    || |||||    
T  40398564 caaggaatctgaagacagctgaaggacgaagggaagaaatgttggaagaactgcaagaaaactgggatgaagactcaagtcccaagaaggcaaaaaagac 40398663  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagc 495  Q
    ||| |   ||||| || ||||||||||||||||||||||    
T  40398664 tataacttctgagactatagtcatgcccagttttgaagc 40398702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 358 - 502
Target Start/End: Complemental strand, 27606080 - 27605936
Alignment:
Q  358 aagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagact 457  Q
    ||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| |||||||| || ||||||||||| ||||||   || | ||||    
T  27606080 aagaaatctgaagacagctgaaggacgcagggaggaaatgttggaagagctgcaagaaaactgggaagaagactcaagtcccaagaaagcaaaaaggact 27605981  T
Q  458 atcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    || |  |||||| || |||||||||||||||||||||| ||||||    
T  27605980 ataaatactgagactatagtcatgcccagttttgaagcttctgag 27605936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 9344170 - 9344260
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  9344170 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 9344260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 23370151 - 23370241
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  23370151 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 23370241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 23704995 - 23705085
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  23704995 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 23705085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 24575288 - 24575378
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  24575288 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 24575378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 24590707 - 24590617
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  24590707 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 24590617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 27468377 - 27468467
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  27468377 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 27468467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 30230072 - 30229982
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  30230072 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 30229982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 36585161 - 36585071
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  36585161 taacaagaaatctgaagacagctgaaggaagaagggaataaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 36585071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 42050995 - 42051085
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  42050995 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 42051085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 5293211 - 5293066
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| |||||||| || || |||||||||||||||   ||||  ||    
T  5293211 caagaaatctgaagacagctgaaggacgcagggaggaaatgatggaagagcttcaagataactgggaagaagagtcaagtcctaagaaagcaaagagaac 5293112  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    |||    ||||||||| |||||||||||||||||||||| ||||||    
T  5293111 tattcatactgagcctttagtcatgcccagttttgaagcttctgag 5293066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 6984022 - 6984100
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  6984022 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 6984100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 14038257 - 14038335
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  14038257 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 14038335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 24819521 - 24819431
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||| ||| || |||||    
T  24819521 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactgaagccccaagaa 24819431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Complemental strand, 39493531 - 39493453
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  39493531 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 39493453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 23304495 - 23304572
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  23304495 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 23304572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 22154718 - 22154854
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  22154718 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 22154817  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  22154818 tataacttcagagcctatagtcatgcccagttttgaa 22154854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 22154907 - 22154975
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  22154907 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 22154975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 31841805 - 31841873
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  31841805 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 31841873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 15995624 - 15995557
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  15995624 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 15995557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 6984214 - 6984282
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  6984214 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 6984282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 14449493 - 14449425
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  14449493 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 14449425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 14560507 - 14560439
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  14560507 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 14560439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 432
Target Start/End: Complemental strand, 14560697 - 14560621
Alignment:
Q  356 acaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||| ||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  14560697 acaagtaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 14560621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 15995959 - 15995823
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  15995959 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 15995860  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   ||||| || ||||||||||||||||||||    
T  15995859 tataacttctgagactatagtcatgcccagttttgaa 15995823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 17615474 - 17615542
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  17615474 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgaacgtctcaaggctgcagggtatg 17615542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 22683855 - 22683923
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  22683855 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 22683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 23304686 - 23304754
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  23304686 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 23304754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 24575480 - 24575548
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  24575480 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 24575548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 24590515 - 24590447
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  24590515 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 24590447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 24819329 - 24819261
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  24819329 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 24819261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 31356948 - 31357016
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  31356948 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgaacgtctcaaggctgcagggtatg 31357016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 31841616 - 31841752
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  31841616 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 31841715  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  31841716 tataacttcagagcctatagtcatgcccagttttgaa 31841752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 39493339 - 39493271
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  39493339 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 39493271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 14038449 - 14038517
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| |||||||| || || |  |||||||||||||||||||    
T  14038449 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagagatgagcgtctcaaggctgcagggtatg 14038517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 23370343 - 23370411
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||| | ||||| ||||| ||||| || |  |||||||||||||||||||    
T  23370343 cagagaagaaaaggttgaaggaactgtttgagaaagatagggatgagcgtctcaaggctgcagggtatg 23370411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 36584969 - 36584901
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||| | ||||| ||||| ||||| || |  |||||||||||||||||||    
T  36584969 cagagaagaaaaggttgaaggaactgtttgagaaagatagggatgagcgtctcaaggctgcagggtatg 36584901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 444
Target Start/End: Original strand, 22683702 - 22683753
Alignment:
Q  393 aaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  22683702 aaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 22683753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 678 - 713
Target Start/End: Complemental strand, 27605754 - 27605719
Alignment:
Q  678 tgctgacacaagccttgaagaataagcaagcttcag 713  Q
    ||||| ||||||||||||||||||||||||||||||    
T  27605754 tgctgtcacaagccttgaagaataagcaagcttcag 27605719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 5292878 - 5292849
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  5292878 cacaagccttgaagaataagcaagcttcag 5292849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Original strand, 40398897 - 40398926
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  40398897 cacaagccttgaagaataagcaagcttcag 40398926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747 (Bit Score: 63; Significance: 7e-27; HSPs: 2)
Name: scaffold0747
Description:

Target: scaffold0747; HSP #1
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 357 - 531
Target Start/End: Complemental strand, 5101 - 4927
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||| ||| ||||| |  || || ||| ||||||||||  |||||||||||||||| ||||||||||||||||||   |||| |||    
T  5101 caagaaatctgaagacaggtgaaggacgcagtgagcagatgttggaagaacttcaagagaactgggatgaagactcaagtcctaagaaagctaagaggac 5002  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatgagtatgc 531  Q
    || ||  |||| |||||||||| ||||||| |||||||| ||||||  |||| | | |||||||||||| |||||    
T  5001 taccaatactgggcctgtagtcttgcccaggtttgaagcttctgaggatcaattgagagaagctaatgaatatgc 4927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0747; HSP #2
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 862
Target Start/End: Complemental strand, 4766 - 4590
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaag---cttcttcaaaagctaactctttaggtaata 782  Q
    |||||||||||||||||||||||||||| |||  || ||||| |||||||| |||||||| || |||   ||  |||| || || | |||| |||||||     
T  4766 caagccttgaagaataagcaagcttcaggagccacatcttcaaatccttctacaaaagctccaaaagcacctcattcagaacctcattcttcaggtaatt 4667  T
Q  783 catctcatgttccctctaatactcagactcaaactctacctactccaccctcttcaccctcatcagattcatccacagaa 862  Q
    ||||| | | ||| ||||||||||||| ||  || || ||||||| ||| |||||||| ||||||   ||||||||||||    
T  4666 catctaaagctccatctaatactcagattcctacccttcctactctaccatcttcaccttcatca---tcatccacagaa 4590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 4e-25; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 5835916 - 5835825
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  5835916 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 5835825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 47616045 - 47616136
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  47616045 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 47616136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 3174291 - 3174200
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  3174291 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 3174200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 38097772 - 38097681
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  38097772 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 38097681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 35398651 - 35398742
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  35398651 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 35398742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 493
Target Start/End: Complemental strand, 12733232 - 12733093
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| ||||||||    || |     
T  12733232 taacaagaaatctgaagacagctgaaggacgaatggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccctaagaaggcaaaaag 12733133  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  12733132 gactataacttctgagactatagtcatgcccagttttgaa 12733093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 354 - 493
Target Start/End: Complemental strand, 12743825 - 12743686
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| ||||||||    || |     
T  12743825 taacaagaaatctgaagacagctgaaggacgaatggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccctaagaaggcaaaaag 12743726  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  12743725 gactataacttctgagactatagtcatgcccagttttgaa 12743686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 36244569 - 36244659
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  36244569 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 36244659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 355 - 444
Target Start/End: Original strand, 51654014 - 51654103
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  51654014 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 51654103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 5647829 - 5647916
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  ||  ||||| |||||||||||||||| |||||||| |||||||||||||| |||||    
T  5647829 caaggaatctgaagacagctgaaggacgaagggaggaaatgttggaagaactggaagaaaactgggaagaggactcaagtcccaagaa 5647916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 19181613 - 19181468
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| |||||||| || || |||||||||||||||   ||||  ||    
T  19181613 caagaaatctgaagacagctgaaggacgcagggaggaaatgatggaagagcttcaagataactgggaagaagagtcaagtcctaagaaagcaaagagaac 19181514  T
Q  457 ta-tcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    || |||| |||||| || |||||||||||||||||||||| ||||||    
T  19181513 tattcag-actgagactatagtcatgcccagttttgaagcttctgag 19181468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 7509958 - 7509881
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  7509958 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 7509881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 35646177 - 35646254
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  35646177 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 35646254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 12621278 - 12621414
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  12621278 caagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 12621377  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  12621378 tataacttcagagcctatagtcatgcccagttttgaa 12621414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 12621467 - 12621535
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  12621467 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 12621535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 12732894 - 12732827
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  12732894 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 12732827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 12743487 - 12743420
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  12743487 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 12743420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 7509767 - 7509699
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  7509767 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 7509699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 51654205 - 51654273
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  51654205 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 51654273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 21866364 - 21866228
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||| | ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  21866364 caaggaatctgaagacagctaaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 21866265  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
     || |   |||||||| ||||||||||||||||||||    
T  21866264 aataacttctgagcctatagtcatgcccagttttgaa 21866228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 4169670 - 4169641
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  4169670 cacaagccttgaagaataagcaagcttcag 4169641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 19181280 - 19181251
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  19181280 cacaagccttgaagaataagcaagcttcag 19181251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 51232765 - 51232732
Alignment:
Q  61 tatttgagttgcctgatgttgttggaaaaggttt 94  Q
    |||||||||||||||||||| |||||||||||||    
T  51232765 tatttgagttgcctgatgttcttggaaaaggttt 51232732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 7e-24; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 356 - 445
Target Start/End: Complemental strand, 42868583 - 42868494
Alignment:
Q  356 acaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||| ||| | |  ||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  42868583 acaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagaactggaagagaactgggatgaagactcaagccctaagaaa 42868494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 1990292 - 1990201
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  1990292 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagagctggaagagaactgggatgaagactcaagccctaagaaa 1990201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 11007911 - 11007820
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  11007911 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 11007820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 355 - 445
Target Start/End: Original strand, 8010247 - 8010337
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| |||||||||    
T  8010247 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccctaagaaa 8010337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 26693918 - 26694008
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  26693918 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 26694008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 40050281 - 40050371
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  40050281 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 40050371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 4214748 - 4214612
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    |||| |||    
T  4214748 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagataactgggatgaagactcaagccccaagaaggcaaagaggac 4214649  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  4214648 tataacttcagagcctatagtcatgcccagttttgaa 4214612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 493
Target Start/End: Original strand, 465149 - 465288
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |     
T  465149 taacaagaaatctgaagacagctgaaggacgaagggcaaaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaag 465248  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  465249 gactataacttctgagactatagtcatgcccagttttgaa 465288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 2713790 - 2713880
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    
T  2713790 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaa 2713880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 26398273 - 26398351
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  26398273 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 26398351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Original strand, 6875393 - 6875538
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||| |||| |||||||| || ||||||||||| |||||    || | |||    
T  6875393 caagaaatctgaagacagctgaaggacgaagggaggaaatgttggaagagctgcaagaaaactgggaagaagactcaagtcccaagaaggcaaaaaggac 6875492  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||| |   ||||| || |||||||||||||||||||||| ||||||    
T  6875493 tataaattctgagactatagtcatgcccagttttgaagcttctgag 6875538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 9435999 - 9435854
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| |||||||| || || |||||||||||||||   ||||  ||    
T  9435999 caagaaatctgaagacagctgaaggacgcagggaggaaatgatggaagagcttcaagataactgggaagaagagtcaagtcctaagaaagcaaagagaac 9435900  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    |||    |||||| || |||||||||||||||||||||| ||||||    
T  9435899 tattcatactgagactatagtcatgcccagttttgaagcttctgag 9435854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 24737449 - 24737372
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  24737449 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 24737372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 169628 - 169492
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  169628 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 169529  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  169528 tataacttcagagcctatagtcatgcccagttttgaa 169492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 4214559 - 4214491
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  4214559 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 4214491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 8620102 - 8619966
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  ||| ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  8620102 caaggaatctgaagacagctgaaggacgaagggaagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 8620003  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  8620002 tataacttcagagcctatagtcatgcccagttttgaa 8619966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 17958276 - 17958412
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  17958276 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 17958375  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   |||||||| ||||||||||||||||||||    
T  17958376 tataacttctgagcctatagtcatgcccagttttgaa 17958412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 17958465 - 17958533
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  17958465 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 17958533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 549 - 614
Target Start/End: Complemental strand, 169436 - 169371
Alignment:
Q  549 agaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    ||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  169436 agaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 169371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 8619913 - 8619845
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||| ||||||    
T  8619913 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcatggtatg 8619845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 22091882 - 22091746
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  22091882 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 22091783  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
     || |   |||||||| ||||||||||||||||||||    
T  22091782 aataacttctgagcctatagtcatgcccagttttgaa 22091746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 24737258 - 24737190
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  24737258 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 24737190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 26398465 - 26398533
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  26398465 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 26398533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 686 - 753
Target Start/End: Original strand, 465487 - 465554
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  465487 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 465554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 9087960 - 9087870
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||| |||||||||||||||||| ||| | |  ||| ||||| || ||||| ||||||| || |||||||| |||||||| || |||||    
T  9087960 taacaaaaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaaatggaagaaaattgggatgaagactcaagccccaagaa 9087870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 5687935 - 5687906
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  5687935 cacaagccttgaagaataagcaagcttcag 5687906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Original strand, 6875726 - 6875755
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  6875726 cacaagccttgaagaataagcaagcttcag 6875755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 9435666 - 9435637
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  9435666 cacaagccttgaagaataagcaagcttcag 9435637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 4035 - 3944
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | |||||||||||||||| ||||||||||||||||||| |||||||| |||||||||    
T  4035 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgctggaagaattggaagagaactgggatgaagactcaagccctaagaaa 3944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 56; Significance: 1e-22; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 45087 - 45178
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  45087 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 45178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 1e-22; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Original strand, 13696697 - 13696788
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  13696697 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 13696788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 36080682 - 36080591
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  ||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  36080682 taacaagaaatctgaagacagctgaaggaagaagggaacaaatgatggaagagctggaagagaactgggatgaagactcaagccctaagaaa 36080591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 36295668 - 36295577
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||||||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  36295668 taacaagaaatctgaagacagctgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 36295577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 244554 - 244464
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  244554 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 244464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 797924 - 797834
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  797924 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 797834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 6153825 - 6153689
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    |||| |||    
T  6153825 caaggaatctgaagacagctgaaggacgaatggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaagaggac 6153726  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  6153725 tataacttcagagcctatagtcatgcccagttttgaa 6153689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 3356762 - 3356840
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  3356762 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 3356840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 9343845 - 9343755
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||| ||||||||||||||||||| |||||||| || |||||    
T  9343845 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaaatggaagagaactgggatgaagactcaagccccaagaa 9343755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 355 - 432
Target Start/End: Complemental strand, 44483858 - 44483781
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  44483858 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 44483781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 3356954 - 3357022
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  3356954 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 3357022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 36295476 - 36295408
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  36295476 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 36295408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 44483667 - 44483599
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  44483667 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 44483599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 15788796 - 15788883
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    
T  15788796 caaggaatctgaagacagctgaaggacgaagggcataaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaa 15788883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 354 - 444
Target Start/End: Original strand, 32085814 - 32085904
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||| |||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||| || |||||||| |||||||| || |||||    
T  32085814 taacaaaaaatctgaagacagctgaaggaaggagggaagaaatgttgaaagaactggaagaaaattgggatgaagactcaagccccaagaa 32085904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 614
Target Start/End: Complemental strand, 6153624 - 6153567
Alignment:
Q  557 aggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  6153624 aggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 6153567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 9343645 - 9343577
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| |||||||| || || |  |||||||||||||||||||    
T  9343645 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagagatgagcgtctcaaggctgcagggtatg 9343577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 444
Target Start/End: Complemental strand, 26114049 - 26113962
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||||||| ||||||||||||| ||||| |  ||  ||||| ||||||| ||  |||| ||||||||||| ||||||||||| |||||    
T  26114049 caagaaatttgaagacagctgaaggacgaagggaggaaatgttggaagagcttcaagaaaactgggatgaagactcaagtcccaagaa 26113962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 15764992 - 15765061
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  15764992 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 15765061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 15789129 - 15789198
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  15789129 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 15789198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 19131153 - 19131124
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  19131153 cacaagccttgaagaataagcaagcttcag 19131124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 26113716 - 26113687
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  26113716 cacaagccttgaagaataagcaagcttcag 26113687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1216 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold1216
Description:

Target: scaffold1216; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 357 - 525
Target Start/End: Complemental strand, 1884 - 1716
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| ||||| || ||  ||||| ||||||| ||  |||| ||||||||||| ||||| ||||||||||||   ||||  ||    
T  1884 caagaaatctgaagacagctgaaggacgcaaggagaaaatgatggaagagcttcaagaaaactgggatgaagactctagtcctaagaaagcaaagagaac 1785  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgagactcaactcaaagaagctaatga 525  Q
    ||  |  |||| |||||||||| ||||||| |||||||| |||||| ||||||| | ||||||| ||||    
T  1784 tactaatactgggcctgtagtcttgcccaggtttgaagcttctgaggctcaactgagagaagctgatga 1716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 3e-20; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 27224130 - 27224039
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  27224130 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 27224039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 35255707 - 35255616
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  35255707 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 35255616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 354 - 445
Target Start/End: Complemental strand, 35266316 - 35266225
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaa 445  Q
    ||||||||||||||||||||| ||| ||| | |  | ||||||| |||||||||||||||||||||||||||| |||||||| |||||||||    
T  35266316 taacaagaaatctgaagacaggtgaaggaagaagggcacaaatgttggaagaactggaagagaactgggatgaagactcaagccctaagaaa 35266225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 354 - 444
Target Start/End: Complemental strand, 10269686 - 10269596
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||||| || |||||    
T  10269686 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaagccccaagaa 10269596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 357 - 502
Target Start/End: Complemental strand, 43085413 - 43085268
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||||||||||||||||||||| |||||||  ||  ||||| ||||||| ||  |||| |||||||| || || |||||||||||||||   ||||  ||    
T  43085413 caagaaatctgaagacagctgaaggacgtagggaggaaatgatggaagagcttcaagataactgggaagaagagtcaagtcctaagaaagcaaagagaac 43085314  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    |||    |||||| || |||||||||||||||||||||| ||||||    
T  43085313 tattcaaactgagactatagtcatgcccagttttgaagcttctgag 43085268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 435
Target Start/End: Complemental strand, 43348103 - 43348022
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaag 435  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| ||||||||    
T  43348103 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaag 43348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 357 - 501
Target Start/End: Original strand, 9905665 - 9905809
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  9905665 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 9905764  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctga 501  Q
    ||| |   ||||| || |||||||||||||||||||||| |||||    
T  9905765 tataacttctgagactatagtcatgcccagttttgaagcttctga 9905809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 354 - 432
Target Start/End: Original strand, 39178208 - 39178286
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactc 432  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| |||||    
T  39178208 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactc 39178286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 4212609 - 4212473
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  4212609 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 4212510  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  4212509 tataacttcagagcctatagtcatgcccagttttgaa 4212473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 355 - 427
Target Start/End: Original strand, 11403287 - 11403359
Alignment:
Q  355 aacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgag 427  Q
    |||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||||    
T  11403287 aacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgag 11403359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 22957814 - 22957950
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  22957814 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 22957913  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  22957914 tataacttcagagcctatagtcatgcccagttttgaa 22957950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 22958003 - 22958071
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  22958003 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 22958071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 40224821 - 40224753
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  40224821 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 40224753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 10269494 - 10269426
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  10269494 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 10269426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 27223938 - 27223870
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  27223938 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 27223870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Original strand, 39178400 - 39178468
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  39178400 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 39178468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 40225010 - 40224874
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |||||    
T  40225010 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaagac 40224911  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| |||||||||| |||||||||    
T  40224910 tataacttcagagcctatagtcatgcctagttttgaa 40224874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 24335848 - 24335935
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  ||  ||||| |||||||||| ||||| ||||||||||| |||||||| || |||||    
T  24335848 caaggaatctgaagacagctgaaggacgaatggaggaaatgttggaagaactagaagaaaactgggatgaagactcaagccccaagaa 24335935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 357 - 444
Target Start/End: Original strand, 34798330 - 34798417
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaa 444  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    
T  34798330 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaa 34798417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 4212420 - 4212353
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| |||||||||||||| ||||| ||||||||||| || |  ||||||| |||||||||||    
T  4212420 cagagaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagc-tctcaaggttgcagggtatg 4212353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 357 - 493
Target Start/End: Original strand, 9770854 - 9770990
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||| | |||||||| || |||||    || | |||    
T  9770854 caaggaatctgaagacagctgaaggacgaatggcagaaatgttggaagaattggaagaaaactgggataaagactcaagccccaagaaggcaaaaaggac 9770953  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   | |||||| ||||||||||||||||||||    
T  9770954 tataacttcagagcctatagtcatgcccagttttgaa 9770990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Original strand, 9771189 - 9771256
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||| ||||||||||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  9771189 caagccctgaagaataagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 9771256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 561 - 614
Target Start/End: Original strand, 9771058 - 9771111
Alignment:
Q  561 tgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  9771058 tgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 9771111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 29246617 - 29246588
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  29246617 cacaagccttgaagaataagcaagcttcag 29246588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 34798663 - 34798732
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||| |||||||| ||||||||||||| |||  || | |||||||||||| |||| ||| |||||||    
T  34798663 cacaagctttgaagaacaagcaagcttcaggagccacatcatcagatccttctacaaatgctccagaagc 34798732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 713
Target Start/End: Complemental strand, 43085080 - 43085051
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcag 713  Q
    ||||||||||||||||||||||||||||||    
T  43085080 cacaagccttgaagaataagcaagcttcag 43085051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 46; Significance: 1e-16; HSPs: 2)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 354 - 435
Target Start/End: Complemental strand, 33860 - 33779
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaag 435  Q
    ||||||||||||||||||||||||| ||| | |  ||| ||||| || ||||||||||||||||||||||||| ||||||||    
T  33860 taacaagaaatctgaagacagctgaaggaagaagggaagaaatgttgaaagaactggaagagaactgggatgaagactcaag 33779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 546 - 614
Target Start/End: Complemental strand, 33668 - 33600
Alignment:
Q  546 cagagaagaagaggttgaaggaagtctttgaaaaagaaagggaagatcagctcaaggctgcagggtatg 614  Q
    |||| ||||| |||||||||||||| ||||| ||||||||||| || |  |||||||||||||||||||    
T  33668 cagaaaagaaaaggttgaaggaagtgtttgagaaagaaagggatgagcgtctcaaggctgcagggtatg 33600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 354 - 493
Target Start/End: Original strand, 44873 - 45012
Alignment:
Q  354 taacaagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaa 453  Q
    ||||||||||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || |     
T  44873 taacaagaaatctgaagacagctgaaggacgaagggcagaaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaag 44972  T
Q  454 gactatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    |||||| |   ||||| || ||||||||||||||||||||    
T  44973 gactataacttctgagactatagtcatgcccagttttgaa 45012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Original strand, 45211 - 45278
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||| | |||| ||| |||||||    
T  45211 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttttacaaatgctccagaagc 45278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 684 - 753
Target Start/End: Complemental strand, 4691 - 4622
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||||| |||  || | |||||||||||| |||||||| |||||||    
T  4691 cacaagccttgaagaataagcaagcttcaggagccacatcatcagatccttctacaaaagctccagaagc 4622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825; HSP #2
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 501
Target Start/End: Complemental strand, 5024 - 4880
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||||||||||| ||||||||||| |||||||| || |||||    || | |||    
T  5024 caaggaatctgaagacagctgaaggacgaagggcagaaatgttggaagaactggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 4925  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaagcatctga 501  Q
    ||| |   ||||| || ||||||||||||||||| |||| |||||    
T  4924 tataacttctgagactatagtcatgcccagttttaaagcttctga 4880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 357 - 493
Target Start/End: Complemental strand, 38501 - 38365
Alignment:
Q  357 caagaaatctgaagacagctgagggacgtaaagaacaaatgctggaagaactggaagagaactgggatgaggactcaagtcctaagaaaatgaagaagac 456  Q
    |||| ||||||||||||||||| ||||| |  | | ||||| |||||||| ||||||| ||||||||||| |||||||| || |||||    || | |||    
T  38501 caaggaatctgaagacagctgaaggacgaagggcataaatgttggaagaattggaagaaaactgggatgaagactcaagccccaagaaggcaaaaaggac 38402  T
Q  457 tatcagcactgagcctgtagtcatgcccagttttgaa 493  Q
    ||| |   |||||||| ||||||||||||||||||||    
T  38401 tataacttctgagcctatagtcatgcccagttttgaa 38365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 686 - 753
Target Start/End: Complemental strand, 38166 - 38099
Alignment:
Q  686 caagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||| |||  || | |||||||||| | |||| ||| |||||||    
T  38166 caagccttgaagaataagcaagcttcaggagccacatcatcagatccttttacaaatgctccagaagc 38099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 35; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 416 - 502
Target Start/End: Complemental strand, 21064 - 20978
Alignment:
Q  416 aactgggatgaggactcaagtcctaagaaaatgaagaagactatcagcactgagcctgtagtcatgcccagttttgaagcatctgag 502  Q
    ||||||||  ||||||||||||||||||||   || | ||||| ||   |||||||||||||||||||||| |||||||| ||||||    
T  21064 aactgggacaaggactcaagtcctaagaaagcaaaaatgactaccactgctgagcctgtagtcatgcccagctttgaagcttctgag 20978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 51385 - 51454
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    |||||||||||||||||||||||||||||| |||  |  ||||||| ||| || |||||||| |||||||    
T  51385 cacaagccttgaagaataagcaagcttcaggagccacttcttcagaacctgcttcaaaagctccagaagc 51454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2119 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold2119
Description:

Target: scaffold2119; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 684 - 753
Target Start/End: Original strand, 109 - 178
Alignment:
Q  684 cacaagccttgaagaataagcaagcttcagaagcatcagcttcagatccttctgcaaaagcttcagaagc 753  Q
    ||||||||||||| |||||||||||||||| |||  |  ||||||| ||| || |||||||| |||||||    
T  109 cacaagccttgaaaaataagcaagcttcaggagccacttcttcagaacctgcttcaaaagctccagaagc 178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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