View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5738_low_1 (Length: 894)

Name: NF5738_low_1
Description: NF5738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5738_low_1
NF5738_low_1
[»] chr7 (8 HSPs)
chr7 (107-368)||(27323870-27324131)
chr7 (412-718)||(27324176-27324476)
chr7 (738-877)||(9942839-9942978)
chr7 (738-877)||(1031948-1032087)
chr7 (766-876)||(40871552-40871662)
chr7 (738-877)||(17194129-17194267)
chr7 (777-877)||(40858267-40858367)
chr7 (744-807)||(15669415-15669478)
[»] chr4 (17 HSPs)
chr4 (111-368)||(28358670-28358926)
chr4 (412-718)||(28358971-28359271)
chr4 (738-877)||(36651978-36652117)
chr4 (738-877)||(42718294-42718433)
chr4 (738-877)||(43499021-43499160)
chr4 (738-877)||(7743296-7743435)
chr4 (738-874)||(39059961-39060097)
chr4 (738-877)||(9896743-9896882)
chr4 (738-876)||(37870896-37871034)
chr4 (244-359)||(43457119-43457231)
chr4 (114-188)||(43456980-43457054)
chr4 (797-874)||(23106861-23106938)
chr4 (777-877)||(40850567-40850667)
chr4 (789-877)||(47590702-47590790)
chr4 (777-877)||(56024798-56024898)
chr4 (738-801)||(23108098-23108161)
chr4 (778-877)||(48640488-48640587)
[»] chr6 (8 HSPs)
chr6 (412-718)||(3500408-3500710)
chr6 (222-368)||(3500219-3500364)
chr6 (107-220)||(3500079-3500192)
chr6 (742-877)||(24393632-24393767)
chr6 (738-876)||(12912498-12912636)
chr6 (742-877)||(18972857-18972993)
chr6 (789-877)||(6029095-6029183)
chr6 (147-185)||(29951303-29951341)
[»] chr8 (8 HSPs)
chr8 (738-877)||(8444497-8444636)
chr8 (739-877)||(24503779-24503917)
chr8 (745-877)||(45540046-45540178)
chr8 (738-876)||(13090025-13090163)
chr8 (738-876)||(4034539-4034677)
chr8 (777-877)||(9932343-9932443)
chr8 (789-877)||(25582828-25582916)
chr8 (777-877)||(13781090-13781190)
[»] chr5 (4 HSPs)
chr5 (738-877)||(19021114-19021253)
chr5 (738-877)||(22639283-22639422)
chr5 (764-877)||(26369182-26369295)
chr5 (759-876)||(22580642-22580759)
[»] chr2 (7 HSPs)
chr2 (738-877)||(6764144-6764283)
chr2 (739-877)||(12410512-12410650)
chr2 (738-877)||(37647689-37647828)
chr2 (741-877)||(12422574-12422710)
chr2 (738-868)||(27271372-27271502)
chr2 (738-876)||(11031502-11031640)
chr2 (780-877)||(2380868-2380965)
[»] scaffold0300 (1 HSPs)
scaffold0300 (738-877)||(9301-9440)
[»] chr1 (14 HSPs)
chr1 (738-877)||(4532324-4532463)
chr1 (738-877)||(33936151-33936290)
chr1 (744-877)||(31911795-31911928)
chr1 (107-207)||(33013417-33013517)
chr1 (738-876)||(19228137-19228274)
chr1 (738-876)||(34549075-34549213)
chr1 (222-286)||(33013314-33013378)
chr1 (777-877)||(20505398-20505498)
chr1 (789-877)||(26676664-26676752)
chr1 (777-877)||(33676743-33676843)
chr1 (764-877)||(27007634-27007747)
chr1 (799-877)||(28756725-28756803)
chr1 (777-877)||(46731822-46731922)
chr1 (839-877)||(51534715-51534753)
[»] chr3 (3 HSPs)
chr3 (15-104)||(48393606-48393695)
chr3 (777-877)||(10436678-10436778)
chr3 (777-877)||(20406132-20406232)
[»] scaffold0074 (1 HSPs)
scaffold0074 (742-877)||(23515-23651)
[»] scaffold0041 (1 HSPs)
scaffold0041 (766-876)||(94620-94730)


Alignment Details
Target: chr7 (Bit Score: 230; Significance: 1e-126; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 107 - 368
Target Start/End: Original strand, 27323870 - 27324131
Alignment:
Q  107 taacaccccataatgatctagttgcaccccaaaatggccaaaatacccttattataaaattaaattttcaaaatcaaacccttgccctcataaacccttt 206  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  27323870 taacaccccataatgatctagttgcaccctaaaatggcgaaaatacccatattataaaattaaattttcaaaatcaaacccttgccctcgtaaacccttt 27323969  T
Q  207 tcacgttttcttccggcttttatttctgaagaacaagaacttattataatgctttcaatgaatcaattgtagcacaaattttagttttcaaactaaagat 306  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||    
T  27323970 tcacgttttcttcctgcttttatttctgaagaacaagaacttattataacgctttcaatgaatcaattgtagcacaaattctagttttcaaacttaagat 27324069  T
Q  307 tgttttttcttgatttaatggatttgggtgcaattctagcttttcaattgttcggacataag 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27324070 tgttttttcttgatttaatggatttgggtgcaattctagcttttcaattgttcggacataag 27324131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 412 - 718
Target Start/End: Original strand, 27324176 - 27324476
Alignment:
Q  412 gggaatagtgcttttcaattgcaaataactaagagatatttaattagacgaagcatttgctttggtgcttgatttgatcgattttaaagtacaacaaaat 511  Q
    |||||||||| |||||||||||||||||    |||| |||||||||||||||||||  ||||||||||||| |||||| |||||||||| | ||||||||    
T  27324176 gggaatagtgtttttcaattgcaaataa----gagagatttaattagacgaagcat--gctttggtgcttgctttgattgattttaaagaaaaacaaaat 27324269  T
Q  512 caacaatgggaaaaataaataagaaaaacttatatgctttggtgtttgcatttgaga-ggtttcacattgatagttcccaattgcatcgtccatggtggt 610  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||    
T  27324270 caacaatggaaaaaataaataagaaaaacttatatgctttggtgtttgcatttgagagggtttcacactgatagttcccaattgcatcctccatgatggt 27324369  T
Q  611 tcatattggttggttggtggaaatcatcatccatggttgtgtgaagatggtgtagatgcagacagcaaaggaattatgtatcaggtggattttgaggttt 710  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||||| || ||||||||| ||||||||||||||||||||||||     
T  27324370 tcatatt-gttggttggtggaaatcatcatccatgggtgtgtgaagacagtgtagatgcaggcaacaaaggaatcatgtatcaggtggattttgaggttg 27324468  T
Q  711 ttgtttta 718  Q
    ||||||||    
T  27324469 ttgtttta 27324476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 9942978 - 9942839
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  9942978 cctttagcggcttctctgacagcaaacactcaactcttaatcttatttgactatcttgtgtgtgggtgatctggcttgaaagaaatgcttgcatatttca 9942879  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  9942878 ccaaaaagaagcttcttttaatcaattgttagataaagtt 9942839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 1031948 - 1032087
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||  |||||||| || ||||| ||||||||    
T  1031948 cctttagcggcttctctaacaacaaacgctcaactctgaatcttatttggctatattgtgtgtgggtgatctagcttgaaaggaacgctcgaatatttca 1032047  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||| ||||||||||||    
T  1032048 ccaaaaagaagcttcttttaatcaattattagataaagtt 1032087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 766 - 876
Target Start/End: Complemental strand, 40871662 - 40871552
Alignment:
Q  766 ctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattg 865  Q
    |||| ||||||| |||||||||||||| | |||||||||||| || |||||||| |||| ||| || |||||| ||||||||| ||||||||||||||||    
T  40871662 ctcagctcttaaccttatttggctatcatttgtgtgggtgatttggcttgaaaggaatgatcggatctttcaccaaaaagaagcttcttttaatcaattg 40871563  T
Q  866 ttagataaagt 876  Q
     ||||||||||    
T  40871562 ctagataaagt 40871552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 17194267 - 17194129
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||| ||||||||||| | || || ||||||||| ||||||||| ||||||||||||| ||||| || |||||||| ||||||   || ||| |    
T  17194267 cctttagcggtttttctaacagtagacacttaactcttaaccttatttggttatcttgtgtgtgagtgatttgacttgaaaggaatgcttaaatcttt-a 17194169  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | || || ||| |||||||||||||||| |||||||||||    
T  17194168 ccaataaaaagcttcttttaatcaattgctagataaagtt 17194129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 777 - 877
Target Start/End: Complemental strand, 40858367 - 40858267
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||  ||||||||  | |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  40858367 atcttatatggttatcttgtgtgtgggtgatttggcttgaaatgaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagt 40858268  T
Q  877 t 877  Q
    |    
T  40858267 t 40858267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 744 - 807
Target Start/End: Original strand, 15669415 - 15669478
Alignment:
Q  744 gcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgat 807  Q
    |||| ||||| || ||||| ||||||||| ||||||| || ||||| |||||||||||||||||    
T  15669415 gcgggttttccaaaagcaaccgctcaacttttaatctcatatggctttcttgtgtgtgggtgat 15669478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 210; Significance: 1e-114; HSPs: 17)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 111 - 368
Target Start/End: Original strand, 28358670 - 28358926
Alignment:
Q  111 accccataatgatctagttgcaccccaaaatggccaaaatacccttattataaaattaaattttcaaaatcaaacccttgccctcataaacccttttcac 210  Q
    |||||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||||||||||||||||||| || ||||| ||||||||||||||    
T  28358670 accccataatgatctagttgcatcctaaaatggcgaaaatacccatattataaaattaaattttcaaaatcaaacc-ttaccctcgtaaacccttttcac 28358768  T
Q  211 gttttcttccggcttttatttctgaagaacaagaacttattataatgctttcaatgaatcaattgtagcacaaattttagttttcaaactaaagattgtt 310  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  28358769 gttttcttcctgcttttatttctgaagaacaagaacttattataacgctttcaatgaatcaattgtagcacaaattctagttttcaaacttaagattgtt 28358868  T
Q  311 ttttcttgatttaatggatttgggtgcaattctagcttttcaattgttcggacataag 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28358869 ttttcttgatttaatggatttgggtgcaattctagcttttcaattgttcggacataag 28358926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 412 - 718
Target Start/End: Original strand, 28358971 - 28359271
Alignment:
Q  412 gggaatagtgcttttcaattgcaaataactaagagatatttaattagacgaagcatttgctttggtgcttgatttgatcgattttaaagtacaacaaaat 511  Q
    |||||||||| |||||||||||||||||    |||| |||||||||||||||||||  ||||||||||||| |||||| |||||||||| | ||||||||    
T  28358971 gggaatagtgtttttcaattgcaaataa----gagagatttaattagacgaagcat--gctttggtgcttgctttgattgattttaaagaaaaacaaaat 28359064  T
Q  512 caacaatgggaaaaataaataagaaaaacttatatgctttggtgtttgcatttgaga-ggtttcacattgatagttcccaattgcatcgtccatggtggt 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||||| ||||    
T  28359065 caacaatgggaaaaataaataagaaaaacttatatgctttggtgtttgcatttgagagggtttcacactgatagttcccaattgcatcctccatgatggt 28359164  T
Q  611 tcatattggttggttggtggaaatcatcatccatggttgtgtgaagatggtgtagatgcagacagcaaaggaattatgtatcaggtggattttgaggttt 710  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||   ||||||||||| || ||||||||| ||||||||||||||||||||||||     
T  28359165 tcatatt-gttggttggtggaaatcatcatccatgggtgtgtgaagacaatgtagatgcaggcaacaaaggaatcatgtatcaggtggattttgaggttg 28359263  T
Q  711 ttgtttta 718  Q
    ||||||||    
T  28359264 ttgtttta 28359271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 36652117 - 36651978
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  36652117 cctttagcggcttctctaacagcaaacactcaactcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaagaaatgctcgcatatttca 36652018  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  36652017 ccaaaaagaagcttcttttaatcaattgttagataaagtt 36651978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 42718294 - 42718433
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42718294 cctttagcggcttttctaacaacaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaagaaatgctcgcatatttca 42718393  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| || |||||||||||||||||||||||||    
T  42718394 ccaaaaagaagcttattttaatcaattgttagataaagtt 42718433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 43499021 - 43499160
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  43499021 cctttagcggcttctctaatagcaaacgctcaacacttaatcttatttggctatcttgtgtgtgggtgatctggcgtgaaagaaatgctcgcatatttca 43499120  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  43499121 ccaaaaagaagcttcttttaatcaattgttagataaagtt 43499160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 7743296 - 7743435
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||    
T  7743296 cctttaacggcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgcgtgtgggtgatctggcttgaaagaaatgctcgcatattcca 7743395  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||| ||||||||    
T  7743396 ccaaaaagaagcttcttttaatcaattgttaaataaagtt 7743435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 738 - 874
Target Start/End: Complemental strand, 39060097 - 39059961
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||| ||||| ||    
T  39060097 cctttagcggcttttctaacagcaaacgctcagctcttaatcttatttgactatcttgtgtgtgggtgatctgacttgaaaggaatgctcgaatattcca 39059998  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaa 874  Q
    | ||||||||| |||||||||||||||||||||||||    
T  39059997 ccaaaaagaagcttcttttaatcaattgttagataaa 39059961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 9896882 - 9896743
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||| ||||| |||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||    
T  9896882 cctttagtggcttctctaacggcaaacgctaatctcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaaggaatgctcgaatattcca 9896783  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| || |||||||||||||||||||||||||    
T  9896782 ccaaaaagaagcttattttaatcaattgttagataaagtt 9896743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 738 - 876
Target Start/End: Complemental strand, 37871034 - 37870896
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| ||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||| ||||| || |||||||| |||| ||| || |||||    
T  37871034 cctttatcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgagtgatttggcttgaaaggaatgatcggatctttca 37870935  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  37870934 ccaaaaagaagcttcttttaatcaattgctagataaagt 37870896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 244 - 359
Target Start/End: Original strand, 43457119 - 43457231
Alignment:
Q  244 aacttattataatgctttcaatgaatcaattgtagcacaaattttagttttcaaactaaagattgttttttcttgatttaatggatttgggtgcaattct 343  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||  ||||  |||    |||||| || ||||||||||||||| |||||||||    
T  43457119 aacttattataatgctttcaatgaatcaattgtagcacaaattctagtttgtaaacacaag---tttttttatttatttaatggatttggttgcaattct 43457215  T
Q  344 agcttttcaattgttc 359  Q
    ||||||||||||||||    
T  43457216 agcttttcaattgttc 43457231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 114 - 188
Target Start/End: Original strand, 43456980 - 43457054
Alignment:
Q  114 ccataatgatctagttgcaccccaaaatggccaaaatacccttattataaaattaaattttcaaaatcaaaccct 188  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  43456980 ccataatgatctagttacaccctaaaatggccaaaataccattattgtaaaattaaattttcaaaatcaaaccct 43457054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 797 - 874
Target Start/End: Complemental strand, 23106938 - 23106861
Alignment:
Q  797 gtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaa 874  Q
    ||||||||||| || |||||||| |||||||| || |||||| ||||||||| |||||||||||||||| ||||||||    
T  23106938 gtgtgggtgatttggcttgaaaggaatgctcggatctttcaccaaaaagaagcttcttttaatcaattgctagataaa 23106861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 877
Target Start/End: Original strand, 40850567 - 40850667
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||  |||||||| || |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  40850567 atcttatatggttatcttgtgtgtgggtgatttggcttgaaatgaatgctcggatttttcaccaaacagaagcttcgattaatcaattgctagataaagt 40850666  T
Q  877 t 877  Q
    |    
T  40850667 t 40850667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 789 - 877
Target Start/End: Complemental strand, 47590790 - 47590702
Alignment:
Q  789 tatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| |||||||||  ||||||||||| |||||||||||    
T  47590790 tatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagtttcgattaatcaattgctagataaagtt 47590702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 777 - 877
Target Start/End: Original strand, 56024798 - 56024898
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| |||||||||||||| |||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  56024798 atcttatatggttatcttgtgtgtggttgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagt 56024897  T
Q  877 t 877  Q
    |    
T  56024898 t 56024898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 738 - 801
Target Start/End: Complemental strand, 23108161 - 23108098
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtg 801  Q
    |||||||||| ||||| |||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  23108161 cctttagcggtttttcaaacagcaaacactcagctcttaaccttatttggctatcatgtgtgtg 23108098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 778 - 877
Target Start/End: Original strand, 48640488 - 48640587
Alignment:
Q  778 tcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    |||||| ||| ||||||||||||||||||| || |||||||  ||||||||  | |||||| ||| ||||| |||  |||||||| || |||||||||||    
T  48640488 tcttatatggttatcttgtgtgtgggtgatttggcttgaaatgaatgctcgggtttttcaccaaacagaagcttcgattaatcaactgctagataaagtt 48640587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 169; Significance: 4e-90; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 169; E-Value: 4e-90
Query Start/End: Original strand, 412 - 718
Target Start/End: Original strand, 3500408 - 3500710
Alignment:
Q  412 gggaatagtgcttttcaattgcaaataactaagagatatttaattagacgaagcatttgctttggtgcttgatttgatcgattttaaagtacaacaaaat 511  Q
    |||||||||| |||||||||||||||||    |||| ||||||||||||||||||| |  ||||||||||| |||||| |||||||||| | ||||||||    
T  3500408 gggaatagtgtttttcaattgcaaataa----gagagatttaattagacgaagcatgt--tttggtgcttgctttgattgattttaaagaaaaacaaaat 3500501  T
Q  512 caacaatgggaaaaataaataagaaaaacttatatgctttggtgtttgcatttgaga-ggtttcacattgatagttcccaattgcatcgtccatggtggt 610  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||| |||||| | ||    
T  3500502 caacaatgg-aaaaataaataagaaaaacttatatgctttggtgtttgcatttgagaaggtttcacactgatagttcgcaattgcatcctccatgatagt 3500600  T
Q  611 tcatattggttggttggtggaaatcatcatccatggttgtgtgaagatggtgtagatgcagacagcaaaggaattatgtatca---ggtggattttgagg 707  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||  |||||||||||| || |||| |||| ||||||||   ||||||||||||||    
T  3500601 tcatattg-ttggttggtggaaatcatcatccatggttgtgtgaagacagtgtagatgcaggcaacaaatgaatcatgtatcaggtggtggattttgagg 3500699  T
Q  708 tttttgtttta 718  Q
    || ||||||||    
T  3500700 ttgttgtttta 3500710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 222 - 368
Target Start/End: Original strand, 3500219 - 3500364
Alignment:
Q  222 gcttttatttctgaagaacaagaacttattataatgctttcaatgaatcaattgtagcacaaattttagttttcaaactaaagattgttttttcttgatt 321  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||| |||||| |||||||||||||    
T  3500219 gcttttatttctgaagaacatgaacttattataacgctttcaatgaatcaattgaagcataaattttagttttcaaacttaagatt-ttttttcttgatt 3500317  T
Q  322 taatggatttgggtgcaattctagcttttcaattgttcggacataag 368  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  3500318 taatggatttgggtgcaattctagcttttcaattgttcggacataag 3500364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 107 - 220
Target Start/End: Original strand, 3500079 - 3500192
Alignment:
Q  107 taacaccccataatgatctagttgcaccccaaaatggccaaaatacccttattataaaattaaattttcaaaatcaaacccttgccctcataaacccttt 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |||    
T  3500079 taacaccccataatgatctagttgcaccccaaaatggccaaaatacccttattgtaaaattaaatcttcaaaatcaaacccttgccctcgtaaacctttt 3500178  T
Q  207 tcacgttttcttcc 220  Q
    | ||||||||||||    
T  3500179 ttacgttttcttcc 3500192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 742 - 877
Target Start/End: Original strand, 24393632 - 24393767
Alignment:
Q  742 tagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaa 841  Q
    |||||| |||||||||| ||||| |||  ||||||||||||||||||||||||||||||||||||| || | |||||| |||||| | || |||||| ||    
T  24393632 tagcggtttttctaacaacaaacactccgctcttaatcttatttggctatcttgtgtgtgggtgatttggcatgaaaggaatgctggaatctttcaccaa 24393731  T
Q  842 aaagaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||| ||| |||||||||||||| |||||||||    
T  24393732 aaagaagcttcgtttaatcaattgtttgataaagtt 24393767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 738 - 876
Target Start/End: Complemental strand, 12912636 - 12912498
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| ||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||||||||| || |||||||| |||| | | || |||||    
T  12912636 cctttatcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgggtgatatggcttgaaaggaatgattggatctttca 12912537  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  12912536 ccaaaaagaagcttcttttaatcaattgctagataaagt 12912498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 742 - 877
Target Start/End: Complemental strand, 18972993 - 18972857
Alignment:
Q  742 tagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaa 841  Q
    |||||| |||||||||| ||||  |||  ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||  || |||||| ||    
T  18972993 tagcggtttttctaacaacaaaaactccgctcttaatcttatttggctatcttgtgtgtgggtgatttggcttgaaaggaatgctctaatctttcaccaa 18972894  T
Q  842 aaagaagtttcttttaatcaattg-ttagataaagtt 877  Q
    ||||||| ||| |||||||||||| || |||||||||    
T  18972893 aaagaagcttcgtttaatcaattgctttgataaagtt 18972857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 789 - 877
Target Start/End: Original strand, 6029095 - 6029183
Alignment:
Q  789 tatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    |||||||||| |||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| |||||||||||    
T  6029095 tatcttgtgtttgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagtt 6029183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 147 - 185
Target Start/End: Original strand, 29951303 - 29951341
Alignment:
Q  147 aaatacccttattataaaattaaattttcaaaatcaaac 185  Q
    |||||||| |||||||||||||||||| |||||||||||    
T  29951303 aaatacccctattataaaattaaatttacaaaatcaaac 29951341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 3e-63; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 8444636 - 8444497
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  8444636 cctttagcggcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaaggaatgctcgcatatttca 8444537  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  8444536 ccaaaaagaagcttcttttaatcaattgttagataaagtt 8444497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 739 - 877
Target Start/End: Original strand, 24503779 - 24503917
Alignment:
Q  739 ctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcac 838  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| |||| |||||||||||||    
T  24503779 ctttagctgcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatttgtcttgaaagtaatgttcgcatatttcac 24503878  T
Q  839 taaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
     ||||||||| ||||||||||||||||||||||||||||    
T  24503879 caaaaagaagcttcttttaatcaattgttagataaagtt 24503917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 745 - 877
Target Start/End: Original strand, 45540046 - 45540178
Alignment:
Q  745 cggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaa 844  Q
    |||||| ||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||  |||||||| |||||||| | ||||||| |||||    
T  45540046 cggcttctctaacaacaaactctcaactcttaatcttatttgtctatcttgtgtgtgggtgatctagcttgaaaggaatgctcgaacatttcaccaaaaa 45540145  T
Q  845 gaagtttcttttaatcaattgttagataaagtt 877  Q
    |||| ||||||||||||||||||||||||||||    
T  45540146 gaagcttcttttaatcaattgttagataaagtt 45540178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 738 - 876
Target Start/End: Complemental strand, 13090163 - 13090025
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| ||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||||||||| || |||||||| |||| ||| || |||||    
T  13090163 cctttatcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgggtgatttggcttgaaaggaatgatcggatctttca 13090064  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  13090063 ccaaaaagaagcttcttttaatcaattgctagataaagt 13090025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 738 - 876
Target Start/End: Complemental strand, 4034677 - 4034539
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| ||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||||||||| || |||||||| |||| ||  || |||||    
T  4034677 cctttatcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgggtgatttggcttgaaaggaatgatcagatctttca 4034578  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| | ||||||||    
T  4034577 ccaaaaagaagcttcttttaatcaattgctggataaagt 4034539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 877
Target Start/End: Complemental strand, 9932443 - 9932343
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  9932443 atcttatatggttatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagt 9932344  T
Q  877 t 877  Q
    |    
T  9932343 t 9932343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 789 - 877
Target Start/End: Complemental strand, 25582916 - 25582828
Alignment:
Q  789 tatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| |||||||||||    
T  25582916 tatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagtt 25582828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 777 - 877
Target Start/End: Complemental strand, 13781190 - 13781090
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| |||||||||||||| |||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||| | |||||||| |||||||    
T  13781190 atcttatatggttatcttgtgtgtggatgatttggcttgaaaggaatgctcgggtttttcaccaaatagaagcttcgattacttaattgttaaataaagt 13781091  T
Q  877 t 877  Q
    |    
T  13781090 t 13781090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 3e-63; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 19021114 - 19021253
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  19021114 cctttagcggcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaagaaatgctcgcatatttca 19021213  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  19021214 ccaaaaagaagcttcttttaatcaattgttagataaagtt 19021253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 22639283 - 22639422
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  22639283 cctttagcggcttctctaacagcaaacgctcttctcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaaggaatgctcgcatatttca 22639382  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  22639383 ccaaaaagaagcttcttttaatcaattgttagataaagtt 22639422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 764 - 877
Target Start/End: Complemental strand, 26369295 - 26369182
Alignment:
Q  764 cgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaat 863  Q
    ||||| ||| || ||||||| ||| ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  |||||||||    
T  26369295 cgctccacttttcatcttatatggttatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaat 26369196  T
Q  864 tgttagataaagtt 877  Q
    || |||||||||||    
T  26369195 tgctagataaagtt 26369182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 759 - 876
Target Start/End: Complemental strand, 22580759 - 22580642
Alignment:
Q  759 gcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaa 858  Q
    |||| ||||||||| |||||||||| ||||||||||||||| ||||||| || |||||||| |||| |||  | |||||  ||| | ||  ||| |||||    
T  22580759 gcaaccgctcaacttttaatcttatatggctatcttgtgtgcgggtgatttggcttgaaaggaatgttcgggtctttcaacaaatataaacttcgtttaa 22580660  T
Q  859 tcaattgttagataaagt 876  Q
    ||||||| ||||||||||    
T  22580659 tcaattgctagataaagt 22580642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 3e-63; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 6764144 - 6764283
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  6764144 cctttagcggcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaagaaatgctcgcatatttca 6764243  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  6764244 ccaaaaagaagcttcttttaatcaattgttagataaagtt 6764283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 739 - 877
Target Start/End: Original strand, 12410512 - 12410650
Alignment:
Q  739 ctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcac 838  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  12410512 ctttagcggcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatatggcttgaaagaaatgctcgcatatttcac 12410611  T
Q  839 taaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
     ||||||||| ||||||||||||||||||||||||||||    
T  12410612 caaaaagaagcttcttttaatcaattgttagataaagtt 12410650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 2e-58
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 37647689 - 37647828
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||    
T  37647689 cctttagcggcttctctaacagcaaacgctcaactcttaatcttatttggctatcctgtgtgtgggtgatctggcttgaaagaaatgctcgtatatttca 37647788  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| ||||||||||||||||||||||||||||    
T  37647789 ccaaaaagaagcttcttttaatcaattgttagataaagtt 37647828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 9e-57
Query Start/End: Original strand, 741 - 877
Target Start/End: Original strand, 12422574 - 12422710
Alignment:
Q  741 ttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcacta 840  Q
    ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |    
T  12422574 ttagcagcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatatggcttgaaagaaatgctcgcatatttcacca 12422673  T
Q  841 aaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    |||||||| ||||||||||||||||||||||||||||    
T  12422674 aaaagaagcttcttttaatcaattgttagataaagtt 12422710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 738 - 868
Target Start/End: Original strand, 27271372 - 27271502
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| || ||| ||||||||||||| ||||||||    
T  27271372 cctttagcggcttttctaacagcaaacgctcagctcttaatcttatttgcctaacttgtgtgtgggtgatttggcttaaaagaaatgctcgaatatttca 27271471  T
Q  838 ctaaaaagaagtttcttttaatcaattgtta 868  Q
    | ||||||||| |||||||||||||||||||    
T  27271472 ccaaaaagaagcttcttttaatcaattgtta 27271502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 738 - 876
Target Start/End: Original strand, 11031502 - 11031640
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||||||||| || |||||||| |||||||| || |||||    
T  11031502 cctttagcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgggtgatttgacttgaaaggaatgctcggatctttca 11031601  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  11031602 ccaaaaagaagcttcttttaatcaattgctagataaagt 11031640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 780 - 877
Target Start/End: Complemental strand, 2380965 - 2380868
Alignment:
Q  780 ttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    |||| ||| ||||||||||||||||||| || |||||||| |||||||  |  |||||| ||| ||||| |||  ||||||||||| |||||||||||    
T  2380965 ttatatggttatcttgtgtgtgggtgatttggcttgaaaggaatgctcagacttttcaccaaacagaagcttcaattaatcaattgctagataaagtt 2380868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 112; Significance: 4e-56; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 9301 - 9440
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  9301 cctttagcagcttctctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctggcttgaaaggaatgctcgcatatttca 9400  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||| || |||||||||||||||||||||||||    
T  9401 ccaaaaagaagcttattttaatcaattgttagataaagtt 9440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 9e-54; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 738 - 877
Target Start/End: Complemental strand, 4532463 - 4532324
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  4532463 cctttggcggcttctctaacagcaaacgctcaactcttaatcttatttgactatcttgtgtgtgggtgatctgacttgaaaggaatgctcgcatatttca 4532364  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | ||||||||  ||||||||||||||||||||||||||||    
T  4532363 ccaaaaagaaacttcttttaatcaattgttagataaagtt 4532324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 738 - 877
Target Start/End: Original strand, 33936151 - 33936290
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||| |||||||||||||||| | |||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||| || |||||    
T  33936151 cctttagcggtttttctaacagcaaacacacaactcttaatcttatttagctatcttgtgtgtgggtgatttggcttgaaaggaatgctcggatctttca 33936250  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    | |||| |||| ||| |||||||||||| || ||||||||    
T  33936251 ccaaaatgaagattcgtttaatcaattgctaaataaagtt 33936290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 744 - 877
Target Start/End: Complemental strand, 31911928 - 31911795
Alignment:
Q  744 gcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaa 843  Q
    ||||||| ||||| ||||| |||||| || ||||||||||||||||||||||||| |||||||| || |||||||| |||||||  || |||||| ||||    
T  31911928 gcggcttctctaatagcaaccgctcagcttttaatcttatttggctatcttgtgtatgggtgatttgacttgaaaggaatgctcagatctttcaccaaaa 31911829  T
Q  844 agaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||||| |||||||||||| |||||||||||    
T  31911828 agaagtttcgtttaatcaattgctagataaagtt 31911795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 107 - 207
Target Start/End: Complemental strand, 33013517 - 33013417
Alignment:
Q  107 taacaccccataatgatctagttgcaccccaaaatggccaaaatacccttattataaaattaaattttcaaaatcaaacccttgccctcataaacccttt 206  Q
    ||||||||||||||||||||||| || |  |||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  33013517 taacaccccataatgatctagttacatcttaaaatggctaaaatacccttattgtgaaattaaattttcaaaatcaaacccttgccctcataaacccttt 33013418  T
Q  207 t 207  Q
    |    
T  33013417 t 33013417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 738 - 876
Target Start/End: Complemental strand, 19228274 - 19228137
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||||||| ||||| |||| ||||| |||| ||||||| || ||||||||||| |||||||||||||| || |||||||| |||||||| || |||||    
T  19228274 cctttagcggtttttcaaacaacaaacactcagctcttaacct-atttggctatcatgtgtgtgggtgatttggcttgaaaggaatgctcggatctttca 19228176  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  19228175 ccaaaaagaagcttcttttaatcaattgctagataaagt 19228137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 738 - 876
Target Start/End: Original strand, 34549075 - 34549213
Alignment:
Q  738 cctttagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttca 837  Q
    |||||| ||| ||||| |||| ||||| |||| ||||||| |||||||||||||| |||||||||||||| || |||||||| |||| | | || ||| |    
T  34549075 cctttatcggtttttcaaacaacaaacactcagctcttaaccttatttggctatcatgtgtgtgggtgatatggcttgaaaggaatgataggatctttaa 34549174  T
Q  838 ctaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    | ||||||||| |||||||||||||||| ||||||||||    
T  34549175 ccaaaaagaagcttcttttaatcaattgctagataaagt 34549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 222 - 286
Target Start/End: Complemental strand, 33013378 - 33013314
Alignment:
Q  222 gcttttatttctgaagaacaagaacttattataatgctttcaatgaatcaattgtagcacaaatt 286  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33013378 gcttttatttctcaagaacatgaacttattataatgctttcaatgaatcaattgtagcacaaatt 33013314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 877
Target Start/End: Original strand, 20505398 - 20505498
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  20505398 atcttatatggttatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagt 20505497  T
Q  877 t 877  Q
    |    
T  20505498 t 20505498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 789 - 877
Target Start/End: Original strand, 26676664 - 26676752
Alignment:
Q  789 tatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| |||||||||||    
T  26676664 tatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagtt 26676752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 777 - 877
Target Start/End: Complemental strand, 33676843 - 33676743
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||| ||||| || |||||||| |||||||   | |||||| ||| |||||||||  ||||||||||| ||||||||||    
T  33676843 atcttatatggttatcttgtgtgtgagtgatttggcttgaaaggaatgctcaggtttttcaccaaacagaagtttcgattaatcaattgctagataaagt 33676744  T
Q  877 t 877  Q
    |    
T  33676743 t 33676743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 764 - 877
Target Start/End: Complemental strand, 27007747 - 27007634
Alignment:
Q  764 cgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaat 863  Q
    |||||| || |||| ||||| || |||||||||||||||||||| || |||||||  |||| |||  | |||||| ||||||||  ||| ||||||||||    
T  27007747 cgctcagcttttaaacttatatgactatcttgtgtgtgggtgatttggcttgaaatgaatgttcgggtctttcaccaaaaagaatcttcgtttaatcaat 27007648  T
Q  864 tgttagataaagtt 877  Q
    || |||||| ||||    
T  27007647 tgctagatagagtt 27007634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 799 - 877
Target Start/End: Complemental strand, 28756803 - 28756725
Alignment:
Q  799 gtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    ||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  |||||||||||||||||||||||    
T  28756803 gtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgttagataaagtt 28756725  T

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Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 777 - 877
Target Start/End: Original strand, 46731822 - 46731922
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||| |||  |||  | |||||| ||| | ||| |||  ||||||||||| ||||||||||    
T  46731822 atcttatatggttatcttgtgtgtgggtgatttggcttgaaaggaataatcgggtttttcaccaaacaaaagcttcgattaatcaattgctagataaagt 46731921  T
Q  877 t 877  Q
    |    
T  46731922 t 46731922  T

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Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 839 - 877
Target Start/End: Complemental strand, 51534753 - 51534715
Alignment:
Q  839 taaaaagaagtttcttttaatcaattgttagataaagtt 877  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  51534753 taaaaagaaacttcttttaatcaattgttagataaagtt 51534715  T

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Target: chr3 (Bit Score: 86; Significance: 1e-40; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 15 - 104
Target Start/End: Original strand, 48393606 - 48393695
Alignment:
Q  15 tcaattttttgagttagaaagaaaattgcgagtgaaataaaataatcaatgcgcctgcgtgggtactatttaaatccacaaccttttaaa 104  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48393606 tcaattttttgagttagaaagaaaattgcgactgaaataaaataatcaatgcgcctgcgtgggtactatttaaatccacaaccttttaaa 48393695  T

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Target: chr3; HSP #2
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 877
Target Start/End: Complemental strand, 10436778 - 10436678
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||| ||||||||  | |||||| ||| ||||| |||  ||||||||||| ||||||||||    
T  10436778 atcttatatggttatcttgtgtgtgggtgatttggcttgaaaggaatgctcgggtttttcaccaaacagaagcttcgattaatcaattgctagataaagt 10436679  T
Q  877 t 877  Q
    |    
T  10436678 t 10436678  T

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Target: chr3; HSP #3
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 777 - 877
Target Start/End: Original strand, 20406132 - 20406232
Alignment:
Q  777 atcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattgttagataaagt 876  Q
    ||||||| ||| ||||||||||||||||||| || |||||||| |||||||| || |||||| ||| ||||| |||  |||| |||||| ||||||||||    
T  20406132 atcttatatggttatcttgtgtgtgggtgatttgacttgaaaggaatgctcggatttttcaccaaacagaagcttcgattaagcaattgctagataaagt 20406231  T
Q  877 t 877  Q
    |    
T  20406232 t 20406232  T

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Target: scaffold0074 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 742 - 877
Target Start/End: Original strand, 23515 - 23651
Alignment:
Q  742 tagcggcttttctaacagcaaacgctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaa 841  Q
    |||||| |||||||||| ||||  |||  ||||||||||||||||||||||||||||||||||||| || |||||||| |||||||  || |||||| ||    
T  23515 tagcggtttttctaacaacaaaaactccgctcttaatcttatttggctatcttgtgtgtgggtgatttggcttgaaaggaatgctcaaatctttcaccaa 23614  T
Q  842 aaagaagtttcttttaatcaattg-ttagataaagtt 877  Q
    ||||||| ||| |||||||||||| || |||||||||    
T  23615 aaagaagcttcgtttaatcaattgctttgataaagtt 23651  T

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Target: scaffold0041 (Bit Score: 59; Significance: 2e-24; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 766 - 876
Target Start/End: Original strand, 94620 - 94730
Alignment:
Q  766 ctcaactcttaatcttatttggctatcttgtgtgtgggtgatctgccttgaaagaaatgctcgcatatttcactaaaaagaagtttcttttaatcaattg 865  Q
    |||| ||||||| |||||||||||||| | |||||||||||| || |||||||| |||| ||| || |||||| ||||||||| ||||||||||||||||    
T  94620 ctcagctcttaaccttatttggctatcatttgtgtgggtgatttggcttgaaaggaatgatcggatctttcaccaaaaagaagcttcttttaatcaattg 94719  T
Q  866 ttagataaagt 876  Q
     ||||||||||    
T  94720 ctagataaagt 94730  T

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