View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5738_low_11 (Length: 345)
Name: NF5738_low_11
Description: NF5738
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5738_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 11 - 327
Target Start/End: Complemental strand, 46848488 - 46848172
Alignment:
| Q |
11 |
agaatatagcaataagggtgcatcnnnnnnntccaatgattcatggccaattataatcaagcttacaacggattgtatgtgttgggatagcctcaaaatc |
110 |
Q |
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| T |
46848488 |
agaatgtagcaataagggtgcatcaaaaaaatccaatgattcatggccaattataatcaagcttgcaacggattgtatgtgttgggatagcctcaaaatc |
46848389 |
T |
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| Q |
111 |
tcaccttctaaggattttgaagaatatgttcttgaatatatgaatgaaagtagtcgtaaagctttggaatcatggattccactgaacatattaatttatg |
210 |
Q |
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| T |
46848388 |
tcaccttctaaggattttgaagaatatgttcttgaatatatgaatgaaagtagtcgtaaagctttggaatcatggattccactgaacatattaatttatg |
46848289 |
T |
|
| Q |
211 |
atgttgatacttgtgaaacttatgattcaaatttgttcaaaaaagagtcattttggtttgatcctatgcctcttgtgggtgaaaagacaaaagttggtaa |
310 |
Q |
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| T |
46848288 |
atgttgatacttgtgaaacttatgattcaaatttgtccaaaaaagagtcattttggtttgatcctatgcctcttgtgggtgaaaagacaaaagttggtaa |
46848189 |
T |
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| Q |
311 |
acactctttttcttatt |
327 |
Q |
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||||||||||||||||| |
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| T |
46848188 |
acactctttttcttatt |
46848172 |
T |
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