View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5739-Insertion-1 (Length: 724)

Name: NF5739-Insertion-1
Description: NF5739
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5739-Insertion-1
NF5739-Insertion-1
[»] chr3 (82 HSPs)
chr3 (395-716)||(20498095-20498415)
chr3 (404-716)||(19253721-19254033)
chr3 (400-716)||(996086-996401)
chr3 (400-716)||(10139146-10139462)
chr3 (404-716)||(37820477-37820789)
chr3 (402-716)||(6589455-6589770)
chr3 (400-716)||(3206205-3206512)
chr3 (400-716)||(33807798-33808118)
chr3 (410-716)||(35337635-35337939)
chr3 (419-716)||(44762037-44762334)
chr3 (400-716)||(29448858-29449176)
chr3 (395-716)||(40246729-40247050)
chr3 (400-716)||(54625482-54625798)
chr3 (500-716)||(3999645-3999861)
chr3 (404-716)||(25418260-25418572)
chr3 (400-715)||(52114420-52114734)
chr3 (400-701)||(51699495-51699795)
chr3 (402-708)||(29029898-29030203)
chr3 (506-710)||(33996547-33996751)
chr3 (402-709)||(36674137-36674444)
chr3 (444-716)||(53929128-53929390)
chr3 (402-662)||(1440006-1440265)
chr3 (404-709)||(44906520-44906825)
chr3 (506-716)||(6035053-6035263)
chr3 (447-709)||(11431463-11431725)
chr3 (400-681)||(22057653-22057933)
chr3 (450-709)||(40897084-40897343)
chr3 (500-709)||(17946278-17946487)
chr3 (539-709)||(18749641-18749811)
chr3 (500-709)||(34484037-34484246)
chr3 (587-716)||(5825139-5825268)
chr3 (393-709)||(31646293-31646607)
chr3 (402-650)||(10660427-10660675)
chr3 (393-709)||(26107144-26107460)
chr3 (447-709)||(54628780-54629043)
chr3 (392-709)||(50903247-50903567)
chr3 (628-716)||(6131233-6131321)
chr3 (581-709)||(32580247-32580375)
chr3 (402-709)||(52617978-52618279)
chr3 (395-709)||(48379043-48379356)
chr3 (402-639)||(23753463-23753700)
chr3 (581-716)||(27899415-27899540)
chr3 (539-696)||(51737746-51737903)
chr3 (500-709)||(52810368-52810577)
chr3 (500-709)||(39038030-39038229)
chr3 (605-716)||(1439894-1440005)
chr3 (500-709)||(10728658-10728857)
chr3 (402-705)||(20832887-20833187)
chr3 (402-709)||(50762067-50762364)
chr3 (395-486)||(12734070-12734161)
chr3 (499-709)||(37454850-37455050)
chr3 (581-716)||(39842494-39842619)
chr3 (582-716)||(52079999-52080117)
chr3 (590-684)||(55235264-55235359)
chr3 (450-715)||(44276329-44276580)
chr3 (663-716)||(33807680-33807733)
chr3 (395-573)||(18749455-18749633)
chr3 (581-698)||(6975817-6975924)
chr3 (581-644)||(539476-539539)
chr3 (402-531)||(27240428-27240557)
chr3 (444-531)||(6131398-6131484)
chr3 (402-489)||(15493958-15494045)
chr3 (392-482)||(10728833-10728923)
chr3 (497-570)||(6131317-6131390)
chr3 (402-478)||(39842667-39842743)
chr3 (654-709)||(45862985-45863040)
chr3 (402-482)||(52810312-52810392)
chr3 (542-637)||(23535890-23535984)
chr3 (395-436)||(16010748-16010789)
chr3 (400-489)||(52079883-52079965)
chr3 (450-482)||(6975731-6975763)
chr3 (641-709)||(15492874-15492942)
chr3 (400-436)||(33996771-33996807)
chr3 (450-482)||(34484222-34484254)
chr3 (450-482)||(51737919-51737951)
chr3 (402-482)||(539615-539695)
chr3 (447-478)||(2024144-2024175)
chr3 (450-481)||(3999796-3999827)
chr3 (654-708)||(12103734-12103789)
chr3 (447-482)||(17946267-17946302)
chr3 (450-481)||(33996692-33996723)
chr3 (447-482)||(38772314-38772349)
[»] chr2 (40 HSPs)
chr2 (393-716)||(24776240-24776563)
chr2 (400-716)||(16269583-16269899)
chr2 (400-716)||(31170626-31170942)
chr2 (400-710)||(35316954-35317264)
chr2 (394-716)||(14198579-14198900)
chr2 (400-716)||(12407272-12407588)
chr2 (450-716)||(20605178-20605444)
chr2 (400-716)||(22551765-22552081)
chr2 (400-716)||(43847538-43847854)
chr2 (400-716)||(305467-305785)
chr2 (395-696)||(1789329-1789630)
chr2 (398-716)||(44765665-44765974)
chr2 (403-716)||(5093049-5093352)
chr2 (410-710)||(32125152-32125455)
chr2 (402-709)||(28844449-28844756)
chr2 (393-709)||(33135508-33135823)
chr2 (539-716)||(9120157-9120334)
chr2 (393-691)||(26788669-26788969)
chr2 (447-709)||(10657345-10657607)
chr2 (403-709)||(28740302-28740598)
chr2 (400-565)||(20605044-20605209)
chr2 (400-648)||(26601270-26601518)
chr2 (501-709)||(25288152-25288360)
chr2 (450-650)||(7026546-7026746)
chr2 (506-709)||(18177265-18177468)
chr2 (416-716)||(10125302-10125594)
chr2 (391-709)||(3463554-3463863)
chr2 (400-523)||(9120060-9120183)
chr2 (402-709)||(13833441-13833738)
chr2 (598-709)||(43078653-43078764)
chr2 (447-639)||(3574786-3574978)
chr2 (402-623)||(215320-215541)
chr2 (392-478)||(378863-378949)
chr2 (587-650)||(379016-379079)
chr2 (400-488)||(19144916-19145004)
chr2 (402-476)||(43078569-43078643)
chr2 (654-709)||(6224576-6224631)
chr2 (581-639)||(6224626-6224684)
chr2 (581-630)||(21370638-21370687)
chr2 (654-707)||(215249-215301)
[»] chr5 (33 HSPs)
chr5 (395-716)||(21146953-21147274)
chr5 (400-716)||(33656040-33656358)
chr5 (400-716)||(27458949-27459264)
chr5 (404-710)||(32157899-32158210)
chr5 (447-710)||(139211-139474)
chr5 (450-710)||(5272924-5273184)
chr5 (400-682)||(6460683-6460965)
chr5 (539-716)||(7016738-7016915)
chr5 (402-706)||(4550266-4550570)
chr5 (402-709)||(14000111-14000418)
chr5 (539-696)||(849177-849334)
chr5 (402-716)||(1152102-1152416)
chr5 (447-709)||(13925869-13926131)
chr5 (509-709)||(7947579-7947779)
chr5 (444-676)||(14465266-14465497)
chr5 (402-709)||(4240468-4240765)
chr5 (581-709)||(39852417-39852545)
chr5 (392-709)||(5948992-5949298)
chr5 (401-716)||(9689553-9689864)
chr5 (402-639)||(37013807-37014044)
chr5 (447-709)||(40013718-40013970)
chr5 (447-716)||(22746235-22746496)
chr5 (400-489)||(7016923-7017012)
chr5 (401-558)||(5273118-5273276)
chr5 (500-650)||(1461203-1461353)
chr5 (395-480)||(43319132-43319218)
chr5 (506-716)||(9220716-9220916)
chr5 (399-523)||(16894052-16894175)
chr5 (444-481)||(849166-849203)
chr5 (402-478)||(7948554-7948630)
chr5 (539-573)||(16894044-16894078)
chr5 (447-480)||(1511587-1511620)
chr5 (449-482)||(9220856-9220889)
[»] chr6 (21 HSPs)
chr6 (395-716)||(6197477-6197798)
chr6 (400-715)||(2300738-2301053)
chr6 (400-716)||(1391514-1391830)
chr6 (393-716)||(29076480-29076805)
chr6 (393-716)||(29111453-29111779)
chr6 (447-716)||(28002602-28002871)
chr6 (402-709)||(31895588-31895895)
chr6 (415-716)||(7051750-7052051)
chr6 (402-709)||(34773301-34773608)
chr6 (393-709)||(14262439-14262755)
chr6 (539-709)||(7497105-7497274)
chr6 (500-709)||(34759056-34759266)
chr6 (500-709)||(30385075-30385272)
chr6 (586-709)||(31067569-31067682)
chr6 (501-681)||(656957-657122)
chr6 (601-709)||(4200443-4200541)
chr6 (667-716)||(2238668-2238717)
chr6 (675-715)||(11113733-11113773)
chr6 (450-482)||(30385248-30385280)
chr6 (450-482)||(34759242-34759274)
chr6 (450-481)||(656989-657020)
[»] chr7 (72 HSPs)
chr7 (400-715)||(43581090-43581405)
chr7 (400-716)||(973075-973392)
chr7 (395-716)||(12893295-12893616)
chr7 (395-716)||(30440683-30441004)
chr7 (400-716)||(44343395-44343711)
chr7 (400-716)||(18914734-18915050)
chr7 (400-716)||(47879060-47879376)
chr7 (400-716)||(47914158-47914474)
chr7 (400-716)||(40996648-40996965)
chr7 (400-716)||(34008907-34009221)
chr7 (402-716)||(7719259-7719574)
chr7 (401-716)||(20275262-20275577)
chr7 (450-716)||(34695215-34695481)
chr7 (398-716)||(32142916-32143237)
chr7 (539-716)||(7718361-7718538)
chr7 (402-709)||(29614770-29615077)
chr7 (401-697)||(727405-727692)
chr7 (393-709)||(28342225-28342541)
chr7 (400-648)||(31638767-31639015)
chr7 (539-716)||(39219376-39219552)
chr7 (402-709)||(23101185-23101492)
chr7 (410-716)||(7113358-7113660)
chr7 (392-716)||(10068343-10068668)
chr7 (402-709)||(39783986-39784293)
chr7 (402-709)||(9882243-9882549)
chr7 (402-709)||(7993029-7993336)
chr7 (393-709)||(18838267-18838583)
chr7 (449-688)||(12963635-12963874)
chr7 (447-706)||(33382569-33382828)
chr7 (402-709)||(3022813-3023120)
chr7 (585-686)||(43679491-43679592)
chr7 (415-715)||(19251439-19251729)
chr7 (393-716)||(3797066-3797379)
chr7 (500-709)||(28034811-28035020)
chr7 (506-716)||(9179871-9180071)
chr7 (587-716)||(43187356-43187485)
chr7 (508-709)||(8675326-8675527)
chr7 (500-716)||(12740358-12740573)
chr7 (400-569)||(8078287-8078457)
chr7 (447-650)||(37327859-37328062)
chr7 (447-709)||(40460723-40460975)
chr7 (499-706)||(44121919-44122116)
chr7 (539-672)||(10676463-10676596)
chr7 (590-709)||(19810874-19810983)
chr7 (402-681)||(32883668-32883948)
chr7 (404-652)||(46405494-46405742)
chr7 (392-639)||(17001099-17001346)
chr7 (586-685)||(25805763-25805862)
chr7 (497-650)||(29585497-29585649)
chr7 (500-709)||(509641-509840)
chr7 (601-709)||(37972873-37972981)
chr7 (447-650)||(39028029-39028232)
chr7 (400-524)||(34695123-34695247)
chr7 (499-706)||(44623295-44623492)
chr7 (400-489)||(39219561-39219650)
chr7 (601-709)||(41827390-41827498)
chr7 (586-706)||(44256775-44256895)
chr7 (402-489)||(43679363-43679451)
chr7 (586-697)||(1470252-1470362)
chr7 (506-706)||(33892269-33892459)
chr7 (402-558)||(48117750-48117906)
chr7 (621-699)||(10617024-10617102)
chr7 (581-639)||(47066770-47066828)
chr7 (392-478)||(21067759-21067845)
chr7 (393-482)||(29893001-29893090)
chr7 (393-482)||(43187576-43187665)
chr7 (586-645)||(447854-447913)
chr7 (402-478)||(509585-509661)
chr7 (417-489)||(10676604-10676676)
chr7 (397-531)||(41827196-41827330)
chr7 (450-481)||(7718512-7718543)
chr7 (404-482)||(29585446-29585524)
[»] chr8 (48 HSPs)
chr8 (392-716)||(42735276-42735600)
chr8 (402-716)||(26374429-26374741)
chr8 (400-716)||(2704818-2705134)
chr8 (400-716)||(7506898-7507214)
chr8 (400-716)||(23115168-23115483)
chr8 (404-716)||(42938116-42938428)
chr8 (400-716)||(5576619-5576936)
chr8 (104-284)||(8756151-8756331)
chr8 (401-716)||(41478989-41479294)
chr8 (500-716)||(24501812-24502028)
chr8 (400-716)||(42937251-42937558)
chr8 (503-715)||(10392237-10392449)
chr8 (400-704)||(32711305-32711597)
chr8 (401-716)||(43959549-43959854)
chr8 (402-709)||(14782141-14782448)
chr8 (402-709)||(44725816-44726123)
chr8 (393-709)||(19717887-19718203)
chr8 (395-709)||(10295386-10295701)
chr8 (392-706)||(18958736-18959050)
chr8 (393-709)||(9288463-9288772)
chr8 (404-706)||(39467477-39467778)
chr8 (402-709)||(7466228-7466525)
chr8 (447-709)||(26856004-26856267)
chr8 (586-716)||(4403184-4403314)
chr8 (539-709)||(43166696-43166866)
chr8 (447-709)||(18305977-18306229)
chr8 (588-710)||(4950021-4950143)
chr8 (498-716)||(39189815-39190030)
chr8 (393-639)||(4031334-4031580)
chr8 (450-709)||(32497466-32497715)
chr8 (402-650)||(16362089-16362337)
chr8 (393-709)||(42305801-42306107)
chr8 (402-639)||(31623588-31623825)
chr8 (400-489)||(24214817-24214906)
chr8 (104-194)||(10506295-10506385)
chr8 (392-482)||(26373687-26373778)
chr8 (589-696)||(13478269-13478376)
chr8 (587-695)||(8410416-8410526)
chr8 (395-482)||(24502004-24502091)
chr8 (400-531)||(8543410-8543545)
chr8 (346-396)||(8756328-8756378)
chr8 (402-478)||(32497376-32497452)
chr8 (449-554)||(43166809-43166914)
chr8 (581-650)||(37857191-37857260)
chr8 (654-716)||(9770439-9770501)
chr8 (356-396)||(8750666-8750706)
chr8 (450-481)||(24501963-24501994)
chr8 (450-479)||(4403090-4403119)
[»] chr4 (77 HSPs)
chr4 (400-716)||(25331021-25331337)
chr4 (393-716)||(41881082-41881407)
chr4 (395-716)||(1044695-1045013)
chr4 (408-715)||(32950837-32951144)
chr4 (400-716)||(37046450-37046768)
chr4 (400-716)||(22201905-22202221)
chr4 (400-686)||(28541588-28541874)
chr4 (391-716)||(39479355-39479681)
chr4 (400-716)||(55302733-55303049)
chr4 (418-716)||(34228583-34228880)
chr4 (399-716)||(1112783-1113099)
chr4 (400-716)||(30009677-30009993)
chr4 (500-716)||(12112935-12113151)
chr4 (400-716)||(24130981-24131288)
chr4 (400-716)||(7007263-7007580)
chr4 (397-716)||(46635648-46635962)
chr4 (401-716)||(31314742-31315043)
chr4 (393-695)||(19740929-19741230)
chr4 (400-686)||(7249795-7250089)
chr4 (400-715)||(40537161-40537461)
chr4 (448-716)||(3436531-3436799)
chr4 (539-716)||(42786713-42786890)
chr4 (402-709)||(5441296-5441603)
chr4 (402-709)||(27767948-27768255)
chr4 (402-709)||(54341036-54341343)
chr4 (402-709)||(51320813-51321120)
chr4 (402-672)||(23464845-23465117)
chr4 (400-659)||(25504696-25504954)
chr4 (581-716)||(41320881-41321016)
chr4 (500-687)||(25446041-25446227)
chr4 (447-709)||(37828409-37828671)
chr4 (396-716)||(53275722-53276046)
chr4 (449-709)||(54853475-54853735)
chr4 (13-116)||(48952137-48952240)
chr4 (500-716)||(9163066-9163274)
chr4 (584-716)||(27454078-27454210)
chr4 (450-706)||(37915767-37916023)
chr4 (402-709)||(30967316-30967613)
chr4 (500-709)||(23987204-23987403)
chr4 (581-709)||(48261198-48261326)
chr4 (447-709)||(32322028-32322290)
chr4 (587-707)||(44770862-44770982)
chr4 (497-716)||(39307253-39307472)
chr4 (403-639)||(49834890-49835126)
chr4 (402-652)||(29649731-29649981)
chr4 (448-709)||(12913161-12913413)
chr4 (622-709)||(8711978-8712065)
chr4 (392-531)||(20021226-20021365)
chr4 (622-709)||(24736447-24736534)
chr4 (587-709)||(56445362-56445474)
chr4 (581-709)||(41725196-41725321)
chr4 (500-709)||(36479249-36479447)
chr4 (641-716)||(11090435-11090510)
chr4 (500-672)||(28370914-28371086)
chr4 (400-531)||(41320640-41320769)
chr4 (450-706)||(50018191-50018437)
chr4 (400-481)||(42786657-42786739)
chr4 (506-709)||(49501526-49501721)
chr4 (506-709)||(49507591-49507786)
chr4 (581-710)||(41581795-41581923)
chr4 (400-564)||(37915675-37915839)
chr4 (539-715)||(28483928-28484093)
chr4 (500-639)||(32684065-32684203)
chr4 (400-526)||(49469211-49469337)
chr4 (581-639)||(5800049-5800107)
chr4 (393-482)||(23987139-23987228)
chr4 (613-707)||(20021436-20021531)
chr4 (400-476)||(25445984-25446059)
chr4 (450-483)||(41320802-41320835)
chr4 (450-482)||(9163058-9163090)
chr4 (447-482)||(28370903-28370938)
chr4 (447-482)||(36479423-36479458)
chr4 (447-482)||(44771046-44771081)
chr4 (660-706)||(32684018-32684064)
chr4 (404-531)||(29855576-29855702)
chr4 (403-436)||(44775953-44775986)
chr4 (675-708)||(55047641-55047674)
[»] chr1 (57 HSPs)
chr1 (400-716)||(21222032-21222347)
chr1 (393-716)||(45760009-45760333)
chr1 (401-716)||(47654351-47654669)
chr1 (400-716)||(35279556-35279872)
chr1 (400-716)||(49198269-49198583)
chr1 (400-716)||(28824373-28824688)
chr1 (400-716)||(6304252-6304570)
chr1 (395-716)||(50192550-50192872)
chr1 (450-716)||(19451808-19452074)
chr1 (400-716)||(35679128-35679444)
chr1 (400-681)||(730033-730314)
chr1 (404-711)||(49417972-49418279)
chr1 (458-716)||(45535886-45536150)
chr1 (450-716)||(47780644-47780911)
chr1 (450-716)||(29556038-29556305)
chr1 (402-709)||(6312460-6312767)
chr1 (404-687)||(48524208-48524490)
chr1 (402-709)||(29396395-29396702)
chr1 (402-716)||(9577432-9577746)
chr1 (400-716)||(33025396-33025703)
chr1 (402-706)||(32588963-32589268)
chr1 (402-709)||(25612043-25612350)
chr1 (450-706)||(51701514-51701770)
chr1 (402-709)||(15835060-15835367)
chr1 (447-709)||(48177469-48177731)
chr1 (393-603)||(22183247-22183457)
chr1 (402-709)||(9322507-9322814)
chr1 (405-708)||(46327931-46328234)
chr1 (586-716)||(31572197-31572327)
chr1 (404-709)||(28387400-28387705)
chr1 (400-573)||(953703-953876)
chr1 (500-716)||(37014640-37014856)
chr1 (402-630)||(49230772-49231000)
chr1 (393-531)||(14494089-14494224)
chr1 (405-639)||(18798380-18798614)
chr1 (447-709)||(29219219-29219469)
chr1 (400-524)||(19452042-19452166)
chr1 (447-705)||(5495117-5495365)
chr1 (500-709)||(38536106-38536305)
chr1 (500-709)||(38558324-38558523)
chr1 (400-489)||(47780503-47780592)
chr1 (402-573)||(8141271-8141442)
chr1 (589-648)||(955823-955882)
chr1 (581-672)||(51085860-51085951)
chr1 (586-716)||(48668785-48668905)
chr1 (409-474)||(31572405-31572470)
chr1 (589-639)||(31622536-31622586)
chr1 (404-474)||(42290732-42290802)
chr1 (679-716)||(48524805-48524842)
chr1 (660-708)||(18798615-18798663)
chr1 (400-436)||(28541388-28541424)
chr1 (617-708)||(38320007-38320098)
chr1 (450-482)||(38536281-38536313)
chr1 (450-482)||(38558499-38558531)
chr1 (450-482)||(47784405-47784437)
chr1 (450-489)||(47780598-47780637)
chr1 (539-682)||(47784410-47784542)
[»] scaffold0400 (1 HSPs)
scaffold0400 (393-716)||(15033-15353)
[»] scaffold0365 (1 HSPs)
scaffold0365 (393-716)||(15676-15996)
[»] scaffold0037 (1 HSPs)
scaffold0037 (400-713)||(100102-100415)
[»] scaffold0276 (1 HSPs)
scaffold0276 (449-715)||(540-806)
[»] scaffold0004 (2 HSPs)
scaffold0004 (497-716)||(102081-102302)
scaffold0004 (400-436)||(102027-102063)
[»] scaffold0151 (2 HSPs)
scaffold0151 (539-716)||(38605-38781)
scaffold0151 (400-481)||(38755-38836)
[»] scaffold0113 (2 HSPs)
scaffold0113 (500-716)||(38895-39111)
scaffold0113 (400-482)||(39087-39169)
[»] scaffold0543 (1 HSPs)
scaffold0543 (402-709)||(10453-10760)
[»] scaffold1504 (1 HSPs)
scaffold1504 (402-709)||(756-1063)
[»] scaffold0110 (1 HSPs)
scaffold0110 (447-709)||(39624-39886)
[»] scaffold0054 (2 HSPs)
scaffold0054 (588-709)||(36914-37035)
scaffold0054 (447-482)||(37057-37092)
[»] scaffold0651 (1 HSPs)
scaffold0651 (401-531)||(8654-8784)
[»] scaffold0042 (2 HSPs)
scaffold0042 (586-709)||(58083-58206)
scaffold0042 (402-478)||(58272-58348)
[»] scaffold0922 (1 HSPs)
scaffold0922 (402-646)||(4093-4337)
[»] scaffold0536 (2 HSPs)
scaffold0536 (10-116)||(638-741)
scaffold0536 (12-73)||(5730-5791)
[»] scaffold0306 (2 HSPs)
scaffold0306 (500-650)||(13873-14023)
scaffold0306 (391-482)||(13806-13897)
[»] scaffold0152 (2 HSPs)
scaffold0152 (500-650)||(21304-21454)
scaffold0152 (391-482)||(21430-21521)
[»] scaffold0347 (2 HSPs)
scaffold0347 (641-716)||(14892-14967)
scaffold0347 (447-478)||(14833-14864)
[»] scaffold0839 (1 HSPs)
scaffold0839 (617-696)||(3712-3791)
[»] scaffold0010 (3 HSPs)
scaffold0010 (449-482)||(233719-233752)
scaffold0010 (449-482)||(234567-234600)
scaffold0010 (449-482)||(222551-222584)
[»] scaffold0007 (1 HSPs)
scaffold0007 (589-682)||(199905-199998)


Alignment Details
Target: chr3 (Bit Score: 213; Significance: 1e-116; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 20498095 - 20498415
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||         
T  20498095 aggggggtgtattggatcatgattctaagggattttaaaagacttttt-atcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 20498193  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      |||||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  20498194 aagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 20498293  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20498294 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 20498393  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||    
T  20498394 aacatgagatttcttaggattg 20498415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 404 - 716
Target Start/End: Original strand, 19253721 - 19254033
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       || ||||    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 19253820  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||    
T  19253821 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 19253920  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T
Q  704 tttcttaggattg 716  Q
    |||||||||||||    
T  19254021 tttcttaggattg 19254033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 996401 - 996086
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| |||||        ||     
T  996401 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatt-aaaaaaagtc 996303  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||| ||||||       |||||||||||||||||||| | ||||||||||||       |||||||||||||||||||    
T  996302 ttgtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaat 996203  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  996202 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 996103  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  996102 gagatttcttaggattg 996086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 10139462 - 10139146
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| ||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  10139462 ggtgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 10139363  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||||||||||||||| || ||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  10139362 ttgtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 10139263  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  10139262 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 10139163  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  10139162 gagatttcttaggattg 10139146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 404 - 716
Target Start/End: Complemental strand, 37820789 - 37820477
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| ||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       || ||||    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 37820690  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    ||||||||||||||||||||||||||||        ||||||||||||||||||| | ||||||||||||       |||||||||||||||||||||||    
T  37820689 gttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 37820590  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |||||||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 37820490  T
Q  704 tttcttaggattg 716  Q
    ||||||| |||||    
T  37820489 tttcttaagattg 37820477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 402 - 716
Target Start/End: Original strand, 6589455 - 6589770
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||||||||||| |||||||||        |||||||||||||||||||||||||||| ||||||||||  |||||       || |    
T  6589455 tgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtct 6589554  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    |||||||||||||||| |||| |||||||||       |||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||    
T  6589555 tgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatc 6589654  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6589655 attcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 6589754  T
Q  701 agatttcttaggattg 716  Q
    ||||||||||||||||    
T  6589755 agatttcttaggattg 6589770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 3206512 - 3206205
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||       ||     
T  3206512 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 3206413  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| |||||||||||||||||||   |          |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  3206412 ttgtggtattcaatcaagattctttaaaa---------agtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 3206322  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  3206321 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacat 3206222  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  3206221 gagatttcttatgattg 3206205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 33808118 - 33807798
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggt---attcaatcaagactcttttcaatttnnnnnnn 496  Q
    ||||||||| |||||||||||||||||||||||||||       ||||| |||||||||||||||   |||||||||| | ||||||||||||           
T  33808118 ggtgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaaaaa 33808019  T
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattca 595  Q
    || |||||||||||||| |||||||||||||||||       |||||||||||||||||||| ||||||||||||||        |||||||||||||||    
T  33808018 gtcttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattca 33807919  T
Q  596 aaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaa 695  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33807918 aaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaa 33807819  T
Q  696 acatgagatttcttaggattg 716  Q
    |||||||||||||||||||||    
T  33807818 acatgagatttcttaggattg 33807798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 410 - 716
Target Start/End: Original strand, 35337635 - 35337939
Alignment:
Q  410 atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttatt 509  Q
    |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||| ||||||       || ||||||||||    
T  35337635 atcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttatt 35337734  T
Q  510 caatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatt 609  Q
    |||||||||||| |||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||  |||||||||    
T  35337735 caatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatt 35337834  T
Q  610 tcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||    
T  35337835 tcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt-tt 35337932  T
Q  710 aggattg 716  Q
    |||||||    
T  35337933 aggattg 35337939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 419 - 716
Target Start/End: Complemental strand, 44762334 - 44762037
Alignment:
Q  419 ctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaaga 518  Q
    ||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||    
T  44762334 ctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaga 44762235  T
Q  519 ttctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaat 618  Q
    |||||||||||||       ||| ||| |||||||||||| ||||||||||||||       ||||||||||||| ||||| |||||| |||||||| ||    
T  44762234 ttctttgtcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggat 44762135  T
Q  619 tgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  44762134 tgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattg 44762037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 29449176 - 29448858
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn--g 497  Q
    |||||||| |||||||||| |||||||||||||||||       || |||||||| ||||||||||||||||||| ||||||| ||| ||         |    
T  29449176 ggtgtattagatcatgattataagggattttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaaaag 29449077  T
Q  498 ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    | |||||||||||||||||||||| |||||||||       |||||||| ||||||||||| ||||| ||||||||       |||||||||||||||||    
T  29449076 tcttgtgttattcaatcaagattccttgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaa 29448977  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||    
T  29448976 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaac 29448877  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  29448876 atgagatttcttaggattg 29448858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 40246729 - 40247050
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||| |||||||||| |       ||| |||||||||||||||||||||||||||||||||||    |||         
T  40246729 aggggggtgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaa 40246828  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
       | ||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||| ||||||| ||       ||||||||||||||    
T  40246829 aaatcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattc 40246928  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  40246929 aaaatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaa 40247028  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||| |||| |||||    
T  40247029 aacatgagattccttatgattg 40247050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 54625482 - 54625798
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||| ||||||| ||||       |||||||||   | |||| |||||||||||||||||||| ||||||       ||     
T  54625482 ggtgtattggatcatgattctaagagattttagaagatttttttatcatgaaatttttttgtagtattcaatcaagactctttccaatttaaaaaaagtc 54625581  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||| |||| |||||||||        |||||| |||||||||||| ||||||||||||||       |||||||||||||||||||    
T  54625582 ttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 54625681  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  54625682 tattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtttttcatgaaaacat 54625781  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  54625782 gagatttcttaagattg 54625798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 500 - 716
Target Start/End: Complemental strand, 3999861 - 3999645
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        ||||||||||||||||||    
T  3999861 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaat 3999762  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||    
T  3999761 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaacat 3999662  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  3999661 gagatttcttaggattg 3999645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 404 - 716
Target Start/End: Original strand, 25418260 - 25418572
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||||||||||||||| |||||||||| |       ||||||||||  | ||||||||||||||||| ||||||| || |||       || ||||    
T  25418260 tattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgt 25418359  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||| ||| ||||||||||        ||||| ||||||||||||||||    
T  25418360 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcatt 25418459  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||  ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgaga 25418559  T
Q  704 tttcttaggattg 716  Q
    || ||||||||||    
T  25418560 ttccttaggattg 25418572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 146; E-Value: 2e-76
Query Start/End: Original strand, 400 - 715
Target Start/End: Original strand, 52114420 - 52114734
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||| |||||||||||||||||| |||||||||||       ||||||| |||||||||||||||||||||||  || ||||||||||        |     
T  52114420 ggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaaaaaaaatc 52114517  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaa 598  Q
    ||||||||||||| ||||||||||||||||||       |||||||||||||||||||| ||| ||||||||||        ||||||||||||||||||    
T  52114518 ttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattcaaaa 52114617  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    | |||||||||||| || ||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||  ||||||||    
T  52114618 taattcaaatttcgcaggattgtttaataaatcagattttgatagattttgtggaattttctagtaaaattttagcatgaaaaaatcttttgtgaaaaca 52114717  T
Q  699 tgagatttcttaggatt 715  Q
    |||||||||||||||||    
T  52114718 tgagatttcttaggatt 52114734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 400 - 701
Target Start/End: Complemental strand, 51699795 - 51699495
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||| |||  ||||||||||||       |||| |||||| | ||||||||||||||||||||||||||||||||       ||     
T  51699795 ggtgtattggatcatgattataaaagattttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 51699696  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||| |||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||        ||||||||||||||||||    
T  51699695 ttgtattattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaat 51699597  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||| ||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||    
T  51699596 cattcaaatttcgaaggattggttaataaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacat 51699497  T
Q  700 ga 701  Q
    ||    
T  51699496 ga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 402 - 708
Target Start/End: Original strand, 29029898 - 29030203
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||| | |||||||||||||||||||||| ||  ||||        || ||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagtctt 29029997  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    |||||||||||| |||| ||||||||||||       |||||||||||||||||||| ||||||||||||||       |||| ||||||||||||||||    
T  29029998 gtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaa-gtcttgtggtattcaaaatca 29030096  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    | ||| ||||||||||||    
T  29030097 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtggaattttctaatgaaattttaacatgaattttttttttatgaaaacatga 29030196  T
Q  702 gatttct 708  Q
    |||||||    
T  29030197 gatttct 29030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 506 - 710
Target Start/End: Complemental strand, 33996751 - 33996547
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        || |||||||||||||||||||||    
T  33996751 tattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattca 33996652  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  33996651 aatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagatt 33996552  T
Q  706 tctta 710  Q
    |||||    
T  33996551 tctta 33996547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 36674444 - 36674137
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  36674444 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 36674345  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  36674344 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 36674245  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  36674244 ttcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 36674145  T
Q  702 gatttctt 709  Q
    ||||||||    
T  36674144 gatttctt 36674137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 444 - 716
Target Start/End: Complemental strand, 53929390 - 53929128
Alignment:
Q  444 atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtctt 543  Q
    ||||||||||| | ||||||||||||||||||||||||||||||||       |          ||||||||||||||||||||||||       |||||    
T  53929390 atcatgaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaag----------ttcaatcaagattctttgtcatttaaaaaaagtctt 53929301  T
Q  544 gtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatgg 643  Q
    ||||||||||||||| ||||||||||||||       ||||||||||||||||||||||| |||| |||||  |||||||||||||| ||||||||||||    
T  53929300 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaatatcgaacgattgtttaataaataagattttgatgg 53929201  T
Q  644 attttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||||    
T  53929200 attttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattttttaggattg 53929128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 662
Target Start/End: Complemental strand, 1440265 - 1440006
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||| ||||||||||||| |||||||||| |       ||||||||||||||||||||||||||||||||||| ||||||||||       || ||    
T  1440265 tgtattgggtcatgattctaagagattttaaaatacttttt-atcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaa-gtctt 1440168  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnn-gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    ||||||||||||||||||||||||||||||        || ||||||||||||||||| ||||||||||||||       ||||||||||||||||||||    
T  1440167 gtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatc 1440068  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctag 662  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||| ||| |||||||||    
T  1440067 attcaaatttccaaggattgtttaataaatcagattttgatggattttatgggattttctag 1440006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 404 - 709
Target Start/End: Complemental strand, 44906825 - 44906520
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||||    
T  44906825 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgt 44906726  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    | ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||    
T  44906725 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 44906626  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||| || ||||| |||||||||||||| ||||||    
T  44906625 caaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaagatgaga 44906526  T
Q  704 tttctt 709  Q
    ||||||    
T  44906525 tttctt 44906520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 506 - 716
Target Start/End: Complemental strand, 6035263 - 6035053
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||| ||||||||||||       |||||| ||||||||||||| | | || |||||||       |||| ||| ||||||||||||||||    
T  6035263 tattcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattca 6035164  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||||||| | |||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  6035163 aatttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatt 6035064  T
Q  706 tcttaggattg 716  Q
    ||||| |||||    
T  6035063 tcttaagattg 6035053  T

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Target: chr3; HSP #25
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 11431463 - 11431725
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||||||       || ||||| |||||||| |||| ||||||||||||       |||||| |    
T  11431463 atgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgag 11431562  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||| ||       |||| |||||||||||||||||| ||||||||||| ||||||||||||||  ||||||| ||||||    
T  11431563 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttggtggatt 11431662  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  11431663 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 11431725  T

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Target: chr3; HSP #26
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 400 - 681
Target Start/End: Original strand, 22057653 - 22057933
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngt 498  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||| |||||||||||||||     ||||| ||||||       ||    
T  22057653 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaagt 22057749  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngt-cttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
     ||||||||||||||||||||||||||||||||          |||||||||||| ||||| |||||| |||||||        |||||||||||| |||    
T  22057750 cttgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaa 22057849  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa 681  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  22057850 atcattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

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Target: chr3; HSP #27
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 450 - 709
Target Start/End: Original strand, 40897084 - 40897343
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||| ||||||||||||||||||||| | ||| ||| ||       || ||||| |||||| |||||| ||||||||||||       |||||| ||||    
T  40897084 aaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaagtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggta 40897183  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||| || |||||||       ||||  ||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  40897184 ttcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 40897283  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40897284 tgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40897343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 500 - 709
Target Start/End: Original strand, 17946278 - 17946487
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||||||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||| ||||||||||    
T  17946278 ttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaaaat 17946377  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  17946378 cattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 17946477  T
Q  700 gagatttctt 709  Q
    ||||||||||    
T  17946478 gagatttctt 17946487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 539 - 709
Target Start/End: Original strand, 18749641 - 18749811
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||| |||||||||| |||||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  18749641 gtcttgaggtattcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 18749740  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18749741 gatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18749811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 34484246 - 34484037
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       || | ||||||||||||||    
T  34484246 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaat 34484147  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||| ||||||||||||| ||    
T  34484146 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagat 34484047  T
Q  700 gagatttctt 709  Q
    ||||||||||    
T  34484046 gagatttctt 34484037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 587 - 716
Target Start/End: Original strand, 5825139 - 5825268
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  ||||||||| |||||||||| ||||| |||||||||| ||||||||||||| ||    
T  5825139 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggct 5825238  T
Q  687 ttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||| |||||    
T  5825239 ttcatgaaaacatgagatttcttatgattg 5825268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 393 - 709
Target Start/End: Complemental strand, 31646607 - 31646293
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | ||||||| || | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       
T  31646607 taagggggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaa 31646508  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || || || ||||||||||||| ||||||| ||||       ||||||  |||||||||||| ||| || |||| ||        ||| |||||||    
T  31646507 aaaagtcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtat 31646408  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||  |||||||||| |||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||    
T  31646407 tcaaaatcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 31646308  T
Q  693 aaaacatgagatttctt 709  Q
    |||  ||||||||||||    
T  31646307 aaa--atgagatttctt 31646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 402 - 650
Target Start/End: Original strand, 10660427 - 10660675
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  10660427 tgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10660526  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       || | ||||||||||||||||    
T  10660527 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaaatca 10660626  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  10660627 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgt 10660675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 393 - 709
Target Start/End: Original strand, 26107144 - 26107460
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||  ||||||||||||||| ||| ||| ||       
T  26107144 taagggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaa 26107243  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
          || ||  || |||||||||||||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| |||||||    
T  26107244 aaagtcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtat 26107343  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||  ||||| ||||| ||||||| || |||||||| ||||||     
T  26107344 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcata 26107443  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  26107444 aaaagatgagatttctt 26107460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 54628780 - 54629043
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||| |||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||||| ||||||||||||       |||||| |    
T  54628780 atgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 54628879  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnng-tctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggat 645  Q
    |||||||||||| ||| || |||||           ||| |||||||||||||||||||||||||| ||| ||||||||||||||  |||||||||||||    
T  54628880 gtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttgatggat 54628979  T
Q  646 tttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||||||| ||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  54628980 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttctt 54629043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 392 - 709
Target Start/End: Complemental strand, 50903567 - 50903247
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | ||||||| || ||||||||| |||||||||||| |       |  |||||||||||||||||||||||||||||||| ||| ||| ||      
T  50903567 ttaagggggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 50903468  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn---gtctagtg 588  Q
         || ||||| ||||||||||||| ||||||||||||       |||||  ||||||||||||| ||| || |||| ||          |||| |||    
T  50903467 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtg 50903368  T
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtcttt 688  Q
    |||||||||||||||||||||  |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||| |||||    
T  50903367 gtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttt 50903268  T
Q  689 catgaaaacatgagatttctt 709  Q
     ||||||| ||||||||||||    
T  50903267 tatgaaaatatgagatttctt 50903247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 628 - 716
Target Start/End: Complemental strand, 6131321 - 6131233
Alignment:
Q  628 aatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6131321 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 6131233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 581 - 709
Target Start/End: Original strand, 32580247 - 32580375
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||||| || ||||| ||||| ||||||| || ||||    
T  32580247 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaa 32580346  T
Q  681 aagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||||||||| ||||||||||||    
T  32580347 aagtctttcatgaaaagatgagatttctt 32580375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 52618279 - 52617978
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||| ||| | ||||||| ||||||||||||||       || |||||||||||||||||||||| ||||||| | |||  || ||       ||  |    
T  52618279 tgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaaaaaaagtcat 52618180  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  52618179 gtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 52618080  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||      || ||||||||||| |||| ||||    
T  52618079 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaatttt------aacaagtctttcataaaaagatga 52617986  T
Q  702 gatttctt 709  Q
    ||||||||    
T  52617985 gatttctt 52617978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 395 - 709
Target Start/End: Original strand, 48379043 - 48379356
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||||| |||||||||| |||||||||  |||||||||||||       || || ||||||||| ||||||||||||||| | | ||| ||| ||         
T  48379043 agggagatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaaaa 48379142  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
       | ||||| | ||||||||||| ||||||||||||       |||||| ||||||||||| | ||| || |||||||       |||| |||||||||    
T  48379143 aaatcttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattc 48379241  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||| ||||| ||||| |||||||  | ||||| ||||||||||||    
T  48379242 aaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaa 48379341  T
Q  695 aacatgagatttctt 709  Q
    || || |||||||||    
T  48379342 aagatcagatttctt 48379356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 402 - 639
Target Start/End: Complemental strand, 23753700 - 23753463
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||||||  |||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  23753700 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 23753601  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||||||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  23753600 gtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 23753501  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||||||||||||| ||||||||||||||  |||||||    
T  23753500 ttcaaatttcgaaggattgtttaataaattggattttg 23753463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 581 - 716
Target Start/End: Original strand, 27899415 - 27899540
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||          |||||||||||||||||||||||    
T  27899415 gtctggtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgtaggattt----------tctagtgaaattttagcatgaaa 27899504  T
Q  681 aagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||| |||||||| |||||    
T  27899505 aagtctttcatgaaaacatgaaatttcttatgattg 27899540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 539 - 696
Target Start/End: Complemental strand, 51737903 - 51737746
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  51737903 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 51737804  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 696  Q
    |||||||||||||| ||||| | ||| ||||||| || ||||||||||||||| ||||    
T  51737803 gatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 500 - 709
Target Start/End: Original strand, 52810368 - 52810577
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||    
T  52810368 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 52810467  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||  ||||||||||||||   ||||||||||||||||||| ||||| ||| | ||||||| || |||||| ||||||||||||| ||    
T  52810468 cattcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagat 52810567  T
Q  700 gagatttctt 709  Q
    ||||||||||    
T  52810568 gagatttctt 52810577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 500 - 709
Target Start/End: Original strand, 39038030 - 39038229
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||| ||||||    
T  39038030 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaat 39038129  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||          ||||| ||||||| || ||||||||||||||| |||| ||    
T  39038130 cattcaaatttcgaagaattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcataaaaagat 39038219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 605 - 716
Target Start/End: Complemental strand, 1440005 - 1439894
Alignment:
Q  605 aaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 704  Q
    |||||| |||| |||||||||||||| |||||||||| |||||||||| |||||||||| ||||||| | |||||||||||||||| |||||||||||||    
T  1440005 aaatttggaaggattgtttaataaattagattttgatagattttgtgggattttctagtaaaattttggtatgaaaaagtctttcacgaaaacatgagat 1439906  T
Q  705 ttcttaggattg 716  Q
    || |||||||||    
T  1439905 tttttaggattg 1439894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 10728857 - 10728658
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||| |||||    
T  10728857 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaaaat 10728758  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  10728757 cattcaaatttggaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 10728668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 402 - 705
Target Start/End: Original strand, 20832887 - 20833187
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||| ||||||||||||||||||| | |||  || ||       || |     
T  20832887 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaa---gtctc 20832983  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| |||| |||||||| ||||||||||||       |||||| ||||||||||||| | | || |||||||       |||| ||||||||||||||||    
T  20832984 gtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaaatca 20833083  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||  |||| ||||||||||||||  |||||||||||||||||||  ||||  ||||| ||||||| || |||||||| ||||||||||| || |    
T  20833084 ttcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaagataa 20833183  T
Q  702 gatt 705  Q
    ||||    
T  20833184 gatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 50762364 - 50762067
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||| || ||||||||||||||       || |||||||||| ||||||||||||||||||||| ||| ||| ||       || ||    
T  50762364 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 50762265  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| | ||||||||||  ||| || || | ||       |||| ||||||||||||||||    
T  50762264 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaaatca 50762165  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||| |||||||||  ||||||| ||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||||    
T  50762164 ttctaatttcgaatgattgtttgataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatga 50762075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 395 - 486
Target Start/End: Complemental strand, 12734161 - 12734070
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaa 486  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||| |||||    
T  12734161 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctcttcaa 12734070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 499 - 709
Target Start/End: Original strand, 37454850 - 37455050
Alignment:
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    |||||| ||||||||||||||||||||||||||       |||||| | ||||||||||| ||| || |||| ||       |||| |||||||||||||    
T  37454850 tttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 37454949  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||  ||||||||||||||          || ||||||||| ||||| ||||| ||||||| || |||||||| ||||||||||| |    
T  37454950 tcattcaaatttcgaatgattgtttaataaat----------tgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaaga 37455039  T
Q  699 tgagatttctt 709  Q
    |||||||||||    
T  37455040 tgagatttctt 37455050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 581 - 716
Target Start/End: Complemental strand, 39842619 - 39842494
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||          || || ||||||| || ||||    
T  39842619 gtctcgtgatattcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttg----------taatgtaattttaacaagaaa 39842530  T
Q  681 aagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||| |||||||||||| ||||||    
T  39842529 aagtctttcatgaaaagatgagatttcttgggattg 39842494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 582 - 716
Target Start/End: Original strand, 52079999 - 52080117
Alignment:
Q  582 tctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa 681  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||||          |||||||||| |||||||| |||||||||||||||||||    
T  52079999 tctagtggtattcaaaatcattcaaattttgaaggattgtttaataaatca----------gattttgtgggattttctaatgaaattttagcatgaaaa 52080088  T
Q  682 agtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||      ||||||||||||||||||||||||||    
T  52080089 agt------tgaaaacatgagatttcttaggattg 52080117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 590 - 684
Target Start/End: Original strand, 55235264 - 55235359
Alignment:
Q  590 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatgga-ttttgtggaattttctagtgaaattttagcatgaaaaagt 684  Q
    |||||||||||||||||||||||||  ||||||||||||||  | |||||||||| |||||||| |||||||| |||||||||||||| |||||||    
T  55235264 tattcaaaatcattcaaatttcgaaagattgtttaataaattggtttttgatggatttttgtgggattttctaatgaaattttagcataaaaaagt 55235359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 715
Target Start/End: Original strand, 44276329 - 44276580
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    |||||||| ||||||||||||| ||||||||||  |||||       || ||||| |||||||| || | ||||||||||||       |||||| ||||    
T  44276329 aaaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggta 44276428  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| | | || |||||||       ||||  |||||||||||||||||||||||    || ||||||||||||||          |||||||||    
T  44276429 ttcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaat----------tggattttg 44276514  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 715  Q
    ||| ||||||||||||||||||| || |||||| ||||||||||| ||||||||||| || |||||    
T  44276515 tgggattttctagtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggatt 44276580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 663 - 716
Target Start/End: Complemental strand, 33807733 - 33807680
Alignment:
Q  663 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33807733 tgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 33807680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 573
Target Start/End: Original strand, 18749455 - 18749633
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||| | |||||||  | |||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||         
T  18749455 agggcggtgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 18749554  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcactt 573  Q
      || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||||||| || |||||||    
T  18749555 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactt 18749633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 581 - 698
Target Start/End: Original strand, 6975817 - 6975924
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| |||||||||||||||||||||||||||||||||| |||| |||||          |||| ||||||| |||||||||| |||||| |||||||||    
T  6975817 gtcttgtggtattcaaaatcattcaaatttcgaagaattatttactaaat----------tggaatttgtgggattttctagtaaaatttgagcatgaaa 6975906  T
Q  681 aagtctttcatgaaaaca 698  Q
     |||||||||||||||||    
T  6975907 cagtctttcatgaaaaca 6975924  T

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Target: chr3; HSP #59
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 581 - 644
Target Start/End: Complemental strand, 539539 - 539476
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatgga 644  Q
    |||| |||||||||||||||||||||||||||||| ||| ||||||||||  ||||||||||||    
T  539539 gtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattggattttgatgga 539476  T

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Target: chr3; HSP #60
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 531
Target Start/End: Complemental strand, 27240557 - 27240428
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  27240557 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 27240458  T
Q  502 gtgttattcaatcaagattctttgtcattt 531  Q
    ||| ||||||||||||| ||||||||||||    
T  27240457 gtggtattcaatcaagactctttgtcattt 27240428  T

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Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 444 - 531
Target Start/End: Complemental strand, 6131484 - 6131398
Alignment:
Q  444 atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcattt 531  Q
    ||||||||||||| ||||||||||||||||||||||||| ||| ||       || |||||||||||||||||||| | |||||||||    
T  6131484 atcatgaaaaagttttgtggtattcaatcaagactctttccaa-ttgaaaaaagtcttgtgttattcaatcaagatccattgtcattt 6131398  T

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Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 489
Target Start/End: Complemental strand, 15494045 - 15493958
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    |||||||||| || |||||||||||||||||||||       || |||||||| |||||| ||||| |||||||||||||| ||||||    
T  15494045 tgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaattt 15493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 482
Target Start/End: Complemental strand, 10728923 - 10728833
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||||| | |||||||||| |  |||||| || |||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  10728923 ttaagggggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 10728833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 497 - 570
Target Start/End: Complemental strand, 6131390 - 6131317
Alignment:
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatca 570  Q
    |||||||||||||||||||||| || |||||||||       || ||||||||||||||||| |||||||||||    
T  6131390 gttttgtgttattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatca 6131317  T

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Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 39842743 - 39842667
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||| |||||||||||||||||||||    
T  39842743 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagact 39842667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 654 - 709
Target Start/End: Original strand, 45862985 - 45863040
Alignment:
Q  654 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  45862985 attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 45863040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 482
Target Start/End: Original strand, 52810312 - 52810392
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||| | ||||||| ||||||||||||||       |  |||||||||| |||||||||||||||||||||||||    
T  52810312 tgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactcttt 52810392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 542 - 637
Target Start/End: Complemental strand, 23535984 - 23535890
Alignment:
Q  542 ttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattt 637  Q
    |||||| ||||||||||| ||||| |||||||       |||| ||||||||||||||||||||||||| |||| || ||||||| ||| ||||||    
T  23535984 ttgtggcattcaatcaaa-ctcttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagattt 23535890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 16010748 - 16010789
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaaga 436  Q
    |||| ||||||||||||||| |||||||||||||||||||||    
T  16010748 aggggggtgtattggatcataattctaagggattttaaaaga 16010789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 52079883 - 52079965
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    |||||||||||||||||||||||| ||||||||||          | |||||||| |||||||||||||||||| || ||||||||||||    
T  52079883 ggtgtattggatcatgattctaagtgattttaaaa-------tttttatgaaaaaatcttgtggtattcaatcatgattcttttcaattt 52079965  T

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Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Original strand, 6975731 - 6975763
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  6975731 aaaaagtcttgtggtattcaatcaagactcttt 6975763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 641 - 709
Target Start/End: Complemental strand, 15492942 - 15492874
Alignment:
Q  641 tggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||| | || |||||||||||||||| || |||||| |||||||||||  ||| |||||||||    
T  15492942 tggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttctt 15492874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Complemental strand, 33996807 - 33996771
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaaga 436  Q
    ||||||||||||||||||||||||||||||| |||||    
T  33996807 ggtgtattggatcatgattctaagggattttgaaaga 33996771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 34484254 - 34484222
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  34484254 aaaaagtcttgtggtattcaatcaagactcttt 34484222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 51737951 - 51737919
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  51737951 aaaaagtcttgtggtattcaatcaagactcttt 51737919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 482
Target Start/End: Complemental strand, 539695 - 539615
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||| | | ||||||| ||||||||||||       || ||||||||| |||||||||||||||||| |||||||    
T  539695 tgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactcttt 539615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 478
Target Start/End: Original strand, 2024144 - 2024175
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagact 478  Q
    ||||||||||||||||||||||||||||||||    
T  2024144 atgaaaaagtcttgtggtattcaatcaagact 2024175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 481
Target Start/End: Complemental strand, 3999827 - 3999796
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||    
T  3999827 aaaaagtcttgtggtattcaatcaagactctt 3999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 654 - 708
Target Start/End: Original strand, 12103734 - 12103789
Alignment:
Q  654 attttctagtgaaattttagcatgaaaaagtctttcatgaaaaca-tgagatttct 708  Q
    ||||||||||||||||||| || ||| |||||||||||||| ||| ||||||||||    
T  12103734 attttctagtgaaattttaacaagaataagtctttcatgaagacattgagatttct 12103789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Original strand, 17946267 - 17946302
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||| |||||    
T  17946267 atgaaaaagtcttgtggtattcaatcaagattcttt 17946302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 481
Target Start/End: Complemental strand, 33996723 - 33996692
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||    
T  33996723 aaaaagtcttgtggtattcaatcaagactctt 33996692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Original strand, 38772314 - 38772349
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||| |||||    
T  38772314 atgaaaaagtcttgtggtattcaatcaagattcttt 38772349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 212; Significance: 1e-116; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 393 - 716
Target Start/End: Original strand, 24776240 - 24776563
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||  |||||       
T  24776240 taaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaa 24776339  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||    
T  24776340 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 24776439  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24776440 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 24776539  T
Q  693 aaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||    
T  24776540 aaaacatgagatttcttaggattg 24776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 16269583 - 16269899
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||| ||||||       ||     
T  16269583 ggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 16269682  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  16269683 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 16269782  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  16269783 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaacat 16269882  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  16269883 gagatttcttaggattg 16269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 205; E-Value: 1e-111
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 31170942 - 31170626
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||| ||||||       ||     
T  31170942 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtc 31170843  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  31170842 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 31170743  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  31170742 cattcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 31170643  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  31170642 gagatttcttaggattg 31170626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 400 - 710
Target Start/End: Original strand, 35316954 - 35317264
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| ||||||||||||||||||||||||| |       ||||||||||||||||||||||||||||||||||||||| ||||||       |||    
T  35316954 ggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtt 35317053  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||  ||||||||||| ||||||||||||||       |||||||||||||||||||    
T  35317054 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 35317153  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  35317154 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 35317253  T
Q  700 gagatttctta 710  Q
     ||||||||||    
T  35317254 aagatttctta 35317264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 394 - 716
Target Start/End: Complemental strand, 14198900 - 14198579
Alignment:
Q  394 aagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnn 493  Q
    ||||| |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||  |||||        
T  14198900 aagggtggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaa 14198801  T
Q  494 nnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtatt 593  Q
       || ||||||||||||||||| ||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||| |||||||||    
T  14198800 aa-gtcttgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtatt 14198702  T
Q  594 caaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatga 693  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  14198701 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatga 14198602  T
Q  694 aaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||    
T  14198601 aaacatgagatttcttaggattg 14198579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 12407272 - 12407588
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||| ||||||||||||       ||     
T  12407272 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaagtc 12407371  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||| | ||||||||||||||       |||||||||||||||||||    
T  12407372 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaat 12407471  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  12407472 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacat 12407571  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  12407572 gagatttcttaagattg 12407588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 450 - 716
Target Start/End: Original strand, 20605178 - 20605444
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||||||||||||||||||       |||||||||||    
T  20605178 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 20605277  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||||||||||||||       ||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  20605278 ttcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttg 20605377  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20605378 tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 20605444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 22552081 - 22551765
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||| | ||| ||||||       ||     
T  22552081 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtc 22551982  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||| ||||||||||       |||||||||||||||||||    
T  22551981 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaat 22551882  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||||||  |||||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  22551881 tattcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacat 22551782  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  22551781 gagatttcttatgattg 22551765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 43847538 - 43847854
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||| |||||||  |||||||||||||||||||       ||| |||||||||||| | |||||||| ||| ||||||| ||||||       ||     
T  43847538 ggtgtattagatcatgtatctaagggattttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaagtc 43847637  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||| |||||||||||    
T  43847638 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaat 43847737  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  43847738 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacat 43847837  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  43847838 gagatttcttaggattg 43847854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 305785 - 305467
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-g 497  Q
    |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||        |    
T  305785 ggtgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaag 305686  T
Q  498 ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    | ||||||||||||||||||||| ||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||    
T  305685 tcttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 305586  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    ||||||||||||| |||  ||||||||||||||||||||| |||||||||||||  |||||||||||||||||||| |||||||||||||||||||||||    
T  305585 atcattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaac 305486  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  305485 atgagatttcttaggattg 305467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 395 - 696
Target Start/End: Original strand, 1789329 - 1789630
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||| ||||||||||||       ||||| ||||||||||||||||||||||||| ||||||| ||||||         
T  1789329 aggggggtgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaa 1789428  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || ||||||||||||||||||||||||||||||||       ||||| || ||||||||||||||||||||||||||       ||||||||||||||    
T  1789429 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattc 1789528  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||    
T  1789529 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaa 1789628  T
Q  695 aa 696  Q
    ||    
T  1789629 aa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 398 - 716
Target Start/End: Original strand, 44765665 - 44765974
Alignment:
Q  398 gaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnng 497  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||| ||||||       |    
T  44765665 gaggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaag 44765764  T
Q  498 ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    | ||||||||||||||||||||||||||||||||       |||||||||||||||||| | ||||||||||||||       |||||||||||||||||    
T  44765765 tcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaa 44765864  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||  |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||         ||||||||||||    
T  44765865 atcattcaaatttcgaaagattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcat---------tttcatgaaaac 44765955  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  44765956 atgagatttcttaggattg 44765974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 403 - 716
Target Start/End: Complemental strand, 5093352 - 5093049
Alignment:
Q  403 gtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttg 502  Q
    ||||||||||||||||||||||||||||||||||           ||||||  ||||||||||||||||||||||||||| ||||||       || |||    
T  5093352 gtattggatcatgattctaagggattttaaaagac----------tgaaaatatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttg 5093263  T
Q  503 tgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcat 602  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||| || |||||||||||       ||||||| ||||||||||||||    
T  5093262 tgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcat 5093163  T
Q  603 tcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 702  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  5093162 tcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcataaaaacatgag 5093063  T
Q  703 atttcttaggattg 716  Q
    ||||||||||||||    
T  5093062 atttcttaggattg 5093049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 410 - 710
Target Start/End: Original strand, 32125152 - 32125455
Alignment:
Q  410 atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttatt 509  Q
    ||||||||| |||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||       || ||||||||||    
T  32125152 atcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttatt 32125251  T
Q  510 caatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaat---cacttnnnnnnngtctagtggtattcaaaatcattcaa 606  Q
    ||||||| ||||||||||||||       ||| |||||||||||||||| |||||||||   || ||       ||| ||||||||||||||||||||||    
T  32125252 caatcaaaattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaa 32125351  T
Q  607 atttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
    ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| |||||||||    
T  32125352 atttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagattt 32125451  T
Q  707 ctta 710  Q
    ||||    
T  32125452 ctta 32125455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 28844449 - 28844756
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  28844449 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 28844548  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  28844549 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 28844648  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||  | ||||||||||||||| |||| ||||    
T  28844649 ttcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaagatga 28844748  T
Q  702 gatttctt 709  Q
    ||||||||    
T  28844749 gatttctt 28844756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 393 - 709
Target Start/End: Original strand, 33135508 - 33135823
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | |||||||  |||||||||||||       || ||||||||||||| |||||||||||||||||| ||| ||||||       
T  33135508 taagggggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaa 33135607  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||    
T  33135608 aaaagtattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtat 33135707  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||     
T  33135708 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat- 33135806  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  33135807 aaaaaatgagatttctt 33135823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 539 - 716
Target Start/End: Original strand, 9120157 - 9120334
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||| ||||||||||| | ||||||||||||        ||||||| |||||||||||||||| ||||  ||| |||||||||||||| |||||||    
T  9120157 gtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcattcagattttaaaggattgtttaataaattagatttt 9120256  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||| |||||||||||||||||||| ||| |||| |||||||||||||||||||||||||||||||||    
T  9120257 gatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgagatttcttaggattg 9120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 393 - 691
Target Start/End: Original strand, 26788669 - 26788969
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       
T  26788669 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaa 26788768  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn--gtctagtggt 590  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| |          |||| |||||    
T  26788769 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggt 26788868  T
Q  591 attcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttca 690  Q
    |||||||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||    
T  26788869 attcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttca 26788968  T
Q  691 t 691  Q
    |    
T  26788969 t 26788969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 10657345 - 10657607
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||||||| ||||||||||||||||| || |||  || ||       || ||||| |||||||||||||| |||||||||||       || ||| |    
T  10657345 atgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaaaaaagtcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgag 10657444  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  10657445 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 10657544  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||| ||||||||||| |||| |||||||    
T  10657545 ttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgaaatttctt 10657607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 403 - 709
Target Start/End: Complemental strand, 28740598 - 28740302
Alignment:
Q  403 gtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttg 502  Q
    ||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||| ||| ||| ||| ||       || |||    
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  503 tgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcat 602  Q
    || ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 28740399  T
Q  603 tcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 702  Q
    ||||||||||||| ||||||||||||||  |||||||||||||||||||          ||| ||||||| || ||||||||||||||| |||| |||||    
T  28740398 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtg----------gtgtaattttaacaagaaaaagtctttcataaaaagatgag 28740309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 400 - 565
Target Start/End: Original strand, 20605044 - 20605209
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  20605044 ggtgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 20605143  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactctt 565  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||    
T  20605144 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactctt 20605209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 400 - 648
Target Start/End: Complemental strand, 26601518 - 26601270
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||| |||||| |||||||||||||       || || ||||||||||||||||||||||||| |||||||  |||||       |||    
T  26601518 ggtgtattggatcatgtttctaaaggattttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaagtt 26601419  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||| |||||||| |||||||||||        ||||||| |||||||||||| ||||||||||||||       |||  ||||||||||||||    
T  26601418 ttgtgttatttaatcaagactctttgtcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaat 26601319  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||||||||   ||||||||||||||||||||||  |||||||    
T  26601318 cattcaaatttcgaatgtttgtttaataaatcagattttgtgggatttt 26601270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 501 - 709
Target Start/End: Original strand, 25288152 - 25288360
Alignment:
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    |||| ||||||||||||| ||||||||||||       |||||| |||||||| |||| ||| || |||||||        ||| |||||||||||||||    
T  25288152 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatc 25288251  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||| || || || |||||||||||||| |||    
T  25288252 attcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatg 25288351  T
Q  701 agatttctt 709  Q
    |||||||||    
T  25288352 agatttctt 25288360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 450 - 650
Target Start/End: Original strand, 7026546 - 7026746
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||||| ||||||||||||       |||||| ||||    
T  7026546 aaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggta 7026645  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||| || |||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  7026646 ttcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 7026745  T
Q  650 t 650  Q
    |    
T  7026746 t 7026746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 506 - 709
Target Start/End: Original strand, 18177265 - 18177468
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       || | ||||||||||||||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||||||| |||||||||| |||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||| || |||| ||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  706 tctt 709  Q
    ||||    
T  18177465 tctt 18177468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 416 - 716
Target Start/End: Complemental strand, 10125594 - 10125302
Alignment:
Q  416 attctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatca 515  Q
    |||||||| ||||||||||||       || |||||||||||| |||  |||||||||||||||||| ||||||       |||||||| ||||||||||    
T  10125594 attctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaagttttgtggtattcaatca 10125495  T
Q  516 agattctttgtcatttnnnnnnngtcttgtgg--tattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcga 613  Q
    ||| ||||||||||||       ||||| ||   ||||||||||||||| || |||||||       ||||  || |||||||||||||||||||||| |    
T  10125494 agactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattcaaaatcattcaaatttcaa 10125395  T
Q  614 agaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttagga 713  Q
    || ||||||||||||||          || ||||||||| ||||| ||||||||||||| || ||||||||||||||| |||||| ||||||||||| ||    
T  10125394 aggattgtttaataaat----------tgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagatttcttaaga 10125305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 391 - 709
Target Start/End: Original strand, 3463554 - 3463863
Alignment:
Q  391 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttn 490  Q
    |||||||| | |||||||||| ||||||||| | ||||||||||||       || |||||||| ||||||||||||||||||||||| ||| ||||||     
T  3463554 gttaagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaattta 3463653  T
Q  491 nnnnnngttttgtgttattcaatcaag-attctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtgg 589  Q
          || || |  |||||||||||| | ||||||||||||       |||||| ||| ||||||||| ||| || |||| ||       |||| ||||    
T  3463654 aaaaaagtcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtgg 3463753  T
Q  590 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttc 689  Q
    |||| |||||||||||| |||| ||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||    
T  3463754 tatttaaaatcattcaattttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttc 3463843  T
Q  690 atgaaaacatgagatttctt 709  Q
    ||||||| ||||||||||||    
T  3463844 atgaaaatatgagatttctt 3463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 400 - 523
Target Start/End: Original strand, 9120060 - 9120183
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||| || |||||||||||||||||||||||| ||||||       ||     
T  9120060 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattttaaaaaagtc 9120159  T
Q  500 ttgtgttattcaatcaagattctt 523  Q
    ||||||||||||||||||||||||    
T  9120160 ttgtgttattcaatcaagattctt 9120183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 13833738 - 13833441
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||| ||||||||||||||||||||| ||| ||| ||       || ||    
T  13833738 tgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 13833639  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| | ||| ||||||       ||||||   ||||||||||| ||| || |||||||       ||||  |||||||||||||||    
T  13833638 gtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaaatca 13833539  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || ||||||||||||||||| || ||||    
T  13833538 ttcaaattttgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatga 13833449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 598 - 709
Target Start/End: Original strand, 43078653 - 43078764
Alignment:
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||  ||||||||||||||  |||||| ||||||||||||| ||||| ||||| ||||||| |||||||||||||||||| ||||     
T  43078653 atcattcaaatttcgaatgattgtttaataaattggattttcatggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaag 43078752  T
Q  698 atgagatttctt 709  Q
    || |||||||||    
T  43078753 ataagatttctt 43078764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 447 - 639
Target Start/End: Original strand, 3574786 - 3574978
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||| ||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||||| |  |||||||||       |||||| |    
T  3574786 atgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgag 3574885  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||||||||||| ||| || |||||||       |||| ||| |||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  3574886 gtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 3574978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 402 - 623
Target Start/End: Complemental strand, 215541 - 215320
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  215541 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 215442  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||| ||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  215441 gtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatca 215342  T
Q  602 ttcaaatttcgaagaattgttt 623  Q
    |||||| ||| ||| |||||||    
T  215341 ttcaaacttcaaaggattgttt 215320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 392 - 478
Target Start/End: Original strand, 378863 - 378949
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  378863 ttaagggggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 378949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 587 - 650
Target Start/End: Original strand, 379016 - 379079
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  ||||||||| ||||||||    
T  379016 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgt 379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 400 - 488
Target Start/End: Original strand, 19144916 - 19145004
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatt 488  Q
    |||||||||||  |||||||||||||||||||||| |       ||||| ||||||||||||||||||||||||| |||| ||||||||    
T  19144916 ggtgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaatt 19145004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 476
Target Start/End: Original strand, 43078569 - 43078643
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaga 476  Q
    |||||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||||    
T  43078569 tgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaaga 43078643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 654 - 709
Target Start/End: Complemental strand, 6224631 - 6224576
Alignment:
Q  654 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6224631 attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 581 - 639
Target Start/End: Complemental strand, 6224684 - 6224626
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||| |||||||||||||| ||||||||||||||| ||| ||||||||||  |||||||    
T  6224684 gtcttgtggtattcaaaattattcaaatttcgaaggattatttaataaattggattttg 6224626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 581 - 630
Target Start/End: Complemental strand, 21370687 - 21370638
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaat 630  Q
    |||| ||||||||||||||||||||||||| |||| ||||||| ||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaat 21370638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 654 - 707
Target Start/End: Complemental strand, 215301 - 215249
Alignment:
Q  654 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 707  Q
    ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||    
T  215301 attttgtagtgtaattttaaca-gaaaaagtctttcatgaaaagatgagatttc 215249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 210; Significance: 1e-114; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 210; E-Value: 1e-114
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 21146953 - 21147274
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||||||||||||||||       |||||||||||||| |||||||||||||||||||||||| ||||||         
T  21146953 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaa 21147052  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  21147053 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 21147152  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21147153 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 21147252  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||    
T  21147253 aacatgagatttcttaggattg 21147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 33656358 - 33656040
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||| |||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||       ||     
T  33656358 ggtgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 33656259  T
Q  500 ttgtgttattcaatcaagattcttt--gtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    |||||||||||||||||||||||||  |||||||       |||||||||||||||||||| ||||||||||||||        |||| |||||||||||    
T  33656258 ttgtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaa 33656159  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||     
T  33656158 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaat 33656059  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  33656058 atgagatttcttaggattg 33656040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 27459264 - 27458949
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||| ||||||||||| |       ||||||||||||||| || |||||||||||||||||||| ||||||       ||     
T  27459264 ggtgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaagtc 27459165  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||||||| |||||||||||||||||       ||||||| |||||||||||| ||||||||||||||       |||||||||||||||||||    
T  27459164 ttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaa-gtctagtggtattcaaaat 27459066  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||| |||| |||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||    
T  27459065 cattcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacat 27458966  T
Q  700 gagatttcttaggattg 716  Q
    || ||||||||||||||    
T  27458965 gatatttcttaggattg 27458949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 404 - 710
Target Start/End: Complemental strand, 32158210 - 32157899
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gttttg 502  Q
    ||||| ||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||        || |||    
T  32158210 tattgaatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttg 32158111  T
Q  503 tgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaatca 601  Q
    |||||||||||||||||||||||||||||       |||||||||||||||||||| || | |||||||||        |||||||||||||||||||||    
T  32158110 tgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatca 32158011  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa---agtctttcatgaaaaca 698  Q
    |||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||||||| |||||   |||||||||||||||||    
T  32158010 ttcaaatttcgaaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaaca 32157911  T
Q  699 tgagatttctta 710  Q
    ||||||||||||    
T  32157910 tgagatttctta 32157899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 447 - 710
Target Start/End: Original strand, 139211 - 139474
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||||||||| | |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||| ||||    
T  139211 atgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtg 139310  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| ||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  139311 gtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaaccagattttgatggatt 139410  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 710  Q
    |||| | |||||| ||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  139411 ttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctta 139474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 450 - 710
Target Start/End: Complemental strand, 5273184 - 5272924
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||| ||||||||||||| | |||   ||||       || ||||| ||||||||||||||||||||||||||       ||||| |||||    
T  5273184 aaaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggta 5273085  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||||||||||| ||       ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||    
T  5273084 ttcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttg 5272985  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctta 710  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  5272984 tgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctta 5272924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 400 - 682
Target Start/End: Original strand, 6460683 - 6460965
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||| ||| ||       ||     
T  6460683 ggtgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagtc 6460782  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    || |||||||||||||||||||||||||||||       ||| ||| |||||||||||| ||||||||||| ||        ||||||||||||||||||    
T  6460783 ttatgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaat 6460882  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaa 682  Q
    ||||||||||||||||  |||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||    
T  6460883 cattcaaatttcgaaggtttgtttaataaatcagattttgatggattttgagggattttctagtgaaattttatcatgaaaaa 6460965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 539 - 716
Target Start/End: Complemental strand, 7016915 - 7016738
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    ||||||| |||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7016915 gtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7016816  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  7016815 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttagaattg 7016738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 402 - 706
Target Start/End: Complemental strand, 4550570 - 4550266
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  4550570 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 4550471  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       | |||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  4550470 gtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 4550371  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||| ||||||||||||||| ||||    
T  4550370 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaagatga 4550271  T
Q  702 gattt 706  Q
    |||||    
T  4550270 gattt 4550266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 14000418 - 14000111
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||        | ||    
T  14000418 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatctt 14000319  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  14000318 gtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 14000219  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  14000218 ttcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 14000119  T
Q  702 gatttctt 709  Q
    ||||||||    
T  14000118 gatttctt 14000111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 539 - 696
Target Start/End: Original strand, 849177 - 849334
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||||||||||       ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  849177 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 849276  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 696  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  849277 gatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 402 - 716
Target Start/End: Complemental strand, 1152416 - 1152102
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||| |||||||||||| |||||||| | ||| ||| ||       || ||    
T  1152416 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaaagtctt 1152317  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  1152316 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaaatca 1152217  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||| | ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||| ||||||| ||||    
T  1152216 ttcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatga 1152117  T
Q  702 gatttcttaggattg 716  Q
    ||||||||| |||||    
T  1152116 gatttcttaagattg 1152102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 13925869 - 13926131
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||||||||||||||||| |||||||||| ||| ||| ||       |||||||| ||||||||||||| ||||||||||||       |||||| |    
T  13925869 atgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 13925968  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| | | || || ||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  13925969 gtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 13926068  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||| ||||| |||| |||||||    
T  13926069 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgatatttctt 13926131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 509 - 709
Target Start/End: Complemental strand, 7947779 - 7947579
Alignment:
Q  509 tcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 608  Q
    |||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| | | |||||||||||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  609 ttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 708  Q
    ||||||| ||||||||||||||  |||||||||||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| | |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  709 t 709  Q
    |    
T  7947579 t 7947579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 444 - 676
Target Start/End: Complemental strand, 14465497 - 14465266
Alignment:
Q  444 atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtctt 543  Q
    |||||||||||||||||||||||||||| || ||||||| ||||||       || | | || |||||||||||| ||||||||||||       || ||    
T  14465497 atcatgaaaaagtcttgtggtattcaattaaaactctttccaatttaaaaaaagtctggggt-attcaatcaagactctttgtcatttaaaaaaagtttt 14465399  T
Q  544 gtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatgg 643  Q
     |||||||||||||| |||||| ||| |||       |||| |||||||||||||||||||||||||||||  ||||||||||||||| ||||||||||     
T  14465398 ctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcggattttgatga 14465299  T
Q  644 attttgtggaattttctagtgaaattttagcat 676  Q
    |||||||||||||||||||| | ||||||||||    
T  14465298 attttgtggaattttctagtaatattttagcat 14465266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 4240765 - 4240468
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||| ||||||||||||||||||||| ||| ||| ||        | ||    
T  4240765 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatctt 4240666  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  4240665 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 4240566  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||| | ||||    
T  4240565 ttcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaatagatga 4240476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 581 - 709
Target Start/End: Original strand, 39852417 - 39852545
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| |||||||||||||||||||||||||||||| |||||||| |||||  |||||||||||||||| ||| ||||| ||||| ||||||| || ||||    
T  39852417 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaa 39852516  T
Q  681 aagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||||||||| ||||||||||||    
T  39852517 aagtctttcatgaaaagatgagatttctt 39852545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 392 - 709
Target Start/End: Original strand, 5948992 - 5949298
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | ||| |||||| | ||||||| ||||||||||||||       || |||||||| | ||||||||||||||||| ||| ||| ||| ||      
T  5948992 ttaagggggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaa 5949091  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggta 591  Q
         || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||||| | || |||||||        ||| ||||||    
T  5949092 aaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggta 5949190  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 691  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||    
T  5949191 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcat 5949280  T
Q  692 gaaaacatgagatttctt 709  Q
    ||||| ||||||||||||    
T  5949281 gaaaagatgagatttctt 5949298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 401 - 716
Target Start/End: Original strand, 9689553 - 9689864
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||| |||||||||||||||||||| |||       || |||||||||||||||||||||||||||||||||||| ||| ||       ||      
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt-attatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcg 9689651  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    | || ||||||||||||| |||| |||||||          | ||||||||||||||| |||||| |||||||       |||| |||||||| ||||||    
T  9689652 tctggtattcaatcaagactctt-gtcatttaaaaaaaca-tcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatc 9689749  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||| ||||||||||  ||||||| |||||| ||||||||||||||| ||||  ||||||| || ||||||||  ||||||||||||||||| |||||||     
T  9689750 att-aaatttcgaatgattgtttgataaattagattttgatggattgtgtgagattttcttgtaaaattttattatgaaaaagtctttcataaaaacata 9689848  T
Q  701 agatttcttaggattg 716  Q
    |||||||||| |||||    
T  9689849 agatttcttatgattg 9689864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 402 - 639
Target Start/End: Original strand, 37013807 - 37014044
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| ||||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  37013807 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 37013906  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| | ||||||||||||||    
T  37013907 gtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattcaaaatca 37014006  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    ||||||||||||||  |||||||||||||  |||||||    
T  37014007 ttcaaatttcgaagggttgtttaataaattggattttg 37014044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 40013970 - 40013718
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||| ||||||||||||||| ||| ||||||       || ||||| ||||||||||||| ||||||||||||       |||||| |    
T  40013970 atgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 40013871  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||| ||        ||| ||| |||||||||||||||||||||||||| |||||||||| |||  |||||| |||||||    
T  40013870 gtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaaatcattcaaatttcgaaggattgtttaatcaattggattttaatggatt 40013771  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||          ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40013770 ttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 40013718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 447 - 716
Target Start/End: Original strand, 22746235 - 22746496
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||| || |||||| ||| ||| ||       || ||||| ||||||||||| | ||||||||||||       |||||| |    
T  22746235 atgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgag 22746334  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||||||| || |||||||       |||| ||| |||||||||||||||||||||||||  ||||||||||||||   |||||||||||||    
T  22746335 gtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaaatcattcaaatttcgaatgattgtttaataaattgaattttgatggatt 22746434  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||| |        || ||||||| || |||||| ||||||||||||| || |||||||||| |||||    
T  22746435 ttgtggga--------tgtaattttaacaagaaaaactctttcatgaaaagataagatttcttaagattg 22746496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 7017012 - 7016923
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  7017012 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 7016923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 401 - 558
Target Start/End: Complemental strand, 5273276 - 5273118
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatg-aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||| |||||||||||||||||       |||||| ||||| ||||||||||||||||||||| ||||| ||||||       ||     
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtc 5273177  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaa 558  Q
    ||||||||||||||||||||| ||||||||||       |||||||| |||||||||||    
T  5273176 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaa 5273118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 650
Target Start/End: Complemental strand, 1461353 - 1461203
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||| ||||       |||||| ||||||||||||| ||| || |||||||       |||| | | ||||||||||    
T  1461353 ttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattcaaaat 1461254  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  1461253 cattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 1461203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 480
Target Start/End: Original strand, 43319132 - 43319218
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaaga-nnnnnnnatcatgaaaaagtcttgtggtattcaatcaagactct 480  Q
    |||| |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||    
T  43319132 aggggggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactct 43319218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 506 - 716
Target Start/End: Complemental strand, 9220916 - 9220716
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||| | ||||||||||||       |||||||| ||||||||||| |||||| |||||||       ||||  || ||||||||||||||||    
T  9220916 tattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattcaatcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattca 9220817  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||| ||| |||||||||| ||| ||| ||||  ||||||| |          ||| |||||||| || ||||||||||||| ||||||||||| |||    
T  9220816 aatttctaaggattgtttaatgaattagaatttgtaggattttat----------agtaaaattttaacacgaaaaagtctttcgtgaaaacatgatatt 9220727  T
Q  706 tcttaggattg 716  Q
    |||||||||||    
T  9220726 tcttaggattg 9220716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 399 - 523
Target Start/End: Complemental strand, 16894175 - 16894052
Alignment:
Q  399 aggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngt 498  Q
    |||||||||||||||| |||||||||||||||||||||       ||||| ||||| ||||||||||||||||||| | ||||| ||||||       ||    
T  16894175 aggtgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagt 16894077  T
Q  499 tttgtgttattcaatcaagattctt 523  Q
     ||||| ||||||||||||| ||||    
T  16894076 cttgtggtattcaatcaagactctt 16894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 444 - 481
Target Start/End: Original strand, 849166 - 849203
Alignment:
Q  444 atcatgaaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||||||||    
T  849166 atcatgaaaaagtcttgtggtattcaatcaagactctt 849203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 7948630 - 7948554
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    |||||||||| | |||||||  |||||||||||||       || |||||||||||| |||||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagact 7948554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 539 - 573
Target Start/End: Complemental strand, 16894078 - 16894044
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcactt 573  Q
    |||||||||||||||||||| ||||||||||||||    
T  16894078 gtcttgtggtattcaatcaagactcttaatcactt 16894044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 447 - 480
Target Start/End: Complemental strand, 1511620 - 1511587
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactct 480  Q
    |||||||||||||||||| |||||||||||||||    
T  1511620 atgaaaaagtcttgtggtgttcaatcaagactct 1511587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 482
Target Start/End: Complemental strand, 9220889 - 9220856
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||| |||||||||||||||||||    
T  9220889 gaaaaagtcttgtgatattcaatcaagactcttt 9220856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 206; Significance: 1e-112; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 395 - 716
Target Start/End: Complemental strand, 6197798 - 6197477
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| ||||||||||||||||||||||||||||||||||| |       |||||||||||||| |||||||||||||||||||||||| ||||||         
T  6197798 aggggggtgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaa 6197699  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  6197698 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 6197599  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  6197598 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 6197499  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||    
T  6197498 aacatgagatttcttaggattg 6197477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 400 - 715
Target Start/End: Complemental strand, 2301053 - 2300738
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||       ||     
T  2301053 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 2300954  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||| |||||||       ||||| ||||||| |||||    
T  2300953 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaat 2300854  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  2300853 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 2300754  T
Q  700 gagatttcttaggatt 715  Q
    ||||||||||||||||    
T  2300753 gagatttcttaggatt 2300738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 1391514 - 1391830
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||| |||||||||| ||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  1391514 ggtgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 1391613  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||||||||||||||| |||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  1391614 ttgtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 1391713  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  1391714 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 1391813  T
Q  700 gagatttcttaggattg 716  Q
    |||||| ||||||||||    
T  1391814 gagattccttaggattg 1391830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 162; E-Value: 4e-86
Query Start/End: Original strand, 393 - 716
Target Start/End: Original strand, 29076480 - 29076805
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    |||||| |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||| ||||||||||||||||||| ||||||      
T  29076480 taaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaa 29076579  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggt 590  Q
         || ||||||||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||        ||||||| ||    
T  29076580 ataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagt 29076679  T
Q  591 attcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttca 690  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| |||||||    
T  29076680 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttca 29076779  T
Q  691 tgaaaacatgagatttcttaggattg 716  Q
    | |||||||||||||| |||||||||    
T  29076780 taaaaacatgagattttttaggattg 29076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 393 - 716
Target Start/End: Original strand, 29111453 - 29111779
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    |||||| |||||||||||||||||||||||| ||||||||||||        ||||||||||||||||||| ||||||||||||||||||| ||||||      
T  29111453 taaggggggtgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaa 29111552  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn--gtctagtgg 589  Q
         || ||||||||||||||||||||||||||||||||       |||||||||||||||||| | | ||||||||||||         ||||||| |    
T  29111553 ataaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtag 29111652  T
Q  590 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttc 689  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||    
T  29111653 tattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttc 29111752  T
Q  690 atgaaaacatgagatttcttaggattg 716  Q
    || |||||||||||||| |||||||||    
T  29111753 ataaaaacatgagattttttaggattg 29111779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 447 - 716
Target Start/End: Original strand, 28002602 - 28002871
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||| |||||| |||||||||||||||||||| ||||||       || |||| |||||||||||||||| ||||||||||       ||||| ||    
T  28002602 atgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttgtcatttaaaaaaagtcttctg 28002701  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||||||||||||||       |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  28002702 gtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaataaatcagattttgatggatt 28002801  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||    
T  28002802 ttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaagcttcttaggattg 28002871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 31895588 - 31895895
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  31895588 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 31895687  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       ||||||  |||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  31895688 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 31895787  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||| ||||||| || |||||||||||||||||||| ||||    
T  31895788 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaagatga 31895887  T
Q  702 gatttctt 709  Q
    ||||||||    
T  31895888 gatttctt 31895895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 415 - 716
Target Start/End: Original strand, 7051750 - 7052051
Alignment:
Q  415 gattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatc 514  Q
    ||||||||| ||||||||||||       ||||||||||||||||||| ||||||||||||||||||| ||| ||       || ||||| ||| | |||    
T  7051750 gattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtatacgatc 7051849  T
Q  515 aagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 614  Q
    |||||||||||||||||       |||||||||||| ||||||| |||||| |||||||       |||  ||| |||||||||||||||||||||||||    
T  7051850 aagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaatttcgaa 7051949  T
Q  615 gaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 714  Q
    | ||||||||||||||  |||||||||||||||||| | |||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||| ||    
T  7051950 ggattgtttaataaattggattttgatggattttgtaggattttctagtaaaattttagcatgaaaaagtttttcataaaatcatgagatttcttagaat 7052049  T
Q  715 tg 716  Q
    ||    
T  7052050 tg 7052051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 34773301 - 34773608
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||| || ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  34773301 tgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 34773400  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||        ||| ||||||||||||||||    
T  34773401 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaaatca 34773500  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| |||||  |||| ||||||| || |||||||||||||||||||| ||||    
T  34773501 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaagatga 34773600  T
Q  702 gatttctt 709  Q
    ||||||||    
T  34773601 gatttctt 34773608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 393 - 709
Target Start/End: Complemental strand, 14262755 - 14262439
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||| ||||||||||||||||||||| | ||| ||| ||       
T  14262755 taagggggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaa 14262656  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| | | || |||| ||       |||| |||||||    
T  14262655 aaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtat 14262556  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||    
T  14262555 tcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 14262456  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||| ||||||||    
T  14262455 aaaagatgggatttctt 14262439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 539 - 709
Target Start/End: Original strand, 7497105 - 7497274
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| | | || |||||||       |||| |||||||||||||||||||||||||||||| | ||||||||||||  ||||||    
T  7497105 gtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggagtgtttaataaattggatttt 7497204  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7497205 gatggattttgtgg-attttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 7497274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 34759266 - 34759056
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnn-gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    ||||| ||||||||||||| ||||||||||||        ||||||  |||||||||||| ||| || |||||||       |||| |||||||||||||    
T  34759266 ttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaa 34759167  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||| ||||||||||||| |    
T  34759166 tcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaga 34759067  T
Q  699 tgagatttctt 709  Q
    |||||||||||    
T  34759066 tgagatttctt 34759056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 30385272 - 30385075
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||||| | || |||||||       |||| ||||||||||||||    
T  30385272 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaaat 30385173  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| ||||||||||||||          |||||||||||| ||||| ||||| ||||||| ||  | ||||||||||||||||| ||    
T  30385172 cattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagat 30385085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 586 - 709
Target Start/End: Original strand, 31067569 - 31067682
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||||||||||||||||||| ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||    
T  31067569 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 31067658  T
Q  686 tttcatgaaaacatgagatttctt 709  Q
    |||||| |||| ||||||||||||    
T  31067659 tttcataaaaagatgagatttctt 31067682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 501 - 681
Target Start/End: Original strand, 656957 - 657122
Alignment:
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    ||||||||||||||||||||||||| |||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||| |||||    
T  656957 tgtgttattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattctaaatc 657055  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa 681  Q
    |||||||||           ||||||||||| |||| ||||||||||||||| |||   ||||||||||||| ||||||||    
T  657056 attcaaatt-----------tttaataaatctgattctgatggattttgtgggatt---tagtgaaattttatcatgaaaa 657122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 601 - 709
Target Start/End: Complemental strand, 4200541 - 4200443
Alignment:
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| |||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagatg 4200452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 667 - 716
Target Start/End: Original strand, 2238668 - 2238717
Alignment:
Q  667 attttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| |||||    
T  2238668 attttagtatgaaaaaatctttcatgaaaacatgagatttcttaagattg 2238717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 675 - 715
Target Start/End: Complemental strand, 11113773 - 11113733
Alignment:
Q  675 atgaaaaagtctttcatgaaaacatgagatttcttaggatt 715  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  11113773 atgaaaacgtctttcatgaaaacatgagatttcttaggatt 11113733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 30385280 - 30385248
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  30385280 aaaaagtcttgtggtattcaatcaagactcttt 30385248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 34759274 - 34759242
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  34759274 aaaaagtcttgtggtattcaatcaagactcttt 34759242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 481
Target Start/End: Original strand, 656989 - 657020
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||    
T  656989 aaaaagtcttgtggtattcaatcaagactctt 657020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 200; Significance: 1e-109; HSPs: 72)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 400 - 715
Target Start/End: Complemental strand, 43581405 - 43581090
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||| | |||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  43581405 ggtgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43581306  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       ||||||| |||||||||||| ||||||||||||||       |||||||||||||||||||    
T  43581305 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 43581206  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  43581205 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 43581106  T
Q  700 gagatttcttaggatt 715  Q
    ||||||||||||||||    
T  43581105 gagatttcttaggatt 43581090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 973075 - 973392
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngt 498  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||       ||    
T  973075 ggtgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 973174  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        | |||||||||||||||    
T  973175 tttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaa 973274  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  973275 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaaca 973374  T
Q  699 tgagatttcttaggattg 716  Q
    ||||||||||||||||||    
T  973375 tgagatttcttaggattg 973392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 12893295 - 12893616
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| ||||||||||||||||||||||||| |||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||         
T  12893295 aggggggtgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 12893394  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || ||||||||||||||||||||||||||||||||       ||||||||||||| |||||| ||||||||||||||       ||||| ||||||||    
T  12893395 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattc 12893494  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  12893495 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaa 12893594  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||    
T  12893595 aacatgagatttcttaggattg 12893616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 198; E-Value: 1e-107
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 30440683 - 30441004
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||         
T  30440683 aggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaa 30440782  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || ||||||||||||||||||||||||||||||||        ||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  30440783 aagtcttgtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 30440882  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  30440883 aaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaa 30440982  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||    
T  30440983 aacatgagatttcttaggattg 30441004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 44343711 - 44343395
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  44343711 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 44343612  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||| ||||||||||| ||||||||||||||       || |||||||||| |||||    
T  44343611 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaat 44343512  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  44343511 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacat 44343412  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  44343411 gagatttcttaggattg 44343395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 18915050 - 18914734
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||  |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  18915050 ggtgtattggatcatgtatctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaagtc 18914951  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||| |||||||||| |||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  18914950 ttgtgttattcaatcaaaattctttgtcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 18914851  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| |||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  18914850 cattcaaatttcaaaggtttgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 18914751  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  18914750 gagatttcttaggattg 18914734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 47879060 - 47879376
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||||||||||       ||     
T  47879060 ggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtc 47879159  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||||| ||||||||||    
T  47879160 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47879259  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47879260 cattcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47879359  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  47879360 gagatttcttaagattg 47879376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 47914158 - 47914474
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||| ||||||||||||||       ||     
T  47914158 ggtgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtc 47914257  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||||| ||||||||||    
T  47914258 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 47914357  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  47914358 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 47914457  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  47914458 gagatttcttaagattg 47914474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 40996965 - 40996648
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngt 498  Q
    ||||||||||||||||||||||||||||||||||| |        ||||||||| ||||||||||||||||||||||||||||| ||||||       ||    
T  40996965 ggtgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaagt 40996866  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
     | ||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||| |||       ||||||||||||||||||    
T  40996865 ctcgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaa 40996766  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  40996765 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 40996666  T
Q  699 tgagatttcttaggattg 716  Q
    ||||||||||||||||||    
T  40996665 tgagatttcttaggattg 40996648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 180; E-Value: 8e-97
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 34008907 - 34009221
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||   ||||||||||||||||||||||||||||       ||     
T  34008907 ggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaagtc 34009003  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtc-tagtggtattcaaaa 598  Q
    ||||||||||||||||||||| ||||||||||       |||||||||||||||||||| ||||||||||||||       ||| |||||||||||||||    
T  34009004 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaa 34009103  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||| |||||||    
T  34009104 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaaca 34009203  T
Q  699 tgagatttcttaggattg 716  Q
    ||||||||||||||||||    
T  34009204 tgagatttcttaggattg 34009221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 402 - 716
Target Start/End: Complemental strand, 7719574 - 7719259
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa-gactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||| |||  ||||||||||||       ||||||||||| ||||||||||||||||||| |||||||| ||||||       || |    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtct 7719475  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    |||||||||||||||| ||| ||||||||||       |||||||||||||||||||| ||||||||||||||        |||||||||||||||||||    
T  7719474 tgtgttattcaatcaatattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatc 7719375  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7719374 attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 7719275  T
Q  701 agatttcttaggattg 716  Q
    ||||||||||||||||    
T  7719274 agatttcttaggattg 7719259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 401 - 716
Target Start/End: Complemental strand, 20275577 - 20275262
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||||||||||||||||||||||       |||||||| |||||||||||||||||||||||| ||||| ||||||       || |    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 20275478  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    || |||||||||||||||||| |||||||||       ||||| |||||||||||||| ||||||||||||||       ||||  ||||||||||||||    
T  20275477 tgggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatc 20275378  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| ||||    
T  20275377 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatg 20275278  T
Q  701 agatttcttaggattg 716  Q
    ||||||||||| ||||    
T  20275277 agatttcttagcattg 20275262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 450 - 716
Target Start/End: Original strand, 34695215 - 34695481
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||||||| ||||||       || |||||||||||||||||||||| |||||||||       || ||||||||    
T  34695215 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggta 34695314  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||||||||||||||       ||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||    
T  34695315 ttcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttg 34695414  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34695415 tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 34695481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 143; E-Value: 1e-74
Query Start/End: Original strand, 398 - 716
Target Start/End: Complemental strand, 32143237 - 32142916
Alignment:
Q  398 gaggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn 496  Q
    |||||||||||||||||||||||||||||||||||||||        ||||||||||||||||||| |||||||||||||||||||  |||||           
T  32143237 gaggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaa 32143138  T
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn--gtctagtggtattc 594  Q
    || |||||||||||||| ||  || ||||||||||       ||||| ||||||| |||||| ||||||||||||||         |||  |||||||||    
T  32143137 gtcttgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattc 32143038  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| ||    
T  32143037 aaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaa 32142938  T
Q  695 aacatgagatttcttaggattg 716  Q
    |||||||||||||||| |||||    
T  32142937 aacatgagatttcttaagattg 32142916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 539 - 716
Target Start/End: Complemental strand, 7718538 - 7718361
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  7718538 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagatttt 7718439  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7718438 gatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttcttaggattg 7718361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 29615077 - 29614770
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| ||||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  29615077 tgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29614978  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||| ||||||||||||    
T  29614977 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaaatca 29614878  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  29614877 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 29614778  T
Q  702 gatttctt 709  Q
    ||||||||    
T  29614777 gatttctt 29614770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 401 - 697
Target Start/End: Original strand, 727405 - 727692
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    |||||||||||||||||||||| |||||||||| ||       ||||||||||||||||| ||||||||||||||||||||||||||||       || |    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtct 727504  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcactt-nnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||||||||| ||||||||||||||       |||||||| |||||||||||||||||| |||||||         |||||| |||||||||||    
T  727505 tgtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaat 727604  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||| ||| ||||||||||||||||          |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  727605 cattcaaatttcaaaggattgtttaataaatca----------gattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 727692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 393 - 709
Target Start/End: Original strand, 28342225 - 28342541
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||| | ||| ||||||       
T  28342225 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaa 28342324  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||| | ||| || |||| ||       |||| |||||||    
T  28342325 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtat 28342424  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||||    
T  28342425 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 28342524  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  28342525 aaaagatgagatttctt 28342541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 400 - 648
Target Start/End: Original strand, 31638767 - 31639015
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| |||||||||||||| ||||||||||||       |||||||||||||| |||||||||||||||||||||||||||||||       ||     
T  31638767 ggtgtattgaatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagtc 31638866  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||| ||||||||||||||        |  |||||||||| ||||| ||||||||||||||       |||||||||||||||||||    
T  31638867 ttgtgttattcaatcaaaattctttgtcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 31638966  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31638967 cattcaaatttcgaaggattgtttaataaatcagattttgatggatttt 31639015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 539 - 716
Target Start/End: Complemental strand, 39219552 - 39219376
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||| ||||||||||| ||||||||||||||       ||||| |||||||||||||||||||||||| || || |||||||||||||||||||||    
T  39219552 gtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattcaaaatcattcaaattttgatga-ttgtttaataaatcagatttt 39219454  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  39219453 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttcttaggattg 39219376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 23101185 - 23101492
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    ||||| |||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||| | ||| ||||||       || ||    
T  23101185 tgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaagtctt 23101284  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  23101285 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 23101384  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  23101385 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 23101484  T
Q  702 gatttctt 709  Q
    ||||||||    
T  23101485 gatttctt 23101492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 410 - 716
Target Start/End: Original strand, 7113358 - 7113660
Alignment:
Q  410 atcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttat 508  Q
    |||||||||||||||||||||||||||        ||||||| ||||| || |||||||||||||||||||||| ||||||       || |||||||||    
T  7113358 atcatgattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttat 7113456  T
Q  509 tcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaat 608  Q
    ||||| |||||| ||| ||||||       || ||||||||||||||    ||| ||||||||||       ||| ||||||||||||||| ||||||||    
T  7113457 tcaattaagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaat 7113552  T
Q  609 ttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 708  Q
    |||| || ||||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||| ||||||    
T  7113553 ttcgcaggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttct 7113652  T
Q  709 taggattg 716  Q
    ||||||||    
T  7113653 taggattg 7113660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 392 - 716
Target Start/End: Original strand, 10068343 - 10068668
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | |||||||||  |||||||| | |||||||||||||       || |||||||||||||||| ||||||||||| ||||||| ||||||      
T  10068343 ttaagggggatgtattggaatatgattctgatggattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaa 10068442  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtctt-gtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggt 590  Q
         || ||||| |||| |||||||| |||||| |||||       ||||| | ||||||||||||| | | || |||||||       |||| |||||    
T  10068443 aaaaagtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggt 10068542  T
Q  591 attcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttca 690  Q
    |||||||||||||||||||| |||| |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  10068543 attcaaaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttca 10068642  T
Q  691 tgaaaacatgagatttcttaggattg 716  Q
    | |||||||||||||| |||||||||    
T  10068643 taaaaacatgagatttgttaggattg 10068668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 39783986 - 39784293
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    ||||||||||   ||||||| ||||||||||||||       || ||||||||||| |||||||||||||||||||| ||| ||||||       || ||    
T  39783986 tgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 39784085  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  39784086 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 39784185  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    || ||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  39784186 tttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 39784285  T
Q  702 gatttctt 709  Q
    ||||||||    
T  39784286 gatttctt 39784293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 9882549 - 9882243
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||||||  |||||||||||||       || ||||||||||||| |||||||||||||||||| ||| ||||||       |||||    
T  9882549 tgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtttt 9882450  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  9882449 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 9882350  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||  ||||||||||||||  |||||||||||||||||||| ||||| ||||| |||||||  | ||||||||||||||| |||| ||||    
T  9882349 ttcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-aaaaaatga 9882251  T
Q  702 gatttctt 709  Q
    ||||||||    
T  9882250 gatttctt 9882243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 7993029 - 7993336
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||||||  |||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || |     
T  7993029 tgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctc 7993128  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| |||||| |||||       |||||| ||||||||||||||||| || |||||||       ||||  |||||||||||||||    
T  7993129 gtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaaatca 7993228  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||   ||||||||||||| ||||| ||||| ||||| ||||||| || |||||||||||||||||||| || |    
T  7993229 ttcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataa 7993328  T
Q  702 gatttctt 709  Q
    ||||||||    
T  7993329 gatttctt 7993336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 393 - 709
Target Start/End: Original strand, 18838267 - 18838583
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| |||||| |||||||       || ||||||| |||||||||||||||||||||||| ||| ||| ||       
T  18838267 taagggggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaa 18838366  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
         | ||||| ||||||||||||| ||||||| ||||       |||||| ||||||||||||| ||| || ||| |||       |||| |||||||    
T  18838367 aaaaatattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtat 18838466  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||| |||||||    
T  18838467 tcaaaatcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatg 18838566  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  18838567 aaaagatgagatttctt 18838583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 449 - 688
Target Start/End: Original strand, 12963635 - 12963874
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggt 548  Q
    ||||||||||||||||| |||||||||||||||| ||| ||       || ||||| ||||||||||||| ||||||||||||       |||||| | |    
T  12963635 gaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagat 12963734  T
Q  549 attcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||| | | || || ||||       |||| ||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12963735 attcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggatttt 12963834  T
Q  649 gtggaattttctagtgaaattttagcatgaaaaagtcttt 688  Q
    |||| |||||||||||||||||||| | ||||||||||||    
T  12963835 gtgggattttctagtgaaattttagtaagaaaaagtcttt 12963874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 447 - 706
Target Start/End: Original strand, 33382569 - 33382828
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||||||||| |||||||||||||||||| ||| ||| ||       |  ||||| ||||||||||||| ||||||||||||       |||||| |    
T  33382569 atgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagccttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 33382668  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||||||       ||||  ||||||||||||||||| ||||||||||| ||||||||||||||  ||||||||||||||    
T  33382669 gtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaatcatttaaatttcgaaggattgtttaataaattggattttgatggatt 33382768  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
    |||||| ||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||    
T  33382769 ttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagatgagattt 33382828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 3022813 - 3023120
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    ||||||| || | ||||||| ||||||||||||||       || |||||||||| || ||||||| |||||||||| |||  || ||       || ||    
T  3022813 tgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaagtctt 3022912  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| | ||||||||||       |||||| ||||||||||||| | | || |||||||       |||| ||||||||||||||||    
T  3022913 gtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatca 3023012  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  3023013 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagatga 3023112  T
Q  702 gatttctt 709  Q
    ||||||||    
T  3023113 gatttctt 3023120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 585 - 686
Target Start/End: Original strand, 43679491 - 43679592
Alignment:
Q  585 agtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagt 684  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  43679491 agtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt 43679590  T
Q  685 ct 686  Q
    ||    
T  43679591 ct 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 415 - 715
Target Start/End: Original strand, 19251439 - 19251729
Alignment:
Q  415 gattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatc 514  Q
    ||||||||| ||||||||||||       || | ||||||||||||| |||||||||||||||||||| ||| ||       || ||||| |||||||||    
T  19251439 gattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggtattcaatc 19251538  T
Q  515 aagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaa 614  Q
    |||| ||||||||||||       |||||| ||||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||    
T  19251539 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaa 19251638  T
Q  615 gaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggat 714  Q
    | ||||||||||||||  |||||||||||          ||||||| ||||||||||||||  |||||||||||||||||||| ||| ||||||| ||||    
T  19251639 ggattgtttaataaattggattttgatgg----------attttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggat 19251728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 393 - 716
Target Start/End: Complemental strand, 3797379 - 3797066
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||| ||| |||||||||| | |||||||||||       || |||||| ||| ||| ||||||||||||||||||||| ||||||       
T  3797379 taagggggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaa 3797280  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        ||  | || ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||    
T  3797279 aaaagtcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtat 3797180  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    |||| |||||| |||||| |||| |||||||||||||| |||||||||         ||| ||||||||||||||||||||||||||||||||||| | |    
T  3797179 tcaagatcattaaaattttgaaggattgtttaataaattagattttga---------tgggattttctagtgaaattttagcatgaaaaagtcttttaag 3797089  T
Q  693 aaaacatgagatttcttaggattg 716  Q
    ||||||| ||||||||||||||||    
T  3797088 aaaacat-agatttcttaggattg 3797066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 28035020 - 28034811
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| | ||||||||||       |||||| | ||||||||||| ||| || |||||||       |||| ||||||||||||||    
T  28035020 ttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 28034921  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||    
T  28034920 tattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagat 28034821  T
Q  700 gagatttctt 709  Q
    ||||||||||    
T  28034820 gagatttctt 28034811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 506 - 716
Target Start/End: Original strand, 9179871 - 9180071
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||||||||||||||||       || |||| |||||||||||| |||||| |||||||       |||| ||||||| |||||||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||| ||||| ||||||||||||||          |||||||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  9179971 aattccgaaggattgtttaataaat----------tggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatt 9180060  T
Q  706 tcttaggattg 716  Q
    |||||||||||    
T  9180061 tcttaggattg 9180071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 587 - 716
Target Start/End: Complemental strand, 43187485 - 43187356
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  |||||||||| ||||||| | ||||||||||||||||||| || ||||||||||    
T  43187485 tggtattcaaaatcattcaaattttgaagcattgtttaataaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtct 43187386  T
Q  687 ttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||| ||||||||||| || ||||||    
T  43187385 ttcatgaagacatgagattttttgggattg 43187356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 508 - 709
Target Start/End: Original strand, 8675326 - 8675527
Alignment:
Q  508 ttcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 607  Q
    ||||||||| | ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  608 tttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 707  Q
     ||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||| ||||| ||||||| ||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  708 tt 709  Q
    ||    
T  8675526 tt 8675527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 500 - 716
Target Start/End: Original strand, 12740358 - 12740573
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||||||||||||||||       |||||| |||||| |||||| | | || |||| ||       |||| ||||||||||||||    
T  12740358 ttgtggtattcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaat 12740457  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||| ||||||||||||||  ||||||||| |||||||||| ||||| ||||| ||||||| || || |||||||||||| |||| ||    
T  12740458 cattcaaatttcaaaggattgtttaataaatg-gattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagat 12740556  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  12740557 gagatttcttaagattg 12740573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 400 - 569
Target Start/End: Original strand, 8078287 - 8078457
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||| ||||||         |    
T  8078287 ggtgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaaaat 8078386  T
Q  500 ttgtgttattcaatcaagattctttgtcattt-nnnnnnngtcttgtggtattcaatcaaaactcttaatc 569  Q
    ||||||||||||||||||||||||||||||||         ||||||||||||||||||| ||||||||||    
T  8078387 ttgtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagactcttaatc 8078457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 447 - 650
Target Start/End: Original strand, 37327859 - 37328062
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||||| ||||||||||||       |||||| |    
T  37327859 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 37327958  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || || ||||       |||| |||||||||||||||||||||||||| ||| ||||||||||||||   |||||||||||||    
T  37327959 gtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattgaattttgatggatt 37328058  T
Q  647 ttgt 650  Q
    ||||    
T  37328059 ttgt 37328062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 40460975 - 40460723
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||| |||||||||| |||||||||| ||| ||||||       || ||||| |||||||| |||| ||||||||||||       |||||| |    
T  40460975 atgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaagactctttgtcattttaaaaaagtcttgag 40460876  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
     ||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  40460875 atattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 40460776  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||          ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  40460775 ttg----------tagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttctt 40460723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 499 - 706
Target Start/End: Complemental strand, 44122116 - 44121919
Alignment:
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    |||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||        ||| |||||||||||||    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||| ||||||| |    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttaatgaaaaga 44121927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 539 - 672
Target Start/End: Complemental strand, 10676596 - 10676463
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||| || |||||||       ||||  | ||||||||||||||||||||||||||| ||||||||||||||  |||||     
T  10676596 gtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttg 10676497  T
Q  639 gatggattttgtggaattttctagtgaaatttta 672  Q
    |||||||||| ||||||||||| |||||||||||    
T  10676496 gatggattttatggaattttcttgtgaaatttta 10676463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 590 - 709
Target Start/End: Original strand, 19810874 - 19810983
Alignment:
Q  590 tattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttc 689  Q
    |||||||||||||||||||||| ||  ||||||||||||||          |||||||||||||||||||||||||||||||||||| |||| |||||||    
T  19810874 tattcaaaatcattcaaatttcaaatgattgtttaataaat----------tggattttgtggaattttctagtgaaattttagcataaaaatgtctttc 19810963  T
Q  690 atgaaaacatgagatttctt 709  Q
    ||||||||||||||||||||    
T  19810964 atgaaaacatgagatttctt 19810983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 402 - 681
Target Start/End: Original strand, 32883668 - 32883948
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatc-aagactcttttcaatttnnnnnnngttt 500  Q
    |||||||||| ||||||||| ||||||||||||||       || |||||||||| ||||| ||||||||| |||||| ||| ||| ||       || |    
T  32883668 tgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaaaaaaagtct 32883767  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    | || ||||||||||||| | ||||||||||       ||||||  ||||||||| || ||| || |||||||       |||| |||||||||||||||    
T  32883768 tatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 32883867  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa 681  Q
    ||||||||||||||  |||||||| |||||  ||||||||||||||| |||| ||||| ||||| ||||||| || |||||    
T  32883868 attcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 404 - 652
Target Start/End: Complemental strand, 46405742 - 46405494
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| | ||||||| || |||||||||||       || ||||||||||| |||||||||||||||||||| ||| ||| ||        | |||     
T  46405742 tattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgc 46405643  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    | ||||||||||||| |||||||| |||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||    
T  46405642 ggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatt 46405543  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtgg 652  Q
    |||||||| ||  ||||||||||||||  ||||||||||||||||||||    
T  46405542 caaatttcaaatgattgtttaataaattggattttgatggattttgtgg 46405494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 392 - 639
Target Start/End: Complemental strand, 17001346 - 17001099
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | |||||||||| | ||||||| | |||||||||| |       || |||||||||||||||||||||||||||||||| ||| ||| ||      
T  17001346 ttaagggggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaa 17001247  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggta 591  Q
         || ||||| ||||||||||||| ||||||||||||       |||||| |||||||||| || ||| || |||||||        | | ||||||    
T  17001246 aaaaagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggta 17001147  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||||    
T  17001146 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 17001099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 586 - 685
Target Start/End: Original strand, 25805763 - 25805862
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    ||||||||||||||||||||||||||| || ||||||||||||||   ||| ||||||||||||||| |||||||| | |||||||||||||||||||||    
T  25805763 gtggtattcaaaatcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgtgggattttctaataaaattttagcatgaaaaagtc 25805862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 497 - 650
Target Start/End: Original strand, 29585497 - 29585649
Alignment:
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaa 596  Q
    |||||||| ||||||||||||||||||||||||||       |||||| ||||||||||||||||| ||| ||||||       ||||  ||||||||||    
T  29585497 gttttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttta-tcacttaaaaaaagtcttctggtattcaa 29585595  T
Q  597 aatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||||| |||| |||||||||||| |  ||||||||||||||||||    
T  29585596 aatcattcaaattttgaaggattgtttaataatttggattttgatggattttgt 29585649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 500 - 709
Target Start/End: Original strand, 509641 - 509840
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| | ||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||    
T  509641 ttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 509740  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||  ||||||||||||||  |||||||||||||||||          |||||  |||||| || |||||||||||||||||||| ||    
T  509741 cattcaaatttcgaacgattgtttaataaattggattttgatggattttg----------tagtgggattttaacaagaaaaagtctttcatgaaaagat 509830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 601 - 709
Target Start/End: Complemental strand, 37972981 - 37972873
Alignment:
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||| ||| ||||||||||  ||||||||||||||||| || ||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttgatggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatg 37972882  T
Q  701 agatttctt 709  Q
    ||| |||||    
T  37972881 agacttctt 37972873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 447 - 650
Target Start/End: Original strand, 39028029 - 39028232
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||||| ||||||||||||       |||||| |    
T  39028029 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 39028128  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
     ||||||||||| ||| || |||||||       |||| ||| ||||||||||| |||||||| ||||  ||||||||||||||  ||||||||||||||    
T  39028129 atattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaaaatcgttcaaattacgaaagattgtttaataaattggattttgatggatt 39028228  T
Q  647 ttgt 650  Q
    ||||    
T  39028229 ttgt 39028232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 400 - 524
Target Start/End: Original strand, 34695123 - 34695247
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| |||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||| ||||||       ||     
T  34695123 ggtgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 34695222  T
Q  500 ttgtgttattcaatcaagattcttt 524  Q
    ||||| ||||||||||||| |||||    
T  34695223 ttgtggtattcaatcaagactcttt 34695247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 706
Target Start/End: Complemental strand, 44623492 - 44623295
Alignment:
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    |||||| ||||||||||||| ||||||||||||       ||||||||||||| |||||| |||||| |||||||       |||| ||| |||||||||    
T  44623492 tttgtgatattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaa 44623393  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||| ||||| ||  | ||||||||||||          || |||||||||||||||||||||||||||||| |||||||||||| |||| |||| |    
T  44623392 tcattcatatttctaaagactgtttaataaat----------tgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaata 44623303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 39219650 - 39219561
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    ||||||||||||||| ||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||    
T  39219650 ggtgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 39219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 601 - 709
Target Start/End: Original strand, 41827390 - 41827498
Alignment:
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||| || |||| ||||||||||||||  |||||||||||||||||||| ||| | ||||| ||||||| || ||||| |||||||||||||| |||    
T  41827390 attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatatg 41827489  T
Q  701 agatttctt 709  Q
    |||||||||    
T  41827490 agatttctt 41827498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 586 - 706
Target Start/End: Complemental strand, 44256895 - 44256775
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  ||||| |||| ||||||| | |||||  |||| ||||||| || ||||||||     
T  44256895 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtt 44256796  T
Q  686 tttcatgaaaacatgagattt 706  Q
    |||||| |||| |||||||||    
T  44256795 tttcatcaaaatatgagattt 44256775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 402 - 489
Target Start/End: Original strand, 43679363 - 43679451
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    |||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 586 - 697
Target Start/End: Complemental strand, 1470362 - 1470252
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    ||||||||||||||| |||||||||  ||| |||||||||| ||| |||||||||| | |||||||| |||||||  | |||||||||||||||||| ||    
T  1470362 gtggtattcaaaatcgttcaaattttaaagcattgtttaatgaattagattttgatag-ttttgtgggattttctgataaaattttagcatgaaaaaatc 1470264  T
Q  686 tttcatgaaaac 697  Q
    |||  |||||||    
T  1470263 ttttttgaaaac 1470252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 506 - 706
Target Start/End: Complemental strand, 33892459 - 33892269
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||| | ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||||||    
T  33892459 tattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattcaaaatcattca 33892360  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||||||  |||||| |||||||          ||||||||   ||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||    
T  33892359 aatttcgaatgattgttaaataaat----------tggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagatt 33892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 402 - 558
Target Start/End: Complemental strand, 48117906 - 48117750
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| |  |||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  48117906 tgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 48117807  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaa 558  Q
    ||| ||||||||||||| ||||||||||||       |||||| |||||||||||||    
T  48117806 gtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaa 48117750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 621 - 699
Target Start/End: Original strand, 10617024 - 10617102
Alignment:
Q  621 tttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||| ||||||||||||||||||||  |||||||||||| ||||||| |  || ||||||||||| |||||||    
T  10617024 tttaataaattagattttgatggattttgtgagattttctagtgatattttagtaataacaagtctttcataaaaacat 10617102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 581 - 639
Target Start/End: Original strand, 47066770 - 47066828
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  47066770 gtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 47066828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 392 - 478
Target Start/End: Original strand, 21067759 - 21067845
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    ||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||||||    
T  21067759 ttaagggggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagact 21067845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 29893001 - 29893090
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||| | |||||| ||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  29893001 taagggggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 29893090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Complemental strand, 43187665 - 43187576
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||| | |||||||||||   |||||||| ||||||||||||       || |||||| |||||||||||||||||||||||||||||    
T  43187665 taagggggatgtattggatcgaaattctaagagattttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactcttt 43187576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 586 - 645
Target Start/End: Original strand, 447854 - 447913
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggat 645  Q
    |||||||| ||||||||||||||||||||  |||||||||| |||  |||||||||||||    
T  447854 gtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttgatggat 447913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 478
Target Start/End: Original strand, 509585 - 509661
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    |||||||||| | |||| || ||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  509585 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 509661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 10676676 - 10676604
Alignment:
Q  417 ttctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    ||||||||||||||||||||       || |||||||| |||||||||||| |||||||||||||| ||||||    
T  10676676 ttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaattt 10676604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 397 - 531
Target Start/End: Original strand, 41827196 - 41827330
Alignment:
Q  397 ggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn 496  Q
    |||| |||||||||| |  ||| || ||||||||||||||       || |||||||||||||||||||||||||||||| | ||| ||| ||           
T  41827196 ggagatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaa 41827295  T
Q  497 gttttgtgttattcaatcaagattctttgtcattt 531  Q
    || ||||| ||||||||||||| | ||||||||||    
T  41827296 gtcttgtggtattcaatcaagactttttgtcattt 41827330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 481
Target Start/End: Complemental strand, 7718543 - 7718512
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||    
T  7718543 aaaaagtcttgtggtattcaatcaagactctt 7718512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 482
Target Start/End: Original strand, 29585446 - 29585524
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||| || ||||||||| | ||||||||||||       || |||||||||| ||||||||||||||||||| |||||    
T  29585446 tattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattcttt 29585524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 48)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 392 - 716
Target Start/End: Complemental strand, 42735600 - 42735276
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||      
T  42735600 ttaaggggggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaa 42735501  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggta 591  Q
         || ||||||||||||||||||||||||| ||||||       | ||||||||||||||| || ||||||||||||||       |||||||||||    
T  42735500 aaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggta 42735401  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 691  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  42735400 ttcaaaatcattcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcat 42735301  T
Q  692 gaaaacatgagatttcttaggattg 716  Q
     ||||||||||||||||||||||||    
T  42735300 aaaaacatgagatttcttaggattg 42735276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 402 - 716
Target Start/End: Complemental strand, 26374741 - 26374429
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||| ||||||       |||      
T  26374741 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtt-- 26374644  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||    
T  26374643 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 26374544  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  26374543 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 26374444  T
Q  702 gatttcttaggattg 716  Q
    |||||||||||||||    
T  26374443 gatttcttaggattg 26374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 2705134 - 2704818
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||| ||| |||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||| ||       ||     
T  2705134 ggtgtattggatcatgattgtaaaggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaaagtc 2705035  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  2705034 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 2704935  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||  |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    
T  2704934 cattcaaatttcgaatgattgtttaataaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacat 2704835  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  2704834 gagatttcttaggattg 2704818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 7507214 - 7506898
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||         |    
T  7507214 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagt 7507115  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||| |||||| |||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||     
T  7507114 ttgtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaac 7507015  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  7507014 cattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacat 7506915  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  7506914 gagatttcttaggattg 7506898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 23115483 - 23115168
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  23115483 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 23115384  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||||| |    
T  23115383 ttgtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa-t 23115285  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||    
T  23115284 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacat 23115185  T
Q  700 gagatttcttaggattg 716  Q
    |||||| ||||||||||    
T  23115184 gagattccttaggattg 23115168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 404 - 716
Target Start/End: Complemental strand, 42938428 - 42938116
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| || ||| |||||||||||||||||       | ||||||||||||||||||||||||||||||||||||||||||||       || ||||    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgt 42938329  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    ||||||||||||||||| ||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||||||    
T  42938328 gttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 42938229  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T
Q  704 tttcttaggattg 716  Q
    |||||||||||||    
T  42938128 tttcttaggattg 42938116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 5576936 - 5576619
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||| ||||||||||||||||||||||||        |||||||| ||||||||||||||||||||||||||||| ||||||       ||     
T  5576936 ggtgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 5576837  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaa 598  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        ||| ||||||||||||||    
T  5576836 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaa 5576737  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||    
T  5576736 tcattcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaaca 5576637  T
Q  699 tgagatttcttaggattg 716  Q
    ||||||||||||||||||    
T  5576636 tgagatttcttaggattg 5576619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 104 - 284
Target Start/End: Original strand, 8756151 - 8756331
Alignment:
Q  104 ttttagcatttgaccggcttttccttttcctttggcggtgcggctgacggagcagcgttggaggagttggtgcggtgaagatgacggtggttttagcttt 203  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8756151 ttttaggatttgaccggcttttccttttcctttggcggtgcggctgacggagcagcgttggaggagttggtgcggtgaagatgacggtggttttagcttt 8756250  T
Q  204 gtcagacgaagcatgcttgaattctgagaaatgaaatgaaatgcgatactggttgcggaggtgagtaatgatgagtaatgg 284  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  8756251 gtcagacgaagcatgcttgaattctgagaaatgaaatgaaatgcgatactggttgcggaggtgagtgatgatgagtaatgg 8756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 401 - 716
Target Start/End: Original strand, 41478989 - 41479294
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 41479088  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    |||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||| ||||||||||||||    
T  41479089 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatc 41479188  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||  ||||||||||||||||          |||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  41479189 attcaaatttcgaatgattgtttaataaatca----------gattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatg 41479278  T
Q  701 agatttcttaggattg 716  Q
    ||||||||||||||||    
T  41479279 agatttcttaggattg 41479294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 500 - 716
Target Start/End: Complemental strand, 24502028 - 24501812
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||| ||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  24502028 ttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 24501929  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  24501928 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 24501829  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  24501828 gagatttcttaggattg 24501812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 42937251 - 42937558
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||| |||||||||||||||||       |||||||||||||||||||||||||||||||          |||||       ||     
T  42937251 ggtgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaacca-------aatttaaaaaaagtc 42937343  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||| ||||||||||       |||||||||||||||||| |  |||||||||||||       |||||||||||||||||||    
T  42937344 ttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatcga--ctcttaatcacttaaaaaaagtctagtggtattcaaaat 42937441  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||    
T  42937442 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacat 42937541  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  42937542 gagatttcttatgattg 42937558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 503 - 715
Target Start/End: Complemental strand, 10392449 - 10392237
Alignment:
Q  503 tgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcat 602  Q
    |||||||||||||||||||||||||||||        ||||||| ||||||||||| ||| ||||||||||       ||||||||||||||| ||||||    
T  10392449 tgttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcagaatcat 10392350  T
Q  603 tcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgag 702  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  10392349 tcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgag 10392250  T
Q  703 atttcttaggatt 715  Q
    |||| ||||||||    
T  10392249 atttattaggatt 10392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 400 - 704
Target Start/End: Complemental strand, 32711597 - 32711305
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||| || |||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||       ||     
T  32711597 ggtgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 32711498  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  32711497 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 32711398  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||| ||||||||||| |||||||||||||||||||          |||||||||   |||| ||||||||||||||||||||||||||||||||||||     
T  32711397 catttaaatttcgaaggattgtttaataaatcagat----------tttgtggaa--atctattgaaattttagcatgaaaaagtctttcatgaaaacaa 32711310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 401 - 716
Target Start/End: Original strand, 43959549 - 43959854
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||| |||||||||| ||| |||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 43959648  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       ||||||| |||||||||||| | ||||||||||||       | |||||||||||||||||    
T  43959649 ttgtgttattcaatcaagattctttgtcattttaaaaaagtcttgt-gtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaat 43959747  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||| || |||||||    
T  43959748 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtg----------gtgaaattttagcatgaaaaagtctttaattaaaacat 43959837  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  43959838 gagatttcttatgattg 43959854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 14782448 - 14782141
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  14782448 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 14782349  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  14782348 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 14782249  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  14782248 ttcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 14782149  T
Q  702 gatttctt 709  Q
    ||||||||    
T  14782148 gatttctt 14782141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 44726123 - 44725816
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  44726123 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 44726024  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  44726023 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 44725924  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  44725923 ttcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 44725824  T
Q  702 gatttctt 709  Q
    ||||||||    
T  44725823 gatttctt 44725816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 393 - 709
Target Start/End: Complemental strand, 19718203 - 19717887
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||||| |||||||||| | ||||||| ||||||||||||||       || ||||||||||| || ||||||||||||||||| ||| ||||||       
T  19718203 taagggagatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaa 19718104  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| |||||||    
T  19718103 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtat 19718004  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||| ||||| ||||| ||||||| || |||||||||||| |||    
T  19718003 tcaaaatcattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatg 19717904  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  19717903 aaaagatgagatttctt 19717887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 395 - 709
Target Start/End: Complemental strand, 10295701 - 10295386
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||||| |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||         
T  10295701 agggagatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaagaa 10295602  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || || ||  |||||||||||| |||| |||| ||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||||    
T  10295601 aagtcttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattc 10295502  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatgga-ttttgtggaattttctagtgaaattttagcatgaaaaagtctttcatga 693  Q
    ||||||||||||||||||||| ||||||||||||||  |||||||||||| |||||||| ||||| ||||| ||||||| || |||||||||||||||||    
T  10295501 aaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 10295402  T
Q  694 aaacatgagatttctt 709  Q
    ||| ||||||||||||    
T  10295401 aaagatgagatttctt 10295386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 392 - 706
Target Start/End: Complemental strand, 18959050 - 18958736
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||| |||||||||||||||| ||| ||||||      
T  18959050 ttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaa 18958951  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggta 591  Q
         || ||||| ||||||||||||| ||||| ||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||    
T  18958950 aaaaagtcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggta 18958851  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 691  Q
    |||||||||||||||||||||||| ||||||||||||||  |||||| ||||||||||||| ||||| ||||| ||||||| || |||||||||||||||    
T  18958850 ttcaaaatcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat 18958751  T
Q  692 gaaaacatgagattt 706  Q
    ||||| || ||||||    
T  18958750 gaaaagattagattt 18958736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 393 - 709
Target Start/End: Complemental strand, 9288772 - 9288463
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| ||||||||| | ||||||||||||       || ||||||||||||||||||       ||||||| ||| ||||||       
T  9288772 taagggggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt-------caagactttttgcaatttaaa 9288680  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||||| | || |||||||       |||| |||||||    
T  9288679 aaaagtcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtat 9288580  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||||| ||||||||| ||||| ||||| ||||||| || ||||||||||||||||    
T  9288579 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatg 9288480  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  9288479 aaaagatgagatttctt 9288463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 404 - 706
Target Start/End: Complemental strand, 39467778 - 39467477
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||||    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgt 39467680  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    | ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||||    
T  39467679 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatt 39467580  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| ||||||||||||||   ||||||||||||||| ||| ||||| ||||| ||||||| || |||||| ||||||||||||| ||||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  704 ttt 706  Q
    |||    
T  39467479 ttt 39467477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 7466228 - 7466525
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  7466228 tgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 7466327  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || ||| |||       |||| ||||||||||||||||    
T  7466328 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaaatca 7466427  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||||||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  7466428 ttcaaattttgaagaattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 7466517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 26856004 - 26856267
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtctt-gt 545  Q
    |||||||||| ||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||||| ||||||||||||       ||||| |     
T  26856004 atgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatattgtggtattcaatcaagactctttgtcattttaaaaaagtctttga 26856103  T
Q  546 ggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggat 645  Q
    ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  26856104 ggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaagtattgtttaataaattggattttgatggat 26856203  T
Q  646 tttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||||||| ||||| ||||| ||||||| || ||||||||||||||  |||| || |||||||||    
T  26856204 tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaaaataagatttctt 26856267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 586 - 716
Target Start/End: Original strand, 4403184 - 4403314
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||||||||||||||||||| ||||||||||||||  | |||||||||||||||||| ||||| ||||| ||||||| || |||||||||    
T  4403184 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtc 4403283  T
Q  686 tttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||| |||||||||||| ||||||    
T  4403284 tttcatgaaaatatgagatttcttgggattg 4403314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 539 - 709
Target Start/End: Complemental strand, 43166866 - 43166696
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||  ||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||    
T  43166866 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggatttt 43166767  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||||||| ||||| | ||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  43166766 gatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaagatgagatttctt 43166696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 18306229 - 18305977
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||||| ||||||||||||       |||||| |    
T  18306229 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgag 18306130  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||| ||       |||| |||||||||||||||||||||||||||||  ||||||||||||||          ||||||    
T  18306129 gtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaagattgtttaataaat----------tggatt 18306040  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18306039 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 18305977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 588 - 710
Target Start/End: Complemental strand, 4950143 - 4950021
Alignment:
Q  588 ggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctt 687  Q
    ||||||||||||||||||| |||| ||  ||| |||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||    
T  4950143 ggtattcaaaatcattcaagtttcaaaagattatttaataaattagattttgatggaatttgtggaattttctagtgaaattttagcatgaaaaaatatt 4950044  T
Q  688 tcatgaaaacatgagatttctta 710  Q
    ||||| |||||| ||||||||||    
T  4950043 tcatgcaaacataagatttctta 4950021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 498 - 716
Target Start/End: Complemental strand, 39190030 - 39189815
Alignment:
Q  498 ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    ||||||| ||||||||||||| ||||||  ||||       ||||||||||||||||| ||||||||| |||| ||       ||||  || |||||||     
T  39190030 ttttgtggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaac 39189932  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||| ||||||||||||||  || ||||||||||||||  |||||||||||| |||||||| || |||||| ||||||||||||||    
T  39189931 atcattcaaatttcgaaggattgtttaataaatt-gaatttgatggattttgatgaattttctagt-aaattttaacaagaaaaaatctttcatgaaaac 39189834  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||| ||||||    
T  39189833 atgagatttcttgggattg 39189815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 393 - 639
Target Start/End: Complemental strand, 4031580 - 4031334
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||| ||||||||| ||| ||||||       
T  4031580 taagggggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaa 4031481  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || || | ||       |||| |||||||    
T  4031480 aaaagtcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtat 4031381  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    ||||||||||||||||||||||| ||||||||||||||  |||||||    
T  4031380 tcaaaatcattcaaatttcgaaggattgtttaataaattggattttg 4031334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 450 - 709
Target Start/End: Original strand, 32497466 - 32497715
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||| ||||    
T  32497466 aaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggta 32497565  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||          |||||||||    
T  32497566 ttcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttg 32497655  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    ||| ||||| ||||| ||||||| || || ||||||||||||||||| ||||||||||||    
T  32497656 tgggattttgtagtgtaattttaacaagagaaagtctttcatgaaaagatgagatttctt 32497715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 402 - 650
Target Start/End: Original strand, 16362089 - 16362337
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||| ||| | ||||||| ||||||||||||||       || |||||||||| ||||||||||||||||||||| |||  || ||        | ||    
T  16362089 tgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaaatctt 16362188  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || || ||||       |||| ||||||||||||||||    
T  16362189 gtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaaatca 16362288  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||    
T  16362289 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgt 16362337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 393 - 709
Target Start/End: Complemental strand, 42306107 - 42305801
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | |||||||||| | ||||||| | ||||||||||||       || |||||||||||||||| ||||||||||||| | ||| ||||||       
T  42306107 taagggggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaa 42306008  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||        ||| |||||||    
T  42306007 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtat 42305908  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||| ||||||||||||||| |||||||||| |||  |||||| ||||||||||          ||||| ||||||| || ||||||||| ||||||    
T  42305907 tcaaaataattcaaatttcgaaggattgtttaatcaattggattttaatggattttg----------tagtgtaattttaacaagaaaaagtcattcatg 42305818  T
Q  693 aaaacatgagatttctt 709  Q
    |||| ||||||||||||    
T  42305817 aaaaaatgagatttctt 42305801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 402 - 639
Target Start/End: Original strand, 31623588 - 31623825
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| || |||||||||||       || ||||||||||||||||| |||||||||||||| |||  || ||       || |     
T  31623588 tgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaagtctc 31623687  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
     || ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  31623688 ttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 31623787  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||||||||||||| ||||||||||||||  |||||||    
T  31623788 ttcaaatttcgaaggattgtttaataaattggattttg 31623825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 400 - 489
Target Start/End: Complemental strand, 24214906 - 24214817
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    ||||||||||||||||||||||| |||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||    
T  24214906 ggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 104 - 194
Target Start/End: Complemental strand, 10506385 - 10506295
Alignment:
Q  104 ttttagcatttgaccggcttttccttttcctttggcggtgcggctgacggagcagcgttggaggagttggtgcggtgaagatgacggtggt 194  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||| || || ||||| ||||||    
T  10506385 ttttaggatttgaccggcttttcctttccctttggcggtgcggctgacggagcagcgttgaaggaattggtgtggagaggatgatggtggt 10506295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 392 - 482
Target Start/End: Original strand, 26373687 - 26373778
Alignment:
Q  392 ttaagggaggtgtattgg-atcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||    
T  26373687 ttaaggggggtgtattgggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttt 26373778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 589 - 696
Target Start/End: Complemental strand, 13478376 - 13478269
Alignment:
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtcttt 688  Q
    |||||||||||| || ||||||||||| |||||||||||||| |||||| | |||||||||| | ||||| |||  |||||||||||||| |||||||||    
T  13478376 gtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtaggattttttagctaaattttagcatgataaagtcttt 13478277  T
Q  689 catgaaaa 696  Q
     |||||||    
T  13478276 tatgaaaa 13478269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 587 - 695
Target Start/End: Complemental strand, 8410526 - 8410416
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaa--ttttctagtgaaattttagcatgaaaaagt 684  Q
    ||||||||||||||||| |||||| |||| |||||||| |||||  || ||||||||||||||||| |  |||| |||||||||||||| |||| |||||    
T  8410526 tggtattcaaaatcattgaaatttggaaggattgtttactaaattggactttgatggattttgtgggattttttttagtgaaattttagtatgacaaagt 8410427  T
Q  685 ctttcatgaaa 695  Q
    |||||| ||||    
T  8410426 ctttcacgaaa 8410416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 24502091 - 24502004
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||| ||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||| ||||||||||||| |||||    
T  24502091 aggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattcttt 24502004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 8543410 - 8543545
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaag---actcttttcaatttnnnnnn 495  Q
    |||||||| ||||||||||||||||||||||||||||        ||||| ||||||| ||||||||||||||||||   ||||||||||||||          
T  8543410 ggtgtattagatcatgattctaagggattttaaaagattttttttatcataaaaaagttttgtggtattcaatcaagatcactcttttcaatttaaaaaa 8543509  T
Q  496 ngttttgtgttattcaatcaagattctttgtcattt 531  Q
     || |||||||||| |||||||||||||||| ||||    
T  8543510 agtgttgtgttatttaatcaagattctttgttattt 8543545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 346 - 396
Target Start/End: Original strand, 8756328 - 8756378
Alignment:
Q  346 atggtaaaagcatttttcattcttttttgcttctaccgtatggtagttaag 396  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8756328 atggtaaaagcatttttcattcttttttgctactaccgtatggtagttaag 8756378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 402 - 478
Target Start/End: Original strand, 32497376 - 32497452
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    |||||||||| | ||||||| ||||||||||||||       |||||||||||||||||||||||||||||||||||    
T  32497376 tgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagact 32497452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 554
Target Start/End: Complemental strand, 43166914 - 43166809
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggt 548  Q
    |||||||||||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||||| ||||||||||||       ||||||||||    
T  43166914 gaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggt 43166815  T
Q  549 attcaa 554  Q
    ||||||    
T  43166814 attcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 581 - 650
Target Start/End: Original strand, 37857191 - 37857260
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||| |||||||||||| ||||||||||||  ||| ||||||||||||||  ||||||||||||||||||    
T  37857191 gtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattggattttgatggattttgt 37857260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 654 - 716
Target Start/End: Complemental strand, 9770501 - 9770439
Alignment:
Q  654 attttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||| |||||||||| ||| ||||| | |||||| ||||||||||||||||||||||||    
T  9770501 attttctaatgaaattttaacataaaaaaatatttcatcaaaacatgagatttcttaggattg 9770439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 356 - 396
Target Start/End: Original strand, 8750666 - 8750706
Alignment:
Q  356 catttttcattcttttttgcttctaccgtatggtagttaag 396  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  8750666 catttttcattcttttctgcttctaccgtatggtagttaag 8750706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 481
Target Start/End: Complemental strand, 24501994 - 24501963
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctt 481  Q
    ||||||||||||||||||||||||||||||||    
T  24501994 aaaaagtcttgtggtattcaatcaagactctt 24501963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 450 - 479
Target Start/End: Original strand, 4403090 - 4403119
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactc 479  Q
    ||||||||||||||||||||||||||||||    
T  4403090 aaaaagtcttgtggtattcaatcaagactc 4403119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 197; Significance: 1e-107; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 25331021 - 25331337
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||  ||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  25331021 ggtgtattggatcatgattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 25331120  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||| ||||||||||    
T  25331121 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaat 25331220  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  25331221 cattcaaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 25331320  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  25331321 gagatttcttaggattg 25331337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 393 - 716
Target Start/End: Complemental strand, 41881407 - 41881082
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    |||||| ||||||||||||||||||| |||||||||||||||||        ||||||||||||||||||||||||||||||||||||||| ||||||      
T  41881407 taaggggggtgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttta 41881308  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggt 590  Q
         || ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        || |||||||    
T  41881307 aaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggt 41881208  T
Q  591 attcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttca 690  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41881207 attcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttca 41881108  T
Q  691 tgaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||||    
T  41881107 tgaaaacatgagatttcttaggattg 41881082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 395 - 716
Target Start/End: Original strand, 1044695 - 1045013
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||         
T  1044695 aggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaa 1044794  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
      || |||||||||||||||||||||| |||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  1044795 a-gtcttgtgttattcaatcaagattccttgtcatttaaaaa--gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 1044891  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    |||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  1044892 aaaaccattcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaa 1044991  T
Q  695 aacatgagatttcttaggattg 716  Q
    ||||| ||||||||||| ||||    
T  1044992 aacataagatttcttagaattg 1045013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 408 - 715
Target Start/End: Complemental strand, 32951144 - 32950837
Alignment:
Q  408 ggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgtta 507  Q
    |||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||       || ||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtta 32951045  T
Q  508 ttcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaa 607  Q
    ||||||||||||| ||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||||||||||||||||||||||||    
T  32951044 ttcaatcaagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaa 32950945  T
Q  608 tttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttc 707  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  32950944 tttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttc 32950845  T
Q  708 ttaggatt 715  Q
    ||| ||||    
T  32950844 ttaagatt 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 37046768 - 37046450
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||||| |||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||       ||     
T  37046768 ggtgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 37046669  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaa 598  Q
    ||||||||||||||||||||||||||||||||       || ||||||||||||||||| ||||||||||||||        |||||||| |||| ||||    
T  37046668 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaa 37046569  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtg-aaattttagcatgaaaaagtctttcatgaaaac 697  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||     
T  37046568 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaat 37046469  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  37046468 atgagatttcttaggattg 37046450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 22201905 - 22202221
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||| ||||||||||||||||||| ||||||       ||     
T  22201905 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtc 22202004  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  22202005 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 22202104  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||| ||||||| ||  |||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22202105 cattaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 22202204  T
Q  700 gagatttcttaggattg 716  Q
     ||||||||||| ||||    
T  22202205 tagatttcttagcattg 22202221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 400 - 686
Target Start/End: Original strand, 28541588 - 28541874
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       || |||||||||||||||||||||||||||||||||||||||||||       ||     
T  28541588 ggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtc 28541687  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||| ||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  28541688 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 28541787  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28541788 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 28541874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 391 - 716
Target Start/End: Complemental strand, 39479681 - 39479355
Alignment:
Q  391 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttn 490  Q
    |||||||| ||||||||||||||||||| ||||  |||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||     
T  39479681 gttaaggg-ggtgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattta 39479583  T
Q  491 nnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn--gtctagtg 588  Q
          || |||||||||||||||||||||| |||||||||       |||||||||||||||||||| ||||||||||||||         | || |||    
T  39479582 aaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtg 39479483  T
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtcttt 688  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||    
T  39479482 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtcttt 39479383  T
Q  689 catgaaaacatgagatttcttaggattg 716  Q
    ||||||| ||||||||||||||||||||    
T  39479382 catgaaagcatgagatttcttaggattg 39479355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 177; E-Value: 5e-95
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 55302733 - 55303049
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| ||||||||| |||||||||||| ||||       || |||||||||| || |||||||||||||||||||||||||||||       ||     
T  55302733 ggtgtattgaatcatgattttaagggattttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagtc 55302832  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||| ||||||||||||||||||||||||       ||| |||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  55302833 ttgtgtttttcaatcaagattctttgtcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 55302932  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  55302933 cattcaaatttcgaaggattgtttaataaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 55303032  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  55303033 gagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 418 - 716
Target Start/End: Complemental strand, 34228880 - 34228583
Alignment:
Q  418 tctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaag 517  Q
    |||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||       || | ||||||||||||||||    
T  34228880 tctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtct-gtgttattcaatcaag 34228782  T
Q  518 attctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaa 617  Q
    ||||||||||||||       ||| |||||||||||||||||| ||||||||||||       ||||||||||||||||||||||| ||||||||||  |    
T  34228781 attctttgtcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatga 34228682  T
Q  618 ttgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34228681 ttgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 34228583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 164; E-Value: 3e-87
Query Start/End: Original strand, 399 - 716
Target Start/End: Original strand, 1112783 - 1113099
Alignment:
Q  399 aggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnng 497  Q
    |||||||||||||||||||||||||  |||||||||||        ||||||||||||||||||| ||||||||||||||||||| | ||||       |    
T  1112783 aggtgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaag 1112880  T
Q  498 ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
    | |||| |||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||||||||||||||    
T  1112881 tattgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 1112980  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||| ||  |||||||||||||||||||||||||||||||||||| |||| ||||| |||||||| ||||||||||||||||||||||||    
T  1112981 atcattcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaac 1113080  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  1113081 atgagatttcttaggattg 1113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 161; E-Value: 2e-85
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 30009993 - 30009677
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       || ||||||||||||| | |||||||||||||||||||| ||||||       ||     
T  30009993 ggtgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaagtc 30009894  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||||||||| |||||| ||||||| ||||||       ||| |||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  30009893 ttgtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 30009794  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||| ||||||  ||  |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||    
T  30009793 catttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacat 30009694  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  30009693 gagatttcttaagattg 30009677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 500 - 716
Target Start/End: Original strand, 12112935 - 12113151
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||       ||||| |||||||||||||    
T  12112935 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaaaat 12113034  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12113035 cattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 12113134  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||| ||||||    
T  12113135 gagatttcttgggattg 12113151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 24131288 - 24130981
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  24131288 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 24131189  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       ||||||||||             
T  24131188 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggt--------- 24131098  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatg-aaaaagtctttcatgaaaaca 698  Q
     ||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| ||||| |||||||||||||||    
T  24131097 -attcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaaca 24130999  T
Q  699 tgagatttcttaggattg 716  Q
    ||||||||||||||||||    
T  24130998 tgagatttcttaggattg 24130981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 7007263 - 7007580
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gt 498  Q
    |||| |||| ||||||||| ||||||||||||| |||       || |||||||||| ||||||||||||||||||||||||||||||||        ||    
T  7007263 ggtggattgaatcatgattttaagggattttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaaagt 7007362  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
     ||||||||||||||||||||||| ||||||||       ||| |||||||||||||||| ||||||||||||||       ||||||||||||||||||    
T  7007363 cttgtgttattcaatcaagattctctgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaa 7007462  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||  | |||||||||||||    
T  7007463 tcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaaca 7007562  T
Q  699 tgagatttcttaggattg 716  Q
    |||||||||||| |||||    
T  7007563 tgagatttcttaagattg 7007580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 397 - 716
Target Start/End: Complemental strand, 46635962 - 46635648
Alignment:
Q  397 ggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaa-gtcttgtggtattcaatcaagactcttttcaatttnnnnnn 495  Q
    ||||||||||||||||||||||||||| ||||||||||||       ||||||||||| |||||||||||||||||||||||||||| ||||||          
T  46635962 ggaggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaa 46635863  T
Q  496 ngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattca 595  Q
      | |||| |||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       || |||| |||||||    
T  46635862 aatcttgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattca 46635763  T
Q  596 aaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaa 695  Q
    |||||||||||||||||||| |||||||||||||| |||||      |||||||||| ||||| |||||||||||||||||||||||||||||||| |||    
T  46635762 aaatcattcaaatttcgaaggattgtttaataaataagatt------gattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaa 46635669  T
Q  696 acatgagatttcttaggattg 716  Q
    |||||||||||||||||||||    
T  46635668 acatgagatttcttaggattg 46635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 401 - 716
Target Start/End: Complemental strand, 31315043 - 31314742
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||| ||||||||||       || |    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 31314944  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    ||||||||| |||||||||||||||||||||       ||||||||||||||||     ||||||||||||||       ||||||||||||||||||||    
T  31314943 tgtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaag----actcttaatcacttaaaaaaagtctagtggtattcaaaatc 31314848  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||| |||||||||||||||||||          ||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31314847 attcaaatttcgaaggattgtttaataaatcagat----------tttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 31314758  T
Q  701 agatttcttaggattg 716  Q
    ||||||||||||||||    
T  31314757 agatttcttaggattg 31314742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 138; E-Value: 9e-72
Query Start/End: Original strand, 393 - 695
Target Start/End: Complemental strand, 19741230 - 19740929
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| | ||||||  |||||||||||||  ||||||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||       
T  19741230 taagggggatgtattcaatcatgattctaaaagattttaaaagacttttt-atcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 19741132  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||||||||||||||||||||||||||||||       ||| ||||||||||| |||| ||| ||||||||||       |||| |||||||    
T  19741131 aaaagtcttgtgttattcaatcaagattctttgtcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtat 19741032  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    | ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  19741031 taaaaatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatg 19740932  T
Q  693 aaa 695  Q
    |||    
T  19740931 aaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 400 - 686
Target Start/End: Complemental strand, 7250089 - 7249795
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gt 498  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||| ||||||||||||||||||||||||||||||||||        ||    
T  7250089 ggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaaaaaaagt 7249990  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-------gtctagtggta 591  Q
     |||||||||||||||||||||||| |||||||        ||||||||||||| ||||| |||||| || ||||              |||||||||||    
T  7249989 cttgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtctagtggta 7249890  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  7249889 ttcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 133; E-Value: 9e-69
Query Start/End: Original strand, 400 - 715
Target Start/End: Complemental strand, 40537461 - 40537161
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||| |||||||||||||||||       ||||| |||||||||||||||||||||| ||||||||||  |||||       ||     
T  40537461 ggtgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtc 40537362  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||| ||||||||||||       |||||||||||||||||||||||||||||||||||       ||     ||||||||||||    
T  40537361 ttgtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaatgt-----ggtattcaaaat 40537267  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||| ||||||||||  ||||||||||||||| ||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||    
T  40537266 catttaaatttcgaatgattgtttaataaatctgattttgatggattttgtgg----------tgaaattttagcatgaaaaagtctttcatgaaaacat 40537177  T
Q  700 gagatttcttaggatt 715  Q
    ||||||||||||||||    
T  40537176 gagatttcttaggatt 40537161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 448 - 716
Target Start/End: Original strand, 3436531 - 3436799
Alignment:
Q  448 tgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtgg 547  Q
    ||||||||||||||||||||||||||| ||||||||||||||        | ||||||||||||||||||||| |||||| |||        |||||||     
T  3436531 tgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtga 3436630  T
Q  548 tattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattt 647  Q
    ||||||||||| ||||||||||| ||        |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  3436631 tattcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattt 3436730  T
Q  648 tgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||| ||||| ||||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||    
T  3436731 tgtgggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttcttagaattg 3436799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 539 - 716
Target Start/End: Original strand, 42786713 - 42786890
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcatatttt 42786812  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |||||    
T  42786813 gatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttcttatgattg 42786890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 5441296 - 5441603
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  5441296 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 5441395  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  5441396 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 5441495  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  5441496 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 5441595  T
Q  702 gatttctt 709  Q
    ||||||||    
T  5441596 gatttctt 5441603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 27767948 - 27768255
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||| | ||| ||||||       || ||    
T  27767948 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaagtctt 27768047  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  27768048 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 27768147  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  27768148 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 27768247  T
Q  702 gatttctt 709  Q
    ||||||||    
T  27768248 gatttctt 27768255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 54341036 - 54341343
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  54341036 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 54341135  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
     || ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  54341136 atggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 54341235  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  54341236 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 54341335  T
Q  702 gatttctt 709  Q
    ||||||||    
T  54341336 gatttctt 54341343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 51320813 - 51321120
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| || |||||||||||       || |||||||| | ||||||||||||||||||||| ||| ||| ||       |||||    
T  51320813 tgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaaaaaagtttt 51320912  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  51320913 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 51321012  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||||||| |||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  51321013 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaagatga 51321112  T
Q  702 gatttctt 709  Q
    ||||||||    
T  51321113 gatttctt 51321120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 402 - 672
Target Start/End: Original strand, 23464845 - 23465117
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnn--atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||| |||||||||||| |||||||||||         ||||||||||||||||||||||||||||||||||||||| |||| |       ||     
T  23464845 tgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaaaagtc 23464944  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||| ||||||||||||||||| |||||||||       || ||||  ||||||||||| ||||||||||||||       ||||||||||||||||||     
T  23464945 ttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattcaaaac 23465044  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 672  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||    
T  23465045 cattcaaatttcgaaggattgtttaataaatcagaatttgatggattttgtgggattttctagttaaatttta 23465117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 400 - 659
Target Start/End: Complemental strand, 25504954 - 25504696
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||| | |||||| ||||||||||| |       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  25504954 ggtgtattggatcagg-ttctaatggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 25504856  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||  ||||||        ||||||| ||||||||||| ||||||||||||||       ||| |||| ||||||||||    
T  25504855 ttgtgttattcaatcaagattcttgatcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaat 25504756  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttc 659  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  25504755 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttc 25504696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 581 - 716
Target Start/End: Original strand, 41320881 - 41321016
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  681 aagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||| |||||||||||||||||| |||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattg 41321016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 500 - 687
Target Start/End: Original strand, 25446041 - 25446227
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    |||| |||||||||||||||| ||||||||||        ||||||||||||||||||| ||||||||||||||       |||||||||||||||||||    
T  25446041 ttgtattattcaatcaagatt-tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 25446139  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctt 687  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  25446140 cattcaaatttcgaatgattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 37828671 - 37828409
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||||| ||||||||||||       |||||| |    
T  37828671 atgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaatcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgag 37828572  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| | | || |||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  37828571 gtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggatt 37828472  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| |||||||  | |||||||||||||||||||| ||||||||||||    
T  37828471 ttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaagatgagatttctt 37828409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 396 - 716
Target Start/End: Original strand, 53275722 - 53276046
Alignment:
Q  396 gggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnn 495  Q
    |||| |||||||||||||||||||||||| ||||||||| |       ||||||||||| |||||  | |||||||||||||||||| |||||           
T  53275722 gggatgtgtattggatcatgattctaaggaattttaaaaaatatttttatcatgaaaaaatcttgcaggattcaatcaagactctttccaattaaaaaaa 53275821  T
Q  496 ng---ttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
         | |||||||||||||| |||||| ||||||||||       ||||||| |||||||||||| | | ||||||||||       |||||||| |||    
T  53275822 aaaaatcttgtgttattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatat 53275921  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttca-t 691  Q
    | ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||  |||||||| | |||||||||||||||||||||||||| |    
T  53275922 ttaaaatcattcaaatttcgaaggattgtgtaataaatcagattttgatggattttgtgagattttctaataaaattttagcatgaaaaagtctttcatt 53276021  T
Q  692 gaaaacatgagatttcttaggattg 716  Q
     ||||| | |||||| |||||||||    
T  53276022 aaaaactttagattttttaggattg 53276046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 449 - 709
Target Start/End: Complemental strand, 54853735 - 54853475
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggt 548  Q
    |||||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||||| ||||| ||||||       ||||||  ||    
T  54853735 gaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagt 54853636  T
Q  549 attcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||| ||| || |||||||       |||| |||||||||||||| ||||||||||| ||| ||||||||||||||  ||||||||||||||||    
T  54853635 attcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattcaaatttcaaaggattgtttaataaattggattttgatggatttt 54853536  T
Q  649 gtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||| ||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  54853535 gtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgagatttctt 54853475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 13 - 116
Target Start/End: Original strand, 48952137 - 48952240
Alignment:
Q  13 gagaggttttcgatgccatccgggaggccaacttcttgggaagggaattgaaaggtttgaacgttgaagttgttgttagatttgggaaggattttagcat 112  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  48952137 gagaggttttcgatgccatcggggaggccaacttcttgggaagggaattgaaaggtttgaaagttgaagttgttgttagatttgggaaggattttagcat 48952236  T
Q  113 ttga 116  Q
    ||||    
T  48952237 ttga 48952240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 500 - 716
Target Start/End: Original strand, 9163066 - 9163274
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       |||||||||||||||||||| | | || ||||| |       |||| ||| ||||||||||    
T  9163066 ttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaaaat 9163165  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||        ||||||||||||    
T  9163166 cattcaaatttcgaaggattgtttaataaattaaattttgatggattttgtggaattttctagtgaaattttagcatgaa--------tcatgaaaacat 9163257  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  9163258 gagatttcttatgattg 9163274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 584 - 716
Target Start/End: Complemental strand, 27454210 - 27454078
Alignment:
Q  584 tagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaag 683  Q
    ||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  27454210 tagtggtattcaaaatcattcaaattttgaaagattatttaataaatcagattttgatgaattttgtggaattttctagtgaaattttggcatgaaaaag 27454111  T
Q  684 tctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||| | |||| ||| |||||    
T  27454110 tctttcatgaaaacataatatttgttaagattg 27454078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 450 - 706
Target Start/End: Original strand, 37915767 - 37916023
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||| |||   | ||       || ||||| ||||||||||||| ||| | ||||||       |||||| ||||    
T  37915767 aaaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggta 37915866  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  37915867 ttcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 37915966  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
    ||| ||||| ||||| | ||||| || ||||||||| |||||||||| || ||||||    
T  37915967 tgggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagattt 37916023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 30967613 - 30967316
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| |||||| || ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  30967613 tgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 30967514  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| | | || |||||||       |||| ||||||||||||||||    
T  30967513 gtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatca 30967414  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||| ||| ||||||||||||||          |||||||||||| ||||| ||||| ||||||| || |||||| ||||||||||||| || |    
T  30967413 ttcaaatttcaaaggattgtttaataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataa 30967324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 500 - 709
Target Start/End: Original strand, 23987204 - 23987403
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||| | ||||||||||||       |||||| ||||||||||||||||| || |||||||       |||| ||||||||||||||    
T  23987204 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaat 23987303  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  23987304 cattcaaatttcgaaggattgtttaataaattagattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 23987393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 581 - 709
Target Start/End: Original strand, 48261198 - 48261326
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  681 aagtctttcatgaaaacatgagatttctt 709  Q
    || ||||||||||||| ||||||||||||    
T  48261298 aaatctttcatgaaaatatgagatttctt 48261326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 32322028 - 32322290
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||| ||||||||||||||||||| | |||  || ||       ||  |||| |||| |||||||| ||||||||||||       |||||| |    
T  32322028 atgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagtcatgtgatatttaatcaagactctttgtcattttaaaaaagtcttgag 32322127  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| | | || |||||||       |||| |||||||||||||||||||||||||||||| ||||||||||||||   |||||||||||||    
T  32322128 gtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattgaattttgatggatt 32322227  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| |||||||  | ||||| ||||||||| |||| ||||||||||||    
T  32322228 ttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaagatgagatttctt 32322290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 587 - 707
Target Start/End: Complemental strand, 44770982 - 44770862
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    |||||||||||||||||||||||| |||| ||||||||||||||  ||||||| |||||||||||| |||||||||||||||||||  | ||||||||||    
T  44770982 tggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtct 44770883  T
Q  687 ttcatgaaaacatgagatttc 707  Q
    |||||||  ||||||||||||    
T  44770882 ttcatgacgacatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 497 - 716
Target Start/End: Complemental strand, 39307472 - 39307253
Alignment:
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaa 596  Q
    |||||||| ||||||||||||||| |||| |||||       |||||||||||||||||||| | |||| |||| ||       |||| ||||||||||     
T  39307472 gttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcat 39307373  T
Q  597 aatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 696  Q
    ||||||||||||||| ||  ||| |||||| |||    |||||||| ||||||||| ||||||||||||||||||| ||||||||||| | | || ||||    
T  39307372 aatcattcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaa 39307273  T
Q  697 catgagatttcttaggattg 716  Q
    ||||||||||||||| ||||    
T  39307272 catgagatttcttagaattg 39307253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 403 - 639
Target Start/End: Complemental strand, 49835126 - 49834890
Alignment:
Q  403 gtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttg 502  Q
    ||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||| ||| ||| ||| ||       || |||    
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  503 tgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcat 602  Q
    || ||||||||||||| ||||||||||||       | |||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 49834927  T
Q  603 tcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    ||||||||||||| ||||||||||||||  |||||||    
T  49834926 tcaaatttcgaaggattgtttaataaattggattttg 49834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 402 - 652
Target Start/End: Complemental strand, 29649981 - 29649731
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| | ||||||||||||       || |||||||||| ||||||||||||||||||||| ||| ||||||       || ||    
T  29649981 tgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 29649882  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||  || || | ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  29649881 gtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 29649782  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgg 652  Q
    |||||||||||||  ||||||||||||||  ||||||||||||||||||||    
T  29649781 ttcaaatttcgaaagattgtttaataaattggattttgatggattttgtgg 29649731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 448 - 709
Target Start/End: Original strand, 12913161 - 12913413
Alignment:
Q  448 tgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||||||  |||||        || ||||| |||| ||| |||| ||||||||||||       |||||| |    
T  12913161 tgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaaagtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgag 12913260  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    ||||||||||||   | || |||| ||       ||||  |||||||||||||||||||||||| |||| ||||||||||||||          ||||||    
T  12913261 gtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaaaatcattcaaattttgaaggattgtttaataaat----------tggatt 12913350  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||||||||||||||||| || |||||||| ||||||||| ||||||||||||||    
T  12913351 ttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagatttctt 12913413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 8711978 - 8712065
Alignment:
Q  622 ttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||  |||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  8711978 ttaataaattggattttgatggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttctt 8712065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 531
Target Start/End: Original strand, 20021226 - 20021365
Alignment:
Q  392 ttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnn 491  Q
    ||||||| | |||||||||| || ||| |||||||||||||||||       || ||||||||||||||||||||| |||||||||||||| ||||||      
T  20021226 ttaagggggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaa 20021325  T
Q  492 nnnnngttttgtgttattcaatcaagattctttgtcattt 531  Q
         |||||||| ||||||||||||||||||||||||||    
T  20021326 aaaaagttttgtggtattcaatcaagattctttgtcattt 20021365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 622 - 709
Target Start/End: Original strand, 24736447 - 24736534
Alignment:
Q  622 ttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||||||  |||||||||||||||||||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||||||    
T  24736447 ttaataaattggattttgatggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttctt 24736534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 587 - 709
Target Start/End: Complemental strand, 56445474 - 56445362
Alignment:
Q  587 tggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtct 686  Q
    ||||||||||||||||||||||||||||  ||||||||||||||          |||||||||||| |||||||||||||| ||||||| ||||||||||    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaat----------tggattttgtgggattttctagtgaaactttagcaagaaaaagtct 56445385  T
Q  687 ttcatgaaaacatgagatttctt 709  Q
    ||||| || ||||||||||||||    
T  56445384 ttcataaagacatgagatttctt 56445362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 581 - 709
Target Start/End: Original strand, 41725196 - 41725321
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaa 680  Q
    |||| ||| ||||||||||||||||||||| |||| |||||||||   ||  |||||||||| ||||||||| ||||| ||||| ||||||| || ||||    
T  41725196 gtcttgtgatattcaaaatcattcaaattttgaaggattgtttaa---attggattttgatgaattttgtgggattttatagtgtaattttaacaagaaa 41725292  T
Q  681 aagtctttcatgaaaacatgagatttctt 709  Q
    || ||||||||||||| ||||||||||||    
T  41725293 aaatctttcatgaaaagatgagatttctt 41725321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 36479447 - 36479249
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||| | ||||||||||||       |||||| |||||||||| || | | || |||||||       |||| ||||||||||||||    
T  36479447 ttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaaaat 36479348  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||||||| ||| ||||||||||  ||||||||||||||||           ||||||||||||||||  ||||||||||| ||||||||||    
T  36479347 tattcaaatttcgaaggattatttaataaattggattttgatggatttt-----------tagtgaaattttagcaaaaaaaagtcttttatgaaaacat 36479259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 641 - 716
Target Start/End: Original strand, 11090435 - 11090510
Alignment:
Q  641 tggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||||||||||||||||||||||    
T  11090435 tggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattg 11090510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 500 - 672
Target Start/End: Original strand, 28370914 - 28371086
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||| | |||||||| |||       |||||| | ||||||||||||||| || |||||||       ||||  |||||||||||||    
T  28370914 ttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaaaat 28371013  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 672  Q
    |||||||||||  ||| ||||||||||||||   |||||| || ||||||||| |||||||||||||||||||    
T  28371014 cattcaaattttaaaggattgtttaataaattgaattttggtgaattttgtgggattttctagtgaaatttta 28371086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 400 - 531
Target Start/End: Original strand, 41320640 - 41320769
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||  ||||||||||||       || |||||||||||  ||||||||||||||||||| ||| ||||||       ||     
T  41320640 ggtgtattggatcatgattctaaaagattttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaatgtc 41320737  T
Q  500 ttgtgttattcaatcaagattctttgtcattt 531  Q
    ||||||||||||||||||||||||||||||||    
T  41320738 ttgtgttattcaatcaagattctttgtcattt 41320769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 450 - 706
Target Start/End: Original strand, 50018191 - 50018437
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||| ||| ||||||       || || || ||||||||||||| ||||||||||||       |||||| ||||    
T  50018191 aaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggta 50018290  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||| ||||| ||| ||  ||| ||       |||| ||||||||||| ||||||||||||| |||| ||||||||||||||   ||||| ||||||||||    
T  50018291 ttccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatcattcaaattttgaaggattgtttaataaattgaattttaatggattttg 50018390  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
              ||||| ||||||| || |||||||||||||| ||||| |||||||||    
T  50018391 ----------tagtgtaattttaacaagaaaaagtctttcaagaaaagatgagattt 50018437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 481
Target Start/End: Original strand, 42786657 - 42786739
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactctt 481  Q
    |||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||    
T  42786657 ggtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctt 42786739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 506 - 709
Target Start/End: Complemental strand, 49501721 - 49501526
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||| ||||||||||||        ||||| ||||||||||||| ||| || |||||||       |||| |||| |||||||||||||||    
T  49501721 tattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattca 49501622  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttc--atgaaaacatgaga 703  Q
    |||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||  || |||| ||||||    
T  49501621 aatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgaga 49501532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 506 - 709
Target Start/End: Complemental strand, 49507786 - 49507591
Alignment:
Q  506 tattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattca 605  Q
    ||||||||||||| ||||||||||||        ||||| ||||||||||||| ||| || |||||||       |||| |||| |||||||||||||||    
T  49507786 tattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaatcattca 49507687  T
Q  606 aatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttc--atgaaaacatgaga 703  Q
    |||||||||  ||||||||||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||  || |||| ||||||    
T  49507686 aatttcgaatgattgtttaataaat----------tggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgaga 49507597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 581 - 710
Target Start/End: Complemental strand, 41581923 - 41581795
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatg-aa 679  Q
    |||| |||||||| | | |||||||||||| ||| |||||||||||||||  ||||  |||  ||||||||| ||||||||||||||||||| |||| ||    
T  41581923 gtctcgtggtatttagagtcattcaaattttgaataattgtttaataaattggatt--gatatattttgtgggattttctagtgaaattttaacatgaaa 41581826  T
Q  680 aaagtctttcatgaaaacatgagatttctta 710  Q
    ||| | ||||||| |||||||||||||||||    
T  41581825 aaaatatttcatgtaaacatgagatttctta 41581795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 564
Target Start/End: Original strand, 37915675 - 37915839
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||| ||||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| |||  || ||       ||     
T  37915675 ggtgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtc 37915774  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactct 564  Q
    ||||| ||||||||||||| | ||||||| ||       |||||||||||||||||||| |||||    
T  37915775 ttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactct 37915839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 539 - 715
Target Start/End: Original strand, 28483928 - 28484093
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||||||||||||| ||| ||||||||||            
T  28483928 gtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaat-------- 28484019  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 715  Q
      |||||||||| | ||||| ||||| || |||| || |||||||||||||||||||| | ||||||||||| ||||    
T  28484020 --tggattttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagatt 28484093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 500 - 639
Target Start/End: Complemental strand, 32684203 - 32684065
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| |||||||| |||||||||||||||||       || ||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||    
T  32684203 ttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaaaat 32684105  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||||||||||||||| ||||||||||||||  |||||||    
T  32684104 cattcaaatttcgaaggattgtttaataaattggattttg 32684065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 400 - 526
Target Start/End: Original strand, 49469211 - 49469337
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||| |||| |||||||||||        |  |||| ||||||||||||||| |||||||||||||| ||||||       ||     
T  49469211 ggtgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaatttaagaaaagtc 49469310  T
Q  500 ttgtgttattcaatcaagattctttgt 526  Q
    |||||||||||||| ||||||| ||||    
T  49469311 ttgtgttattcaattaagattccttgt 49469337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 581 - 639
Target Start/End: Original strand, 5800049 - 5800107
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    |||| |||||||||||||||||||||||||| ||| ||||||||||||||  |||||||    
T  5800049 gtcttgtggtattcaaaatcattcaaatttcaaaggattgtttaataaattggattttg 5800107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 482
Target Start/End: Original strand, 23987139 - 23987228
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||| | |||||||||| | |||| || ||||||||||||||       || |||||||||||||||||||||||||||| |||||||    
T  23987139 taagggggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactcttt 23987228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 613 - 707
Target Start/End: Original strand, 20021436 - 20021531
Alignment:
Q  613 aagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagc-atgaaaaagtctttcatgaaaacatgagatttc 707  Q
    ||| |||||||||||||| |||||||| |||||||| ||| ||||| || |||||||||| | |  ||||| ||||||||||| |||| |||||||    
T  20021436 aaggattgtttaataaattagattttgctggattttatgggattttttaatgaaattttaacaaaaaaaaaatctttcatgaagacataagatttc 20021531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 476
Target Start/End: Original strand, 25445984 - 25446059
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaaga 476  Q
    |||||||||||| |||||| |||||||||||||||||       ||||||||||||||||||  |||||||||||||    
T  25445984 ggtgtattggat-atgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaaga 25446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 450 - 483
Target Start/End: Original strand, 41320802 - 41320835
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactctttt 483  Q
    ||||||||||||||||||||||||||||||||||    
T  41320802 aaaaagtcttgtggtattcaatcaagactctttt 41320835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Original strand, 9163058 - 9163090
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  9163058 aaaaagtcttgtggtattcaatcaagactcttt 9163090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Original strand, 28370903 - 28370938
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||| |||||||    
T  28370903 atgaaaaagtcttgtggtattcaatcaaaactcttt 28370938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Complemental strand, 36479458 - 36479423
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||| |||||||    
T  36479458 atgaaaaagtcttgtggtattcaatcaaaactcttt 36479423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Complemental strand, 44771081 - 44771046
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||| |||||||||||||||||||    
T  44771081 atgaaaaagtcttgtgatattcaatcaagactcttt 44771046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 660 - 706
Target Start/End: Complemental strand, 32684064 - 32684018
Alignment:
Q  660 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  32684064 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 531
Target Start/End: Original strand, 29855576 - 29855702
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| | ||||||| || |||||||||||       || |||||||||||||||| |||||||| |||||| ||| ||||||       |||||||    
T  29855576 tattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaagttttgt 29855675  T
Q  504 gttattcaatcaagattctttgtcattt 531  Q
    | |||| |||||||| | ||||||||||    
T  29855676 g-tatttaatcaagactgtttgtcattt 29855702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 403 - 436
Target Start/End: Complemental strand, 44775986 - 44775953
Alignment:
Q  403 gtattggatcatgattctaagggattttaaaaga 436  Q
    |||||||||||||||||||| |||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaaga 44775953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 708
Target Start/End: Complemental strand, 55047674 - 55047641
Alignment:
Q  675 atgaaaaagtctttcatgaaaacatgagatttct 708  Q
    ||||||||||||||||||||||||||| ||||||    
T  55047674 atgaaaaagtctttcatgaaaacatgatatttct 55047641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 21222032 - 21222347
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||       |||    
T  21222032 ggtgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtt 21222131  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    | ||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||       |||||| ||||||||||||    
T  21222132 t-gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaat 21222230  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  21222231 cattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacat 21222330  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  21222331 gagatttcttaggattg 21222347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 393 - 716
Target Start/End: Complemental strand, 45760333 - 45760009
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| ||||||||||||||       
T  45760333 taaggggggtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaa 45760234  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtca-tttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggta 591  Q
        || ||||||||||||||||||||||||||||| |||       ||| |||||||||||||||| ||||||||||||||       |||||||||||    
T  45760233 aaaagtcttgtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggta 45760134  T
Q  592 ttcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcat 691  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| ||    
T  45760133 ttcaaaatcattcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgat 45760034  T
Q  692 gaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||||    
T  45760033 gaaaacatgagatttcttaggattg 45760009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 401 - 716
Target Start/End: Complemental strand, 47654669 - 47654351
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnn-atcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngt- 498  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||| ||||||||||||| ||||||       ||     
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtc 47654570  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaa 597  Q
    |||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||        |||||||||||||||||    
T  47654569 tttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaa 47654470  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    || ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  47654469 attattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaac 47654370  T
Q  698 atgagatttcttaggattg 716  Q
    |||||||||||||||||||    
T  47654369 atgagatttcttaggattg 47654351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 35279556 - 35279872
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||| ||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       |      
T  35279556 ggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagac 35279655  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||| ||||||||||       |||||||||||||||||||    
T  35279656 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaaaat 35279755  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||||||||||||    
T  35279756 catttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaacat 35279855  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||| ||||    
T  35279856 gagatttcttagaattg 35279872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 184; E-Value: 3e-99
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 49198583 - 49198269
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||||||||||||||||||| |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||       ||     
T  49198583 ggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaa-gtc 49198485  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       || |||||||||||||| || ||||||||||||||       ||  |||||||||||||||    
T  49198484 ttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaaaat 49198386  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  49198385 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 49198286  T
Q  700 gagatttcttaggattg 716  Q
    || ||||||||||||||    
T  49198285 gatatttcttaggattg 49198269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 28824688 - 28824373
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||  |||||       ||     
T  28824688 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtc 28824589  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||| ||||||||||       |||||||||||||||||||| ||||||||||||||       |||| ||||||||||||||    
T  28824588 ttgtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaat 28824489  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||| || |||||||    
T  28824488 cattcaaatttcgaaga-ttgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacat 28824390  T
Q  700 gagatttcttaggattg 716  Q
    |||||||||||||||||    
T  28824389 gagatttcttaggattg 28824373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 6304570 - 6304252
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gt 498  Q
    ||||||||||||||||||||||| |||||||||||||        |||||||||||||||||||||||||||||||||| ||| ||||||        ||    
T  6304570 ggtgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaaagt 6304471  T
Q  499 tttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaa-ctcttaatcacttnnnnnnngtctagtggtattcaaa 597  Q
      |||||||||||||||||||||||||||||||       |||||||||||||||| ||||| |||||||||||||       |||||||||||||||||    
T  6304470 actgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaa 6304371  T
Q  598 atcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 697  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  6304370 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 6304271  T
Q  698 atgagatttcttaggattg 716  Q
    |||| |||||||| |||||    
T  6304270 atgaaatttcttatgattg 6304252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 395 - 716
Target Start/End: Complemental strand, 50192872 - 50192550
Alignment:
Q  395 agggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnn 494  Q
    |||| ||||||||| ||||||||||||||| |||||||||||       || |||||||||||||||||||||||||||||| ||||| ||||||         
T  50192872 aggggggtgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaa 50192773  T
Q  495 nngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtatt 593  Q
       | |||||||||||||||||||||| |||||||||       |||||||||||||||||||| ||||||||||||||        |||||||||||||    
T  50192772 aaatcttgtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtatt 50192673  T
Q  594 caaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatga 693  Q
    ||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  50192672 caaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatga 50192573  T
Q  694 aaacatgagatttcttaggattg 716  Q
    ||||||||||||| |||||||||    
T  50192572 aaacatgagattttttaggattg 50192550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 172; E-Value: 5e-92
Query Start/End: Original strand, 450 - 716
Target Start/End: Complemental strand, 19452074 - 19451808
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||||||||||||||||||       |||||||||||    
T  19452074 aaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggta 19451975  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    || |||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||    
T  19451974 tttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttg 19451875  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  19451874 tgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttatgattg 19451808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 400 - 716
Target Start/End: Complemental strand, 35679444 - 35679128
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    ||||||||| ||||||||| |||||||||||||||||       || ||||||||||||||||||||||||||||| |||||||||||||       ||     
T  35679444 ggtgtattgaatcatgattttaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtc 35679345  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||||||||||||||||        |||||| |||||||||||| ||||||||||||||       |||  ||||||||||||||    
T  35679344 ttgtggtattcaatcaagattctttgtcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaat 35679245  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  35679244 cattcaaatttcgaaggattgtttaataaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacat 35679145  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  35679144 gagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 400 - 681
Target Start/End: Original strand, 730033 - 730314
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  730033 ggtgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 730131  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaa 598  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||| ||||||||||||||        ||||||||||||||||||    
T  730132 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaa 730231  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaa 681  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  730232 tcattcaaatttcgacgaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaa 730314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 404 - 711
Target Start/End: Original strand, 49417972 - 49418279
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||||||||||||||| ||||||||||||       |||||||||||||| |||| ||||||||||||||||||| ||||||       || ||||    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagtcttgt 49418071  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    |||||||||||||||||| |||||||||        |  ||||||||||||| || ||||||||||||||       |||||||||||||||||||||||    
T  49418072 gttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 49418171  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||| ||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgaga 49418271  T
Q  704 tttcttag 711  Q
    ||||||||    
T  49418272 tttcttag 49418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 458 - 716
Target Start/End: Original strand, 45535886 - 45536150
Alignment:
Q  458 ttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatca 557  Q
    ||||| ||||||||||||||||||| ||||||       || ||||||||||||||||| ||||||||||||||       || ||||||||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatca 45535985  T
Q  558 aaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattt 657  Q
    | |||||||||| |||       ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  45535986 agactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattt 45536085  T
Q  658 tctagtgaaattttagcatgaaaaagtctttcat------gaaaacatgagatttcttaggattg 716  Q
    ||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||    
T  45536086 tctagtgaaattttagcatgaaaaagtctttcatgaaaacgaaaacatgagatttcttaggattg 45536150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 450 - 716
Target Start/End: Original strand, 47780644 - 47780911
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnn-gttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggt 548  Q
    ||||||||||||| ||||||||||||||||||||||||||        || ||||||||||||||||||||| | ||||||||       ||| ||||||    
T  47780644 aaaaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggt 47780743  T
Q  549 attcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||| ||||||||||||||       |||||||| |||||||||||||||||| ||  ||| ||||||||||||||||||||||||||||||||    
T  47780744 attcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggatttt 47780843  T
Q  649 gtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  47780844 gtgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattg 47780911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 450 - 716
Target Start/End: Original strand, 29556038 - 29556305
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||| ||||||||||||||||||||||||||||||||       || |||||||||||||| ||||||| |||| ||||       |||||||| ||    
T  29556038 aaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaattaagattcattgttatttaaaaaaagtcttgtgtta 29556137  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||||||||||||||        ||||||| |||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||     
T  29556138 ttcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaaagattgtttaataaattagattttgatggatttta 29556237  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaa-acatgagatttcttaggattg 716  Q
    ||| |||||||| |||||||||||| ||||||||||||| |||||| |||||||||||||||||||||    
T  29556238 tgggattttctaatgaaattttagcttgaaaaagtcttttatgaaacacatgagatttcttaggattg 29556305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 128; E-Value: 9e-66
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 6312460 - 6312767
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       |||||    
T  6312460 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtttt 6312559  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| |||||||| |||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  6312560 gtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 6312659  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  6312660 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 6312759  T
Q  702 gatttctt 709  Q
    ||||||||    
T  6312760 gatttctt 6312767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 404 - 687
Target Start/End: Original strand, 48524208 - 48524490
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    ||||||||||||||||||||| |||||||||||       ||||| ||||||| |||  |||||||||||||||||||| ||||||       || ||||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt-atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    ||||||||||||||||| ||||||||||        || ||||||||| |||||||||||||||||||||       |||| ||| ||||||||||||||    
T  48524307 gttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcatt 48524406  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctt 687  Q
    ||||||| |||  ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  48524407 caaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 29396702 - 29396395
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| || |||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||        | ||    
T  29396702 tgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaatctt 29396603  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
     || ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  29396602 ttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 29396503  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  29396502 ttcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 29396403  T
Q  702 gatttctt 709  Q
    ||||||||    
T  29396402 gatttctt 29396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 402 - 716
Target Start/End: Complemental strand, 9577746 - 9577432
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||| ||||||||||||||||       || |||||||||| ||||||||||||||||||||| ||| ||| ||       || ||    
T  9577746 tgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaagtatt 9577647  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||  |||||||||||||  |||||||||||       |||||| | |||| |||||||||| || |||||||       |||| ||| ||||||||||||    
T  9577646 gttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaaatca 9577547  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||  |||||||||||||||||||  |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  9577546 ttcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaacatga 9577447  T
Q  702 gatttcttaggattg 716  Q
    |||||||| ||||||    
T  9577446 gatttcttgggattg 9577432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 115; E-Value: 5e-58
Query Start/End: Original strand, 400 - 716
Target Start/End: Original strand, 33025396 - 33025703
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||| || |||||||||       ||||||||||| ||||||||||||||||||| |   ||| ||||||       |||    
T  33025396 ggtgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaaagtt 33025495  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaa-ctcttaatcacttnnnnnnngtctagtggtattcaaaa 598  Q
    |||| ||||||||||||||||||||| |||||        ||||||||||||||||||||| |||||||||||||       |||| |||||||||||||    
T  33025496 ttgtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaa 33025595  T
Q  599 tcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaaca 698  Q
    |||||||||||| |||| ||||||||||| |||||||||||          ||| |||||||| | ||||||||||||||||||||||||||||||||||    
T  33025596 tcattcaaattttgaaggattgtttaatacatcagattttg----------tgggattttctaataaaattttagcatgaaaaagtctttcatgaaaaca 33025685  T
Q  699 tgagatttcttaggattg 716  Q
    |||||||||||| |||||    
T  33025686 tgagatttcttatgattg 33025703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 402 - 706
Target Start/End: Complemental strand, 32589268 - 32588963
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaa-tttnnnnnnngttt 500  Q
    |||||||||| ||||||||| | |||||||||| |       |||||||||||||  ||| |||||||||||||||||||||||| |||        | |    
T  32589268 tgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaaaaaaaatct 32589169  T
Q  501 tgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatc 600  Q
    | || ||||||||||||| ||||| |||||         |||||||| |||||||||| |||||| |||||||       |||| |||||||||||||||    
T  32589168 tctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaaaatc 32589069  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    |||||||||| |||| ||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||||    
T  32589068 attcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaacatg 32588969  T
Q  701 agattt 706  Q
    ||||||    
T  32588968 agattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 25612043 - 25612350
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||| ||||||||||||||||||||||| ||| ||||||       || ||    
T  25612043 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 25612142  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| | | || |||| ||       |||| ||||||||||||||||    
T  25612143 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatca 25612242  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||| ||| ||||||||||||||  |||||||||||||||||||| ||||| ||||  ||||||| || |||||||||||||||||||| ||||    
T  25612243 ttcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaagatga 25612342  T
Q  702 gatttctt 709  Q
    ||||||||    
T  25612343 gatttctt 25612350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 450 - 706
Target Start/End: Original strand, 51701514 - 51701770
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggta 549  Q
    ||||||| ||||||||||||||||||||| ||| ||||||       || ||||| ||||||||||||| ||||||||||||       |||||| ||||    
T  51701514 aaaaagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggta 51701613  T
Q  550 ttcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttg 649  Q
    ||||||||| ||| || |||| ||       |||| |||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||    
T  51701614 ttcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttg 51701713  T
Q  650 tggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagattt 706  Q
    ||| ||||| ||||| ||||||| || |||||||||||||||||||| |||||||||    
T  51701714 tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 51701770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 15835367 - 15835060
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  15835367 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 15835268  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| |||  | |||| ||        ||| ||||||||||||||||    
T  15835267 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatca 15835168  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||| | ||| ||||||||||||||  |||||||||||||||| ||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  15835167 ttcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 15835068  T
Q  702 gatttctt 709  Q
    ||||||||    
T  15835067 gatttctt 15835060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 48177731 - 48177469
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||        | ||||| ||||||||||| | ||||||||||||       |||||| |    
T  48177731 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgag 48177632  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||||| | || |||||||       |||| |||||||||||||||||||||||||||||  ||||||||||||||  ||||||||||||||    
T  48177631 gtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggatt 48177532  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  48177531 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 48177469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 393 - 603
Target Start/End: Original strand, 22183247 - 22183457
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| ||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       
T  22183247 taaggggggtgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaa 22183346  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        |||||||||||||||||||||||||||||||||||       |||||||||||||||||||| | ||||||||||||       ||||||||||||    
T  22183347 aaaagttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtat 22183446  T
Q  593 tcaaaatcatt 603  Q
    |||||||||||    
T  22183447 tcaaaatcatt 22183457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 402 - 709
Target Start/End: Complemental strand, 9322814 - 9322507
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||         |||    
T  9322814 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaaattt 9322715  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||| ||||| ||| || |||| ||       |||  ||||||||||||||||    
T  9322714 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaaatca 9322615  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    ||||||||| |||| ||||||||||||||   ||||||||||||||| ||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  9322614 ttcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 9322515  T
Q  702 gatttctt 709  Q
    ||||||||    
T  9322514 gatttctt 9322507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 405 - 708
Target Start/End: Original strand, 46327931 - 46328234
Alignment:
Q  405 attggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtg 504  Q
    ||||||| | ||||||| ||||||||||||||       || |||||||||||||||| ||||||||||| ||| ||| ||| ||       || |||||    
T  46327931 attggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaagtcttgtg 46328030  T
Q  505 ttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattc 604  Q
     ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| |||||||||||||||||||    
T  46328031 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaaatcattc 46328130  T
Q  605 aaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagat 704  Q
    ||||||||||| |||||||||| |||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||||||||||||| |||| || ||||    
T  46328131 aaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagataagat 46328230  T
Q  705 ttct 708  Q
    ||||    
T  46328231 ttct 46328234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 586 - 716
Target Start/End: Complemental strand, 31572327 - 31572197
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  31572327 gtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaagtc 31572228  T
Q  686 tttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||| ||||||||||||||| ||||    
T  31572227 tttcatgaaatcatgagatttcttagaattg 31572197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 404 - 709
Target Start/End: Complemental strand, 28387705 - 28387400
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgt 503  Q
    |||||||| | ||||||| ||||||||||||||       || ||||||||||||| |||||||||||||||||| ||| ||||||       || || |    
T  28387705 tattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaagtctttt 28387606  T
Q  504 gttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcatt 603  Q
    | ||||||||||||||||||||||||||       |||||| ||||||||||||| ||| || |||| ||        ||| |||||||||||| |||||    
T  28387605 ggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaattcatt 28387506  T
Q  604 caaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 703  Q
    |||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||  ||||||| ||  |||||||||||||| |||| ||||||    
T  28387505 caaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaagatgaga 28387406  T
Q  704 tttctt 709  Q
    ||||||    
T  28387405 tttctt 28387400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 400 - 573
Target Start/End: Original strand, 953703 - 953876
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||| ||||||       ||     
T  953703 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 953802  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcactt 573  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||| ||||| ||||||||||||||    
T  953803 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagactcttaatcactt 953876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 500 - 716
Target Start/End: Complemental strand, 37014856 - 37014640
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| |||||||| |||| ||||||||||||       |||||||||||||||||||| | |||| |||||||       |||| ||| ||||||||||    
T  37014856 ttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaaaat 37014757  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||  ||||||| ||||||   ||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||| |||||||    
T  37014756 cattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaacat 37014657  T
Q  700 gagatttcttaggattg 716  Q
    ||||||||||| |||||    
T  37014656 gagatttcttaagattg 37014640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 630
Target Start/End: Original strand, 49230772 - 49231000
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||| || ||||||||||||||       || ||||||||||| |||||||||||||||||||| ||| ||| ||       || ||    
T  49230772 tgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaaagtctt 49230871  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||||    
T  49230872 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatca 49230971  T
Q  602 ttcaaatttcgaagaattgtttaataaat 630  Q
    |||||||||||||| ||| ||||||||||    
T  49230972 ttcaaatttcgaaggattatttaataaat 49231000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 393 - 531
Target Start/End: Original strand, 14494089 - 14494224
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||       
T  14494089 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 14494185  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcattt 531  Q
        || ||||||||||||||||||||||||||||||||    
T  14494186 aaaagtcttgtgttattcaatcaagattctttgtcattt 14494224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 405 - 639
Target Start/End: Original strand, 18798380 - 18798614
Alignment:
Q  405 attggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtg 504  Q
    ||||||| | ||||||| | ||||||||||||       || ||||||| |||||||||||||||||||||||| ||| ||| ||       || |||||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  505 ttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattc 604  Q
     ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||| ||       |||| |||||||||||||||||||    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattc 18798579  T
Q  605 aaatttcgaagaattgtttaataaatcagattttg 639  Q
    ||||||||||| ||||||||||||||  |||||||    
T  18798580 aaatttcgaaggattgtttaataaattggattttg 18798614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 447 - 709
Target Start/End: Original strand, 29219219 - 29219469
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||       || ||||| ||||||||||||| |||  |||||||       |||||| |    
T  29219219 atgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgag 29219316  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
     ||||||||||| ||| || |||||||       |||| ||||||||||||||||||||||||  |||| ||||||||||||||  ||||||||||||||    
T  29219317 atattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaattaagaaggattgtttaataaattggattttgatggatt 29219416  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||          ||||| ||||||| || |||||||| ||||||||||| ||||||||||||    
T  29219417 ttg----------tagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttctt 29219469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 400 - 524
Target Start/End: Complemental strand, 19452166 - 19452042
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||| ||||||       ||     
T  19452166 ggtgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtc 19452067  T
Q  500 ttgtgttattcaatcaagattcttt 524  Q
    ||||| ||||||||||||| |||||    
T  19452066 ttgtggtattcaatcaagactcttt 19452042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 447 - 705
Target Start/End: Complemental strand, 5495365 - 5495117
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    ||||||||||| |||||||||||||||||||| ||| ||| ||       || ||||| |||||||| |||| ||||||||||||       |||||| |    
T  5495365 atgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtcttgtggtattcaattaagactctttgtcattttaaaaaagtcttgag 5495266  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    |||||||||||| ||| || |||||||       |||| |||||||||||||||||| ||||||| ||| ||| ||||||||||          ||||||    
T  5495265 gtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcatttaaatttcaaaggattatttaataaat----------tggatt 5495176  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatt 705  Q
    |||||| ||||| ||||| ||||||| || ||||||||| || ||||||| ||||||||    
T  5495175 ttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 38536305 - 38536106
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| ||| || || ||||       |||| ||||||||||||||    
T  38536305 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38536206  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||| ||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  38536205 tattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 38536116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 500 - 709
Target Start/End: Complemental strand, 38558523 - 38558324
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| ||| || || ||||       |||| ||||||||||||||    
T  38558523 ttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaaaat 38558424  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
     ||||||||||| ||| ||||||||||||||  |||||||||||||||||          ||||| ||||||| || |||||||||||||||||||| ||    
T  38558423 tattcaaatttcaaaggattgtttaataaattggattttgatggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaagat 38558334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 400 - 489
Target Start/End: Original strand, 47780503 - 47780592
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    ||||||||||||||||||||||||  |||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||    
T  47780503 ggtgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 402 - 573
Target Start/End: Complemental strand, 8141442 - 8141271
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    ||||||| || | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||| ||       |||||    
T  8141442 tgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtttt 8141343  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcactt 573  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| ||| || |||||||    
T  8141342 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatcactt 8141271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 589 - 648
Target Start/End: Original strand, 955823 - 955882
Alignment:
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  955823 gtattcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggatttt 955882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 581 - 672
Target Start/End: Original strand, 51085860 - 51085951
Alignment:
Q  581 gtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaatttta 672  Q
    |||| |||||||||||||| |||||||||| |||| ||| || |||||||  |||||||||| ||||||||||||||||| |||||||||||    
T  51085860 gtctcgtggtattcaaaataattcaaattttgaaggattattaaataaattggattttgatgaattttgtggaattttcttgtgaaatttta 51085951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 586 - 716
Target Start/End: Complemental strand, 48668905 - 48668785
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||| ||||||||||||||  ||||||||||||||          |||||||||||| ||| | ||||| ||||||| || |||||||||    
T  48668905 gtggtattcaaaattattcaaatttcgaaagattgtttaataaat----------tggattttgtgggattctgtagtgtaattttaacaagaaaaagtc 48668816  T
Q  686 tttcatgaaaacatgagatttcttaggattg 716  Q
    ||||||||||| ||||||||| || ||||||    
T  48668815 tttcatgaaaagatgagatttgttgggattg 48668785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 409 - 474
Target Start/End: Complemental strand, 31572470 - 31572405
Alignment:
Q  409 gatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 474  Q
    |||||||||||||||||||||||| |||       |||||||||||||||||||||||||| ||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaa 31572405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 589 - 639
Target Start/End: Complemental strand, 31622586 - 31622536
Alignment:
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttg 639  Q
    ||||||||||||||||||||||| ||  ||||||||||||||| |||||||    
T  31622586 gtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttg 31622536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 474
Target Start/End: Original strand, 42290732 - 42290802
Alignment:
Q  404 tattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaa 474  Q
    |||||||| | ||||||| ||||||||||||||       || ||||||||||||||||||||||||||||    
T  42290732 tattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaa 42290802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 679 - 716
Target Start/End: Original strand, 48524805 - 48524842
Alignment:
Q  679 aaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||||||||||||||||| |||||||||    
T  48524805 aaaagtctttcatgaaaacatgagatttgttaggattg 48524842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 660 - 708
Target Start/End: Original strand, 18798615 - 18798663
Alignment:
Q  660 tagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 708  Q
    ||||| ||||||| || |||||||||||||||||||| |||||||||||    
T  18798615 tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 18798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 28541388 - 28541424
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaaga 436  Q
    |||||||||||||||||||||||| ||||||||||||    
T  28541388 ggtgtattggatcatgattctaagcgattttaaaaga 28541424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 617 - 708
Target Start/End: Original strand, 38320007 - 38320098
Alignment:
Q  617 attgtttaataaatcagattttgatggattttgt-ggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttct 708  Q
    |||||||| |||||  ||||||||| |||||||| ||  |||| ||||||| ||||||||  ||||||||||||||||||| |||| ||||||    
T  38320007 attgtttactaaataggattttgatagattttgttgggtttttttagtgaa-ttttagcacaaaaaagtctttcatgaaaatatgatatttct 38320098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 38536313 - 38536281
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  38536313 aaaaagtcttgtggtattcaatcaagactcttt 38536281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Complemental strand, 38558531 - 38558499
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  38558531 aaaaagtcttgtggtattcaatcaagactcttt 38558499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 450 - 482
Target Start/End: Original strand, 47784405 - 47784437
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||||||||||    
T  47784405 aaaaagtcttgtggtattcaatcaagactcttt 47784437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 450 - 489
Target Start/End: Original strand, 47780598 - 47780637
Alignment:
Q  450 aaaaagtcttgtggtattcaatcaagactcttttcaattt 489  Q
    ||||| ||||||| ||||||||||||||||||||||||||    
T  47780598 aaaaaatcttgtgttattcaatcaagactcttttcaattt 47780637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 539 - 682
Target Start/End: Original strand, 47784410 - 47784542
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||  ||| ||       |||| |||||||||||||| ||||||| ||| ||  ||||||||||||||            
T  47784410 gtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtattcaaaattattcaaacttctaaagattgtttaataaat-------- 47784500  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaa 682  Q
      |||||||||||  |||||||||| ||||||||||||||||||    
T  47784501 --tggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 393 - 716
Target Start/End: Complemental strand, 15353 - 15033
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||       
T  15353 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15257  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||||||||||||||||||||||||||||||       ||||||| |||||||||||| ||||||||||||||       ||||||||||||    
T  15256 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 15157  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15156 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 15057  T
Q  693 aaaacatgagatttcttaggattg 716  Q
    ||||||||| ||||||||||||||    
T  15056 aaaacatgaaatttcttaggattg 15033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 190; Significance: 1e-103; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 393 - 716
Target Start/End: Complemental strand, 15996 - 15676
Alignment:
Q  393 taagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnn 492  Q
    |||||| ||||||||||||||||||||||||||   ||||||||       ||||||||||| ||||||||||||||||||||||||||| ||||||       
T  15996 taaggggggtgtattggatcatgattctaaggg---ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaa 15900  T
Q  493 nnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtat 592  Q
        || ||||||||||||||||||||||||||||||||       ||||||| |||||||||||| ||||||||||||||       ||||||||||||    
T  15899 aaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtat 15800  T
Q  593 tcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatg 692  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15799 tcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatg 15700  T
Q  693 aaaacatgagatttcttaggattg 716  Q
    ||||||||| ||||||||||||||    
T  15699 aaaacatgaaatttcttaggattg 15676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 170; Significance: 7e-91; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 400 - 713
Target Start/End: Original strand, 100102 - 100415
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtt 499  Q
    |||||||||||||||||||||||||||||||||||||       |||||||||||||||| || ||||||||||| || |||| ||||||       ||     
T  100102 ggtgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaagtc 100201  T
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||||||||||||||||||||||||||||||       ||||||||||| |||||||| ||||||||||||||       |||||||||||||||||||    
T  100202 ttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 100301  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||||||||||  |||||||||||||||||| || |||||||||||||||||||||||    
T  100302 cattcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacat 100401  T
Q  700 gagatttcttagga 713  Q
    ||||||||||||||    
T  100402 gagatttcttagga 100415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 156; Significance: 2e-82; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 449 - 715
Target Start/End: Complemental strand, 806 - 540
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggt 548  Q
    |||||||||||||||||||||||||||||||||| ||||||       || ||||||||||||||||||||||||||||||||       || |||||||    
T  806 gaaaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggt 707  T
Q  549 attcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatttt 648  Q
    |||||||||||||||||||||||||        | ||||||||||||||||||||||||||| |||| |||||||||||||||| |||||||||||||||    
T  706 attcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggatttt 607  T
Q  649 gtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggatt 715  Q
    ||||||||||||||||||||||| | |||||||||||||| | ||||||||||||||||||||||||    
T  606 gtggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttcttaggatt 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 497 - 716
Target Start/End: Original strand, 102081 - 102302
Alignment:
Q  497 gttttgtgttattcaatcaagattctttgtcatttnnnnnnng--tcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattc 594  Q
    |||||||||||||||||||||||||||||||||||       |  ||||||||||||||||||| ||||||||||||||       ||||||||||||||    
T  102081 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattc 102180  T
Q  595 aaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaa 694  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  102181 aaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaa 102280  T
Q  695 aacatgagatttcttaggattg 716  Q
    || ||||||||||||| |||||    
T  102281 aatatgagatttcttatgattg 102302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 436
Target Start/End: Original strand, 102027 - 102063
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaaga 436  Q
    |||||||| ||||||||||||||||||||||||||||    
T  102027 ggtgtattagatcatgattctaagggattttaaaaga 102063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 137; Significance: 4e-71; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 539 - 716
Target Start/End: Complemental strand, 38781 - 38605
Alignment:
Q  539 gtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagatttt 638  Q
    |||||||||||||||||||| ||||||||||||||       ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  38781 gtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa-tcagatttt 38683  T
Q  639 gatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38682 gatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 38605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 400 - 481
Target Start/End: Complemental strand, 38836 - 38755
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactctt 481  Q
    |||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||    
T  38836 ggtgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagactctt 38755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 135; Significance: 6e-70; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 500 - 716
Target Start/End: Complemental strand, 39111 - 38895
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||||||||| ||||||       ||||||||||||||||| || ||||||||||||||       |||||||| ||||||||||    
T  39111 ttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaaaat 39012  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 699  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  39011 cattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacat 38912  T
Q  700 gagatttcttaggattg 716  Q
    |||||| ||||||||||    
T  38911 gagattccttaggattg 38895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 482
Target Start/End: Complemental strand, 39169 - 39087
Alignment:
Q  400 ggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||||||||||||||||||||| |||||||||||||       ||||||||||||||||||||||||||||||||| |||||    
T  39169 ggtgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttt 39087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 108; Significance: 7e-54; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 10453 - 10760
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||||||||||||||||||||||||||| ||| ||||||       || ||    
T  10453 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtctt 10552  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||||||||       |||||| ||||||||||||| |||  | |||| ||        ||| ||||||||||||||||    
T  10553 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatca 10652  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 701  Q
    |||||||||| ||| ||||||||||||||   ||||||||||||||| ||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  10653 ttcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 10752  T
Q  702 gatttctt 709  Q
    ||||||||    
T  10753 gatttctt 10760  T

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Target: scaffold1504 (Bit Score: 101; Significance: 1e-49; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 402 - 709
Target Start/End: Original strand, 756 - 1063
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | ||||||| ||||||||||||||       || |||||||| ||||||||||||||||||||||| ||| ||| ||       || ||    
T  756 tgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 855  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnn-gtctagtggtattcaaaatc 600  Q
    ||| ||||||||||||| ||||||||||||        || || ||||||||||||| ||| || |||||||        |||| |||||||||||||||    
T  856 gtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaatc 955  T
Q  601 attcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 700  Q
    ||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||| ||||| ||||||| |  ||||||||||||||| |||| |||    
T  956 attcaaatttcgaagaattatttaataaat-agattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatg 1054  T
Q  701 agatttctt 709  Q
    |||||||||    
T  1055 agatttctt 1063  T

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Target: scaffold0110 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 447 - 709
Target Start/End: Complemental strand, 39886 - 39624
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtg 546  Q
    |||||||||||||||||||||||||||||||| ||| ||| ||       |||||||| ||||||||||||| ||||||||||||       ||||||      
T  39886 atgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaa 39787  T
Q  547 gtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
     ||||||||||| | | || |||||||       |||  |||||||||||||||||||||| ||||||| ||| ||||||||||  ||||||||||||||    
T  39786 ctattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaaggattatttaataaattggattttgatggatt 39687  T
Q  647 ttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 709  Q
    |||||| ||||| ||||| ||||||| || |||||||||||||||||||| || |||||||||    
T  39686 ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttctt 39624  T

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Target: scaffold0054 (Bit Score: 78; Significance: 6e-36; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 588 - 709
Target Start/End: Complemental strand, 37035 - 36914
Alignment:
Q  588 ggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctt 687  Q
    |||||||||||||||| ||||||||||| ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || |||||||||||    
T  37035 ggtattcaaaatcattaaaatttcgaagcattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 36936  T
Q  688 tcatgaaaacatgagatttctt 709  Q
    ||||||||| || |||||||||    
T  36935 tcatgaaaagataagatttctt 36914  T

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Target: scaffold0054; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 482
Target Start/End: Complemental strand, 37092 - 37057
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||| |||||||||||||||||||    
T  37092 atgaaaaagtcttgtgctattcaatcaagactcttt 37057  T

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Target: scaffold0651 (Bit Score: 73; Significance: 6e-33; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 401 - 531
Target Start/End: Original strand, 8654 - 8784
Alignment:
Q  401 gtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngttt 500  Q
    ||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||| ||||||||||       || |    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtct 8753  T
Q  501 tgtgttattcaatcaagattctttgtcattt 531  Q
    ||||||||| |||||||||||||||||||||    
T  8754 tgtgttatttaatcaagattctttgtcattt 8784  T

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Target: scaffold0042 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 586 - 709
Target Start/End: Complemental strand, 58206 - 58083
Alignment:
Q  586 gtggtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtc 685  Q
    |||||||||||||||||||||||||||||  ||||||||||||||  |||||||||||||||||||| ||||| ||||  ||||||| || || ||| ||    
T  58206 gtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatc 58107  T
Q  686 tttcatgaaaacatgagatttctt 709  Q
    ||||||||||| ||||||||||||    
T  58106 tttcatgaaaagatgagatttctt 58083  T

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Target: scaffold0042; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 402 - 478
Target Start/End: Complemental strand, 58348 - 58272
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagact 478  Q
    |||||||||| | ||||| | ||||||||||||||       || ||||||||||||||||||||||||||||||||    
T  58348 tgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagact 58272  T

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Target: scaffold0922 (Bit Score: 69; Significance: 1e-30; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 402 - 646
Target Start/End: Original strand, 4093 - 4337
Alignment:
Q  402 tgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttnnnnnnngtttt 501  Q
    |||||||||| | |||||||  |||||||||||||       ||  ||||||||||||||||||||||||||||||| ||| ||| ||       || ||    
T  4093 tgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaagtctt 4192  T
Q  502 gtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaatca 601  Q
    ||| ||||||||||||| ||||||| ||||       |||||| ||||||||||||| ||| || |||| ||       |||| ||||||||||||||||    
T  4193 gtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatca 4292  T
Q  602 ttcaaatttcgaagaattgtttaataaatcagattttgatggatt 646  Q
    ||||||||| |||| ||||||||||||||  ||||||||||||||    
T  4293 ttcaaattttgaaggattgtttaataaattggattttgatggatt 4337  T

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Target: scaffold0536 (Bit Score: 65; Significance: 3e-28; HSPs: 2)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 10 - 116
Target Start/End: Complemental strand, 741 - 638
Alignment:
Q  10 gaggagaggttttcgatgccatccgggaggccaacttcttgggaagggaattgaaaggtttgaacgttgaagttgttgttagatttgggaaggattttag 109  Q
    ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||   |||||||| ||||||| ||    
T  741 gaggacaggttttcaatgccgtccgggaggccaacttcttgggaagggaattgaaaggtgtgaacgttgaagttgttg---gatttgggtaggatttgag 645  T
Q  110 catttga 116  Q
    | |||||    
T  644 cgtttga 638  T

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Target: scaffold0536; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 5791 - 5730
Alignment:
Q  12 ggagaggttttcgatgccatccgggaggccaacttcttgggaagggaattgaaaggtttgaa 73  Q
    ||||||| |||||| |||||| |||||||||||||| |||||||| ||| ||| ||| ||||    
T  5791 ggagaggctttcgacgccatcagggaggccaacttcatgggaaggaaatggaacggtgtgaa 5730  T

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Target: scaffold0306 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 650
Target Start/End: Original strand, 13873 - 14023
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||    
T  13873 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 13972  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||| ||  ||||||||||||||  ||||||||||||||||||    
T  13973 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 14023  T

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Target: scaffold0306; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 13806 - 13897
Alignment:
Q  391 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  13806 gttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 13897  T

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Target: scaffold0152 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 500 - 650
Target Start/End: Complemental strand, 21454 - 21304
Alignment:
Q  500 ttgtgttattcaatcaagattctttgtcatttnnnnnnngtcttgtggtattcaatcaaaactcttaatcacttnnnnnnngtctagtggtattcaaaat 599  Q
    ||||| ||||||||||||| ||||||||||||       || ||| ||||||||||||| ||| || |||||||       |||| ||||||||||||||    
T  21454 ttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 21355  T
Q  600 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgt 650  Q
    |||||||||||| ||  ||||||||||||||  ||||||||||||||||||    
T  21354 cattcaaatttcaaaagattgtttaataaattggattttgatggattttgt 21304  T

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Target: scaffold0152; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 482
Target Start/End: Complemental strand, 21521 - 21430
Alignment:
Q  391 gttaagggaggtgtattggatcatgattctaagggattttaaaagannnnnnnatcatgaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||| | |||||||||| | ||||||| | ||||||||||||       || ||||||||||||||||||||||||||||||||||||    
T  21521 gttaagggggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactcttt 21430  T

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Target: scaffold0347 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 641 - 716
Target Start/End: Original strand, 14892 - 14967
Alignment:
Q  641 tggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaggattg 716  Q
    |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||| |||||    
T  14892 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattg 14967  T

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Target: scaffold0347; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 447 - 478
Target Start/End: Original strand, 14833 - 14864
Alignment:
Q  447 atgaaaaagtcttgtggtattcaatcaagact 478  Q
    ||||||||||||||||||||||||||||||||    
T  14833 atgaaaaagtcttgtggtattcaatcaagact 14864  T

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Target: scaffold0839 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 617 - 696
Target Start/End: Complemental strand, 3791 - 3712
Alignment:
Q  617 attgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 696  Q
    ||||||||||||||  |||||||||||||||||||| ||||| ||||| ||||||| || ||||| ||||||||| ||||    
T  3791 attgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaa 3712  T

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Target: scaffold0010 (Bit Score: 34; Significance: 0.000000001; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 233719 - 233752
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||||||||||||||||||||||||||||||||    
T  233719 gaaaaagtcttgtggtattcaatcaagactcttt 233752  T

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Target: scaffold0010; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 234567 - 234600
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    ||||||||||||||||||||||||||||||||||    
T  234567 gaaaaagtcttgtggtattcaatcaagactcttt 234600  T

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Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 449 - 482
Target Start/End: Original strand, 222551 - 222584
Alignment:
Q  449 gaaaaagtcttgtggtattcaatcaagactcttt 482  Q
    |||||||||||||||||||||||||| |||||||    
T  222551 gaaaaagtcttgtggtattcaatcaaaactcttt 222584  T

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Target: scaffold0007 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 589 - 682
Target Start/End: Original strand, 199905 - 199998
Alignment:
Q  589 gtattcaaaatcattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaa 682  Q
    ||||| |||||||||||||||| |||  | ||||||||||||   |||||||| |||||||||  ||||| |||||||| ||||| || |||||    
T  199905 gtatttaaaatcattcaaattttgaaagagtgtttaataaattgaattttgattgattttgtgagattttttagtgaaactttagtataaaaaa 199998  T

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