View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5739F-Insertion-11 (Length: 510)

Name: NF5739F-Insertion-11
Description: NF5739F
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5739F-Insertion-11
NF5739F-Insertion-11
[»] chr7 (25 HSPs)
chr7 (8-510)||(20279628-20280118)
chr7 (60-510)||(20303868-20304325)
chr7 (60-510)||(20062013-20062458)
chr7 (60-220)||(20289421-20289581)
chr7 (8-180)||(20273924-20274096)
chr7 (311-488)||(20004839-20005016)
chr7 (60-220)||(20294827-20294987)
chr7 (60-227)||(20167812-20167979)
chr7 (19-217)||(20285069-20285265)
chr7 (62-220)||(20243801-20243959)
chr7 (62-220)||(20264188-20264346)
chr7 (71-220)||(20231738-20231887)
chr7 (305-510)||(20289679-20289884)
chr7 (55-184)||(19939297-19939426)
chr7 (55-184)||(19970436-19970565)
chr7 (308-509)||(20244055-20244256)
chr7 (308-509)||(20248093-20248294)
chr7 (308-509)||(20264444-20264645)
chr7 (313-509)||(20167530-20167726)
chr7 (308-509)||(20295069-20295270)
chr7 (308-509)||(20231986-20232187)
chr7 (55-219)||(20005104-20005268)
chr7 (308-506)||(20274220-20274418)
chr7 (405-488)||(19939627-19939710)
chr7 (405-488)||(19970766-19970849)
[»] chr4 (5 HSPs)
chr4 (68-220)||(40823570-40823722)
chr4 (305-510)||(40823260-40823465)
chr4 (60-98)||(36419609-36419647)
chr4 (110-150)||(31708590-31708630)
chr4 (60-136)||(36366668-36366744)
[»] chr8 (6 HSPs)
chr8 (60-138)||(4159639-4159717)
chr8 (62-219)||(4130194-4130351)
chr8 (60-120)||(4142638-4142698)
chr8 (60-219)||(4120113-4120272)
chr8 (62-132)||(23189886-23189956)
chr8 (60-132)||(4150644-4150716)
[»] chr2 (7 HSPs)
chr2 (60-139)||(2704305-2704384)
chr2 (60-139)||(2711955-2712034)
chr2 (60-139)||(2716872-2716951)
chr2 (60-139)||(2723495-2723574)
chr2 (60-139)||(2745325-2745404)
chr2 (61-153)||(2681800-2681892)
chr2 (60-150)||(2698270-2698360)
[»] chr5 (2 HSPs)
chr5 (61-132)||(453819-453890)
chr5 (62-120)||(469788-469846)
[»] chr1 (3 HSPs)
chr1 (61-132)||(47627662-47627733)
chr1 (95-169)||(21936676-21936750)
chr1 (71-135)||(47593646-47593710)
[»] chr3 (2 HSPs)
chr3 (60-153)||(3103478-3103571)
chr3 (60-159)||(5829873-5829972)


Alignment Details
Target: chr7 (Bit Score: 370; Significance: 0; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 8 - 510
Target Start/End: Original strand, 20279628 - 20280118
Alignment:
Q  8 aaaatttttactttagtagtaataactggagaataaaattttacttgtcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcag 107  Q
    |||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||            ||||||||||||||||||||    
T  20279628 aaaacttttactttagcagtaataactggagaataaacttttacttgtcaacgcagtggctatttgtc------------aatgcaaggacttttttcag 20279715  T
Q  108 agaaatcagatgtttttagctttggtgttttggtactagagatcattagcgggagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20279716 agaaatcagatgtttttagctttggtgttttggtactagagatcgttagcgggagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgt 20279815  T
Q  208 aggatttgtaagcattaacagttcattactggctcaataatatgctattttttccttttgctgccgcaacttacaaatatttgaaatttgcttttgcttt 307  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  20279816 aggatttgtaagcattaacagttcattactggctcaataatatgctattttttccttttgctaccgcaacttacaaatatttgaaatttgcttttgcttt 20279915  T
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||  ||||||| || || ||||||||| ||||||| |    
T  20279916 tcatttaggtctggatacaatggagggaaggaaatattttatctttaatagatccagaaatatatgatcatagtcatgataagaatatttcgagatgctt 20280015  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    |||||||||||| ||||||||||||||||| ||| ||||||| ||||  |||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  20280016 acatataggactgttatgtgtacaagaatcggctgtagacaggcctaatatggctacagtaatttctatgcttaacaatgaggttgcatcacttcctcct 20280115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 218; E-Value: 1e-119
Query Start/End: Original strand, 60 - 510
Target Start/End: Original strand, 20303868 - 20304325
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||| | ||||||||| |||| ||    
T  20303868 gcagtggctatatgtctcctgaatacgcaatgcgaggacttttttcagagaaatcagatgtttttagctttggtgtattgattctagagatcgttagtgg 20303967  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagcattaacagttcattactggctcaataatatgctattttt 259  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||||  ||||||||||  |  || || ||||| |  || |||||    
T  20303968 gagaagaaactcaagcttttatgacaatgagcatgcaccgagtcttctaggatttgtaagacttaacagttcgattttgacttaataacactctcttttt 20304067  T
Q  260 t--ccttttgctgccg---caacttacaaatatttgaaatttgcttttg--cttttcatttaggtttggatacaatggagggaaggaaatattttatctt 352  Q
    |  | | ||||||| |   |||||||||||||| ||||| ||| ||||   |||||||||||||| ||||||||||||||||||| |||||| |||||||    
T  20304068 ttgcttattgctgctgatgcaacttacaaatatctgaaacttgatttttttcttttcatttaggtctggatacaatggagggaagaaaatatgttatctt 20304167  T
Q  353 taatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcatacatataggacttttatgtgtacaagaatcagctatagacagacc 452  Q
    ||||||| ||||||||||||  ||||||| ||||    ||||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||    
T  20304168 taatagatccagaaatatatgatcatagtcatcacaccaatatattgagatgcatacatataggactgttatgtgtacaagaatcagctgtagatagacc 20304267  T
Q  453 taccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcctcca 510  Q
    ||| |||||  |||||||||||||||||| |||||||| |||||  ||||||||||||    
T  20304268 tactatggcgacagtaatttctatgcttatcagtgaggatgcatttcttcctcctcca 20304325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 60 - 510
Target Start/End: Complemental strand, 20062458 - 20062013
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  |||  ||    
T  20062458 gcagtggttatatgtctcctgaatacgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttgatacttgagattcttactgg 20062359  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagcattaacagttcattactggctcaataatatgctattttt 259  Q
    |||||||||||||||||||||||||||||||    |||||| |||| |||||||||||||| || | |||| |||  |  |||||||| |  ||  ||||    
T  20062358 gagaagaaactcaagcttttatgacaatgaga---ctctgactcttttaggatttgtaagcctttatagttaattttttactcaataaca--ctcctttt 20062264  T
Q  260 tccttttgctgccgcaacttacaaatatttgaaatttgcttttgcttttcatttaggtttggatacaatggagggaaggaaatattttatctttaataga 359  Q
    |||||||||||  | || ||||  |||| |||||  ||  | ||||||| |||||||| ||| ||||||||||||||| |||||||||||| ||||||||    
T  20062263 tccttttgctgatgaaaattaccgatatatgaaacatgtgtatgctttttatttaggtatggttacaatggagggaagaaaatattttatccttaataga 20062164  T
Q  360 accagaaatatatattcatagttatcatgagaatattttgagatgcatacatataggacttttatgtgtacaagaatcagctatagacagacctaccatg 459  Q
      |||||||||||  ||||||| ||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||| ||  ||||||| ||||  |||    
T  20062163 tacagaaatatatgatcatagtcatcataagaatatttcgagatgcatacatataggactgttatgtgtacaagaatcggccgtagacaggcctaatatg 20062064  T
Q  460 gctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcctcca 510  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  20062063 gctacagtaatttctatgcttaacagtgaggttgcatcacttcctcctcca 20062013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 20289421 - 20289581
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||| ||||| ||||| ||||| |||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||    
T  20289421 gcagtggttatatatctcccgaatacgcaatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgttactagagattattagcgg 20289520  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||| ||||||||||||||    
T  20289521 gagaagaaactcaagcttttatgacaatgagcatgcactgacccttttaggatttgtaagc 20289581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 8 - 180
Target Start/End: Original strand, 20273924 - 20274096
Alignment:
Q  8 aaaatttttactttagtagtaataactggagaataaaattttacttgtcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcag 107  Q
    |||| ||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |    
T  20273924 aaaacttttactttagcagtaataactgaagaataaacttttacttgtcaacgcagtggctatatgtctcctgaatatgcaatgcaaggattattttccg 20274023  T
Q  108 agaaatcagatgtttttagctttggtgttttggtactagagatcattagcgggagaagaaactcaagctttta 180  Q
    ||||  |||||||||||||||||||||||||| | ||||||||  ||| ||||| |||||||||||| |||||    
T  20274024 agaagacagatgtttttagctttggtgttttgatcctagagattcttaccgggaaaagaaactcaagttttta 20274096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 311 - 488
Target Start/End: Complemental strand, 20005016 - 20004839
Alignment:
Q  311 tttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcataca 410  Q
    |||||| |||||| ||||||| |||||  |||||||||||||| ||||||||||||||||||  ||||||| |||||  || ||||| ||||||||||||    
T  20005016 tttaggcttggattcaatggaaggaagacaatattttatctttgatagaaccagaaatatatgatcatagtcatcataggagtatttcgagatgcataca 20004917  T
Q  411 tataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtga 488  Q
    ||||||||| |||||||||||||||||||||   |||||||| || ||||||||||| ||||||||||||||||||||    
T  20004916 tataggactgttatgtgtacaagaatcagctgcggacagaccaactatggctgcagtgatttctatgcttaacagtga 20004839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 60 - 220
Target Start/End: Original strand, 20294827 - 20294987
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| | ||||||||  ||| |||    
T  20294827 gcagtggctatatgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgttttgatgctagagattgttaccgg 20294926  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    |||||| |||||||  |||||||||  |||| || ||||||  ||| ||||||||||||||    
T  20294927 gagaaggaactcaattttttatgactttgagaattctctgacccttataggatttgtaagc 20294987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 60 - 227
Target Start/End: Complemental strand, 20167979 - 20167812
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| || |||||||  ||| |||    
T  20167979 gcagtggctatatgtctcccgagtatgcaatgcaaggactattttcagagaaatcagatgtgtttagctttggtgttttgatattagagattgttaccgg 20167880  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagcattaaca 227  Q
    |||||| |||||||| ||||| || ||||| ||||||||||| ||| | |||| ||||||| ||||||    
T  20167879 gagaaggaactcaagtttttacgaaaatgaacatgctctgagccttttgggatatgtaagccttaaca 20167812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 19 - 217
Target Start/End: Original strand, 20285069 - 20285265
Alignment:
Q  19 tttagtagtaataactggagaataaaattttacttgtcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagat 118  Q
    |||||||||||||| |  |||||||  |||||  | | || ||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||||    
T  20285069 tttagtagtaataattaaagaataattttttatattttaatgcagtggctatatgtctccggaatatgcaatgcaaggattattttcagagaaatcagat 20285168  T
Q  119 gtttttagctttggtgttttggtactagagatcattagcgggagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgta 217  Q
     ||||||| |||||||||||| ||||||||||  |||  |||||||| |||||| | ||||||||||||||||||  |||||| ||| |||||||||||    
T  20285169 ttttttagttttggtgttttgatactagagattgttactgggagaaggaactcatgtttttatgacaatgagcat--tctgagccttttaggatttgta 20285265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 20243801 - 20243959
Alignment:
Q  62 agtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcggga 161  Q
    |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||| ||| |    
T  20243801 agtggctacatgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgtattgctactagagattgttatcggaa 20243900  T
Q  162 gaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    ||||||||||||| ||||||||  ||||||||  ||| || ||| |||||| |||||||    
T  20243901 gaagaaactcaagtttttatgatgatgagcataatcttagccttttaggatatgtaagc 20243959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 62 - 220
Target Start/End: Original strand, 20264188 - 20264346
Alignment:
Q  62 agtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcggga 161  Q
    ||||| || |||||||| |||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| ||| ||||||||||  ||| |||||    
T  20264188 agtggttacatgtctcccgaatatgcaatgcaaggattattttcagagaagtcagatgtttttagctttggtgtattgctactagagattgttatcggga 20264287  T
Q  162 gaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    ||||||||||||| ||||||||  ||||||||  ||| |||||| ||||||||||||||    
T  20264288 gaagaaactcaagtttttatgatgatgagcataatcttagtcttttaggatttgtaagc 20264346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 71 - 220
Target Start/End: Original strand, 20231738 - 20231887
Alignment:
Q  71 atgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgggagaagaaact 170  Q
    ||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||| ||||||||||  ||| ||| ||||||||||    
T  20231738 atgtctcctgaatatgcaatgcaaggattattttcagagaaatcagatgtttttagctttggtgtattgctactagagattgttatcggaagaagaaact 20231837  T
Q  171 caagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    |||| ||||||||| ||| ||||  |||||| ||| |||||| |||||||    
T  20231838 caagtttttatgacgatgtgcataatctgagccttttaggatatgtaagc 20231887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 305 - 510
Target Start/End: Original strand, 20289679 - 20289884
Alignment:
Q  305 ttttcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatg 404  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||||||| ||| |  |||||||||||  || |||| | ||| || || || | || ||    
T  20289679 ttttcatctaggtttggatacaatggaaggaaggcaatattttatcttttataaatacagaaatatatgatcctagtcaccataagtatgttgtaaggtg 20289778  T
Q  405 catacatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcct 504  Q
     ||||| || |||||| | |||||||||||    ||| ||||||| ||||  ||||||||||||||||||||||||||||| |||| || || |||||||    
T  20289779 tatacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggctgcagtaatttctatgcttaacagcgaggctgaattacttcct 20289878  T
Q  505 cctcca 510  Q
    ||||||    
T  20289879 cctcca 20289884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 19939297 - 19939426
Alignment:
Q  55 tcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcatt 154  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| |||||  | || ||||| |||    
T  19939297 tcaatgcagtggttatatgtctccagaatatgcaatgcaaggactgttttctgataaatctgatgtctttagctttggagttttacttcttgagattatt 19939396  T
Q  155 agcgggagaagaaactcaagcttttatgac 184  Q
    || || |||||||| |||||||||||||||    
T  19939397 agtggaagaagaaattcaagcttttatgac 19939426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 55 - 184
Target Start/End: Original strand, 19970436 - 19970565
Alignment:
Q  55 tcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcatt 154  Q
    |||| ||||||| ||||||||||| |||||||||||||||||||| ||||| || ||||| ||||| ||||||||||| |||||  | || ||||| |||    
T  19970436 tcaatgcagtggttatatgtctccagaatatgcaatgcaaggactgttttctgataaatctgatgtctttagctttggagttttacttcttgagattatt 19970535  T
Q  155 agcgggagaagaaactcaagcttttatgac 184  Q
    || || |||||||| |||||||||||||||    
T  19970536 agtggaagaagaaattcaagcttttatgac 19970565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 20244055 - 20244256
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| |||| ||||||||| ||||  |||||||| ||| ||||||| | ||||||||||  ||||||| ||||| |  ||||||  || |||||    
T  20244055 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20244154  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    |||||||||||| || |||| |||||||   || | ||| || || || ||||||||||||||||||||||||||||||||   | ||| ||||||||||    
T  20244155 acatataggactattgtgtgcacaagaacttgccaaagataggcccactatggctgcagtaatttctatgcttaacagtgaaacttcattacttcctcct 20244254  T
Q  508 cc 509  Q
    ||    
T  20244255 cc 20244256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 20248093 - 20248294
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| |||| ||||||||| ||||  |||||||| ||| ||||||| | ||||||||||  ||||||| ||||| |  ||||||  || |||||    
T  20248093 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20248192  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    |||||||||||| || |||| |||||||   || | ||| || || || ||||||||||||||||||||||||||||||||   | ||| ||||||||||    
T  20248193 acatataggactattgtgtgcacaagaacttgccaaagataggcccactatggctgcagtaatttctatgcttaacagtgaaacttcattacttcctcct 20248292  T
Q  508 cc 509  Q
    ||    
T  20248293 cc 20248294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 20264444 - 20264645
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| |||| ||||||||| ||||  |||||||| ||| ||||||| | ||||||||||  ||||||| ||||| |  ||||||  || |||||    
T  20264444 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20264543  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    |||||| ||||| || |||| |||||||   || | ||| || ||  | ||||||||||||||||||||||||||||||||   ||||||||||||||||    
T  20264544 acatattggactattgtgtgcacaagaacttgccaaagataggcccgctatggctgcagtaatttctatgcttaacagtgaaactgcatcacttcctcct 20264643  T
Q  508 cc 509  Q
    ||    
T  20264644 cc 20264645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 313 - 509
Target Start/End: Complemental strand, 20167726 - 20167530
Alignment:
Q  313 taggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcatacata 412  Q
    ||||| |||||||||||||||||||  || ||||||||| ||||||| | || |||||||  || |||| ||||| |  ||||||  || ||||||||||    
T  20167726 taggtatggatacaatggagggaagacaacattttatctctaatagatcaaggaatatatgatcctagtcatcataattatatttcaaggtgcatacata 20167627  T
Q  413 taggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcctcc 509  Q
    ||||||| || |||| |||||||   || | ||| || ||  | ||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  20167626 taggactattgtgtgcacaagaacttgccaaagataggcccgctatggctgcagtaatttctatgcttaacagtgaaactgcatcacttcctcctcc 20167530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 20295069 - 20295270
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| |||||||| ||||  || |  |||||| ||||| ||||||| | ||||||||||  || |||| ||||| |  | |||||||| | |||    
T  20295069 tcatttaggtctggatacagtggacagatgacaatattctatctctaatagatcaagaaatatatgatcctagtaatcataattacattttgaggtacat 20295168  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    ||||||||||||||| || || ||||||   ||| | || || ||  | |||||||||||||||||||||||||||||||||| ||||| ||||||||||    
T  20295169 acatataggacttttgtgcgttcaagaacatgctgtggataggcccgctatggctgcagtaatttctatgcttaacagtgaggctgcattacttcctcct 20295268  T
Q  508 cc 509  Q
    ||    
T  20295269 cc 20295270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 308 - 509
Target Start/End: Original strand, 20231986 - 20232187
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| |||| ||||||||| ||||  |||||||| ||| ||||||| | ||||||||||  ||||||| ||||| |  ||||||  || |||||    
T  20231986 tcatttaggtatggacacaatggagtgaagacaatattttgtctctaatagatcaagaaatatatgatcatagtcatcataattatatttcaaggtgcat 20232085  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcct 507  Q
    |||||||||||| || |||| |||||||   ||   ||| || || || |||||| |||||||||||||||||||||||||   | ||| ||||||||||    
T  20232086 acatataggactattgtgtgcacaagaacgtgccggagataggcccactatggcttcagtaatttctatgcttaacagtgaaagttcattacttcctcct 20232185  T
Q  508 cc 509  Q
    ||    
T  20232186 cc 20232187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 219
Target Start/End: Complemental strand, 20005268 - 20005104
Alignment:
Q  55 tcaacgcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcatt 154  Q
    |||| ||||||| |||||| |||| || ||||||||||||||| | ||||| || |||||||| || || |||||||| |||||| || |||||||  ||    
T  20005268 tcaatgcagtggttatatggctccagagtatgcaatgcaaggagtattttcggataaatcagacgtcttcagctttggagttttgctaatagagattgtt 20005169  T
Q  155 agcgggagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaag 219  Q
    || || ||| |||||||||||||||||||  ||||  || |||||| |||  |||||||||||||    
T  20005168 agtggaagacgaaactcaagcttttatgaacatgaaaattctctgactctcttaggatttgtaag 20005104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 506
Target Start/End: Original strand, 20274220 - 20274418
Alignment:
Q  308 tcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatgcat 407  Q
    |||||||||| ||||| |||||||||||||  ||||| |||||| ||||||| | || |||| ||  || |||| ||||| |  | ||||| || | |||    
T  20274220 tcatttaggtatggatccaatggagggaagacaatatcttatctctaatagatcaaggaatagatgatcctagtcatcattattacattttaaggtacat 20274319  T
Q  408 acatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcctcc 506  Q
    ||| ||||||||| | ||||||||||||   ||| |||| || || || ||||||||||| ||||||||||| |||||||| | ||||| |||| ||||    
T  20274320 acacataggacttctgtgtgtacaagaaattgctgtagataggcccactatggctgcagtgatttctatgctgaacagtgaaggtgcattacttgctcc 20274418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 488
Target Start/End: Original strand, 19939627 - 19939710
Alignment:
Q  405 catacatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtga 488  Q
    |||||| ||||| ||| |||||||||| ||||   | |||||||||||||||||||| || |||||||||||||| ||||||||    
T  19939627 catacacatagggcttctatgtgtacaggaattttccatagacagacctaccatggcggctgtaatttctatgctgaacagtga 19939710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 405 - 488
Target Start/End: Original strand, 19970766 - 19970849
Alignment:
Q  405 catacatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtga 488  Q
    |||||| ||||| ||| |||||||||| ||||   | |||||||||||||||||||| || |||||||||||||| ||||||||    
T  19970766 catacacatagggcttctatgtgtacaggaattttccatagacagacctaccatggcggctgtaatttctatgctgaacagtga 19970849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 105; Significance: 3e-52; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 68 - 220
Target Start/End: Complemental strand, 40823722 - 40823570
Alignment:
Q  68 tatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgggagaagaa 167  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||||||||    
T  40823722 tatatgtcccctgaatatgcgatgcaaggactgttttcagagaaatcagatgtctttagctttggtgttttgatactagagattattagtgggagaagaa 40823623  T
Q  168 actcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaagc 220  Q
    ||||||| |||||||||||||||||||| ||||  ||| ||||||||||||||    
T  40823622 actcaagattttatgacaatgagcatgcactgacccttttaggatttgtaagc 40823570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 305 - 510
Target Start/End: Complemental strand, 40823465 - 40823260
Alignment:
Q  305 ttttcatttaggtttggatacaatggagggaaggaaatattttatctttaatagaaccagaaatatatattcatagttatcatgagaatattttgagatg 404  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||| | ||||||||||  || ||||   ||| || || || | || ||    
T  40823465 ttttcatgtaggtttggatacaatggagggaaggcaatattttatcttttatagatcaagaaatatatgatcctagtcgccataagtatgttgtaaggtg 40823366  T
Q  405 catacatataggacttttatgtgtacaagaatcagctatagacagacctaccatggctgcagtaatttctatgcttaacagtgaggttgcatcacttcct 504  Q
     ||||| || |||||| | |||||||||||    ||| ||||||| ||||  ||||| |||||||||||||||||||||||||||  || || |||||||    
T  40823365 tatacacattggacttctgtgtgtacaagagcttgctgtagacaggcctaatatggcagcagtaatttctatgcttaacagtgagactgaattacttcct 40823266  T
Q  505 cctcca 510  Q
    ||||||    
T  40823265 cctcca 40823260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 98
Target Start/End: Original strand, 36419609 - 36419647
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggac 98  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  36419609 gcagtggatatatgtctccggaatatgcaatgcaaggac 36419647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 150
Target Start/End: Original strand, 31708590 - 31708630
Alignment:
Q  110 aaatcagatgtttttagctttggtgttttggtactagagat 150  Q
    |||||||||||||| ||||||||||||||  ||||||||||    
T  31708590 aaatcagatgttttcagctttggtgttttactactagagat 31708630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 136
Target Start/End: Original strand, 36366668 - 36366744
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgtt 136  Q
    ||||||||||||||||||| || ||||| ||| | ||| | || |||| |||||| |||||||| || |||||||||    
T  36366668 gcagtggctatatgtctccagagtatgctatggatggaatcttctcagtgaaatctgatgttttcagttttggtgtt 36366744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 51; Significance: 5e-20; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 60 - 138
Target Start/End: Complemental strand, 4159717 - 4159639
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgtttt 138  Q
    ||||||| |||||| | ||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||| |||||    
T  4159717 gcagtggttatatgccgcctgaatatgcaatggaaggacttttttctgagaaatcagatgtttatagctttggagtttt 4159639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 62 - 219
Target Start/End: Complemental strand, 4130351 - 4130194
Alignment:
Q  62 agtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcggga 161  Q
    ||||| |||||| | |||||||||||||||   |||||||| ||||||||||||||||| | |||||||||||||||  | ||||||||  | |||||      
T  4130351 agtggttatatgccgcctgaatatgcaatggggggacttttctcagagaaatcagatgtatatagctttggtgttttattgctagagattgtaagcggac 4130252  T
Q  162 gaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaag 219  Q
    |||||||    ||||||||| | |||||| || |||| || ||||| || ||||||||    
T  4130251 gaagaaataacagcttttatcaaaatgaggattctcttagccttgttggctttgtaag 4130194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 60 - 120
Target Start/End: Complemental strand, 4142698 - 4142638
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgt 120  Q
    ||||||| |||||| | ||||||||||||||| | || ||||| |||||||||||||||||    
T  4142698 gcagtggttatatgccacctgaatatgcaatggaggggcttttctcagagaaatcagatgt 4142638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 219
Target Start/End: Complemental strand, 4120272 - 4120113
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||| |||||| | || |||||||||||| | || ||||| || |||||||||||||| | ||||||||| |||||  | ||||||||  | || ||    
T  4120272 gcagtggttatatgccgccagaatatgcaatggaggggcttttctctgagaaatcagatgtatatagctttggggttttattgctagagattgtcagtgg 4120173  T
Q  160 gagaagaaactcaagcttttatgacaatgagcatgctctgagtcttgtaggatttgtaag 219  Q
    | |||||||  | ||||||||| |||  ||| || | || || |||||||| ||||||||    
T  4120172 gcgaagaaatacgagcttttatcacagcgaggattcacttagccttgtaggctttgtaag 4120113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 23189886 - 23189956
Alignment:
Q  62 agtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttgg 132  Q
    |||||||| ||||||||||||||||| ||| |||| ||||| ||||  ||||| || || |||||||||||    
T  23189886 agtggctacatgtctcctgaatatgctatggaaggccttttctcagttaaatccgacgtctttagctttgg 23189956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 60 - 132
Target Start/End: Complemental strand, 4150716 - 4150644
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttgg 132  Q
    ||||||| |||||| | ||||||||||||||| | || ||||| || || ||||||||||| | |||||||||    
T  4150716 gcagtggttatatgccgcctgaatatgcaatggaggggcttttctctgaaaaatcagatgtctatagctttgg 4150644  T

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Target: chr2 (Bit Score: 44; Significance: 8e-16; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2704384 - 2704305
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttg 139  Q
    ||||||| ||||||||||| ||||| |||||| | ||  | |||||||||||||||||||||||||||||||| ||||||    
T  2704384 gcagtggatatatgtctccagaatacgcaatggaggggttgttttcagagaaatcagatgtttttagctttggggttttg 2704305  T

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Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2712034 - 2711955
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttg 139  Q
    ||||||| ||||||||||| |||||||||||| ||||  | |||||||||||||||||| ||||||| ||||| ||||||    
T  2712034 gcagtggatatatgtctccagaatatgcaatgaaagggttgttttcagagaaatcagatatttttagttttggagttttg 2711955  T

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Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2716951 - 2716872
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttg 139  Q
    ||||||| || |||||||| |||||||||||| ||||| | |||||||||||||||||||| ||||| ||||| ||||||    
T  2716951 gcagtggatacatgtctccggaatatgcaatggaaggattgttttcagagaaatcagatgtatttagttttggggttttg 2716872  T

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Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2723574 - 2723495
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttg 139  Q
    ||||||| || |||||||| |||||||||||| |||| || |||||||||||||||||||| ||||| ||||| ||||||    
T  2723574 gcagtggatacatgtctccggaatatgcaatggaagggctgttttcagagaaatcagatgtatttagttttggggttttg 2723495  T

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Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 60 - 139
Target Start/End: Complemental strand, 2745404 - 2745325
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttg 139  Q
    ||||||| || |||||||| |||||||||||| |||| || |||||||||||||||||||| ||||| ||||| ||||||    
T  2745404 gcagtggatacatgtctccggaatatgcaatggaagggctgttttcagagaaatcagatgtatttagttttggggttttg 2745325  T

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Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 61 - 153
Target Start/End: Complemental strand, 2681892 - 2681800
Alignment:
Q  61 cagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcat 153  Q
    ||||||||||||||||||||||||||| ||| | |||   || ||||  ||||||||||||||||||||||| ||| | || |||||||||||    
T  2681892 cagtggctatatgtctcctgaatatgctatggacggaaacttctcagttaaatcagatgtttttagctttggagttcttgtgctagagatcat 2681800  T

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Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 60 - 150
Target Start/End: Complemental strand, 2698360 - 2698270
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagat 150  Q
    ||||||| ||||||||||||||||| || ||| |||| ||  ||||||  ||||||||||| | ||| |||||||| ||  ||||||||||    
T  2698360 gcagtggttatatgtctcctgaatacgctatggaaggcctagtttcagtcaaatcagatgtatatagttttggtgtattactactagagat 2698270  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 453890 - 453819
Alignment:
Q  61 cagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttgg 132  Q
    |||||| ||||||||| | |||||||||||||| |||| || |||||| ||||||||||| |||||||||||    
T  453890 cagtggttatatgtcttccgaatatgcaatgcatggacattattcagaaaaatcagatgtgtttagctttgg 453819  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 62 - 120
Target Start/End: Complemental strand, 469846 - 469788
Alignment:
Q  62 agtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgt 120  Q
    ||||| ||||||||||| |||||||||||||| ||||  ||||| |||||||| |||||    
T  469846 agtggttatatgtctccggaatatgcaatgcacggacaattttctgagaaatccgatgt 469788  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000005; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 61 - 132
Target Start/End: Original strand, 47627662 - 47627733
Alignment:
Q  61 cagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttgg 132  Q
    |||||| || |||||||| |||||||||||||| ||||  ||||||||||| || ||||||||||| |||||    
T  47627662 cagtggttacatgtctccggaatatgcaatgcatggacaattttcagagaagtctgatgtttttagttttgg 47627733  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 169
Target Start/End: Original strand, 21936676 - 21936750
Alignment:
Q  95 ggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgggagaagaaac 169  Q
    |||| |||||||| ||| || |||||||||||||| |||||| ||||||| ||||| ||||| || | |||||||    
T  21936676 ggacatttttcagtgaagtccgatgtttttagcttcggtgttgtggtacttgagattattagtggaaaaagaaac 21936750  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 135
Target Start/End: Original strand, 47593646 - 47593710
Alignment:
Q  71 atgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgt 135  Q
    ||||| || |||||||||||||  ||||  ||||||||||| || ||||||||||| ||||||||    
T  47593646 atgtccccagaatatgcaatgcttggacacttttcagagaagtcggatgtttttagttttggtgt 47593710  T

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Target: chr3 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 60 - 153
Target Start/End: Original strand, 3103478 - 3103571
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcat 153  Q
    ||||||| |||||| |||| |||||||| ||| ||||| | |||||||  || ||||||||||| |||||||||||| |  | |||||||||||    
T  3103478 gcagtggatatatggctccagaatatgctatggaaggattgttttcagtaaagtcagatgttttcagctttggtgttcttttgctagagatcat 3103571  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 60 - 159
Target Start/End: Original strand, 5829873 - 5829972
Alignment:
Q  60 gcagtggctatatgtctcctgaatatgcaatgcaaggacttttttcagagaaatcagatgtttttagctttggtgttttggtactagagatcattagcgg 159  Q
    ||||||| |||||| |||| || |||||| |||| ||  |||| |||   ||||| ||||||||||||||||| ||| | ||||| ||||||||||||||    
T  5829873 gcagtggatatatgcctccagagtatgcagtgcatgggtttttctcaataaaatctgatgtttttagctttggagttgttgtacttgagatcattagcgg 5829972  T

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