View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5739F-Insertion-20 (Length: 145)
Name: NF5739F-Insertion-20
Description: NF5739F
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5739F-Insertion-20 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 130; Significance: 1e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 5949755 - 5949892
Alignment:
| Q |
8 |
gttcggatccagatttgttcaattggcaagtgacaggccgtaatgacgcgaaaaatcaagaggaacatgagttgttgaatggaatgtcttgtgagagtaa |
107 |
Q |
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| T |
5949755 |
gttcggatccagatttgttcaattggcaagtgacaggccgtaatgacgcgaaaaatcaagaggaacatgagttgttgaatggaatgtcttgtgagagtaa |
5949854 |
T |
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| Q |
108 |
aacacagcctgttggtgataattggtggttttatgatg |
145 |
Q |
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| T |
5949855 |
accacagtctgttggtgataattggtggttttatgatg |
5949892 |
T |
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