View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5740-Insertion-6 (Length: 283)
Name: NF5740-Insertion-6
Description: NF5740
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5740-Insertion-6 |
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Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 7 - 247
Target Start/End: Original strand, 36051399 - 36051637
Alignment:
| Q |
7 |
aaattgcacatgcttaaggagattagatgttgttttaggcttgattacaaatgatgctagtcaatatgtttaatgagtgaatcacaataagaataataac |
106 |
Q |
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| T |
36051399 |
aaattgcacatgcttaaggagatcagatgttgttttagtctcgattaaaaatgatgctagtcaatatgtttaatgagtgaatcacaataagaataataac |
36051498 |
T |
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| Q |
107 |
atgatcataaatttatatccattactggatagagtataattcatacaagtactcctgtactccataagttttctttctctttgtactactataccagtaa |
206 |
Q |
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| T |
36051499 |
atgatcataaatttatatccattactggatagagtataattcatacaagtact-ctgtactccataagttttctttctatttgtactactataccaataa |
36051597 |
T |
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| Q |
207 |
ttttttcaccagaaataaagaaaattaaataatatatcagc |
247 |
Q |
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|||||||||||||||||| | ||||||||| ||||||||| |
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| T |
36051598 |
-tttttcaccagaaataaaaacaattaaatactatatcagc |
36051637 |
T |
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