View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5741-Insertion-2 (Length: 590)

Name: NF5741-Insertion-2
Description: NF5741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5741-Insertion-2
NF5741-Insertion-2
[»] chr4 (97 HSPs)
chr4 (417-496)||(51224832-51224909)
chr4 (415-496)||(29513690-29513769)
chr4 (415-496)||(56025254-56025333)
chr4 (416-496)||(54165155-54165233)
chr4 (416-495)||(49768864-49768941)
chr4 (415-484)||(31318751-31318818)
chr4 (416-496)||(31048887-31048965)
chr4 (416-496)||(44170613-44170691)
chr4 (519-579)||(54165070-54165130)
chr4 (520-579)||(31048989-31049048)
chr4 (417-484)||(44165909-44165974)
chr4 (414-484)||(4577554-4577622)
chr4 (417-495)||(20956577-20956653)
chr4 (414-495)||(1987708-1987787)
chr4 (415-488)||(19910810-19910881)
chr4 (415-495)||(45779286-45779364)
chr4 (416-480)||(47288081-47288144)
chr4 (416-484)||(55609171-55609237)
chr4 (414-490)||(56474763-56474838)
chr4 (417-496)||(4550334-4550411)
chr4 (416-495)||(26442385-26442462)
chr4 (417-496)||(39010131-39010208)
chr4 (520-579)||(43434441-43434500)
chr4 (414-484)||(43864031-43864098)
chr4 (417-496)||(45176729-45176806)
chr4 (416-495)||(48722068-48722145)
chr4 (416-495)||(53662423-53662500)
chr4 (416-495)||(54803323-54803400)
chr4 (414-484)||(10994158-10994226)
chr4 (417-487)||(18568818-18568886)
chr4 (418-496)||(45548778-45548854)
chr4 (417-486)||(8680941-8681008)
chr4 (415-484)||(31147229-31147296)
chr4 (417-490)||(40721964-40722035)
chr4 (420-484)||(41170776-41170837)
chr4 (520-569)||(45176654-45176703)
chr4 (416-484)||(49194883-49194948)
chr4 (415-495)||(6093602-6093680)
chr4 (415-487)||(13267481-13267551)
chr4 (414-486)||(20056393-20056463)
chr4 (519-579)||(20956493-20956553)
chr4 (416-484)||(37514137-37514204)
chr4 (416-484)||(38864741-38864808)
chr4 (412-484)||(40755916-40755986)
chr4 (416-484)||(42815403-42815470)
chr4 (416-484)||(43168720-43168786)
chr4 (416-488)||(44368204-44368274)
chr4 (418-486)||(46844245-46844311)
chr4 (417-484)||(3078913-3078979)
chr4 (416-495)||(12241057-12241134)
chr4 (416-495)||(33820331-33820408)
chr4 (413-484)||(34259811-34259880)
chr4 (417-484)||(36081799-36081864)
chr4 (420-487)||(38519796-38519862)
chr4 (417-484)||(40335789-40335854)
chr4 (413-484)||(45274261-45274330)
chr4 (408-483)||(45277088-45277161)
chr4 (417-484)||(45286121-45286186)
chr4 (417-484)||(46912805-46912870)
chr4 (420-495)||(47519715-47519788)
chr4 (416-483)||(49424827-49424892)
chr4 (416-487)||(51255745-51255815)
chr4 (417-480)||(53763821-53763882)
chr4 (417-481)||(149296-149358)
chr4 (414-484)||(4514271-4514339)
chr4 (416-482)||(4915680-4915745)
chr4 (425-495)||(6239388-6239456)
chr4 (415-484)||(11493200-11493266)
chr4 (414-484)||(17363227-17363295)
chr4 (414-484)||(39344985-39345054)
chr4 (416-484)||(55595948-55596014)
chr4 (416-481)||(1562545-1562608)
chr4 (411-484)||(11064095-11064166)
chr4 (415-484)||(12638823-12638890)
chr4 (416-484)||(22893868-22893933)
chr4 (416-484)||(22945536-22945601)
chr4 (417-490)||(24045244-24045316)
chr4 (411-484)||(25523204-25523275)
chr4 (415-484)||(34116546-34116613)
chr4 (416-484)||(50890079-50890145)
chr4 (415-488)||(55268003-55268074)
chr4 (416-484)||(4896506-4896572)
chr4 (416-484)||(5208333-5208399)
chr4 (416-484)||(24235319-24235385)
chr4 (417-481)||(25139964-25140026)
chr4 (410-481)||(29531615-29531683)
chr4 (416-484)||(29577442-29577508)
chr4 (460-496)||(34363202-34363238)
chr4 (416-484)||(38338927-38338995)
chr4 (417-481)||(44250236-44250298)
chr4 (416-484)||(44257735-44257802)
chr4 (415-479)||(47998592-47998654)
chr4 (420-484)||(48743713-48743775)
chr4 (415-495)||(48791592-48791670)
chr4 (416-484)||(49584993-49585060)
chr4 (416-484)||(51389315-51389381)
chr4 (416-484)||(53583134-53583200)
[»] chr3 (75 HSPs)
chr3 (417-496)||(41877688-41877765)
chr3 (417-492)||(7949791-7949864)
chr3 (415-496)||(14992072-14992150)
chr3 (420-496)||(40478281-40478355)
chr3 (413-496)||(45295733-45295814)
chr3 (418-496)||(25542965-25543041)
chr3 (417-486)||(47056530-47056597)
chr3 (417-484)||(1834506-1834571)
chr3 (416-487)||(53932394-53932463)
chr3 (416-490)||(33256308-33256381)
chr3 (416-484)||(108430-108496)
chr3 (416-484)||(16479631-16479697)
chr3 (416-496)||(27162463-27162541)
chr3 (416-484)||(39604252-39604318)
chr3 (414-474)||(49886691-49886749)
chr3 (416-495)||(9557917-9557994)
chr3 (417-488)||(11327108-11327177)
chr3 (418-496)||(25142627-25142705)
chr3 (519-562)||(25542899-25542942)
chr3 (417-484)||(29573361-29573427)
chr3 (414-484)||(43409368-43409436)
chr3 (414-484)||(44334807-44334875)
chr3 (417-483)||(47141607-47141671)
chr3 (416-490)||(48405409-48405482)
chr3 (416-490)||(50025698-50025770)
chr3 (414-495)||(2280174-2280253)
chr3 (416-484)||(5114077-5114143)
chr3 (416-481)||(35376560-35376623)
chr3 (411-484)||(37894248-37894320)
chr3 (415-495)||(7294094-7294173)
chr3 (416-488)||(8254026-8254096)
chr3 (415-495)||(27646496-27646574)
chr3 (416-488)||(32931920-32931990)
chr3 (419-495)||(38471644-38471718)
chr3 (416-484)||(43176201-43176267)
chr3 (416-484)||(43900763-43900829)
chr3 (417-484)||(16295464-16295529)
chr3 (519-562)||(40478215-40478258)
chr3 (413-484)||(51032630-51032699)
chr3 (417-484)||(51771445-51771510)
chr3 (417-495)||(2482669-2482745)
chr3 (417-495)||(30805598-30805674)
chr3 (415-484)||(36671020-36671087)
chr3 (414-484)||(36869843-36869911)
chr3 (520-562)||(45295667-45295709)
chr3 (411-484)||(46623901-46623972)
chr3 (417-484)||(46815864-46815929)
chr3 (417-482)||(462409-462472)
chr3 (415-484)||(10811133-10811201)
chr3 (416-477)||(12792637-12792696)
chr3 (520-561)||(22813172-22813213)
chr3 (520-557)||(25142729-25142766)
chr3 (416-484)||(7220-7286)
chr3 (416-484)||(1901932-1901998)
chr3 (416-484)||(1911378-1911444)
chr3 (416-472)||(5398917-5398971)
chr3 (417-484)||(7668193-7668258)
chr3 (416-484)||(9159042-9159108)
chr3 (417-489)||(14207258-14207329)
chr3 (417-489)||(14215006-14215077)
chr3 (417-484)||(16969572-16969637)
chr3 (416-480)||(20215947-20216009)
chr3 (417-484)||(26014812-26014877)
chr3 (416-484)||(26279883-26279949)
chr3 (417-481)||(28300286-28300348)
chr3 (417-481)||(31176449-31176511)
chr3 (414-494)||(32981117-32981195)
chr3 (416-484)||(36818955-36819021)
chr3 (416-484)||(45186557-45186624)
chr3 (416-484)||(46019461-46019528)
chr3 (416-484)||(46473127-46473193)
chr3 (416-484)||(47849671-47849737)
chr3 (416-484)||(49196695-49196761)
chr3 (416-484)||(49761192-49761258)
chr3 (416-480)||(49983360-49983423)
[»] chr6 (38 HSPs)
chr6 (417-495)||(25924859-25924935)
chr6 (416-495)||(28965835-28965912)
chr6 (415-496)||(15364656-15364736)
chr6 (411-496)||(26668490-26668573)
chr6 (415-496)||(15328487-15328566)
chr6 (417-496)||(31368602-31368679)
chr6 (416-484)||(19789082-19789148)
chr6 (416-495)||(34413091-34413167)
chr6 (416-486)||(3339503-3339571)
chr6 (416-490)||(25127832-25127905)
chr6 (416-496)||(237392-237470)
chr6 (416-484)||(3821377-3821443)
chr6 (416-484)||(11785354-11785420)
chr6 (416-484)||(17417241-17417307)
chr6 (453-493)||(21210293-21210333)
chr6 (412-484)||(25554240-25554310)
chr6 (412-484)||(25995437-25995507)
chr6 (416-482)||(34976615-34976678)
chr6 (417-484)||(1376364-1376430)
chr6 (417-484)||(1384112-1384178)
chr6 (520-562)||(15328590-15328632)
chr6 (454-496)||(24881758-24881800)
chr6 (520-562)||(25924792-25924834)
chr6 (416-484)||(8645308-8645374)
chr6 (415-484)||(9954546-9954613)
chr6 (417-482)||(17835612-17835675)
chr6 (415-484)||(21506334-21506401)
chr6 (416-484)||(2242027-2242094)
chr6 (416-484)||(8778878-8778944)
chr6 (416-484)||(15722509-15722575)
chr6 (417-484)||(25811844-25811909)
chr6 (412-484)||(26094900-26094970)
chr6 (525-561)||(26668602-26668638)
chr6 (416-484)||(29383556-29383622)
chr6 (416-484)||(30796081-30796147)
chr6 (420-484)||(31934163-31934225)
chr6 (417-484)||(34047387-34047452)
chr6 (420-484)||(34570600-34570663)
[»] chr8 (59 HSPs)
chr8 (415-496)||(38504168-38504247)
chr8 (417-496)||(29509266-29509343)
chr8 (417-484)||(42786665-42786731)
chr8 (416-495)||(43587640-43587717)
chr8 (414-492)||(6105434-6105510)
chr8 (416-495)||(28156202-28156279)
chr8 (414-484)||(38675600-38675669)
chr8 (417-495)||(43602418-43602494)
chr8 (414-495)||(5742652-5742731)
chr8 (519-579)||(29509366-29509426)
chr8 (416-484)||(41304988-41305054)
chr8 (416-495)||(32674227-32674304)
chr8 (414-496)||(11089573-11089653)
chr8 (417-495)||(43873686-43873762)
chr8 (411-484)||(20473773-20473844)
chr8 (415-488)||(30927933-30928004)
chr8 (416-484)||(22836145-22836211)
chr8 (416-484)||(27630896-27630962)
chr8 (416-484)||(28473551-28473617)
chr8 (415-483)||(34970205-34970271)
chr8 (416-484)||(34996366-34996432)
chr8 (416-484)||(35818936-35819002)
chr8 (414-486)||(36064027-36064097)
chr8 (416-484)||(42716319-42716385)
chr8 (416-484)||(43715874-43715940)
chr8 (416-484)||(45101395-45101461)
chr8 (417-484)||(295545-295611)
chr8 (453-488)||(10344358-10344393)
chr8 (417-484)||(10644807-10644873)
chr8 (417-484)||(12659052-12659117)
chr8 (417-484)||(25830251-25830317)
chr8 (417-487)||(27325758-27325826)
chr8 (417-484)||(35937518-35937583)
chr8 (414-492)||(1332466-1332542)
chr8 (413-495)||(9048311-9048391)
chr8 (417-495)||(11114664-11114740)
chr8 (417-483)||(31806299-31806363)
chr8 (415-484)||(3946238-3946306)
chr8 (453-490)||(5924844-5924881)
chr8 (415-484)||(6849474-6849541)
chr8 (454-495)||(14228742-14228783)
chr8 (453-490)||(35595244-35595281)
chr8 (415-484)||(36969682-36969750)
chr8 (415-484)||(40102021-40102088)
chr8 (414-495)||(42130993-42131072)
chr8 (416-484)||(67166-67233)
chr8 (420-484)||(3893404-3893466)
chr8 (416-484)||(6004943-6005009)
chr8 (416-484)||(6440080-6440147)
chr8 (411-487)||(7129527-7129601)
chr8 (448-484)||(7777185-7777221)
chr8 (416-484)||(9738699-9738765)
chr8 (416-484)||(12045659-12045725)
chr8 (417-493)||(30943836-30943910)
chr8 (416-484)||(33100474-33100541)
chr8 (416-484)||(35067159-35067226)
chr8 (418-478)||(37663703-37663762)
chr8 (415-495)||(37784369-37784447)
chr8 (416-488)||(41293723-41293793)
[»] chr5 (56 HSPs)
chr5 (415-496)||(41192585-41192664)
chr5 (419-495)||(35972576-35972650)
chr5 (417-495)||(16553504-16553580)
chr5 (416-496)||(26685690-26685768)
chr5 (416-496)||(26955421-26955499)
chr5 (417-496)||(22920486-22920563)
chr5 (417-496)||(31006059-31006136)
chr5 (417-495)||(5382541-5382618)
chr5 (415-484)||(18695316-18695384)
chr5 (415-496)||(19271857-19271936)
chr5 (415-496)||(36548374-36548453)
chr5 (416-484)||(6758796-6758863)
chr5 (417-488)||(7077344-7077413)
chr5 (415-484)||(6940155-6940223)
chr5 (411-484)||(8920072-8920144)
chr5 (415-488)||(9594476-9594547)
chr5 (421-486)||(36786262-36786325)
chr5 (416-481)||(38500942-38501005)
chr5 (415-484)||(38730861-38730929)
chr5 (411-484)||(39191840-39191911)
chr5 (417-486)||(39788710-39788777)
chr5 (416-495)||(17990214-17990290)
chr5 (416-484)||(20985535-20985601)
chr5 (415-495)||(25585451-25585529)
chr5 (519-579)||(31006157-31006217)
chr5 (420-495)||(5380337-5380411)
chr5 (417-488)||(9599730-9599799)
chr5 (417-484)||(12661953-12662018)
chr5 (417-484)||(22098255-22098321)
chr5 (416-495)||(29765829-29765906)
chr5 (417-488)||(30574379-30574448)
chr5 (417-484)||(34381012-34381077)
chr5 (417-484)||(36416068-36416133)
chr5 (520-579)||(41192688-41192747)
chr5 (450-484)||(3674854-3674888)
chr5 (417-495)||(12779601-12779677)
chr5 (416-490)||(14914371-14914443)
chr5 (454-496)||(32379923-32379965)
chr5 (415-484)||(33037518-33037585)
chr5 (415-472)||(2050925-2050980)
chr5 (417-482)||(20125389-20125452)
chr5 (415-484)||(36713184-36713251)
chr5 (417-482)||(39595272-39595335)
chr5 (416-484)||(3031833-3031899)
chr5 (415-495)||(3771001-3771079)
chr5 (417-484)||(22649667-22649732)
chr5 (416-484)||(26660417-26660483)
chr5 (416-484)||(26932009-26932075)
chr5 (428-496)||(28501628-28501694)
chr5 (415-483)||(29807009-29807075)
chr5 (418-484)||(31025011-31025075)
chr5 (417-481)||(31708370-31708432)
chr5 (417-484)||(33243745-33243810)
chr5 (416-484)||(33743339-33743405)
chr5 (417-481)||(36581474-36581536)
chr5 (415-495)||(41383348-41383427)
[»] scaffold0172 (1 HSPs)
scaffold0172 (417-495)||(16975-17051)
[»] chr7 (59 HSPs)
chr7 (416-496)||(42060655-42060733)
chr7 (435-496)||(16645673-16645733)
chr7 (435-496)||(17620034-17620094)
chr7 (414-496)||(33881699-33881779)
chr7 (416-496)||(29609858-29609936)
chr7 (416-484)||(46829478-46829545)
chr7 (417-484)||(7295450-7295516)
chr7 (420-490)||(1789994-1790062)
chr7 (414-484)||(19426577-19426645)
chr7 (411-484)||(2790171-2790242)
chr7 (416-484)||(5378626-5378692)
chr7 (416-484)||(36108171-36108237)
chr7 (420-495)||(640395-640468)
chr7 (417-496)||(20406541-20406618)
chr7 (416-495)||(28548216-28548293)
chr7 (417-488)||(33050183-33050252)
chr7 (416-495)||(48522155-48522232)
chr7 (417-495)||(37969931-37970007)
chr7 (417-495)||(41458895-41458971)
chr7 (414-484)||(43079638-43079706)
chr7 (418-495)||(35212950-35213025)
chr7 (420-484)||(6269369-6269432)
chr7 (416-484)||(41538481-41538547)
chr7 (416-495)||(155976-156054)
chr7 (417-495)||(3341699-3341775)
chr7 (416-487)||(12007188-12007258)
chr7 (417-484)||(28081788-28081853)
chr7 (417-484)||(30538626-30538691)
chr7 (414-481)||(30941175-30941240)
chr7 (417-484)||(33212042-33212107)
chr7 (417-479)||(42476556-42476616)
chr7 (416-495)||(44511138-44511215)
chr7 (417-484)||(47944982-47945048)
chr7 (417-484)||(47950412-47950478)
chr7 (417-487)||(2347062-2347130)
chr7 (417-495)||(3344856-3344932)
chr7 (426-496)||(8326134-8326202)
chr7 (416-484)||(9055266-9055332)
chr7 (415-484)||(13152591-13152658)
chr7 (418-484)||(34349033-34349097)
chr7 (417-490)||(11789691-11789762)
chr7 (416-481)||(15564910-15564974)
chr7 (415-484)||(37899218-37899286)
chr7 (416-481)||(42276090-42276153)
chr7 (415-484)||(42584800-42584868)
chr7 (418-495)||(44496797-44496873)
chr7 (424-484)||(1471296-1471355)
chr7 (416-484)||(4971289-4971355)
chr7 (448-484)||(5174557-5174593)
chr7 (415-495)||(11070226-11070304)
chr7 (416-488)||(30864419-30864489)
chr7 (417-484)||(30941386-30941451)
chr7 (416-484)||(31398123-31398189)
chr7 (416-484)||(38023430-38023496)
chr7 (416-484)||(44184564-44184631)
chr7 (420-484)||(45335865-45335927)
chr7 (416-484)||(47448825-47448892)
chr7 (420-484)||(47644708-47644770)
chr7 (416-484)||(48639389-48639455)
[»] chr1 (68 HSPs)
chr1 (420-496)||(2257688-2257762)
chr1 (416-495)||(21433395-21433473)
chr1 (416-495)||(43196084-43196161)
chr1 (415-496)||(27563482-27563561)
chr1 (416-484)||(39815345-39815411)
chr1 (416-492)||(49189206-49189280)
chr1 (416-484)||(49596234-49596300)
chr1 (413-484)||(36690578-36690647)
chr1 (413-484)||(36706679-36706748)
chr1 (416-486)||(7203848-7203916)
chr1 (414-496)||(26501292-26501372)
chr1 (421-486)||(43056720-43056783)
chr1 (415-484)||(44641909-44641976)
chr1 (415-488)||(51193133-51193204)
chr1 (416-484)||(44112453-44112519)
chr1 (520-579)||(2257605-2257664)
chr1 (417-480)||(3919300-3919361)
chr1 (413-484)||(22674708-22674777)
chr1 (411-484)||(27810253-27810324)
chr1 (411-490)||(31427957-31428034)
chr1 (417-496)||(37669398-37669475)
chr1 (420-495)||(47113277-47113350)
chr1 (414-484)||(1689388-1689457)
chr1 (415-493)||(43457816-43457892)
chr1 (416-486)||(50777427-50777495)
chr1 (417-481)||(22331366-22331427)
chr1 (416-484)||(33100807-33100873)
chr1 (415-496)||(39669804-39669883)
chr1 (417-490)||(49699752-49699823)
chr1 (417-482)||(51250283-51250346)
chr1 (416-484)||(1100216-1100282)
chr1 (416-487)||(8350199-8350268)
chr1 (420-484)||(15059642-15059705)
chr1 (411-495)||(20288334-20288417)
chr1 (416-484)||(27352629-27352695)
chr1 (416-484)||(30535990-30536057)
chr1 (416-488)||(42256459-42256529)
chr1 (417-484)||(649768-649834)
chr1 (415-490)||(9566960-9567034)
chr1 (416-495)||(11038261-11038338)
chr1 (520-579)||(29362603-29362662)
chr1 (413-484)||(34941926-34941995)
chr1 (417-484)||(46281436-46281502)
chr1 (416-487)||(48983670-48983740)
chr1 (417-484)||(49621363-49621428)
chr1 (416-490)||(11812386-11812458)
chr1 (418-484)||(18959005-18959069)
chr1 (416-484)||(30439249-30439315)
chr1 (418-484)||(36231712-36231776)
chr1 (415-481)||(50017432-50017496)
chr1 (417-486)||(5959388-5959455)
chr1 (417-490)||(9445108-9445179)
chr1 (426-495)||(11897183-11897250)
chr1 (415-484)||(12999828-12999895)
chr1 (415-484)||(18541057-18541124)
chr1 (415-484)||(30530580-30530647)
chr1 (416-481)||(30973551-30973615)
chr1 (411-484)||(49446803-49446875)
chr1 (416-484)||(11097890-11097956)
chr1 (416-484)||(11947794-11947861)
chr1 (416-484)||(18610772-18610838)
chr1 (417-484)||(23645411-23645476)
chr1 (412-484)||(31436815-31436885)
chr1 (415-479)||(31826948-31827011)
chr1 (417-484)||(37685331-37685396)
chr1 (417-484)||(37700122-37700187)
chr1 (413-484)||(44519157-44519226)
chr1 (416-480)||(50226889-50226951)
[»] scaffold0576 (1 HSPs)
scaffold0576 (415-496)||(9427-9507)
[»] scaffold0119 (2 HSPs)
scaffold0119 (411-496)||(2220-2303)
scaffold0119 (525-561)||(2155-2191)
[»] chr2 (63 HSPs)
chr2 (415-496)||(27540013-27540092)
chr2 (415-496)||(44484650-44484729)
chr2 (416-495)||(6851654-6851731)
chr2 (416-496)||(1298193-1298271)
chr2 (418-496)||(33030096-33030173)
chr2 (413-487)||(36909846-36909918)
chr2 (418-495)||(34373006-34373081)
chr2 (416-484)||(5031922-5031989)
chr2 (416-484)||(7497997-7498063)
chr2 (416-488)||(34144553-34144623)
chr2 (416-488)||(35171228-35171298)
chr2 (411-495)||(38021350-38021432)
chr2 (416-479)||(30413737-30413798)
chr2 (416-495)||(40721770-40721847)
chr2 (417-495)||(6328667-6328743)
chr2 (521-579)||(6851570-6851628)
chr2 (415-481)||(11442670-11442734)
chr2 (417-495)||(25094352-25094428)
chr2 (417-486)||(9695065-9695132)
chr2 (415-496)||(36383460-36383539)
chr2 (412-484)||(546391-546461)
chr2 (416-484)||(1889146-1889212)
chr2 (418-490)||(7502427-7502498)
chr2 (417-484)||(9990691-9990756)
chr2 (416-484)||(15283256-15283322)
chr2 (417-484)||(22888827-22888892)
chr2 (416-484)||(30339992-30340058)
chr2 (417-487)||(33857217-33857285)
chr2 (416-488)||(42141596-42141666)
chr2 (460-496)||(45372517-45372553)
chr2 (519-562)||(12175256-12175299)
chr2 (425-496)||(12175322-12175391)
chr2 (415-490)||(14499023-14499097)
chr2 (417-484)||(25881544-25881610)
chr2 (417-484)||(31635816-31635881)
chr2 (417-484)||(32688550-32688615)
chr2 (417-484)||(36587474-36587539)
chr2 (417-495)||(11728116-11728192)
chr2 (416-484)||(13466081-13466147)
chr2 (417-495)||(13850179-13850255)
chr2 (416-484)||(14797656-14797722)
chr2 (415-484)||(18254215-18254282)
chr2 (416-486)||(29168724-29168792)
chr2 (454-488)||(29893645-29893679)
chr2 (416-484)||(5167746-5167814)
chr2 (416-481)||(6336251-6336315)
chr2 (417-484)||(9760017-9760083)
chr2 (416-485)||(9979095-9979163)
chr2 (417-482)||(12784406-12784470)
chr2 (418-490)||(17826052-17826122)
chr2 (415-496)||(30192345-30192424)
chr2 (417-482)||(34249580-34249643)
chr2 (415-484)||(43057062-43057130)
chr2 (416-484)||(6666019-6666085)
chr2 (448-484)||(6895925-6895961)
chr2 (414-482)||(14871637-14871704)
chr2 (416-484)||(27529528-27529594)
chr2 (416-484)||(32749997-32750063)
chr2 (448-484)||(34431832-34431868)
chr2 (417-457)||(35792660-35792699)
chr2 (420-484)||(35965578-35965640)
chr2 (416-484)||(36132973-36133039)
chr2 (416-484)||(42665818-42665884)
[»] scaffold0651 (1 HSPs)
scaffold0651 (415-484)||(4852-4919)
[»] scaffold0014 (2 HSPs)
scaffold0014 (416-484)||(199265-199331)
scaffold0014 (414-484)||(145058-145126)
[»] scaffold0504 (1 HSPs)
scaffold0504 (414-484)||(10741-10809)
[»] scaffold0111 (1 HSPs)
scaffold0111 (409-495)||(36861-36945)
[»] scaffold0204 (1 HSPs)
scaffold0204 (416-484)||(27338-27404)
[»] scaffold0020 (1 HSPs)
scaffold0020 (417-484)||(155906-155971)
[»] scaffold0019 (1 HSPs)
scaffold0019 (415-486)||(72364-72433)
[»] scaffold0522 (1 HSPs)
scaffold0522 (453-486)||(2508-2541)
[»] scaffold0085 (1 HSPs)
scaffold0085 (420-496)||(31294-31366)
[»] scaffold0053 (1 HSPs)
scaffold0053 (416-481)||(12496-12560)
[»] scaffold0011 (1 HSPs)
scaffold0011 (416-484)||(219670-219736)


Alignment Details
Target: chr4 (Bit Score: 56; Significance: 6e-23; HSPs: 97)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 417 - 496
Target Start/End: Complemental strand, 51224909 - 51224832
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  51224909 gagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatgttattatc 51224832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 496
Target Start/End: Complemental strand, 29513769 - 29513690
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||    
T  29513769 tagagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatgttgttatc 29513690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 56025254 - 56025333
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||||||||||||||| |||||    
T  56025254 tagagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatgttgttatc 56025333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 54165233 - 54165155
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||| ||||||||||||||||||||||    
T  54165233 agagaaatgatatttgtacaacc-attttactacaattttttg-acaactttttctctcatactcacatgatgttattatc 54165155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 49768941 - 49768864
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| || ||||||| ||||||||||| |||||||||||||| |||||||||| ||||| ||||    
T  49768941 agagaaatgatatttgtacatcc-attttgcaacaattttttg-acaactttctctctcatactcacattatgtttttat 49768864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 31318751 - 31318818
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||| ||||||||||    
T  31318751 tagagaaatgatatttgtacaa-ccattttggtacaa-tttttgtacaactttctctctcatactcacat 31318818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 31048887 - 31048965
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||| |||| | |||||||| ||| |||||| |||||||||||||| ||||||||||||| ||||||||    
T  31048887 agagaaatgatatttgcacaatc-attttgctgcaactttttg-acaactttctctctcatactcacatgatattattatc 31048965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 44170691 - 44170613
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| |||||| || ||||||||| |||||||||||||  ||||| | ||||||||||||||    
T  44170691 agagaaatgatatttgtacaacc-attttgttataattttttg-acaactttctctcacatacttatatgatgttattatc 44170613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 519 - 579
Target Start/End: Complemental strand, 54165130 - 54165070
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||| ||||||| ||||||    
T  54165130 tcattgtttttgaccaatcaaaagagaggaaaacaaagttgtcattaaatggatgtacaaa 54165070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 520 - 579
Target Start/End: Original strand, 31048989 - 31049048
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||||||||||||||| ||||||||| ||| ||||||||||||| ||||||| ||||||    
T  31048989 cattgtttttgatcaatcaaaagagagaaaaacaaagttgtcattaaatggatgtacaaa 31049048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 44165909 - 44165974
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| | ||||| ||||||||||| |||||||||||||| ||||||||||    
T  44165909 gagaaatgatatttgtacaacc-actttgcgacaattttttg-acaactttctctctcatactcacat 44165974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 4577554 - 4577622
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||||| ||||||||||    
T  4577554 atagagaaatgatatttgtacaa-ccattttcgtacaa-tttttgtacaactttctctctcatactcacat 4577622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 20956653 - 20956577
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||| |||||||||||||| ||||| ||||||||||||| | |||||||||||| ||  |||||||||||||||||    
T  20956653 gagaaataatatttgtacaacc-attttactacaattttttg-ataactttctctctcatgttcacatgatgttattat 20956577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 1987787 - 1987708
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||||| | |||||||| ||||| ||||    
T  1987787 atagagaaatgatatttgtacaa-ccattttagtacaa-tttttgtacaactttctctctcacactcacattatgtttttat 1987708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 19910810 - 19910881
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||| | ||||||| |||||  ||||||||| ||||||||||||||||| ||||||||||||||    
T  19910810 tagagaaatgatatatttacaacc-atttttttacaatttt-tggacaactttctctctcatactcacatgatg 19910881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 45779364 - 45779286
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||| ||||||  |||||| || ||||||||| |||||||||| ||| ||||||| |||||||||||||    
T  45779364 tagagaaatgatatttatacaact-attttgttataattttttg-acaactttctttctcatactcatatgatgttattat 45779286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 47288081 - 47288144
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    ||||||||||||||||||||| ||||||||  |||||||||  ||||||||||||||| ||||||    
T  47288081 agagaaatgatatttgtacaa-ccattttgtaacaatttttgtgacaactttctctctcatactc 47288144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 55609237 - 55609171
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||| ||||| ||||  ||||||||||||||| ||||||||||    
T  55609237 agagaaatgatatttgtacaa-ccattttg-tacaacttttgtgacaactttctctctcatactcacat 55609171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 490
Target Start/End: Complemental strand, 56474838 - 56474763
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||| |||| | |||||  ||||||||||  ||||| |||||||||||||||||||| |||||    
T  56474838 atagagaaatgatatttgaacaatc-atttttttacaatttttgtgacaattttctctcttatactcacattatgtt 56474763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 4550334 - 4550411
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||| | |||||||||||| |||||  |||||||||||||  ||||| | ||||||||||||||    
T  4550334 gagaaatgatatttgtacaatc-attttgctacaacttttta-acaactttctctcccatacttatatgatgttattatc 4550411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 26442462 - 26442385
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| |||||||| |||||  ||||| ||||||||||| || |||||||||| ||||| ||||    
T  26442462 agagaaatgatatttgtacaa-ccattttggtacaa-cttttgcacaactttctcactcatactcacattatgtttttat 26442385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 496
Target Start/End: Complemental strand, 39010208 - 39010131
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||| ||||||||  |||| ||||| |||| |||||||||| ||||||| |||||||| |||||    
T  39010208 gagaaatgatatttgtacaa-ccattttgtgacaacttttt-gacagctttctctctcatactcaaatgatgttcttatc 39010131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 520 - 579
Target Start/End: Original strand, 43434441 - 43434500
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    |||||||||||| |||| |||||| |||||| ||||||||||||| ||||||| ||||||    
T  43434441 cattgtttttgaccaatcaaaagataggaaaacaaagttgtcattaaatggatgtacaaa 43434500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 43864031 - 43864098
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||||| ||||||||||  ||||||||| ||||| ||||||||||    
T  43864031 atagagaaatgatatttgtacaa-ctattttggtacaattttt--gacaactttttctctcatactcacat 43864098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 496
Target Start/End: Complemental strand, 45176806 - 45176729
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||   |||||| |||||||||||  | |||||||||| | ||||||||||||||||||||||    
T  45176806 gagaaatgatatttgtacaatt-attttgttacaatttttta-ataactttctctttcatactcacatgatgttattatc 45176729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 48722068 - 48722145
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||| | ||||||||| |||| ||||| ||||| ||||||||| |||||||||| ||||| ||||    
T  48722068 agagaaatgatatttgtac-atccattttgcaacaacttttt-gacaattttctctctcatactcacattatgtttttat 48722145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 53662500 - 53662423
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  ||||||  ||||||||| | |||||||||||||| ||| |||||||||||| ||||    
T  53662500 agagaaatgatatttgtacaact-attttgtaacaattttt-gtacaactttctctctcatattcacatgatgttcttat 53662423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 54803400 - 54803323
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  |||||| | |||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  54803400 agagaaatgatatttgtacaact-attttggtgcaattttt-gtacaactttctctctcatactcacattatgttcttat 54803323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 10994226 - 10994158
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||||||  ||||| |||| ||||||||| ||||| ||||||||||    
T  10994226 atagagaaatgatatttgtacaa-ccattttgtgacaatctttt-gacaactttatctctcatactcacat 10994158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 18568886 - 18568818
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||| ||||||| ||||||  |||| |||| |||||||||| |||||||||||||||||||    
T  18568886 gagaaatgatatttatacaacc-attttgtgacaactttt-ggacaactttttctcttatactcacatgat 18568818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 418 - 496
Target Start/End: Complemental strand, 45548854 - 45548778
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||| ||||||  | ||||||||| |||||||| ||| | ||||||||||||||| ||||||    
T  45548854 agaaatgatatttgtacaacc-attttgtgataattttttg-acaactttttctttcatactcacatgatgtcattatc 45548778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 8680941 - 8681008
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||||||| ||| ||  | | |||||||||||||||||||||| ||||||||||||    
T  8680941 gagaaatgatatttgtacaacc-attatgtgata-ttttttggacaactttctctctcatactcacatga 8681008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 31147229 - 31147296
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||| |||  ||||||||||| ||||||||||||||| ||| ||||||    
T  31147229 tagagaaatgatatttgtacaa-ccactttattacaatttttt-gacaactttctctctcataatcacat 31147296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 490
Target Start/End: Complemental strand, 40722035 - 40721964
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||| | |||||||  ||  | ||||||||||||||||||||| ||||||||||||||||    
T  40722035 gagaaatgatatttgtac-atccatttt-ataataatttttggacaactttctctctcatactcacatgatgtt 40721964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 41170776 - 41170837
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||||| ||||| ||||  ||||||||||||||| ||||||||||    
T  41170776 aaatgatatttgtacaacc-attttggtacaactttt--gacaactttctctctcatactcacat 41170837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 520 - 569
Target Start/End: Complemental strand, 45176703 - 45176654
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatg 569  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||| ||||    
T  45176703 cattgtttttgaccaatcaaaagagaggaaaacaaagttgtcattaaatg 45176654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 49194883 - 49194948
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  || ||  ||||| ||||| |||||||||||||||||||||||||    
T  49194883 agagaaatgatatttgtacaaccatttatg--acaatcttttg-acaactttctctcttatactcacat 49194948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 6093680 - 6093602
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||| |||| |||||  |||||||||| | |||||||||||||| ||||| |||| ||||| ||||    
T  6093680 tagagaaatgatatttgtagaacc-attttaatacaattttt-gtacaactttctctctcatacttacattatgtttttat 6093602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 487
Target Start/End: Complemental strand, 13267551 - 13267481
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||||||||| ||||||||  ||||  ||||||| |||||||||||  |||||||||||||    
T  13267551 tagagaaatgatatttgtacaa-ccattttgtgacaa-attttggaaaactttctctcacatactcacatgat 13267481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 20056393 - 20056463
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||||||||| | ||| || || || ||||||||||||||||||||| ||| ||||||||    
T  20056393 atagagaaatgatatttgtacaa-ctattatgttataa-tttttggacaactttctctctcatagtcacatga 20056463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 579
Target Start/End: Complemental strand, 20956553 - 20956493
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||||||||||| |||| ||||||||| ||| ||||||||||||| ||| ||| ||||||    
T  20956553 tcattgtttttgaccaatcaaaagagagaaaaacaaagttgtcattaaatagatgtacaaa 20956493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 37514204 - 37514137
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| || ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  37514204 agagaaatgatatttgtacatcc-attttgtaacaacttttgtgacaactttctctctcatactcacat 37514137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 38864808 - 38864741
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||   ||||||  |||| ||||| ||||||||||||||| ||||||||||    
T  38864808 agagaaatgatatttgtacaatt-attttgtgacaacttttttgacaactttctctctcatactcacat 38864741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 40755916 - 40755986
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||||| |||||||   |||||||||| || || ||||||||| ||||||||||    
T  40755916 ttatagagaaatgatatttgtacaa-ccattttctaacaatttttt-gataattttctctctcatactcacat 40755986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 42815403 - 42815470
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  42815403 agagaaatgatatttgtacaa-ctattttgtaacaacttttgtgacaactttctctctcatactcacat 42815470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 43168786 - 43168720
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  |||||||||| | ||||||||||| | ||||||||||    
T  43168786 agagaaatgatatttgtacaa-ccattttgtgacaatttttttg-caactttctctatcatactcacat 43168720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 44368274 - 44368204
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||| | |||| |  |||| |||| | |||||||||||||||||||||||||||||    
T  44368274 agagaaatgatatttgtacaatcaattt-gtgacaactttt-gtacaactttctctcttatactcacatgatg 44368204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 486
Target Start/End: Complemental strand, 46844311 - 46844245
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||| ||||||||  ||||||  ||||||||||| |||||||||||||| ||||||||||||    
T  46844311 agaaatgatatctgtacaact-attttgtaacaattttttg-acaactttctctctcatactcacatga 46844245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 3078979 - 3078913
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| | ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  3078979 gagaaatgatatttgtacaatc-attttgtaacaacttttgtgacaactttctctctcatactcacat 3078913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 12241057 - 12241134
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  |||||   |||| |||||| |||||||||||||| |||||||||| ||||| ||||    
T  12241057 agagaaatgatatttgtacaact-attttctaacaactttttg-acaactttctctctcatactcacattatgtttttat 12241134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 33820408 - 33820331
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  |||||   |||| |||||| |||||||||||||| |||||||||| ||||| ||||    
T  33820408 agagaaatgatatttgtacaact-attttctaacaactttttg-acaactttctctctcatactcacattatgtttttat 33820331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 34259811 - 34259880
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||| ||||||||  ||||  | ||| |||||||||||||| ||||||||||    
T  34259811 tatagagaaatgatatttgtacaa-ccattttgtgacaa-ctgttgaacaactttctctctcatactcacat 34259880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 36081799 - 36081864
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||| ||| | || |||||||||||| |||| |||||||||||||||| ||||||||||    
T  36081799 gagaaatgatattcgtatagcc-attttgctacaactttt-ggacaactttctctctcatactcacat 36081864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 487
Target Start/End: Original strand, 38519796 - 38519862
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||| |||||| |||||   |||||||||  ||||||||||||||| |||||||||||||    
T  38519796 aaatgatatttgaacaacc-attttttgacaatttttgtgacaactttctctctcatactcacatgat 38519862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 40335789 - 40335854
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||  ||||||  ||||||||||| ||||||||||||||| || |||||||    
T  40335789 gagaaatgatatttgtacaa-tcattttattacaatttttt-gacaactttctctctcatgctcacat 40335854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 45274261 - 45274330
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||| |||||||||||||| || ||  ||||| |||||| |||||||||||||| ||||||||||    
T  45274261 tatagagaaattatatttgtacaacc-atattattacaactttttg-acaactttctctctcatactcacat 45274330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 483
Target Start/End: Complemental strand, 45277161 - 45277088
Alignment:
Q  408 atgtttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    ||||||||||||||||||||||||||||| ||| |||   |||| |||||  |||||||||||||| |||||||||    
T  45277161 atgtttatagagaaatgatatttgtacaa-ccactttctcacaacttttt-tacaactttctctctcatactcaca 45277088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 45286186 - 45286121
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||| |||| |||  | |||||||||||||| ||||||||||    
T  45286186 gagaaatgatatttgtacaacc-attttgcaacaactttcag-acaactttctctctcatactcacat 45286121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 46912870 - 46912805
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| ||| |||  |||||||||||  |||||||||||||| ||||||||||    
T  46912870 gagaaatgatatttgtacaa-ccactttattacaatttttt-aacaactttctctctcatactcacat 46912805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 495
Target Start/End: Complemental strand, 47519788 - 47519715
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||| || ||||||  |||| |||| | |||||||||||||| |||||||||||||||| ||||    
T  47519788 aaatgatatttgtacatcc-attttgtaacaactttt-gaacaactttctctctcatactcacatgatgttgttat 47519715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 483
Target Start/End: Complemental strand, 49424892 - 49424827
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    ||||||||||||||||||||| || |||||  |||| ||||| ||||||||||||||| |||||||||    
T  49424892 agagaaatgatatttgtacaa-cctttttgtaacaacttttt-gacaactttctctctcatactcaca 49424827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Original strand, 51255745 - 51255815
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| |||||||||||||    
T  51255745 agagaaatgatatttgaacaacc-attttttgacaacttttgtgacaactttctctctcatactcacatgat 51255815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 53763882 - 53763821
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    ||||||| |||||||||||| | |||||||||||| |||| |||||||||||||||| ||||||    
T  53763882 gagaaattatatttgtacaatc-attttgctacaactttt-ggacaactttctctctcatactc 53763821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 149358 - 149296
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||||| ||||  || |||||||||| ||||||||||||||| |||||||    
T  149358 gagaaatgatatttgtacaaccaattt--ctaacaatttttt-gacaactttctctctcatactca 149296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 4514339 - 4514271
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||| |||||| ||||||| ||||   |||||||||||| |||||||||||||| ||||||||||    
T  4514339 atagagaaataatatttatacaacc-atttcattacaattttttg-acaactttctctctcatactcacat 4514271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 482
Target Start/End: Complemental strand, 4915745 - 4915680
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||| ||| || ||||||  |||||||||  ||||||||||||||| ||||||||    
T  4915745 agagaaatgatatttgaacatcc-attttgtgacaatttttatgacaactttctctctcatactcac 4915680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 495
Target Start/End: Original strand, 6239388 - 6239456
Alignment:
Q  425 atatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||| ||||||| | ||||||||| |||||||||||||| ||| |||||| ||||| ||||    
T  6239388 atatttgtacaacc-attttgcaataattttttg-acaactttctctctcatattcacatcatgtttttat 6239456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 11493266 - 11493200
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||| |||||||||||||||| |||||||| ||||||||||  || |||||||||||| ||||| ||||    
T  11493266 tagaggaatgatatttgtacaa-ccattttgatacaattttt--gataactttctctctcatactaacat 11493200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 17363227 - 17363295
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  || |||  ||||| ||||| ||||||||||||||| ||||||||||    
T  17363227 atagagaaatgatatttgtacaa-tcactttattacaacttttt-gacaactttctctctcatactcacat 17363295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 39345054 - 39344985
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||| ||| || ||||||  |||||||||   |||||||||||||| ||||||||||    
T  39345054 atagagaaatgatatttgaacatcc-attttgtgacaatttttgcaacaactttctctctcatactcacat 39344985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 55595948 - 55596014
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||  || |||| ||||| ||||||||||||||| ||||||||||    
T  55595948 agagaaatgatatttgtacaaccaattt--ctaacaacttttt-gacaactttctctctcatactcacat 55596014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 1562608 - 1562545
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| |||||||   |||| ||||| ||||||||||||||| |||||||    
T  1562608 agagaaatgatatttgtacaa-ccattttctaacaacttttt-gacaactttctctctcatactca 1562545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 11064166 - 11064095
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||| |||||||||||||||||||| ||| ||||  |||| ||||| |||||| |||||||| ||||||||||    
T  11064166 tttatcgagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaacattctctctcatactcacat 11064095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 12638823 - 12638890
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| | | ||||  |||| ||||| ||||||||||||||| ||||||||||    
T  12638823 tagagaaatgatatttgtacaa-ctactttgtaacaa-tttttagacaactttctctctcatactcacat 12638890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 22893868 - 22893933
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  ||||||  |||||||||||  |||||||||||| | ||||||||||    
T  22893868 agagaaatgatatttgtacaa-tcatttttgtacaatttttt--acaactttctctttcatactcacat 22893933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 22945536 - 22945601
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  ||||||  |||||||||||  |||||||||||| | ||||||||||    
T  22945536 agagaaatgatatttgtacaa-tcatttttgtacaatttttt--acaactttctctttcatactcacat 22945601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 490
Target Start/End: Original strand, 24045244 - 24045316
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||| |||||| |||||  ||||| ||||  |||||| |||||||| |||||||||| |||||    
T  24045244 gagaaatgatatttgcacaaccaatttt-ttacaacttttgcgacaaccttctctctcatactcacattatgtt 24045316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 25523275 - 25523204
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||| |||||||||||||||||||||  |||||   |||| |||||| |||||||||||||| ||||||||||    
T  25523275 tttattgagaaatgatatttgtacaact-attttctcacaactttttg-acaactttctctctcatactcacat 25523204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 34116613 - 34116546
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||| ||||  |||| ||||| ||||| ||||||||| ||||||||||    
T  34116613 tagagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaattttctctctcatactcacat 34116546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 50890145 - 50890079
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||   |||||  |||| ||||  ||||||||||||||| ||||||||||    
T  50890145 agagaaatgatatttgtacaactatttttg--acaacttttgtgacaactttctctctcatactcacat 50890079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 488
Target Start/End: Complemental strand, 55268074 - 55268003
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||||| |||| |  |||| |||| | |||||||| ||||| ||||||||||||||    
T  55268074 tagagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttatctctcatactcacatgatg 55268003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 4896572 - 4896506
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||  ||||||||||    
T  4896572 agagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaactttctctcgcatactcacat 4896506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 5208399 - 5208333
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||    
T  5208399 agagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacat 5208333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 24235319 - 24235385
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  || ||||  |||| |||||| |||||||||||||| ||||||||||    
T  24235319 agagaaatgatatttgtacaa-tcaatttgtgacaa-tttttgtacaactttctctctcatactcacat 24235385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 25140026 - 25139964
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| ||| |||  ||||||||||| ||||| ||||||||| |||||||    
T  25140026 gagaaatgatatttgtacaa-ccactttattacaatttttt-gacaattttctctctcatactca 25139964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 410 - 481
Target Start/End: Complemental strand, 29531683 - 29531615
Alignment:
Q  410 gtttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||||| ||||||  ||||  ||||| ||| | ||||||||||||||| |||||||    
T  29531683 gtttatagagaaatgatatttgaacaaccattttt--tacaactttgt-gacaactttctctctcatactca 29531615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 29577508 - 29577442
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | |||||  ||||| |||||| |||||||||| ||| ||||||||||    
T  29577508 agagaaatgatatttgtacaa-ctatttttgtacaa-tttttgtacaactttctttctcatactcacat 29577442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 460 - 496
Target Start/End: Complemental strand, 34363238 - 34363202
Alignment:
Q  460 acaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||| ||||||||| ||||||    
T  34363238 acaactttctctcttatactaacatgatgtaattatc 34363202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 38338995 - 38338927
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||| ||||||| |||| | ||||| | |||| ||||  ||||||||||||||| ||||||||||    
T  38338995 agagaaattatatttgaacaatctattttacgacaacttttgtgacaactttctctctcatactcacat 38338927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 44250298 - 44250236
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||| | || ||||||  ||||||||||| |||||||||||| |||||||||    
T  44250298 gagaaatgatatttgtatatcc-attttgtaacaattttttg-acaactttctcttttatactca 44250236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 44257802 - 44257735
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||| | |||||   |||||||||  ||||||||||||||| ||||||||||    
T  44257802 agagaaatgatatttgtgcaatc-attttctaacaatttttgtgacaactttctctctcatactcacat 44257735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 479
Target Start/End: Original strand, 47998592 - 47998654
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatact 479  Q
    |||||||||||||||||||||| ||||||||  |||| ||||| ||||||||| ||||| |||||    
T  47998592 tagagaaatgatatttgtacaa-ccattttgtaacaacttttt-gacaactttttctctcatact 47998654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 48743713 - 48743775
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||||   |||||||||| ||||| ||||||||| ||||||||||    
T  48743713 aaatgatatttgtacaaccaatttt-taacaatttttt-gacaattttctctctcatactcacat 48743775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 48791670 - 48791592
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| | |||||  || || ||||| |||||||||  |||| |||||||||| ||||||||||    
T  48791670 tagagaaatgatatttgtacaa-ctatttttgtataa-tttttagacaacttttactctcatactcacattatgttattat 48791592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 49584993 - 49585060
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||| ||| |||||   | ||||||| |||||||||||||||| ||||||||||    
T  49584993 agagaaatgatatttctacgacc-attttctaataatttttgggacaactttctctctcatactcacat 49585060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 51389315 - 51389381
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  ||||| |  |||||||||| ||||||||||||| | ||||||||||    
T  51389315 agagaaatgatatttgtacaa-tcatttagtaacaatttttt-gacaactttctctttcatactcacat 51389381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 53583200 - 53583134
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  |||  | |||| |||||| |||||||||||||| ||||||||||    
T  53583200 agagaaatgatatttgtacaaccactttctc-acaactttttg-acaactttctctctcatactcacat 53583134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 6e-23; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 41877688 - 41877765
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  41877688 gagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatgttattatc 41877765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 417 - 492
Target Start/End: Original strand, 7949791 - 7949864
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttat 492  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||| ||| ||||||||||||||||||    
T  7949791 gagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctttctcatactcacatgatgttat 7949864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 14992072 - 14992150
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| | |||||||||||| ||||||| ||||||||||||||    
T  14992072 tagagaaat-atatttgtacaacc-attttgctacaattttttg-ataactttctctctcatactcagatgatgttattatc 14992150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 496
Target Start/End: Complemental strand, 40478355 - 40478281
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||| |||||||||||| |||||| |||||||||| ||| ||| ||||||||||||||||||    
T  40478355 aaatgatatttgtacaacc-attttgctacaactttttg-acaactttctatctcatattcacatgatgttattatc 40478281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 413 - 496
Target Start/End: Complemental strand, 45295814 - 45295733
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||| |||||||||||||| |||||||| ||| |||||  |||||| ||||||| ||||||||||||||||||||||    
T  45295814 tatagagaaattatatttgtacaacc-attttgctgcaacttttta-acaactatctctctcatactcacatgatgttattatc 45295733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 418 - 496
Target Start/End: Complemental strand, 25543041 - 25542965
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||| |||||||| ||| |||||| |||||||||||| | |||||||||| |||||||||||    
T  25543041 agaaatgatatttgtacaacc-attttgctgcaaatttttg-acaactttctctatcatactcacataatgttattatc 25542965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 47056597 - 47056530
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||| ||||| ||||||| ||||||||| |||||||||||||||| ||||||||||||    
T  47056597 gagaaatgatatttgtgcaacc-attttgcaacaattttt-ggacaactttctctctcatactcacatga 47056530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 1834506 - 1834571
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||| |||||||||||||| ||||||||||||||||| | |||||||||||||| ||||||||||    
T  1834506 gagaaataatatttgtacaacc-attttgctacaattttt-gaacaactttctctctcatactcacat 1834571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 53932463 - 53932394
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    ||||||||||||||||||||||| ||||||  ||||||||| ||||||||||| |||| |||||||||||||    
T  53932463 agagaaatgatatttgtacaacc-attttgtgacaattttt-ggacaactttcactctcatactcacatgat 53932394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 33256308 - 33256381
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||| ||||||| ||||||  |||||||||  ||||| |||||||||||||| |||||||||||    
T  33256308 agagaaatgatatttatacaacc-attttgagacaatttttatgacaattttctctcttatacgcacatgatgtt 33256381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 108430 - 108496
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | ||||  ||||||||||| |||||||||||||| ||||||||||    
T  108430 agagaaatgatatttgtacaacc-actttgtgacaattttttg-acaactttctctctcatactcacat 108496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 16479631 - 16479697
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||| ||||| ||||  ||||||||||||||| ||||||||||    
T  16479631 agagaaatgatatttgtacaa-ccattttg-tacaacttttgtgacaactttctctctcatactcacat 16479697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 27162541 - 27162463
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||| |||||||||||||||| ||||||  |||| |||| | |||||||||||||| |||||||||||||||| |||||    
T  27162541 agagaagtgatatttgtacaacc-attttgtaacaactttt-gaacaactttctctctcatactcacatgatgttgttatc 27162463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 39604318 - 39604252
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||| | |||||||||| |||||||||||||||  |||||||||    
T  39604318 agagaaatgatatttgtacaa-ccatttttcaacaatttttt-gacaactttctctctcttactcacat 39604252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 414 - 474
Target Start/End: Original strand, 49886691 - 49886749
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctctt 474  Q
    ||||||||||||||||||||||| ||||||||||| || ||||| ||||||||||||||||    
T  49886691 atagagaaatgatatttgtacaa-ccattttgctataa-tttttagacaactttctctctt 49886749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 9557994 - 9557917
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||| ||||||  |||||| |||||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  9557994 agagaaatgatatttatacaaca-attttgatacaattttt-gtacaactttctctctcatactcacattatgtttttat 9557917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 11327108 - 11327177
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||| ||||||  |||| |||| | |||||||||||||| ||||||||||||||    
T  11327108 gagaaatgatatttgtacaacc-attttgtgacaactttt-gtacaactttctctctcatactcacatgatg 11327177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 418 - 496
Target Start/End: Original strand, 25142627 - 25142705
Alignment:
Q  418 agaaatgatatttgtacaacccatttt-gctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||| |||||||||||||||  |||| ||||||| |||||  |||| ||| ||||||||||||||||||||||||||||    
T  25142627 agaaacgatatttgtacaaccattttttgctacaacttttta-acaattttatctcttatactcacatgatgttattatc 25142705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 25542942 - 25542899
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    ||||||||||||| |||| |||||||||||||||||||||||||    
T  25542942 tcattgtttttgaccaatcaaaagagaggaaaccaaagttgtca 25542899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 29573427 - 29573361
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  29573427 gagaaatgatatttgtacaacc-attttgtaacaacttttgtgacaactttctctctcatactcacat 29573361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 43409436 - 43409368
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||| ||||  | || |||||||| |||||||||||||||||||||||    
T  43409436 atagagaaatgatatttgtacaa-ccactttgtgataa-tttttggaaaactttctctcttatactcacat 43409368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 44334875 - 44334807
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||| |||  ||||| ||||| ||||||||||||||| ||||||||||    
T  44334875 atagagaaatgatatttgtacaa-ccactttattacaacttttt-gacaactttctctctcatactcacat 44334807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 47141671 - 47141607
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    |||||||||||||||||||||| |||||| || ||||||| | |||||||||||||| |||||||||    
T  47141671 gagaaatgatatttgtacaacc-attttggtataattttt-gtacaactttctctctcatactcaca 47141607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 48405409 - 48405482
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||||| ||||||||  |||| ||||   |||||||||||||| |||||||||| |||||    
T  48405409 agagaaatgatatttgtacaa-ccattttgtgacaacttttgtaacaactttctctctcatactcacattatgtt 48405482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 490
Target Start/End: Complemental strand, 50025770 - 50025698
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||||||| |||||| || || |||| | |||||||||||||| |||||||||| |||||    
T  50025770 agagaaatgatatttgtacaacc-attttggtataaatttt-gtacaactttctctctcatactcacattatgtt 50025698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 2280174 - 2280253
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| |||||||  |||||  ||||| |||||||||||||| | |||||||| ||||| ||||    
T  2280174 atagagaaatgatatttgtacaa-ccattttagtacaa-cttttgtacaactttctctctcacactcacattatgtttttat 2280253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 5114077 - 5114143
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||||||  ||||  ||||||||||| ||||||||||||||| | ||||||||    
T  5114077 agagaaatgatatttgaacaaccattttt--tacaatttttttgacaactttctctctcacactcacat 5114143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 481
Target Start/End: Complemental strand, 35376623 - 35376560
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| ||||||||  |||| ||||| ||||||||||||||| |||||||    
T  35376623 agagaaatgatatttgtacaa-ccattttgtgacaa-tttttagacaactttctctctcatactca 35376560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 37894320 - 37894248
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| ||||||||||||||||||||| |||||||   |||| ||||  ||||||||||||||| ||||||||||    
T  37894320 tttaaagagaaatgatatttgtacaa-ccattttctaacaacttttgtgacaactttctctctcatactcacat 37894248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 7294173 - 7294094
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| || | ||||  |||| || || ||||||||||||||| |||||||||| ||||| ||||    
T  7294173 tagagaaatgatatttgtacatcc-actttgtgacaacttcttagacaactttctctctcatactcacattatgtttttat 7294094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 488
Target Start/End: Original strand, 8254026 - 8254096
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| ||||||  |||| |||  | |||||||||||||| ||||||||||||||    
T  8254026 agagaaatgatatttgtacaacc-attttgtgacaactttg-gtacaactttctctctcatactcacatgatg 8254096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 27646496 - 27646574
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| | ||||||| | |||||| ||||||||||| ||||| || ||||||| ||||| ||||    
T  27646496 tagagaaatgatatttgtacaatc-attttgcaataatttt-tggacaactttatctctcatgctcacattatgtttttat 27646574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 32931990 - 32931920
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||||||    
T  32931990 agagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacatgatg 32931920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 38471644 - 38471718
Alignment:
Q  419 gaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||| |||||||| |||||  ||||| |||| ||||||||| |||||||||| ||||| ||||    
T  38471644 gaaatgatatttgtacaa-ccattttggtacaa-cttttgtacaattttctctctcatactcacattatgtttttat 38471718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 43176201 - 43176267
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||| ||||||||| | ||||||||| ||||| ||||||||||    
T  43176201 agagaaatgatatttgtacaa-ccactttgttacaattttat-gacaactttatctctcatactcacat 43176267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 43900829 - 43900763
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||  ||||| |||||| |||||||||||||| ||||||||||    
T  43900829 agagaaatgatatttgtacaacc-actttattacaactttttg-acaactttctctctcatactcacat 43900763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 16295464 - 16295529
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| ||| |||| |||||  ||||| |||||||||||||| ||||||||||    
T  16295464 gagaaatgatatttgtacaa-ccaatttgatacaa-cttttgtacaactttctctctcatactcacat 16295529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 40478258 - 40478215
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||    
T  40478258 tcattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 40478215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 51032699 - 51032630
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||| |||||||   |||| ||||| ||||| ||||||||| ||||||||||    
T  51032699 tatagagaaatgatatttgtacaa-ccattttctaacaacttttt-gacaattttctctctcatactcacat 51032630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 51771510 - 51771445
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||| || |||||||| || || ||||||||| ||||||||||    
T  51771510 gagaaatgatatttgtacaa-ccattttg-tataatttttttgataattttctctctcatactcacat 51771445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 2482745 - 2482669
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||| || ||||||  |||| |||| | |||||||||||||| ||| |||||||||||| ||||    
T  2482745 gagaaatgatatttgtacatcc-attttgtgacaactttt-gaacaactttctctctcataatcacatgatgttgttat 2482669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 30805674 - 30805598
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||   ||||||||| |||| ||||| |||||||| |||||| |||||||||| ||||| ||||    
T  30805674 gagaaatgatatttgtac-ctccattttgcaacaacttttt-gacaacttcctctctcatactcacattatgtttttat 30805598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 36671087 - 36671020
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||||  ||||  ||||||||||  ||||||||| ||||| ||||||||||    
T  36671087 tagagaaatgatatttgaacaaccattttt--tacaatttttgtgacaactttttctctcatactcacat 36671020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 36869911 - 36869843
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||||   ||||  |||| ||||||||||||||| ||||||||||    
T  36869911 atagagaaatgatatttgtacaa-ccattttttgacaa-cttttagacaactttctctctcatactcacat 36869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 45295709 - 45295667
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
T  45295709 cattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 45295667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 46623901 - 46623972
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||| ||||||    
T  46623901 tttatagagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctgatattcacat 46623972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 46815929 - 46815864
Alignment:
Q  417 gagaaatgatatttgtacaacc-cattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||   |||||||||| ||||| ||||||||| ||| ||||||    
T  46815929 gagaaatgatatttgtacaaccacatttt---acaatttttttgacaattttctctctcatattcacat 46815864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 462472 - 462409
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||||||| ||||||||  ||||  |||| ||||||||||||||| ||||||||    
T  462472 gagaaatgatatttgtacaa-ccattttgtgacaa-cttttagacaactttctctctcatactcac 462409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 10811133 - 10811201
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| ||||||||||    
T  10811133 tagagaaatgatatttgaacaacc-attttatgacaacttttgtgacaactttctctctcatactcacat 10811201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 477
Target Start/End: Original strand, 12792637 - 12792696
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttata 477  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| |||||||||||||||||||    
T  12792637 agagaaatgatatttgtacaa-ccactttgtgacaa-tttttagacaactttctctcttata 12792696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 561
Target Start/End: Original strand, 22813172 - 22813213
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtc 561  Q
    |||||||||||| |||| |||||||||||||| |||||||||    
T  22813172 cattgtttttgaccaatgaaaagagaggaaacaaaagttgtc 22813213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 520 - 557
Target Start/End: Original strand, 25142729 - 25142766
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagt 557  Q
    |||||||||||| |||||||||||||||||| ||||||    
T  25142729 cattgtttttgaccaattaaaagagaggaaaacaaagt 25142766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 7286 - 7220
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  ||||||   ||||  |||||||||||||||||||| ||||||||||    
T  7286 agagaaatgatatttgtacaa-tcattttctgacaa-cttttggacaactttctctctcatactcacat 7220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 1901998 - 1901932
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | ||||  |||| |||| | |||||||||||||| ||||||||||    
T  1901998 agagaaatgatatttgtacaacc-actttgtgacaacttttag-acaactttctctctcatactcacat 1901932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 1911444 - 1911378
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | ||||  |||| |||| | |||||||||||||| ||||||||||    
T  1911444 agagaaatgatatttgtacaacc-actttgtgacaacttttag-acaactttctctctcatactcacat 1911378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 472
Target Start/End: Original strand, 5398917 - 5398971
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctc 472  Q
    ||||||||||||||||||||| ||| ||||  |||||||||| ||||||||||||||    
T  5398917 agagaaatgatatttgtacaa-ccactttgtgacaatttttt-gacaactttctctc 5398971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 7668258 - 7668193
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| |||| |  ||||  ||||| ||||| ||||| ||||||||||||||||||||    
T  7668258 gagaaatgatatttgaacaatcattttt--tacaacttttttgacaattttctctcttatactcacat 7668193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 9159108 - 9159042
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| |||||| |||| ||||||| | ||||||||||    
T  9159108 agagaaatgatatttgtacaa-ccatttttgtacaa-tttttgtacaattttctctttcatactcacat 9159042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 14207329 - 14207258
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgt 489  Q
    ||||||||||||||| |||||  ||||||  |||| ||||  ||||||||||||||| |||||||||| ||||    
T  14207329 gagaaatgatatttgaacaacg-attttgtaacaacttttgtgacaactttctctctcatactcacattatgt 14207258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 489
Target Start/End: Complemental strand, 14215077 - 14215006
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgt 489  Q
    ||||||||||||||| |||||  ||||||  |||| ||||  ||||||||||||||| |||||||||| ||||    
T  14215077 gagaaatgatatttgaacaacg-attttgtaacaacttttgtgacaactttctctctcatactcacattatgt 14215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 16969637 - 16969572
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||  ||||||  |||||  |||| ||||| ||||||||||||||| ||||||||||    
T  16969637 gagaaatgatattttaacaaccatttttg--acaacttttttgacaactttctctctcatactcacat 16969572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 480
Target Start/End: Original strand, 20215947 - 20216009
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||| ||||||    
T  20215947 agagaaatgatatttgtacaa-ccactttgtgacaa-tttttagacaactttctctctcatactc 20216009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 26014812 - 26014877
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  26014812 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 26014877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 26279883 - 26279949
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||   |||| ||||| ||||||||||||||| ||||||||||    
T  26279883 agagaaatgatatttgtacaa-ccactttctgacaacttttt-gacaactttctctctcatactcacat 26279949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 28300286 - 28300348
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| |||||||  || |||||||| ||||||||| ||| |||||||||    
T  28300286 gagaaatgatatttgtacaa-ccattttattataatttttt-gacaactttttcttttatactca 28300348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 31176511 - 31176449
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| ||| ||||  | || ||||| |||||||||||||||||||||||    
T  31176511 gagaaatgatatttgtacaa-ccactttgtgataa-tttttagacaactttctctcttatactca 31176449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 494
Target Start/End: Complemental strand, 32981195 - 32981117
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttatta 494  Q
    |||||||||| |||||||||||||| |||| |  |||| |||| | |||||||||||||| |||||||||| || ||||||    
T  32981195 atagagaaattatatttgtacaacc-atttagtgacaacttttag-acaactttctctctcatactcacattatattatta 32981117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 36818955 - 36819021
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||    
T  36818955 agagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacat 36819021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 45186624 - 45186557
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||| ||||||||||||||| |||||   |||||||||  ||||||||||||||| || |||||||    
T  45186624 agagaaaagatatttgtacaacc-attttctaacaatttttgtgacaactttctctctcatgctcacat 45186557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 46019461 - 46019528
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||| |  ||||||| |||| ||||  ||||||||||||||| ||||||||||    
T  46019461 agagaaatgatatttgaacatct-attttgcgacaacttttgtgacaactttctctctcatactcacat 46019528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 46473127 - 46473193
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||| |||| |||||  |||| ||||||||| ||||||||||    
T  46473127 agagaaatgatatttgtacaa-ccactttgcgacaacttttt-aacaattttctctctcatactcacat 46473193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 47849671 - 47849737
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  | |||||||| |||||||||||||   ||||||||||    
T  47849671 agagaaatgatatttgtacaa-ccattttgtgataatttttt-gacaactttctcttacatactcacat 47849737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 49196695 - 49196761
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  |||| ||| | ||||| ||||||||| ||||||||||    
T  49196695 agagaaatgatatttgtacaa-ccattttgtgacaactttgt-gacaattttctctctcatactcacat 49196761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 49761258 - 49761192
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||| |||  | |||||| |||||||||||||| | ||||||||    
T  49761258 agagaaatgatatttgtacaa-ccatttt-ctaacaatttttgtacaactttctctctcacactcacat 49761192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 49983423 - 49983360
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    |||||||||||||||| ||| || |||| | ||||| |||| |||||||||||||||| ||||||    
T  49983423 agagaaatgatatttgaacatcc-atttggttacaacttttgggacaactttctctctcatactc 49983360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 55; Significance: 3e-22; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 25924935 - 25924859
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  25924935 gagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatgttattat 25924859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 28965912 - 28965835
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| |||||| ||||| |||||| |||||||||||||| ||||||||||||| |||||||    
T  28965912 agagaaatgatatttgtacaacc-attttgttacaactttttg-acaactttctctctcatactcacatgatattattat 28965835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 15364656 - 15364736
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga-tgttattatc 496  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  15364656 tagagaaatgatatttgtacaa-ccattttgctacaatttttt-aacaactttgtctctcatactcacatgattgttattatc 15364736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 411 - 496
Target Start/End: Original strand, 26668490 - 26668573
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||| | || |||||||||||||||||||| |||||||||||    
T  26668490 tttaaagagaaatgatatttgtacaatc-attttgctataattttttg-ataattttctctcttatactcacatcatgttattatc 26668573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 15328487 - 15328566
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||| |||||||||||||| |||||||||||| |||||  |||||||| |||||  |||||||||||||||||||||    
T  15328487 tagagaaattatatttgtacaacc-attttgctacaacttttta-acaactttgtctctcttactcacatgatgttattatc 15328566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 417 - 496
Target Start/End: Complemental strand, 31368679 - 31368602
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||  ||||| || |||||||  ||||| ||||| ||| ||||||||||||||||||||||    
T  31368679 gagaaatgatatttgtacaaccatttttgttataattttt--gacaattttctatctcatactcacatgatgttattatc 31368602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 19789148 - 19789082
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  19789148 agagaaatgatatttgtacaacc-attttattacaactttttg-acaactttctctctcatactcacat 19789082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 34413091 - 34413167
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||||||| ||| ||| ||| |||||||| ||||    
T  34413091 agagaaatgatatttgtacaa-tcattttgctacaatttttt-gacaactttctttctcatattca-atgatgttgttat 34413167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 3339571 - 3339503
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||||||||| ||||||  |||| |||| | |||||||||||||| ||||||||||||    
T  3339571 agagaaatgatatttgtacaacc-attttgtgacaactttt-gtacaactttctctctcatactcacatga 3339503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 490
Target Start/End: Complemental strand, 25127905 - 25127832
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||||| ||||||||  |||| ||||  || |||||||||||| |||||||||| |||||    
T  25127905 agagaaatgatatttgtacaa-ccattttgtaacaacttttgtgaaaactttctctctgatactcacattatgtt 25127832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 237470 - 237392
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| || |||  |  | |||||| |||||||||||||| |||||||||||||||| |||||    
T  237470 agagaaatgatatttgtacaacc-atcttgtgattactttttg-acaactttctctctcatactcacatgatgttcttatc 237392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 3821377 - 3821443
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||  ||||||||||| ||||||||||||||| ||||| ||||    
T  3821377 agagaaatgatatttgtacaa-ccactttattacaatttttt-gacaactttctctctcatacttacat 3821443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 11785354 - 11785420
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  |||||||||| ||||||||||| ||| ||| ||||||    
T  11785354 agagaaatgatatttgtacaa-ccattttgtgacaatttttt-gacaactttctatctcatattcacat 11785420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 17417307 - 17417241
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  |||| ||  |||| ||||||||||||||||||||| ||||||||||    
T  17417307 agagaaatgatatttgtacaa-tcattatgtgacaa-tttttggacaactttctctctcatactcacat 17417241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 453 - 493
Target Start/End: Original strand, 21210293 - 21210333
Alignment:
Q  453 tttttggacaactttctctcttatactcacatgatgttatt 493  Q
    |||||| |||||||||||||| |||||||||||||||||||    
T  21210293 tttttgaacaactttctctctcatactcacatgatgttatt 21210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 25554240 - 25554310
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| |||||||||||||||||||| ||||||||   |||||||||  |||||||||||||| ||||||||||    
T  25554240 ttattgagaaatgatatttgtacaa-ccattttgtggcaatttttt-tacaactttctctctcatactcacat 25554310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 25995437 - 25995507
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| |||||||||||||||||||||| ||||||   |||||||| | |||||||||||||| ||||||||||    
T  25995437 ttattgagaaatgatatttgtacaacc-attttgtggcaattttt-gtacaactttctctctcatactcacat 25995507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 482
Target Start/End: Original strand, 34976615 - 34976678
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    ||||||||||||||||||||||| |||| |    || |||||| |||||||||||||||||||||||    
T  34976615 agagaaatgatatttgtacaaccaatttggt---aaatttttgtacaactttctctcttatactcac 34976678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 1376364 - 1376430
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||| |||||||||||||| |||||   |||| ||||  ||||||||||||||||||||||||||    
T  1376364 gagaaattatatttgtacaacc-attttctaacaacttttgtgacaactttctctcttatactcacat 1376430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 1384112 - 1384178
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||| |||||||||||||| |||||   |||| ||||  ||||||||||||||||||||||||||    
T  1384112 gagaaattatatttgtacaacc-attttctaacaacttttgtgacaactttctctcttatactcacat 1384178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 562
Target Start/End: Original strand, 15328590 - 15328632
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
T  15328590 cattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 15328632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 24881800 - 24881758
Alignment:
Q  454 ttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||| |||| ||||||||||||| ||||||||||||||||||    
T  24881800 ttttgaacaattttctctcttatattcacatgatgttattatc 24881758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 520 - 562
Target Start/End: Complemental strand, 25924834 - 25924792
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    |||||||||||| |||| ||||||||||||| |||||||||||    
T  25924834 cattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 25924792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 8645308 - 8645374
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||||| | |||||  |||| ||||  ||||||||||||||| ||||||||||    
T  8645308 agagaaatgatatttgaacaacactttttg--acaacttttgtgacaactttctctctcatactcacat 8645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 9954546 - 9954613
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||| ||||| ||||    
T  9954546 tagagaaatgatatttgtacaa-ccaatttgtgacaacttttt-gacaactttctctctcatacttacat 9954613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 17835612 - 17835675
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    ||||||||||||||||||||||| ||||   |||| ||||| ||||||||||||||| ||||||||    
T  17835612 gagaaatgatatttgtacaaccc-ttttctaacaacttttt-gacaactttctctctcatactcac 17835675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 21506334 - 21506401
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| ||||||||||||||||||| |||||   |||| |||||| |||||||||||||| ||||||||||    
T  21506334 tagataaatgatatttgtacaacc-attttttgacaactttttg-acaactttctctctcatactcacat 21506401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 2242094 - 2242027
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| |||| | |||||   |||||||||  ||||||||||||||| ||||||||||    
T  2242094 agagaaatgatatttgaacaatc-attttttgacaatttttgtgacaactttctctctcatactcacat 2242027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 8778944 - 8778878
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||   |||| ||||| ||||||||||||||  ||||||||||    
T  8778944 agagaaatgatatttgtacaa-ccattttttaacaacttttt-gacaactttctctcacatactcacat 8778878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 15722575 - 15722509
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  |||||||  |||| ||||| |||||| |||||||| ||||||||||    
T  15722575 agagaaatgatatttgtacaa-tcattttgtgacaacttttt-gacaaccttctctctcatactcacat 15722509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 25811909 - 25811844
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  25811909 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 25811844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 26094900 - 26094970
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| |||||||||||||||||||| ||||||||   ||| |||||| |||||||| ||||| ||||||||||    
T  26094900 ttattgagaaatgatatttgtacaa-ccattttgtggcaa-tttttgtacaactttatctctcatactcacat 26094970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 561
Target Start/End: Original strand, 26668602 - 26668638
Alignment:
Q  525 tttttgatcaattaaaagagaggaaaccaaagttgtc 561  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  26668602 tttttgatcaatcaaaagagaggaaaacaaagttgtc 26668638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 29383556 - 29383622
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||   |||| ||||| ||||||||||||||| ||||||||||    
T  29383556 agagaaatgatatttgtacaa-ccactttctgacaacttttt-gacaactttctctctcatactcacat 29383622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 30796147 - 30796081
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  ||||||||||  |||||||||||| | ||||||||||    
T  30796147 agagaaatgatatttgtacaa-ccactttgtgacaatttttt-tacaactttctctttcatactcacat 30796081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Complemental strand, 31934225 - 31934163
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| |||||||| ||||| |||||| |||| ||||||| | ||||||||||    
T  31934225 aaatgatatttgtacaa-ccattttgatacaa-tttttgaacaattttctctgtcatactcacat 31934163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 34047387 - 34047452
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  34047387 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 34047452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Complemental strand, 34570663 - 34570600
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| ||||||  | || ||||  ||||||||||||||| ||||||||||    
T  34570663 aaatgatatttgtacaacc-attttgtaataacttttgtgacaactttctctctcatactcacat 34570600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 59)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 38504168 - 38504247
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||| |||||    
T  38504168 tagagaaatgatatttgtacaacc-attttgctacaattttttg-acaactttctctctaatactcatatgatgttgttatc 38504247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 29509266 - 29509343
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||| |||||||||||| |||||| |||||||||||||| ||||||||||||| ||||||||    
T  29509266 gagaaatgatatttgtacaacc-attttgctacaactttttg-acaactttctctctcatactcacatgatattattatc 29509343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 42786731 - 42786665
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||  ||||||||||  ||||||||||||||||||||||||||    
T  42786731 gagaaatgatatttgtacaacc-attttcttacaatttttgtgacaactttctctcttatactcacat 42786665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 43587640 - 43587717
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||| |||| |||||||||||| |||||| |||| ||||||||| |||||||||||||||| ||||    
T  43587640 agagaaatgatatttgtataacc-attttgctacaactttttg-acaattttctctctcatactcacatgatgttgttat 43587717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 6105510 - 6105434
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttat 492  Q
    ||||| ||||||||||||||||||| |||||  ||||| |||||| |||||||||||||| ||||||||||||||||||    
T  6105510 atagaaaaatgatatttgtacaacc-atttttttacaactttttg-acaactttctctctcatactcacatgatgttat 6105434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 28156202 - 28156279
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| |||||||| ||||| |||||| |||||||||||||| ||||| |||| ||||| ||||    
T  28156202 agagaaatgatatttgtacaa-ccattttggtacaa-tttttgtacaactttctctctcatacttacattatgtttttat 28156279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 38675600 - 38675669
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||||| ||| |||||||  ||||||||||||||| |||| |||||    
T  38675600 atagagaaatgatatttgtacaa-ccatttttctataatttttatgacaactttctctctcatacccacat 38675669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 43602494 - 43602418
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||| |||| | | |||||||||||| ||||||    
T  43602494 gagaaatgatatttgtacaa-ccattttgctacaacttttt-gacaacttgctctttcagactcacatgatggtattat 43602418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 414 - 495
Target Start/End: Complemental strand, 5742731 - 5742652
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| |||||||| |||||  ||||| |||||||| ||||| |||||||||| ||||| ||||    
T  5742731 atagagaaatgatatttgtacaa-ccattttggtacaa-cttttgtacaactttatctctcatactcacattatgtttttat 5742652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 519 - 579
Target Start/End: Original strand, 29509366 - 29509426
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||||| |||| || ||||||    
T  29509366 tcattgtttttgaccaataaaaagagaggaaaacaaagttgtcattaaatgaatgtacaaa 29509426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 41305054 - 41304988
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||  ||||||||| || |||||||||||||||||||||||||    
T  41305054 agagaaatgatatttgtacaacc-actttattacaattttatg-acaactttctctcttatactcacat 41304988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 32674304 - 32674227
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| |||||| || || |||| | |||||||||||||| |||||||||| ||||| ||||    
T  32674304 agagaaatgatatttgtacaacc-attttggtataactttt-gtacaactttctctctcatactcacattatgtttttat 32674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 11089573 - 11089653
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||| ||||||||||||||||| ||||||| ||| |||||||| ||||||||| ||||| | ||||||||| |||| |||||    
T  11089573 atagataaatgatatttgtacaa-ccattttactataatttttt-gacaactttttctctcacactcacatgttgtttttatc 11089653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 43873762 - 43873686
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| ||||||||  |||||||||| ||||||| ||||| | |||||||||| ||||| ||||    
T  43873762 gagaaatgatatttgtacaa-ccattttgtgacaatttttt-gacaactctctctttcatactcacattatgtttttat 43873686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 20473773 - 20473844
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||| |||||||||||||||||||| |||||||   |||||||||| ||||||||||||| | ||||||||||    
T  20473773 tttattgagaaatgatatttgtacaa-ccattttataacaatttttt-gacaactttctctatcatactcacat 20473844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 488
Target Start/End: Complemental strand, 30928004 - 30927933
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||| ||| ||||  |||| |||||| |||||||||||||| ||||||| ||||||    
T  30928004 tagagaaatgatatttgtacaa-ccaatttgtgacaa-tttttgtacaactttctctctcatactcatatgatg 30927933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 22836211 - 22836145
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||  ||||| |||| | |||||||||||||| ||||||||||    
T  22836211 agagaaatgatatttgtacaacc-attttcatacaaatttt-gtacaactttctctctcatactcacat 22836145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 27630896 - 27630962
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| || |||||   ||||||||||| |||||||||||||| ||||||||||    
T  27630896 agagaaatgatatttgtacatcc-attttatgacaattttttg-acaactttctctctcatactcacat 27630962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 28473617 - 28473551
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  ||||| |||||| |||| || |||||||||||| ||||||||||    
T  28473617 agagaaatgatatttgtacaaccacttttg-tacaatatttt-gataactttctctctcatactcacat 28473551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 483
Target Start/End: Original strand, 34970205 - 34970271
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    |||||||||||||||||||||| || |||||  |||| ||||| ||||||||||||||| |||||||||    
T  34970205 tagagaaatgatatttgtacaatcc-ttttgtaacaacttttt-gacaactttctctctcatactcaca 34970271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 34996432 - 34996366
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||  ||||||||||| ||||||||||||||| ||| ||||||    
T  34996432 agagaaatgatatttgtacaa-ccactttattacaatttttt-gacaactttctctctcatattcacat 34996366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 35818936 - 35819002
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| |||||| |||||   ||||||||||| |||||||||||||| ||||||||||    
T  35818936 agagaaatgatatttgcacaacc-attttctaacaattttttg-acaactttctctctcatactcacat 35819002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 414 - 486
Target Start/End: Original strand, 36064027 - 36064097
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||||||||| | ||||||  |||| |||| |||||| ||||||||| ||||||||||||    
T  36064027 atagagaaatgatatttgtacaatc-attttgtgacaactttt-ggacaattttctctctcatactcacatga 36064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 42716319 - 42716385
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  |||| | | ||||||||| |||||||||||||| ||||||||||    
T  42716319 agagaaatgatatttgtacaaccactttttc-ataattttttg-acaactttctctctcatactcacat 42716385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 43715874 - 43715940
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||| ||| || ||||  ||||||||||||||| ||||||||||    
T  43715874 agagaaatgatatttgtacaa-ccatttt-ctaaaacttttgtgacaactttctctctcatactcacat 43715940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 45101395 - 45101461
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||| ||||||||||    
T  45101395 agagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaactttctctctcatactcacat 45101461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 295545 - 295611
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||  |||  | |||||||||| || |||||||||||| ||||||||||    
T  295545 gagaaatgatatttgtacaaccactttatc-acaatttttttgataactttctctctcatactcacat 295611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 453 - 488
Target Start/End: Original strand, 10344358 - 10344393
Alignment:
Q  453 tttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||| ||||||||||||||    
T  10344358 tttttggacaactttctctctcatactcacatgatg 10344393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 10644873 - 10644807
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| ||||||||  |||| ||||  ||||||||||||||| ||| ||||||    
T  10644873 gagaaatgatatttgtacaa-ccattttgtaacaacttttgtgacaactttctctctcataatcacat 10644807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 12659052 - 12659117
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||   |||| ||||| ||||||||||||||| ||||||||||    
T  12659052 gagaaatgatatttgtacaaccaatttt-taacaacttttt-gacaactttctctctcatactcacat 12659117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 25830317 - 25830251
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||   |||| ||||  ||||||||||||||| ||||||||||    
T  25830317 gagaaatgatatttgtacaacc-attttctaacaacttttgtgacaactttctctctcatactcacat 25830251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 27325758 - 27325826
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| |||||||||||||    
T  27325758 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacatgat 27325826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 35937583 - 35937518
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||  |||| |||| |||||||||||||||| || |||||||    
T  35937583 gagaaatgatatttgtacaacc-attttgtaacaactttt-ggacaactttctctctcatgctcacat 35937518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 492
Target Start/End: Complemental strand, 1332542 - 1332466
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttat 492  Q
    |||||||||||||| |||||||| |||||||   |||||||||| ||||||||||||| | ||| ||||||||| ||||    
T  1332542 atagagaaatgataattgtacaa-ccattttataacaatttttt-gacaactttctctttcatattcacatgatattat 1332466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 413 - 495
Target Start/End: Complemental strand, 9048391 - 9048311
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| || |||||||   |||| ||||| ||||| ||||||||| |||||||||| ||||| ||||    
T  9048391 tatagagaaatgatatttgtataa-ccattttctaacaacttttt-gacaattttctctctcatactcacattatgtttttat 9048311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 11114740 - 11114664
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||| || ||||||| | || |||||| |||||||||||||| ||| |||||| ||||| ||||    
T  11114740 gagaaatgatatttgtacatcc-attttgcaataactttttg-acaactttctctctcatattcacattatgtttttat 11114664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 483
Target Start/End: Original strand, 31806299 - 31806363
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    |||||||||||||||||||| |||||||   |||||||||| ||||||||||||||| ||| |||||    
T  31806299 gagaaatgatatttgtacaa-ccattttctaacaatttttt-gacaactttctctctcatattcaca 31806363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 3946238 - 3946306
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||| || ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  3946238 tagagaaatgatatttgaacatcc-attttgtgacaacttttgtgacaactttctctctcatactcacat 3946306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 5924844 - 5924881
Alignment:
Q  453 tttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  5924844 tttttgtacaactttctctctcatactcacatgatgtt 5924881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 6849541 - 6849474
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||| ||||| ||||||| || |||||||||||| || ||||| ||||    
T  6849541 tagagaaatgatatttgtacaa-ccaatttgcaacaatttgtt-gacaactttctccctcatacttacat 6849474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 454 - 495
Target Start/End: Original strand, 14228742 - 14228783
Alignment:
Q  454 ttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||| |||||||||||||| |||||||||||||||| ||||    
T  14228742 ttttgtacaactttctctctcatactcacatgatgttcttat 14228783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 490
Target Start/End: Original strand, 35595244 - 35595281
Alignment:
Q  453 tttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  35595244 ttttttgacaactttctctctcatactcacatgatgtt 35595281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 36969750 - 36969682
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||  |||||  ||||| ||||  ||||||| ||||||||||||||||||    
T  36969750 tagagaaatgatatttgtaaaaca-attttattacaacttttgtgacaactatctctcttatactcacat 36969682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 40102021 - 40102088
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||||  |||| | |||| ||||| ||||||||||||||| ||||| ||||    
T  40102021 tagagaaatgatatttgtacaaccactttttc-acaacttttt-gacaactttctctctcatacttacat 40102088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 495
Target Start/End: Original strand, 42130993 - 42131072
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||| ||||||||||| ||||||| ||| ||| |||| |||| |||||||||||||||| ||| |||||| ||||| ||||    
T  42130993 atagaaaaatgatatttatacaacc-attctgcaacaactttt-ggacaactttctctctcatagtcacattatgtttttat 42131072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 67233 - 67166
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||   |||| ||||  ||||||||||||||| |||| |||||    
T  67233 agagaaatgatatttgtacaa-ccattttctaacaacttttgtgacaactttctctctcatacccacat 67166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Complemental strand, 3893466 - 3893404
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| | |||||| ||||| |||||| |||||||| ||||| ||||||||||    
T  3893466 aaatgatatttgtacaa-ctattttggtacaa-tttttgaacaactttttctctcatactcacat 3893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 6004943 - 6005009
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | | ||||  |||| ||||| ||||||||||||||| ||||||||||    
T  6004943 agagaaatgatatttgtacaa-ctactttgtgacaa-tttttagacaactttctctctcatactcacat 6005009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 6440080 - 6440147
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | ||||   ||||| ||||  ||||||||||||||| ||||||||||    
T  6440080 agagaaatgatatttgtacaa-ctatttctttacaacttttgtgacaactttctctctcatactcacat 6440147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 411 - 487
Target Start/End: Original strand, 7129527 - 7129601
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    ||||| || |||| |||||||||||||| ||||||  |||| |||| |||||||||||||||  |||||||||||||    
T  7129527 tttattgataaataatatttgtacaacc-attttgtgacaactttt-ggacaactttctctcacatactcacatgat 7129601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 484
Target Start/End: Complemental strand, 7777221 - 7777185
Alignment:
Q  448 acaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||  ||||||||||||||||||||||||||    
T  7777221 acaatttttgtgacaactttctctcttatactcacat 7777185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 9738765 - 9738699
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| |||   |||||||||| ||||| ||||||||| ||||||||||    
T  9738765 agagaaatgatatttgtacaa-ccactttctcacaatttttt-gacaattttctctctcatactcacat 9738699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 12045725 - 12045659
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||    
T  12045725 agagaaatgatatttgtacaacc-atttagtgacaacttttag-acaactttctctctcatactcacat 12045659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 493
Target Start/End: Complemental strand, 30943910 - 30943836
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttatt 493  Q
    |||||||||||||||||||||| |||||   |||| ||||| ||||| ||||||||| ||| |||||| ||||||||    
T  30943910 gagaaatgatatttgtacaaccaatttt-taacaacttttt-gacaattttctctctaataatcacatcatgttatt 30943836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 33100541 - 33100474
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| ||||||||||    
T  33100541 agagaaatgatatttgaacaacc-attttataacaacttttgtgacaactttctctctcatactcacat 33100474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 35067159 - 35067226
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||    |||| ||||  ||||||||||||||| ||||||||||    
T  35067159 agagaaatgatatttgtacaacc-atttcttaacaacttttgtgacaactttctctctcatactcacat 35067226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 478
Target Start/End: Complemental strand, 37663762 - 37663703
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatac 478  Q
    ||||||||| ||||||||| |||||||| |||||||||| |||||||  ||||||| ||||    
T  37663762 agaaatgatctttgtacaa-ccattttgttacaatttttaggacaaccctctctctcatac 37663703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 37784447 - 37784369
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| |||||||| || ||  ||||| |||| ||||||||| ||||||| || ||||| ||||    
T  37784447 tagagaaatgatatttgtacaa-ccattttggtataa-cttttgtacaattttctctctcatactcatattatgtttttat 37784369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 41293793 - 41293723
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||| ||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||||||    
T  41293793 agagaaatgatatttttacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacatgatg 41293723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 41192585 - 41192664
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||    
T  41192585 tagagaaatgatatttgtacaact-attttgctacaattttttg-acaactttctctctcatactcacatgatgttgttatc 41192664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 419 - 495
Target Start/End: Original strand, 35972576 - 35972650
Alignment:
Q  419 gaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||| | |||||| |||| ||||||| |||| |||||||||||||||||||||||||||||||    
T  35972576 gaaatgatatttgtacaatc-attttgttacatttttttg-acaattttctctcttatactcacatgatgttattat 35972650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 16553504 - 16553580
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| | |||||||||||| |||||  |||||||||||||| |||||||||||||||| ||||    
T  16553504 gagaaatgatatttgtacaatc-attttgctacaaatttttt-acaactttctctctcatactcacatgatgttgttat 16553580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 26685690 - 26685768
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| ||||  |||||| |||||  | |||||||||||| ||||||||||||||||||||||    
T  26685690 agagaaatgatatttgtacaacc-atttgactacaactttttt-ataactttctctctcatactcacatgatgttattatc 26685768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 26955421 - 26955499
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| ||||  |||||| |||||  | |||||||||||| ||||||||||||||||||||||    
T  26955421 agagaaatgatatttgtacaacc-atttgactacaactttttt-ataactttctctctcatactcacatgatgttattatc 26955499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 496
Target Start/End: Complemental strand, 22920563 - 22920486
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||| |||||||||||||| ||||||  |||| |||| |||||||||||||||| |||||||||||||||| |||||    
T  22920563 gagaaataatatttgtacaacc-attttgtaacaaatttt-ggacaactttctctctcatactcacatgatgttcttatc 22920486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 31006059 - 31006136
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||| ||  ||||||||| || |||||| |||||||||||||| ||||| ||||||||||||||||    
T  31006059 gagaaatgatatttgtacgact-attttgctaaaactttttg-acaactttctctctcatacttacatgatgttattatc 31006136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 5382541 - 5382618
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||  ||| || || |||||||| ||||||||||| | || ||||||||||||||||||||    
T  5382541 gagaaatgatatttgtacaaca-attatgttataatttttttgacaactttctgttttgtactcacatgatgttattat 5382618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 18695316 - 18695384
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  18695316 tagagaaatgatatttgtacaa-ccattttgtaacaacttttgtgacaactttctctctcatactcacat 18695384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 19271857 - 19271936
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| ||||||  ||||  ||| | |||||||||||||| |||||||||||||||| |||||    
T  19271857 tagagaaatgatatttgtacaacc-attttgtaacaacgtttag-acaactttctctctcatactcacatgatgttcttatc 19271936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 496
Target Start/End: Complemental strand, 36548453 - 36548374
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||| |||| ||||||  |||| ||| || |||||||||||||| |||||||||||||| |||||||    
T  36548453 tagagaaatgatatttgtataacc-attttgtgacaactttctg-acaactttctctctcatactcacatgatgctattatc 36548374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 6758863 - 6758796
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||| ||||||||| |||||   |||||||||  ||||||||||||||||||||||||||    
T  6758863 agagaaatgatatatgtacaacc-attttctaacaatttttgtgacaactttctctcttatactcacat 6758796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 7077413 - 7077344
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||| |||||||| ||||| ||||| || |||||||| ||| ||||||||||||||    
T  7077413 gagaaatgatatttgtacaa-ccattttgttacaacttttt-gataactttctttctcatactcacatgatg 7077344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 6940223 - 6940155
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||||   | |||||||  ||||||||||||||| ||||||||||    
T  6940223 tagagaaatgatatttgtacaa-ccattttataataatttttgtgacaactttctctctcatactcacat 6940155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 8920072 - 8920144
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| || ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  8920072 tttatagagaaatgatatttgaacatcc-attttgtgacaacttttgtgacaactttctctctcatactcacat 8920144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 488
Target Start/End: Original strand, 9594476 - 9594547
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||||||    
T  9594476 tagagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacatgatg 9594547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 421 - 486
Target Start/End: Complemental strand, 36786325 - 36786262
Alignment:
Q  421 aatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||| ||||| ||||||| | ||||||| |||||||||||||||| ||||||||||||    
T  36786325 aatgatatttgtccaacc-attttgcaataattttt-ggacaactttctctctcatactcacatga 36786262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 38500942 - 38501005
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| ||||||||  |||||||||| ||||||||||||| | |||||||    
T  38500942 agagaaatgatatttgtacaa-ccattttgtgacaatttttt-gacaactttctctttcatactca 38501005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 38730861 - 38730929
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||| |  |||||||| |  |||||||||||||||||||| ||||    
T  38730861 tagagaaatgatatttgtacaa-ccatttagtaacaattttcttaacaactttctctcttatactaacat 38730929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 39191911 - 39191840
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||| |||||| ||  ||||   ||||||||||| |||||||||||||||||||||||||    
T  39191911 tttatagagaaatgatatatgtacatccacttttta-acaattttttg-acaactttctctcttatactcacat 39191840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 39788777 - 39788710
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||||||| ||| ||  |||| |||| |||||||||||||||| ||||||||||||    
T  39788777 gagaaatgatatttgtacaacc-attatgtgacaactttt-ggacaactttctctctcatactcacatga 39788710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 17990214 - 17990290
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||| ||||||||||||| | ||||| |||||| ||  ||||||||||||||| |||||||||| ||||| ||||    
T  17990214 agagaaatgttatttgtacaacc-actttgcgacaattctt--gacaactttctctctcatactcacattatgtttttat 17990290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 20985601 - 20985535
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  ||||| || ||||||| | |||||||||||||| ||||||||||    
T  20985601 agagaaatgatatttgtacaaccatttttg-tataattttt-gtacaactttctctctcatactcacat 20985535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 25585529 - 25585451
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| |||||||  |||||  ||||| |||| ||||||||| |||||||||| ||||| ||||    
T  25585529 tagagaaatgatatttgtacaa-ccatttttgtacaa-cttttgtacaaatttctctctcatactcacattatgttcttat 25585451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 519 - 579
Target Start/End: Original strand, 31006157 - 31006217
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||| ||||||| |||| |||| |||||||| ||||||||||||| ||||||| ||||||    
T  31006157 tcattatttttgaccaatcaaaatagaggaaaacaaagttgtcattaaatggatgtacaaa 31006217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 495
Target Start/End: Original strand, 5380337 - 5380411
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||  ||| || || |||||||| ||||||||||| | || |||||||||| |||||||||    
T  5380337 aaatgatatttgtacaaca-attatgttataatttttttgacaactttctgttttgtactcacatggtgttattat 5380411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 9599799 - 9599730
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||||||    
T  9599799 gagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacatgatg 9599730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 12662018 - 12661953
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| || | ||||  ||||||||||| |||||||||||||| ||||||||||    
T  12662018 gagaaatgatatttgtacatcc-actttgtgacaattttttg-acaactttctctctcatactcacat 12661953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 22098255 - 22098321
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||   |||| ||||  ||||||||||||||| ||||||||||    
T  22098255 gagaaatgatatttgtacaa-ccattttctaacaacttttgtgacaactttctctctcatactcacat 22098321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 29765829 - 29765906
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| |||||||  |||||  ||||| |||||||||||||| | |||||||| ||||| ||||    
T  29765829 agagaaatgatatttgtacaa-ccattttagtacaa-cttttgtacaactttctctctcacactcacattatgtttttat 29765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 488
Target Start/End: Complemental strand, 30574448 - 30574379
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||||||||||    
T  30574448 gagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcacatgatg 30574379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 34381012 - 34381077
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| | ||||  |||| |||||| |||||||||||||| ||||||||||    
T  34381012 gagaaatgatatttgtacaacc-actttgtgacaactttttg-acaactttctctctcatactcacat 34381077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 36416133 - 36416068
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||   |||||||||| ||||||||||||||  ||||||||||    
T  36416133 gagaaatgatatttgtacaa-ccattttctaacaatttttt-gacaactttctctcacatactcacat 36416068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 579
Target Start/End: Original strand, 41192688 - 41192747
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    |||||||||||| |||| ||||||||| ||| ||||||||| ||| ||||||| ||||||    
T  41192688 cattgtttttgaccaatcaaaagagagaaaaacaaagttgtaattaaatggatgtacaaa 41192747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 450 - 484
Target Start/End: Complemental strand, 3674888 - 3674854
Alignment:
Q  450 aattttttggacaactttctctcttatactcacat 484  Q
    ||||||| |||||||||||||||||||||||||||    
T  3674888 aatttttgggacaactttctctcttatactcacat 3674854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 12779677 - 12779601
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| ||| ||||  |||| ||||| ||||||||| ||||| |||||||||| ||||| ||||    
T  12779677 gagaaatgatatttgtacaa-ccaatttgtgacaacttttt-gacaactttatctctcatactcacattatgtttttat 12779601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 14914371 - 14914443
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||||| ||||||||  ||||  ||||||||||||||||||   ||| ||||||||||||    
T  14914371 agagaaatgatatttgtacaa-ccattttgtgacaa-cttttggacaactttctcttacatattcacatgatgtt 14914443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 496
Target Start/End: Complemental strand, 32379965 - 32379923
Alignment:
Q  454 ttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||| |||||||||||||| |||||||||||||||| |||||    
T  32379965 ttttgaacaactttctctctcatactcacatgatgttgttatc 32379923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 33037518 - 33037585
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  33037518 tagagaaatgatatttgaacaaccattttt--tacaacttttatgacaactttctctctcatactcacat 33037585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 472
Target Start/End: Original strand, 2050925 - 2050980
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctc 472  Q
    |||||||||||||||||||||| ||||||||  |||| ||||||||||||||| ||||    
T  2050925 tagagaaatgatatttgtacaa-ccattttgtaacaa-tttttggacaactttatctc 2050980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 20125389 - 20125452
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||||||| ||| |||  ||||||||||| ||||||||| ||||| ||||||||    
T  20125389 gagaaatgatatttgtacaa-ccactttattacaatttttt-gacaactttttctctaatactcac 20125452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 36713251 - 36713184
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||| ||||  |||| || || ||||||||||||||| ||||||||||    
T  36713251 tagagaaatgatatttgtacaa-ccactttgtgacaacttctt-gacaactttctctctcatactcacat 36713184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 39595272 - 39595335
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||| ||||||||    
T  39595272 gagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaactttctctctcatactcac 39595335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 3031833 - 3031899
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  |||||  ||||| |||||||||||| | ||||||||||    
T  3031833 agagaaatgatatttgtacaa-ccatttttgtacaa-cttttgtacaactttctctttcatactcacat 3031899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 3771079 - 3771001
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||| ||||||| ||||||||  |||| ||||| ||||||  ||||||| |||||||||| ||||| ||||    
T  3771079 tagagaaatgatatctgtacaa-ccattttgtgacaacttttt-gacaaccctctctctcatactcacattatgttcttat 3771001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 22649732 - 22649667
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||||||||  ||||| ||||||||| ||||||||||    
T  22649732 gagaaatgatatttgaacaaccattttt--tacaatttttgtgacaattttctctctcatactcacat 22649667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 26660483 - 26660417
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| || ||||||  |||| || ||| |||||||||||||| ||||||||||    
T  26660483 agagaaatgatatttgtacatcc-attttgtgacaacttcttg-acaactttctctctcatactcacat 26660417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 26932075 - 26932009
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| || ||||||  |||| || ||| |||||||||||||| ||||||||||    
T  26932075 agagaaatgatatttgtacatcc-attttgtgacaacttcttg-acaactttctctctcatactcacat 26932009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 428 - 496
Target Start/End: Original strand, 28501628 - 28501694
Alignment:
Q  428 tttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||| ||||||  ||||||||| | |||||||||||||| ||| |||||||||||| |||||    
T  28501628 tttgtacaacc-attttgtgacaattttt-gtacaactttctctctcatattcacatgatgttcttatc 28501694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 483
Target Start/End: Complemental strand, 29807075 - 29807009
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcaca 483  Q
    ||||||||||| |||||||||||| |||||   ||||| ||||| |||||||||||||| |||||||||    
T  29807075 tagagaaatgacatttgtacaacc-attttttaacaatcttttg-acaactttctctctcatactcaca 29807009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 484
Target Start/End: Complemental strand, 31025075 - 31025011
Alignment:
Q  418 agaaatgatatttgtacaacc-cattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||| ||  ||||||||||  |||||||||||||| ||||||||||    
T  31025075 agaaatgatatttgtacaaccacattatg--acaatttttta-acaactttctctctcatactcacat 31025011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 31708370 - 31708432
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| |||||||   |||| ||||| ||||||||||||||| |||||||    
T  31708370 gagaaatgatatttgtacaa-ccattttataacaacttttt-gacaactttctctctcatactca 31708432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 33243810 - 33243745
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||  || ||  |||||||||| ||||||||||||||  ||||||||||    
T  33243810 gagaaatgatatttgtataaccatttgtg--acaatttttttgacaactttctctcgcatactcacat 33243745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 33743405 - 33743339
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||| |||| | |||  |||||||||||| |||||||||||||| ||||| ||||    
T  33743405 agagaaatgatatttgtataacc-actttattacaattttttg-acaactttctctctcatacttacat 33743339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 481
Target Start/End: Complemental strand, 36581536 - 36581474
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| ||| ||||  | || ||||| |||||||||||||||||||||||    
T  36581536 gagaaatgatatttgtacaa-ccactttgtgataa-tttttagacaactttctctcttatactca 36581474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 495
Target Start/End: Complemental strand, 41383427 - 41383348
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||| |||||||||||||| ||||||||  | || ||||| ||||||  ||||||| |||||||||||| ||| ||||    
T  41383427 tagagaactgatatttgtacaa-ccattttgtgataacttttttgacaaccctctctctcatactcacatgacgttcttat 41383348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 16975 - 17051
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| ||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||    
T  16975 gagaaatgatatttgtacaacc-attttactacaactttttg-acaactttctctctcatactcacatgatgttattat 17051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 42060655 - 42060733
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| ||||||||| || |||||| |||||||||||||| |||||||||||||||| |||||    
T  42060655 agagaaatgatatttgtacaacc-attttgctataactttttg-acaactttctctctcatactcacatgatgttgttatc 42060733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 435 - 496
Target Start/End: Complemental strand, 16645733 - 16645673
Alignment:
Q  435 aacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  16645733 aacccattttgctacaattttttg-acaactttctctctcatagtcacatgatgttattatc 16645673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 435 - 496
Target Start/End: Complemental strand, 17620094 - 17620034
Alignment:
Q  435 aacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||||    
T  17620094 aacccattttgctacaattttttg-acaactttctctctcatagtcacatgatgttattatc 17620034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 414 - 496
Target Start/End: Complemental strand, 33881779 - 33881699
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||| ||||||| |||||| || || |||||| | |||||||||||| ||||||||||||||||||||||    
T  33881779 atagagaaatgatatttatacaacc-attttggtataactttttg-ataactttctctctcatactcacatgatgttattatc 33881699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Complemental strand, 29609936 - 29609858
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||| |||||||||||||  ||||| |||||| |||||| |||||||||||||| ||||| ||||||||||||||||    
T  29609936 agagaaatcatatttgtacaact-attttactacaactttttg-acaactttctctctcatacttacatgatgttattatc 29609858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 46829478 - 46829545
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||||  |||||||||  ||||||||||||||| ||||||||||    
T  46829478 agagaaatgatatttgtacaacc-attttgtaacaatttttgtgacaactttctctctcatactcacat 46829545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 7295450 - 7295516
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||  |||||||||| | |||||||||||||| ||||||||||    
T  7295450 gagaaatgatatttgtacaacc-attttagtacaatttttggaacaactttctctctcatactcacat 7295516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 420 - 490
Target Start/End: Original strand, 1789994 - 1790062
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||  ||||||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  1789994 aaatgatatttgtacaact-attttgcgacaactttttg-acaactttctctctcatactcacatgatgtt 1790062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 19426577 - 19426645
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||||||  |||| ||||| ||||||||||||||| ||||||||||    
T  19426577 atagagaaatgatatttgtacaa-ccattttgtgacaacttttt-gacaactttctctctcatactcacat 19426645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 411 - 484
Target Start/End: Original strand, 2790171 - 2790242
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||| ||||||||||||||||||| ||| ||||  |||||||||| ||||||||||||||| ||||||||||    
T  2790171 tttatacagaaatgatatttgtacaa-ccactttgtaacaatttttt-gacaactttctctctcatactcacat 2790242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 5378626 - 5378692
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| ||||| ||||||||||||||| ||||||||||    
T  5378626 agagaaatgatatttgtacaa-ccatttttatacaacttttt-gacaactttctctctcatactcacat 5378692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 36108171 - 36108237
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||| |||||||||||  | |||||||||||| ||||||||||    
T  36108171 agagaaatgatatttgtacaa-ccattttgatacaatttttt-tataactttctctctcatactcacat 36108237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 495
Target Start/End: Original strand, 640395 - 640468
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||  ||||| |||||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  640395 aaatgatatttgtacaaccatttttg-tacaattttt-gtacaactttctctctcatactcacattatgtttttat 640468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 20406541 - 20406618
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||| || |||  |||| |||||| |||||||||| ||| |||||||||||||||| |||||    
T  20406541 gagaaatgatatttgtacaacc-atcttgtgacaactttttg-acaactttctttctcatactcacatgatgtttttatc 20406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 28548293 - 28548216
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  |||||| ||||| |||| | |||||||||||||| |||||||||| ||||| ||||    
T  28548293 agagaaatgatatttgtacaact-attttggtacaactttt-gtacaactttctctctcatactcacattatgtttttat 28548216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 488
Target Start/End: Original strand, 33050183 - 33050252
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    |||||||||||||||||||||| ||||||  |||| |||| | |||||||||||||| ||||||||||||||    
T  33050183 gagaaatgatatttgtacaacc-attttgtgacaactttt-gtacaactttctctctcatactcacatgatg 33050252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 48522155 - 48522232
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| |||||||  |||||  |||| ||||||||| ||||| |||||||||| ||||||||||    
T  48522155 agagaaatgatatttgtacaa-ccatttttgtacaa-cttttagacaactttttctctcatactcacattatgttattat 48522232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 37969931 - 37970007
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||  |||||| ||||| |||| | |||||||||||||| |||||||||| ||||| ||||    
T  37969931 gagaaatgatatttgtacaact-attttgatacaactttt-gtacaactttctctctcatactcacattatgtttttat 37970007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 41458971 - 41458895
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||| |||||||||||||| |||||  |||||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  41458971 gagaaataatatttgtacaacc-attttagtacaattttt-gtacaactttctctctcatactcacattatgtttttat 41458895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 43079706 - 43079638
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||| ||||  | || ||||||||||||||||||||| ||||||||||    
T  43079706 atagagaaatgatatttgtacaa-ccactttgtgataa-tttttggacaactttctctctcatactcacat 43079638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 35213025 - 35212950
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||   ||||||||||||||||| | |||||||||||||| ||| |||||| ||||| ||||    
T  35213025 agaaatgatatttgtacaatt-attttgctacaattttt-gtacaactttctctctcatattcacattatgtttttat 35212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 6269369 - 6269432
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||||   |||||||||  ||||||||||||||| ||||||||||    
T  6269369 aaatgatatttgtacaacc-attttataacaatttttgtgacaactttctctctcatactcacat 6269432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 41538481 - 41538547
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| |||||| ||||| |||||||| ||||||||||    
T  41538481 agagaaatgatatttgtacaa-ccatttttgtacaa-tttttgtacaaccttctctctcatactcacat 41538547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 156054 - 155976
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| || | ||||  |||| || || ||||||||||||||| |||||||||| ||||| ||||    
T  156054 agagaaatgatatttgtacatcc-actttgtgacaacttcttagacaactttctctctcatactcacattatgtttttat 155976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 3341699 - 3341775
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||  ||||  ||  |  |||| ||| ||||||||||| |||||||||||||||||||||    
T  3341699 gagaaatgatatttgtacaaccattttt--taagaacttttcgacgactttctctctcatactcacatgatgttattat 3341775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 12007258 - 12007188
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| |||||||||||||    
T  12007258 agagaaatgatatttgaacaacc-attttttgacaacttttgtgacaactttctctctcatactcacatgat 12007188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 28081853 - 28081788
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| ||||||||  | ||||||||  |||||||||||||| ||||||||||    
T  28081853 gagaaatgatatttgtacaa-ccattttgtaataatttttt-tacaactttctctctcatactcacat 28081788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 30538626 - 30538691
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  |||||| ||||| |||| | |||||||||||||| ||||||||||    
T  30538626 gagaaatgatatttgtacaaca-attttggtacaactttt-gtacaactttctctctcatactcacat 30538691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 414 - 481
Target Start/End: Original strand, 30941175 - 30941240
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||||| ||| ||||  |||| ||||| || ||||||||||||||||||||    
T  30941175 atagagaaatgatatttgtacaa-ccactttgtaacaa-tttttagataactttctctcttatactca 30941240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 33212042 - 33212107
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||   |||||||||| ||||||||| ||||| ||||||||||    
T  33212042 gagaaatgatatttgtacaa-ccattttctaacaatttttt-gacaactttatctctcatactcacat 33212107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 42476616 - 42476556
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatact 479  Q
    |||||||||||||||||||||  ||||| |||  | ||||||||||||||||||||| |||||    
T  42476616 gagaaatgatatttgtacaac--atttttctaacaatttttggacaactttctctctcatact 42476556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 44511138 - 44511215
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||| |||||||| ||||||  |||| |||| | |||||||||||| | |||||||||||||||| ||||    
T  44511138 agagaaatgatattcgtacaacc-attttgtgacaactttt-gtacaactttctctttcatactcacatgatgttcttat 44511215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 47944982 - 47945048
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||  |||||  ||||| ||||| |||||||| ||||||||||    
T  47944982 gagaaatgatatttgtacaaaccatttttgtacaa-cttttgtacaaccttctctctcatactcacat 47945048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 47950412 - 47950478
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||  |||||  ||||| ||||| |||||||| ||||||||||    
T  47950412 gagaaatgatatttgtacaaaccatttttgtacaa-cttttgtacaaccttctctctcatactcacat 47950478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 2347130 - 2347062
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||||||||| ||||||  |||| |||  | |||||||||||||| |||||||||||||    
T  2347130 gagaaatgatatttgtacaacc-attttgtgacaactttg-gtacaactttctctctcatactcacatgat 2347062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 3344856 - 3344932
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||  ||| |||||   ||||||||||| || ||||||||||| ||| |||||||||||||||||    
T  3344856 gagaaatgatatttgtatcacc-attttttaacaattttttg-acgactttctctctcatattcacatgatgttattat 3344932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 496
Target Start/End: Original strand, 8326134 - 8326202
Alignment:
Q  426 tatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||| ||||||  ||||| ||| | |||||||||||||| |||||||||||||||| |||||    
T  8326134 tatttgtacaacc-attttgtgacaatgttt-gcacaactttctctctgatactcacatgatgttcttatc 8326202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 9055266 - 9055332
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||  || |||| ||||| ||||||||||||||| ||||||||||    
T  9055266 agagaaatgatatttgtacaaccaattt--ctaacaacttttt-gacaactttctctctcatactcacat 9055332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 13152591 - 13152658
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||||  |||||  |||| ||||  ||||||||||||||| ||||||||||    
T  13152591 tagagaaatgatatttgaacaaccatttttg--acaacttttgtgacaactttctctctcatactcacat 13152658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 484
Target Start/End: Complemental strand, 34349097 - 34349033
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||||||  ||||| ||||| ||||| ||||||||| ||||||||||    
T  34349097 agaaatgatatttgtacaa-ccatttttgtacaacttttt-gacaattttctctctcatactcacat 34349033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 490
Target Start/End: Complemental strand, 11789762 - 11789691
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||||| |||||||  |||||  ||||| |||||||| ||||| |||||||||| |||||    
T  11789762 gagaaatgatatttgtacaa-ccattttagtacaa-cttttgtacaactttgtctctcatactcacattatgtt 11789691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 15564910 - 15564974
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| | ||||||| |||||||||  |||||||||  |||| |||||||    
T  15564910 agagaaatgatatttgtacaa-ctattttgcgacaatttttgtgacaactttagctctcatactca 15564974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 37899286 - 37899218
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||| || ||||||  |||||||||  ||||||||||||||| ||||| ||||    
T  37899286 tagagaaatgatatttgaacatcc-attttgtgacaatttttgtgacaactttctctctcatacttacat 37899218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 42276090 - 42276153
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| | |||||   |||||||||| || ||||||||||||||||||||    
T  42276090 agagaaatgatatttgtacaa-ctattttctaacaatttttt-gataactttctctcttatactca 42276153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 42584800 - 42584868
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||| ||||||||| |||||   |||| ||||  ||||||||||||||| ||||||||||    
T  42584800 tagagaaatgatatatgtacaacc-attttctaacaacttttgtgacaactttctctctcatactcacat 42584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 495
Target Start/End: Complemental strand, 44496873 - 44496797
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||| |||  |||||   |||||||||  ||||||||||||||| |||||||||| || |||||||    
T  44496873 agaaatgatatttgtataact-attttctaacaatttttgtgacaactttctctctcatactcacattatattattat 44496797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 484
Target Start/End: Complemental strand, 1471355 - 1471296
Alignment:
Q  424 gatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  1471355 gatatttgtacaacc-attttgtaacaacttttgtgacaactttctctctcatactcacat 1471296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 4971289 - 4971355
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  ||||  ||||  |||||||||||||| ||||||||||    
T  4971289 agagaaatgatatttgtacaa-ccattttgtgacaa-cttttatacaactttctctctcatactcacat 4971355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 484
Target Start/End: Complemental strand, 5174593 - 5174557
Alignment:
Q  448 acaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||  ||||||||||||||||||||||||||    
T  5174593 acaatttttgtgacaactttctctcttatactcacat 5174557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 495
Target Start/End: Original strand, 11070226 - 11070304
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| |||||||  || ||  ||||| |||||||||||| | |||||||||| ||||| ||||    
T  11070226 tagagaaatgatatttgtacaa-ccattttagtataa-cttttgtacaactttctctatcatactcacattatgttcttat 11070304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 30864489 - 30864419
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| |||| |  |||| |||| | |||||||||||||| ||||||| ||||||    
T  30864489 agagaaatgatatttgtacaaccaattt-gtgacaactttt-gtacaactttctctctcatactcatatgatg 30864419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 30941386 - 30941451
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  30941386 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 30941451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 31398123 - 31398189
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| ||||  || |||||||||||| ||||||||||    
T  31398123 agagaaatgatatttgtacaa-ccatttt-atacaacttttgtgataactttctctctcatactcacat 31398189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 38023496 - 38023430
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  | || ||||| ||||||||||||||| ||||||||||    
T  38023496 agagaaatgatatttgtacaa-ccactttgtgataa-tttttagacaactttctctctcatactcacat 38023430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 44184631 - 44184564
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||| |  ||||||| |||| ||||  ||||||||||||||| ||||||||||    
T  44184631 agagaaatgatatttgaacatct-attttgcgacaacttttgtgacaactttctctctcatactcacat 44184564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 45335865 - 45335927
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||  ||||| ||||| |||| | |||||||||||||| ||||||||||    
T  45335865 aaatgatatttgtacaaccatttttg-tacaactttt-gtacaactttctctctcatactcacat 45335927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 47448825 - 47448892
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| ||||||||||    
T  47448825 agagaaatgatatttgaacaacc-attttttgacaacttttgtgacaactttctctctcatactcacat 47448892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 47644708 - 47644770
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| | |||  || ||||||||| |||||||||||||| ||||||||||    
T  47644708 aaatgatatttgtacaacc-actttattataattttttg-acaactttctctctcatactcacat 47644770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 48639455 - 48639389
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  |||||  ||||| ||||| |||||||| ||||||||||    
T  48639455 agagaaatgatatttgtacaa-ccatttttgtacaa-cttttgtacaaccttctctctcatactcacat 48639389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 1e-18; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 420 - 496
Target Start/End: Complemental strand, 2257762 - 2257688
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||| |||||||||||| |||||  |||||||||||||| ||||||||||||||||||||||    
T  2257762 aaatgatatttgtacaacc-attttgctacaacttttta-acaactttctctctcatactcacatgatgttattatc 2257688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 21433473 - 21433395
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||||| ||||||  |||| ||||  |||||||||||||||||||||||||| ||||| ||||    
T  21433473 agagaaatgatatttgtacaacc-attttgtaacaacttttgtgacaactttctctcttatactcacattatgtttttat 21433395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 43196161 - 43196084
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| || |||||||||||| |||||| |||| ||||||||| |||||||||||||||| ||||    
T  43196161 agagaaatgatatttgtacatcc-attttgctacaactttttg-acaattttctctctcatactcacatgatgttgttat 43196084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 27563482 - 27563561
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||  |||||||||| |||||||| ||||| ||||||||| |||||||||| ||||| |||||    
T  27563482 tagagaaatgatatttgtacaa-tcattttgctataatttttt-gacaattttctctctcatactcacattatgttgttatc 27563561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 39815345 - 39815411
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||| |||||||||||||| |||||||||||| |||| |||||||||||||||| ||||||||||    
T  39815345 agagaaattatatttgtacaacc-attttgctacaactttt-ggacaactttctctctcatactcacat 39815411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 492
Target Start/End: Complemental strand, 49189280 - 49189206
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttat 492  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||||| ||| ||||||| ||||| ||||    
T  49189280 agagaaatgatatttgtacaa-ccattttgctacaacttttt-gacaactttctttctcatactcatatgatattat 49189206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 49596234 - 49596300
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||  |||||||||||| |||||||||||||| ||||||||||    
T  49596234 agagaaatgatatttgtacaacc-attttattacaattttttg-acaactttctctctcatactcacat 49596300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 36690647 - 36690578
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||||||| ||||||||||    
T  36690647 tatagagaaatgatatttgtacaaccaatttctc-acaatttttt-gacaactttctctctcatactcacat 36690578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 36706748 - 36706679
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||||| ||||  | |||||||||| ||||||||||||||| ||||||||||    
T  36706748 tatagagaaatgatatttgtacaaccaatttctc-acaatttttt-gacaactttctctctcatactcacat 36706679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 7203916 - 7203848
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||| |||| ||||||| ||||||||| | |||||||||||||| ||||||||||||    
T  7203916 agagaaatgatatttgtataacc-attttgcaacaatttttag-acaactttctctctcatactcacatga 7203848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 414 - 496
Target Start/End: Original strand, 26501292 - 26501372
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||| |||||||| ||  |  |||||||||||||||||||| ||||| |||||||||| |||||    
T  26501292 atagagaaatgatatttgtacaa-ccattttg-taataacttttggacaactttctctctcatacttacatgatgttcttatc 26501372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 486
Target Start/End: Original strand, 43056720 - 43056783
Alignment:
Q  421 aatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||| ||||||| | |||||| ||||||||||||||||| ||||||||||||    
T  43056720 aatgatatttgtacaacc-attttgcaataatttt-tggacaactttctctctcatactcacatga 43056783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 44641976 - 44641909
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||| | |||  |||||||||||| |||||||||||||| ||||||||||    
T  44641976 tagagaaatgatatttgtacaacc-actttattacaattttttg-acaactttctctctcatactcacat 44641909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 415 - 488
Target Start/End: Complemental strand, 51193204 - 51193133
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||| || |||||   ||||||||| |||||||||||||||| ||||||||||||||    
T  51193204 tagagaaatgatatttgtacatcc-attttataacaattttt-ggacaactttctctctcatactcacatgatg 51193133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 44112453 - 44112519
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||  |||||||||||| |||||||||||||| ||||||||||    
T  44112453 agagaaatgatatttgtacaacc-actttattacaattttttg-acaactttctctctcatactcacat 44112519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 520 - 579
Target Start/End: Complemental strand, 2257664 - 2257605
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    |||||||||||| |||| ||||||||||||| ||||||||||||  ||||||| ||||||    
T  2257664 cattgtttttgaccaatcaaaagagaggaaaacaaagttgtcatcaaatggatgtacaaa 2257605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 3919300 - 3919361
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    |||||||||||||||||||||| |||||| || |||||| ||||||||||||||||| ||||||    
T  3919300 gagaaatgatatttgtacaacc-attttgttataatttt-tggacaactttctctctcatactc 3919361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 413 - 484
Target Start/End: Original strand, 22674708 - 22674777
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||| | |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  22674708 tatagagaaatgatatttgtacaa-ctatttttgtacaa-tttttgtacaactttctctctcatactcacat 22674777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 27810324 - 27810253
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||||||| ||||  || |||| ||||| ||||||||||||||| ||||||||||    
T  27810324 tttatagagaaatgatatttgtacaaccaattt--ctaacaacttttt-gacaactttctctctcatactcacat 27810253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 411 - 490
Target Start/End: Complemental strand, 31428034 - 31427957
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||||||||||| ||| ||||  ||||||| || ||||||||||||| | |||||||||| |||||    
T  31428034 tttatagagaaatgatatttgtacaa-ccactttgtgacaatttctt-gacaactttctctatcatactcacattatgtt 31427957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 496
Target Start/End: Original strand, 37669398 - 37669475
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||| | |||||| ||||| |||||  |||| ||||||||| ||| ||||||||||||||||||    
T  37669398 gagaaatgatatttgtacaatc-attttgatacaacttttta-acaaatttctctctcatattcacatgatgttattatc 37669475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 495
Target Start/End: Original strand, 47113277 - 47113350
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||| | ||||||| | |||||| ||||||||||||||||| |||||||||| ||||| ||||    
T  47113277 aaatgatatttgtacaatc-attttgcaataatttt-tggacaactttctctctcatactcacattatgtttttat 47113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 1689388 - 1689457
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||||  |||||   |||||||||  ||||||||||||||| ||||||||||    
T  1689388 atagagaaatgatatttgtacaact-attttataacaatttttgtgacaactttctctctcatactcacat 1689457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 493
Target Start/End: Complemental strand, 43457892 - 43457816
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttatt 493  Q
    |||||||||||||||||||||||| ||||||| | || |||| |||||||||||||||| ||| || ||| ||||||||    
T  43457892 tagagaaatgatatttgtacaacc-attttgcgataactttt-ggacaactttctctctcatattctcattatgttatt 43457816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 416 - 486
Target Start/End: Complemental strand, 50777495 - 50777427
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||| |||||||||||||||| ||| ||| ||||||||| ||| |||||||||||| ||||||||||||    
T  50777495 agagaagtgatatttgtacaacc-attatgcgacaattttt-ggataactttctctctcatactcacatga 50777427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 481
Target Start/End: Original strand, 22331366 - 22331427
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||| |||||||| ||||||||||  ||||||||| ||||| |||||||    
T  22331366 gagaaatgatatttgtacaa-ccattttggtacaattttt--gacaactttttctctcatactca 22331427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 33100807 - 33100873
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||||||  ||||  ||||| ||||| ||||||||||||||| ||||||||||    
T  33100807 agagaaatgatatttgaacaaccattttt--tacaacttttttgacaactttctctctcatactcacat 33100873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 39669804 - 39669883
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||| ||||||||  |||||||||| ||||||||||  | | ||| |||||| |||||||||||    
T  39669804 tagagaaatgatatttgtacaa-ccattttgtgacaatttttt-gacaactttcaatttcatattcacataatgttattatc 39669883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 490
Target Start/End: Complemental strand, 49699823 - 49699752
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||||||| |||||   | ||||||||  |||||||||| ||||||||||||||||||||    
T  49699823 gagaaatgatatttgtacaacc-attttatgataatttttta-acaactttctttcttatactcacatgatgtt 49699752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 51250346 - 51250283
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||||||||| |||||  |||| ||||||| |||||||||||||| ||||||||    
T  51250346 gagaaatgatatttgtacaacc-attttaatacagttttttg-acaactttctctctcatactcac 51250283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 1100216 - 1100282
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| |||||| |||||||||||| | ||||||||||    
T  1100216 agagaaatgatatttgtacaa-ccatttttgtacaa-tttttgtacaactttctctatcatactcacat 1100282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 8350268 - 8350199
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| |||||||||||||    
T  8350268 agagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacatgat 8350199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 15059642 - 15059705
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| |||||  |||||  |||| ||||||||||||||| ||||||||||    
T  15059642 aaatgatatttgtacaacc-attttattacaaaatttttgacaactttctctctcatactcacat 15059705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 411 - 495
Target Start/End: Complemental strand, 20288417 - 20288334
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||| ||||||||||||||||||| || |||| |  |||| ||||| ||||||||||||||| |||||||| | ||||| ||||    
T  20288417 tttattgagaaatgatatttgtacatccaattt-gtgacaactttttagacaactttctctctcatactcacgttatgtttttat 20288334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 27352629 - 27352695
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  | ||  |||||||||||||||||||| ||||||||||    
T  27352629 agagaaatgatatttgtacaa-ccattttgtgataa-cttttggacaactttctctctcatactcacat 27352695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 30535990 - 30536057
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | |||||   |||||||||  ||||||||||||||| ||||||||||    
T  30535990 agagaaatgatatttgtacaatc-attttttaacaatttttgtgacaactttctctctcatactcacat 30536057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 488
Target Start/End: Original strand, 42256459 - 42256529
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| ||||||  |||| |||  | |||||||||||||| ||||||||||||||    
T  42256459 agagaaatgatatttgtacaacc-attttgtgacaactttg-gtacaactttctctctcatactcacatgatg 42256529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 649768 - 649834
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| |||||| |||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  649768 gagaaatgatatttgaacaacc-atttttttacaacttttgtgacaactttctctctcatactcacat 649834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 9567034 - 9566960
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| |||||||||| |||||    
T  9567034 tagagaaatgatatttgaacaacc-attttttgacaacttttgtgacaactttctctctcatactcacattatgtt 9566960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 11038261 - 11038338
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||| ||||||| |||||| || ||||||| | |||||||||||| | |||||||||| ||||| ||||    
T  11038261 agagaaatgatatttatacaacc-attttggtataattttt-gtacaactttctctttcatactcacattatgtttttat 11038338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 520 - 579
Target Start/End: Complemental strand, 29362662 - 29362603
Alignment:
Q  520 cattgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    |||||||||||| |||| | ||||||| ||| |||||||||||| |||||||| ||||||    
T  29362662 cattgtttttgaccaataagaagagagaaaaacaaagttgtcatggaatggatatacaaa 29362603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 34941995 - 34941926
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| | | ||||||  ||||||||| | |||||||||||||| ||||||||||    
T  34941995 tatagagaaatgatatttgtactatc-attttgtgacaatttttag-acaactttctctctcatactcacat 34941926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 46281436 - 46281502
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||  ||||||  | |||||||  ||||||||||||||| ||||||||||    
T  46281436 gagaaatgatatttgtacaact-attttgtaataatttttgtgacaactttctctctcatactcacat 46281502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 416 - 487
Target Start/End: Complemental strand, 48983740 - 48983670
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||| |||||| |||||   |||| ||||  ||||||||||||||| |||||||||||||    
T  48983740 agagaaatgatatttgaacaacc-attttttgacaacttttgtgacaactttctctctcatactcacatgat 48983670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 49621363 - 49621428
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||  | ||||||| | |||||||||||||| ||||||||||    
T  49621363 gagaaatgatatttgtacaacc-attttgtaataatttttag-acaactttctctctcatactcacat 49621428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 490
Target Start/End: Original strand, 11812386 - 11812458
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||| |||||||| | ||||||  ||||||||||| |||||||| | ||| ||||||||||||||||    
T  11812386 agagaaatgatagttgtacaatc-attttgtgacaattttttg-acaactttatttctcatactcacatgatgtt 11812458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 484
Target Start/End: Original strand, 18959005 - 18959069
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||| ||||| |||||||| ||||| ||||| ||||| ||||||||| ||||||||||    
T  18959005 agaaatgatatttatacaa-ccattttgttacaacttttt-gacaattttctctctcatactcacat 18959069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 30439249 - 30439315
Alignment:
Q  416 agagaaatgatatttgtacaacccattt-tgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||| ||  |||||||||| ||||||||| ||||| ||||||||||    
T  30439249 agagaaatgatatttgtacaaccaatttatg--acaatttttt-gacaactttatctctcatactcacat 30439315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 418 - 484
Target Start/End: Complemental strand, 36231776 - 36231712
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||  ||||| ||| | |||||||||||||| ||||||||||    
T  36231776 agaaatgatatttgtacaacc-attttgtgacaatatttag-acaactttctctctcatactcacat 36231712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 481
Target Start/End: Complemental strand, 50017496 - 50017432
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||||| | |||||  ||||| ||||| ||||||||||||||| |||||||    
T  50017496 tagagaaatgatatttgtacaa-caattttattacaacttttt-gacaactttctctctcatactca 50017432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 486
Target Start/End: Original strand, 5959388 - 5959455
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||| || ||||| ||  ||||  |||||||||||||||||||| ||||||||||||    
T  5959388 gagaaatgatatttgtataa-ccattatgtgacaa-cttttggacaactttctctctcatactcacatga 5959455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 490
Target Start/End: Original strand, 9445108 - 9445179
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||| |||||||| ||||||  |||| |||||| |||||||||||| | |||||||||| |||||    
T  9445108 gagaaatgatattcgtacaacc-attttgtaacaactttttg-acaactttctctttcatactcacattatgtt 9445179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 11897183 - 11897250
Alignment:
Q  426 tatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||| |||||| ||||| |||| | |||||||||||||| |||||||||| ||||| ||||    
T  11897183 tatttgtacaacc-attttggtacaactttt-gtacaactttctctctcatactcacattatgtttttat 11897250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 12999895 - 12999828
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| ||||||| |||  |  ||||| |||||||||||||| ||||||||||    
T  12999895 tagagaaatgatatttgtacaa-ccatttt-ctaacaacttttgtacaactttctctctcatactcacat 12999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 18541124 - 18541057
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||||   |||| ||||| ||||||||||||||| ||| ||||||    
T  18541124 tagagaaatgatatttgtacaa-ccattttctaacaacttttt-gacaactttctctctcatattcacat 18541057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 30530647 - 30530580
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| ||||||| ||||||  |||| |||| | |||||||||||||| ||||||||||    
T  30530647 tagagaaatgatatttatacaacc-attttgtgacaacttttag-acaactttctctctcatactcacat 30530580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 30973551 - 30973615
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||||||| ||||   |||||||||  ||||||||||||| | |||||||    
T  30973551 agagaaatgatatttgtacaaccc-ttttctaacaatttttgtgacaactttctctttcatactca 30973615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 484
Target Start/End: Complemental strand, 49446875 - 49446803
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||| |||||||||||||||||| |||| ||||||   ||||||||  ||||||||||||||| ||||| ||||    
T  49446875 tttaaagagaaatgatatttgtaaaacc-attttgtaccaatttttgtgacaactttctctctcatacttacat 49446803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 11097956 - 11097890
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| || ||||||  |||| |||| | |||||||||||||| ||||||||||    
T  11097956 agagaaatgatatttgtacatcc-attttgtgacaactttt-gaacaactttctctctcatactcacat 11097890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 11947794 - 11947861
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||   |||| ||||  ||||||||||||||| ||||| ||||    
T  11947794 agagaaatgatatttgtacaa-ccattttatgacaacttttgtgacaactttctctctcatactgacat 11947861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 18610772 - 18610838
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | ||||||  |||| |||||  |||||||||||||| ||||||||||    
T  18610772 agagaaatgatatttgtacaa-ctattttgtgacaacttttt-tacaactttctctctcatactcacat 18610838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 23645411 - 23645476
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||| ||||||||| ||||| ||||||||||    
T  23645411 gagaaatgatatttggacaaccattttt--tacaacttttttgacaactttatctctcatactcacat 23645476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 31436815 - 31436885
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||||| ||| |||   |||| ||||| ||||| ||||||||| ||||||||||    
T  31436815 ttatagagaaatgatatttgtacaa-ccactttctcacaacttttt-gacaattttctctctcatactcacat 31436885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 479
Target Start/End: Original strand, 31826948 - 31827011
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatact 479  Q
    |||||||| |||||||| |||||| |||||  ||||||||||  ||||||||||||||| |||||    
T  31826948 tagagaaaggatatttgaacaacc-atttttttacaatttttgtgacaactttctctctcatact 31827011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 37685331 - 37685396
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  37685331 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 37685396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 37700187 - 37700122
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  37700187 gagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 37700122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 484
Target Start/End: Complemental strand, 44519226 - 44519157
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||| || ||||||  |||||  |||| ||||  ||||||||||||||||||||| ||||    
T  44519226 tatagagaaatgatatatgaacaaccatttttg--acaacttttatgacaactttctctcttatacttacat 44519157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 480
Target Start/End: Complemental strand, 50226951 - 50226889
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactc 480  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||||||| ||||||    
T  50226951 agagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaactttctctctcatactc 50226889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 9427 - 9507
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga-tgttattatc 496  Q
    |||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||| |||||||||||| ||||||||||    
T  9427 tagagaaatgatatttgtacaa-ccattttgctacaatttttt-aacaactttgtctctcatactcacatgattgttattatc 9507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 46; Significance: 6e-17; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 411 - 496
Target Start/End: Complemental strand, 2303 - 2220
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||| ||||||||||||||||||||| | ||||||||| ||||||||| | || |||||||||||||||||||| |||||||||||    
T  2303 tttaaagagaaatgatatttgtacaatc-attttgctataattttttg-ataattttctctcttatactcacatcatgttattatc 2220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 525 - 561
Target Start/End: Complemental strand, 2191 - 2155
Alignment:
Q  525 tttttgatcaattaaaagagaggaaaccaaagttgtc 561  Q
    |||||||||||| ||||||||||||| ||||||||||    
T  2191 tttttgatcaatcaaaagagaggaaaacaaagttgtc 2155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 6e-17; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 27540013 - 27540092
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||| |||||||||||||  |||||||||||| |||||| |||||||| ||||| ||||||||||||||||||||||    
T  27540013 tagagaaatcatatttgtacaaca-attttgctacaactttttg-acaactttttctctcatactcacatgatgttattatc 27540092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 496
Target Start/End: Complemental strand, 44484729 - 44484650
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||||||||| ||||||  ||||||||| | |||||||||||||| |||||||||||||||| |||||    
T  44484729 tagagaaatgatatttgtacaacc-attttgtaacaattttt-gtacaactttctctctcatactcacatgatgttcttatc 44484650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 416 - 495
Target Start/End: Complemental strand, 6851731 - 6851654
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| |  |||||||||||| |||||| |||||||||||||| |||||||||||||||| ||||    
T  6851731 agagaaatgatatttgtacatct-attttgctacaactttttg-acaactttctctctcatactcacatgatgttgttat 6851654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 416 - 496
Target Start/End: Original strand, 1298193 - 1298271
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||| |||| ||||||||| ||||||||| |||| ||||||||| ||||| | ||||||||||||||    
T  1298193 agagaaatgatatttgtagaacc-attttgctataattttttg-acaattttctctctcatacttatatgatgttattatc 1298271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 418 - 496
Target Start/End: Complemental strand, 33030173 - 33030096
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||||||||  | |||||||| |||||||||||||||  |||||| |||||  |||||||    
T  33030173 agaaatgatatttgtacaacccattttgtgataatttttt-gacaactttctctctcgtactcatatgatactattatc 33030096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 413 - 487
Target Start/End: Complemental strand, 36909918 - 36909846
Alignment:
Q  413 tatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||||||||||||| ||||||  |||| |||| |||||||||||||||  |||||||||||||    
T  36909918 tatagagaaatgatatttgtacaacc-attttgtgacaactttt-ggacaactttctctcacatactcacatgat 36909846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 418 - 495
Target Start/End: Original strand, 34373006 - 34373081
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||||||| |||||| || ||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  34373006 agaaatgatatttgtacaacc-attttggtataattttt-gtacaactttctctctcatactcacattatgtttttat 34373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 5031922 - 5031989
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||||||||  |||| ||||  ||||||||||||||| ||||||||||    
T  5031922 agagaaatgatatttgtacaa-ccattttgtaacaacttttgcgacaactttctctctcatactcacat 5031989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 7498063 - 7497997
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||  ||||| |||||| |||||||||||||| ||||||||||    
T  7498063 agagaaatgatatttgtacaacc-attttattacaactttttg-acaactttctctctcatactcacat 7497997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 34144623 - 34144553
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| |||| |  ||||||||| | |||||||||||||| ||||||||||||||    
T  34144623 agagaaatgatatttgtacaaccaattt-gtgacaattttt-gtacaactttctctctcatactcacatgatg 34144553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 35171298 - 35171228
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||||||||||||| ||||||  ||||||||  | |||||||||||||| ||||||||||||||    
T  35171298 agagaaatgatatttgtacaacc-attttgtgacaattttg-gtacaactttctctctcatactcacatgatg 35171228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 411 - 495
Target Start/End: Original strand, 38021350 - 38021432
Alignment:
Q  411 tttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||| |||||||||||||||||||||  |||||  || ||||||||| |||||||||| ||| ||||| |||||||||||||||    
T  38021350 tttattgagaaatgatatttgtacaact-attttagtataattttttg-acaactttctttctcatacttacatgatgttattat 38021432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 479
Target Start/End: Complemental strand, 30413798 - 30413737
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatact 479  Q
    ||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||| |||||    
T  30413798 agagaaatgatatttgtacaa-ccattttgctacaacttttt-gacaactttatctctcatact 30413737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 416 - 495
Target Start/End: Original strand, 40721770 - 40721847
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||| || |||||| ||||| |||| | |||||||||||||| |||||||||| ||||| ||||    
T  40721770 agagaaatgatatttgtacagcc-attttggtacaactttt-gtacaactttctctctcatactcacattatgtttttat 40721847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 6328667 - 6328743
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||||||||||| |||||| || ||||||| | |||||||||||||| ||| |||||| ||||| ||||    
T  6328667 gagaaatgatatttgtacaacc-attttggtataattttt-gtacaactttctctctcatattcacattatgtttttat 6328743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 521 - 579
Target Start/End: Complemental strand, 6851628 - 6851570
Alignment:
Q  521 attgtttttgatcaattaaaagagaggaaaccaaagttgtcattgaatggatttacaaa 579  Q
    ||||||||||| |||| ||||||||| ||| ||||||||||||| ||||||| ||||||    
T  6851628 attgtttttgaccaatcaaaagagagaaaaacaaagttgtcattaaatggatgtacaaa 6851570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 481
Target Start/End: Original strand, 11442670 - 11442734
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    |||||||||||||||||||||| ||||||   ||||||||||| ||||||||||||||| |||||||    
T  11442670 tagagaaatgatatttgtacaa-ccatttcattacaatttttt-gacaactttctctctcatactca 11442734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 25094352 - 25094428
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||||||||||||| |||| |||||| |||||||||| | |||||||||||||| ||| |||||| ||||| ||||    
T  25094352 gagaaatgatatttgtataacc-attttggtacaattttt-gtacaactttctctctcatattcacattatgtttttat 25094428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 417 - 486
Target Start/End: Complemental strand, 9695132 - 9695065
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||||| ||||| ||  | || ||||||||||||||||||||| ||||||||||||    
T  9695132 gagaaatgatatttgtacaa-ccattatgagataa-tttttggacaactttctctctcatactcacatga 9695065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 496
Target Start/End: Original strand, 36383460 - 36383539
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    ||||||||||||||||||||||   ||||||  |||| |||| | |||||||||||||| |||||||||||||||| |||||    
T  36383460 tagagaaatgatatttgtacaaag-attttgtgacaactttt-gtacaactttctctctcatactcacatgatgttcttatc 36383539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 412 - 484
Target Start/End: Complemental strand, 546461 - 546391
Alignment:
Q  412 ttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||||| ||| |||  ||||| |||||  |||||||||||||| ||||||||||    
T  546461 ttatagagaaatgatatttgtacaa-ccactttattacaacttttt-aacaactttctctctcatactcacat 546391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 1889146 - 1889212
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||   ||||||||||| |||||||||||||| ||||||||||    
T  1889146 agagaaatgatatttgtacaacc-actttctgacaattttttg-acaactttctctctcatactcacat 1889212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 418 - 490
Target Start/End: Complemental strand, 7502498 - 7502427
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||||||||||||||||| |||||   |||||||||  ||||||||||||||| ||||||| || |||||    
T  7502498 agaaatgatatttgtacaacc-attttttgacaatttttgtgacaactttctctctcatactcatataatgtt 7502427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 9990691 - 9990756
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| |||||  |||||  ||||| ||||  ||||||||||||||||||||||||||    
T  9990691 gagaaatgatatttgaacaactaatttt--tacaacttttgtgacaactttctctcttatactcacat 9990756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 15283322 - 15283256
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | ||||  ||||||||| | |||||||||||||| ||||||||||    
T  15283322 agagaaatgatatttgtacaacc-actttgtgacaatttttag-acaactttctctctcatactcacat 15283256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 22888892 - 22888827
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  |||||  |||||||||  ||||||||||||||| ||||||||||    
T  22888892 gagaaatgatatttgaacaaccatttttg--acaatttttgtgacaactttctctctcatactcacat 22888827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 30339992 - 30340058
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  |||||  ||||| |||||||||||||| ||||||||||    
T  30339992 agagaaatgatatttgtacaa-ccatttttgtacaa-cttttgtacaactttctctctcatactcacat 30340058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 33857217 - 33857285
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgcta-caattttttggacaactttctctcttatactcacatgat 487  Q
    |||||||||||||||||||| |  |||| ||| |||||||||| |||||||||||||| |||||||||||||    
T  33857217 gagaaatgatatttgtacaatc--tttttctaacaattttttg-acaactttctctctcatactcacatgat 33857285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 488
Target Start/End: Complemental strand, 42141666 - 42141596
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatg 488  Q
    ||||||||||||| |||||||||  |||| | |||| |||| |||||||||||||||| ||||||||||||||    
T  42141666 agagaaatgatatatgtacaaccattttttc-acaactttt-ggacaactttctctctcatactcacatgatg 42141596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 460 - 496
Target Start/End: Original strand, 45372517 - 45372553
Alignment:
Q  460 acaactttctctcttatactcacatgatgttattatc 496  Q
    |||| ||||||||||||||||||||||||||||||||    
T  45372517 acaattttctctcttatactcacatgatgttattatc 45372553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 519 - 562
Target Start/End: Complemental strand, 12175299 - 12175256
Alignment:
Q  519 tcattgtttttgatcaattaaaagagaggaaaccaaagttgtca 562  Q
    ||||||||||||| |||| ||||||||||||| |||||||||||    
T  12175299 tcattgtttttgaccaatcaaaagagaggaaaacaaagttgtca 12175256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 496
Target Start/End: Complemental strand, 12175391 - 12175322
Alignment:
Q  425 atatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||  ||||||||| || |||||| |||||||| ||||| ||||||| ||||||||||||||    
T  12175391 atatttgtacaact-attttgctataactttttg-acaactttatctctcatactcatatgatgttattatc 12175322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 490
Target Start/End: Complemental strand, 14499097 - 14499023
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    ||||||| |||||||||||||||| |||||   |||||||||  ||||| |||||||| ||||||||||| |||||    
T  14499097 tagagaattgatatttgtacaacc-attttataacaatttttgtgacaattttctctcatatactcacattatgtt 14499023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 25881544 - 25881610
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||| |  ||||||| |||||||||  ||||||||||||||| ||||||||||    
T  25881544 gagaaatgatatttgaacatct-attttgcgacaatttttgtgacaactttctctctcatactcacat 25881610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 31635881 - 31635816
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| |||||   |||| |||||| |||||||||||||| ||||||||||    
T  31635881 gagaaatgatatttgtacaacc-attttctaacaactttttg-acaactttctctctcatactcacat 31635816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 32688615 - 32688550
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||| | |||   ||||||||||| |||||||||||||| ||||||||||    
T  32688615 gagaaatgatatttgtacaacc-actttctgacaattttttg-acaactttctctctcatactcacat 32688550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Complemental strand, 36587539 - 36587474
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||| |||||| |||||   ||||||||||| |||||||||||||| ||||||||||    
T  36587539 gagaaatgatatttgaacaacc-attttttgacaattttttg-acaactttctctctcatactcacat 36587474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 11728192 - 11728116
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||| ||||||||||| |||||| ||||| |||| | |||||||||||| | |||||||||| ||||| ||||    
T  11728192 gagaaatgatgtttgtacaacc-attttggtacaactttt-gtacaactttctctttcatactcacattatgtttttat 11728116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 13466147 - 13466081
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||  || ||||||||||  |||||||||||||| ||||||||||    
T  13466147 agagaaatgatatttgtacaaccaattt--ctaacaatttttt-aacaactttctctctcatactcacat 13466081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 13850255 - 13850179
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    |||||||||||||| ||||| | |||||| || ||||||| | |||||||||||||| |||||||||| ||||| ||||    
T  13850255 gagaaatgatatttatacaatc-attttgatataattttt-gtacaactttctctctcatactcacattatgtttttat 13850179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 14797722 - 14797656
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgct-acaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||||  || |||| ||||| ||||||||||||||| ||||||||||    
T  14797722 agagaaatgatatttgtacaaccaattt--ctaacaacttttt-gacaactttctctctcatactcacat 14797656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 18254282 - 18254215
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||||  ||||  ||||| ||||  ||||||||||||||| ||||||||||    
T  18254282 tagagaaatgatatttgaacaaccattttt--tacaacttttgtgacaactttctctctcatactcacat 18254215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 416 - 486
Target Start/End: Original strand, 29168724 - 29168792
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||||||||| |||||   |||| |||| | |||||||||||||| ||||||||||||    
T  29168724 agagaaatgatatttgtacaacc-attttttgacaactttt-gcacaactttctctctcatactcacatga 29168792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 454 - 488
Target Start/End: Original strand, 29893645 - 29893679
Alignment:
Q  454 ttttggacaactttctctcttatactcacatgatg 488  Q
    ||||| |||||||||||||||||||||||||||||    
T  29893645 ttttgtacaactttctctcttatactcacatgatg 29893679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 5167814 - 5167746
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaa-ttttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  |||| |||||| ||||| ||||||||| ||||||||||    
T  5167814 agagaaatgatatttgtacaa-ccactttgtgacaatttttttagacaattttctctctcatactcacat 5167746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 6336251 - 6336315
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||||||||||||| |||||||   |||| ||||  ||||||||||||||| |||||||    
T  6336251 agagaaatgatatttgtacaa-ccattttctaacaacttttgtgacaactttctctctcatactca 6336315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 9760017 - 9760083
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttg-gacaactttctctcttatactcacat 484  Q
    ||||||||||||||| ||||||  ||||  ||||| |||||| ||||||||||||||| ||||||||||    
T  9760017 gagaaatgatatttgaacaaccattttt--tacaactttttgtgacaactttctctctcatactcacat 9760083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 485
Target Start/End: Original strand, 9979095 - 9979163
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatg 485  Q
    |||||||||||||||||||||||  |||| | |||||||||  ||||||  ||||||| |||||||||||    
T  9979095 agagaaatgatatttgtacaaccactttttc-acaatttttgtgacaaccatctctctcatactcacatg 9979163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Complemental strand, 12784470 - 12784406
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    |||||||||||||||||||| |||||||   | |||||||  ||||||||||||||| ||||||||    
T  12784470 gagaaatgatatttgtacaa-ccattttataataatttttgtgacaactttctctctcatactcac 12784406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 490
Target Start/End: Original strand, 17826052 - 17826122
Alignment:
Q  418 agaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgtt 490  Q
    |||||||||||||||||||||  || ||  |||| |||| ||| |||||||||||| ||||||| ||||||||    
T  17826052 agaaatgatatttgtacaaccatttgtg--acaacttttaggataactttctctctcatactcatatgatgtt 17826122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 496
Target Start/End: Complemental strand, 30192424 - 30192345
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||||||||| ||| | |||||| || || |||||| |||| ||||||||| ||||||||||||| || |||||    
T  30192424 tagagaaatgatatttgttcaatc-attttg-taaaaatttttgaacaattttctctctcatactcacatgatatttttatc 30192345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 417 - 482
Target Start/End: Original strand, 34249580 - 34249643
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    ||||||||||||||||||||||  |||  | |||| |||||| |||||||||||||||||||||||    
T  34249580 gagaaatgatatttgtacaaccactttctc-acaactttttg-acaactttctctcttatactcac 34249643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 484
Target Start/End: Original strand, 43057062 - 43057130
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||| ||||||  ||||   |||| ||||  ||||||||||||||||||||||||||    
T  43057062 tagagaaatgatatttgaacaaccacttttta-acaacttttgtgacaactttctctcttatactcacat 43057130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 6666019 - 6666085
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| |||||||  ||||| |||||  || ||||||||||| ||||||||||    
T  6666019 agagaaatgatatttgtacaa-ccattttattacaacttttt-tacgactttctctctcatactcacat 6666085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 484
Target Start/End: Original strand, 6895925 - 6895961
Alignment:
Q  448 acaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||  ||||||||||||||||||||||||||    
T  6895925 acaatttttgtgacaactttctctcttatactcacat 6895961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 414 - 482
Target Start/End: Original strand, 14871637 - 14871704
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcac 482  Q
    ||||||||||||||||||||||| |||||||  ||||||||||   |||||| |||||| || ||||||    
T  14871637 atagagaaatgatatttgtacaa-ccattttcttacaatttttgaaacaactatctctcatacactcac 14871704  T

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Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 27529528 - 27529594
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||| ||||  ||||| ||||| |||| | |||||||||||| ||||||||||||    
T  27529528 agagaaatgatatttgtagaaccatttttg-tacaactttt-gtacaactttctctattatactcacat 27529594  T

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Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 32749997 - 32750063
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||  |||| | |||| ||||| |||||||||| |||| ||||||||||    
T  32749997 agagaaatgatatttgtacaaccactttttc-acaacttttt-gacaactttccctctgatactcacat 32750063  T

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Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 448 - 484
Target Start/End: Complemental strand, 34431868 - 34431832
Alignment:
Q  448 acaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||  ||||||||||||||||||||||||||    
T  34431868 acaatttttgtgacaactttctctcttatactcacat 34431832  T

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Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 457
Target Start/End: Complemental strand, 35792699 - 35792660
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaatttttt 457  Q
    |||||||||||||||||||| |||||||| |||||||||||    
T  35792699 gagaaatgatatttgtacaa-ccattttgttacaatttttt 35792660  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 420 - 484
Target Start/End: Original strand, 35965578 - 35965640
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||| | |||  |||||||||||| |||||||||||| | ||||||||||    
T  35965578 aaatgatatttgtacaacc-actttattacaattttttg-acaactttctctttcatactcacat 35965640  T

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Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 36132973 - 36133039
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  |||||||| | ||||||||| ||||| ||||||||||    
T  36132973 agagaaatgatatttgtacaa-ccactttgtgacaattttgt-gacaactttatctctcatactcacat 36133039  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 42665884 - 42665818
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| | | |||  ||||| |||||| |||||||||||||| ||||||||||    
T  42665884 agagaaatgatatttgtacaatc-actttattacaactttttg-acaactttctctctcatactcacat 42665818  T

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Target: scaffold0651 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 484
Target Start/End: Complemental strand, 4919 - 4852
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||||||| |||||| |||||||||| | |||||||||||||| ||||||||||    
T  4919 tagagaaatgatatttgtacaacc-attttggtacaattttt-gtacaactttctctctcatactcacat 4852  T

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Target: scaffold0014 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 199265 - 199331
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| | |||  |||||||||||| |||||||||||||| ||||||||||    
T  199265 agagaaatgatatttgtacaacc-actttattacaattttttg-acaactttctctctcatactcacat 199331  T

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Target: scaffold0014; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 484
Target Start/End: Original strand, 145058 - 145126
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| |||||||  |||||  ||||| ||||| |||||||| ||||||||||    
T  145058 atagagaaatgatatttgtacaa-ccatttttgtacaa-cttttgtacaacattctctctcatactcacat 145126  T

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Target: scaffold0504 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 414 - 484
Target Start/End: Complemental strand, 10809 - 10741
Alignment:
Q  414 atagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||||| ||| |||  ||||||||||| ||||||||| ||||| ||||||||||    
T  10809 atagagaaatgatatttgtacaa-ccactttattacaatttttt-gacaactttttctctcatactcacat 10741  T

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Target: scaffold0111 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 409 - 495
Target Start/End: Complemental strand, 36945 - 36861
Alignment:
Q  409 tgtttatagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattat 495  Q
    ||||||| ||||||||||||||| |||||| | |||  ||||| |||||| |||||||||||||||||| |||||| || |||||||    
T  36945 tgtttattgagaaatgatatttgcacaacc-actttattacaactttttg-acaactttctctcttatattcacattatattattat 36861  T

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Target: scaffold0204 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 484
Target Start/End: Original strand, 27338 - 27404
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||| |||||| || ||||||  ||||||||||| |||||||||||||| ||||||||||    
T  27338 agagaaatgatatatgtacatcc-attttgtgacaattttttg-acaactttctctctcatactcacat 27404  T

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Target: scaffold0020 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 484
Target Start/End: Original strand, 155906 - 155971
Alignment:
Q  417 gagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    |||||||||||||||||||| |||||||  ||||| ||||| |||||||||||||||  |||||||||    
T  155906 gagaaatgatatttgtacaa-ccattttattacaacttttt-gacaactttctctctcgtactcacat 155971  T

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Target: scaffold0019 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 486
Target Start/End: Original strand, 72364 - 72433
Alignment:
Q  415 tagagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatga 486  Q
    |||||||||||||||||||||| ||||||||| ||||  ||||| |||| ||||||||| ||| ||||||||    
T  72364 tagagaaatgatatttgtacaa-ccattttgcaacaa-cttttgaacaattttctctctcatattcacatga 72433  T

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Target: scaffold0522 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0522
Description:

Target: scaffold0522; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 453 - 486
Target Start/End: Complemental strand, 2541 - 2508
Alignment:
Q  453 tttttggacaactttctctcttatactcacatga 486  Q
    ||||||||||||||||||||| ||||||||||||    
T  2541 tttttggacaactttctctctcatactcacatga 2508  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 496
Target Start/End: Complemental strand, 31366 - 31294
Alignment:
Q  420 aaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacatgatgttattatc 496  Q
    |||||||||||| |||||| ||||||  |||| |||| |||||||||||||||  |||||||||||||||| |||||    
T  31366 aaatgatatttggacaacc-attttgtaacaactttt-ggacaactttctctc--atactcacatgatgttcttatc 31294  T

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Target: scaffold0053 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 481
Target Start/End: Original strand, 12496 - 12560
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactca 481  Q
    ||||||||||| |||||| |||| |||||   |||||||||  |||||||||||||||||||||||    
T  12496 agagaaatgatctttgtataacc-attttctaacaatttttgtgacaactttctctcttatactca 12560  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 416 - 484
Target Start/End: Complemental strand, 219736 - 219670
Alignment:
Q  416 agagaaatgatatttgtacaacccattttgctacaattttttggacaactttctctcttatactcacat 484  Q
    ||||||||||||||||||||| ||| ||||  |||| ||||| ||||||||||| ||||||| ||||||    
T  219736 agagaaatgatatttgtacaa-ccactttgtgacaacttttt-gacaactttctttcttatattcacat 219670  T

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