View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5742_high_20 (Length: 315)

Name: NF5742_high_20
Description: NF5742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5742_high_20
NF5742_high_20
[»] chr3 (50 HSPs)
chr3 (20-301)||(41613196-41613478)
chr3 (20-299)||(20351467-20351747)
chr3 (20-301)||(20916945-20917227)
chr3 (20-301)||(20925907-20926189)
chr3 (20-301)||(44230564-44230846)
chr3 (20-301)||(49195394-49195676)
chr3 (21-297)||(48563794-48564071)
chr3 (20-301)||(17567024-17567307)
chr3 (20-301)||(42757014-42757295)
chr3 (20-247)||(49268251-49268479)
chr3 (20-301)||(16611945-16612212)
chr3 (20-301)||(22047041-22047308)
chr3 (198-301)||(47073132-47073235)
chr3 (20-293)||(597763-598022)
chr3 (198-301)||(52390314-52390417)
chr3 (10-301)||(36128450-36128744)
chr3 (197-281)||(48889740-48889824)
chr3 (20-134)||(50963820-50963935)
chr3 (198-299)||(3976751-3976852)
chr3 (20-115)||(3976569-3976665)
chr3 (198-299)||(4007276-4007378)
chr3 (24-293)||(2273857-2274130)
chr3 (197-281)||(30254948-30255032)
chr3 (20-115)||(42166026-42166122)
chr3 (20-115)||(52390503-52390599)
chr3 (202-301)||(50997045-50997144)
chr3 (20-137)||(50216029-50216147)
chr3 (198-281)||(29009921-29010004)
chr3 (20-134)||(47073302-47073417)
chr3 (200-301)||(50215864-50215963)
chr3 (20-115)||(29009739-29009835)
chr3 (200-273)||(46390014-46390087)
chr3 (20-99)||(30255134-30255213)
chr3 (198-273)||(34046437-34046512)
chr3 (198-273)||(42903126-42903201)
chr3 (198-273)||(49143399-49143474)
chr3 (198-273)||(50479743-50479818)
chr3 (198-273)||(54387185-54387260)
chr3 (20-81)||(4007472-4007533)
chr3 (20-115)||(42903287-42903383)
chr3 (20-115)||(49143560-49143656)
chr3 (20-115)||(50479904-50480000)
chr3 (149-258)||(8731753-8731858)
chr3 (149-258)||(9083640-9083745)
chr3 (21-115)||(34046256-34046351)
chr3 (20-115)||(46389830-46389926)
chr3 (20-115)||(46701123-46701219)
chr3 (20-115)||(54387003-54387099)
chr3 (198-273)||(46700962-46701037)
chr3 (20-63)||(48889596-48889639)
[»] chr7 (38 HSPs)
chr7 (16-301)||(19798131-19798417)
chr7 (20-301)||(47777113-47777395)
chr7 (24-301)||(16677895-16678172)
chr7 (24-301)||(17652131-17652408)
chr7 (20-285)||(27452563-27452829)
chr7 (20-301)||(37341167-37341449)
chr7 (20-301)||(39461320-39461603)
chr7 (20-284)||(5540529-5540785)
chr7 (20-301)||(34739226-34739511)
chr7 (181-297)||(11635784-11635900)
chr7 (178-299)||(11635583-11635704)
chr7 (198-301)||(46739439-46739542)
chr7 (200-301)||(17836123-17836224)
chr7 (20-99)||(9493936-9494015)
chr7 (20-134)||(10517757-10517872)
chr7 (20-134)||(46739608-46739723)
chr7 (20-115)||(15073382-15073478)
chr7 (20-115)||(17835939-17836035)
chr7 (197-281)||(47672067-47672151)
chr7 (197-279)||(9493752-9493834)
chr7 (198-281)||(15073213-15073296)
chr7 (198-281)||(42507022-42507105)
chr7 (20-112)||(42507194-42507287)
chr7 (197-281)||(36978622-36978706)
chr7 (198-273)||(17462241-17462316)
chr7 (198-273)||(17590898-17590973)
chr7 (20-133)||(14689254-14689367)
chr7 (20-115)||(17462402-17462498)
chr7 (20-115)||(17590716-17590812)
chr7 (198-273)||(9370326-9370401)
chr7 (198-273)||(35609362-35609437)
chr7 (198-273)||(41881552-41881627)
chr7 (198-273)||(48404419-48404494)
chr7 (20-115)||(9370487-9370583)
chr7 (20-115)||(41881370-41881466)
chr7 (20-115)||(48404237-48404333)
chr7 (20-115)||(35609523-35609619)
chr7 (149-189)||(47672174-47672214)
[»] chr1 (36 HSPs)
chr1 (20-300)||(50342921-50343202)
chr1 (20-273)||(47503147-47503401)
chr1 (20-301)||(52802996-52803277)
chr1 (20-301)||(38126434-38126715)
chr1 (20-301)||(47656708-47656990)
chr1 (20-301)||(45825739-45826020)
chr1 (49-301)||(21141746-21142002)
chr1 (20-301)||(23275072-23275333)
chr1 (20-301)||(96865-97132)
chr1 (10-281)||(51321557-51321832)
chr1 (21-293)||(22525082-22525340)
chr1 (20-118)||(19156879-19156978)
chr1 (20-134)||(31782822-31782937)
chr1 (20-137)||(19525133-19525251)
chr1 (20-137)||(19525794-19525912)
chr1 (20-137)||(19526268-19526386)
chr1 (200-301)||(19524118-19524219)
chr1 (20-137)||(19524285-19524403)
chr1 (20-99)||(35258021-35258100)
chr1 (20-137)||(2424301-2424419)
chr1 (201-281)||(2366158-2366238)
chr1 (197-284)||(49856911-49856998)
chr1 (20-115)||(30890877-30890973)
chr1 (198-281)||(13638949-13639032)
chr1 (198-281)||(19157061-19157144)
chr1 (198-273)||(26876704-26876779)
chr1 (197-271)||(35257845-35257919)
chr1 (20-115)||(13639118-13639215)
chr1 (197-273)||(3731317-3731393)
chr1 (198-293)||(31782666-31782755)
chr1 (198-273)||(30891026-30891101)
chr1 (20-87)||(2366092-2366159)
chr1 (21-115)||(26876523-26876618)
chr1 (20-115)||(3731478-3731574)
chr1 (20-133)||(49857065-49857177)
chr1 (198-237)||(2424216-2424255)
[»] chr5 (25 HSPs)
chr5 (20-301)||(5197802-5198084)
chr5 (20-216)||(42538011-42538208)
chr5 (20-301)||(40623849-40624137)
chr5 (20-286)||(8701176-8701434)
chr5 (20-301)||(13740-14007)
chr5 (197-301)||(42941412-42941516)
chr5 (198-301)||(7758350-7758453)
chr5 (20-115)||(27672766-27672862)
chr5 (20-286)||(38968961-38969213)
chr5 (20-134)||(7758168-7758283)
chr5 (32-278)||(19227895-19228145)
chr5 (20-115)||(8579620-8579716)
chr5 (20-99)||(42941618-42941697)
chr5 (20-124)||(28877505-28877610)
chr5 (198-281)||(8579451-8579534)
chr5 (198-281)||(19040045-19040128)
chr5 (198-281)||(30706147-30706230)
chr5 (20-113)||(19040216-19040310)
chr5 (20-115)||(28240937-28241033)
chr5 (20-115)||(30705965-30706061)
chr5 (24-99)||(17659188-17659263)
chr5 (198-273)||(28240776-28240851)
chr5 (198-281)||(27672597-27672680)
chr5 (198-281)||(28877685-28877768)
chr5 (227-281)||(27972263-27972317)
[»] chr4 (43 HSPs)
chr4 (20-301)||(50194318-50194600)
chr4 (20-301)||(51684064-51684346)
chr4 (20-301)||(30704863-30705145)
chr4 (106-301)||(50022543-50022738)
chr4 (20-301)||(50902330-50902600)
chr4 (20-281)||(46437061-46437313)
chr4 (20-301)||(37021004-37021288)
chr4 (20-224)||(41932652-41932866)
chr4 (20-254)||(11083002-11083222)
chr4 (175-301)||(55406344-55406470)
chr4 (20-180)||(55406837-55406998)
chr4 (20-224)||(10752448-10752650)
chr4 (20-224)||(10966217-10966419)
chr4 (198-301)||(44678983-44679086)
chr4 (20-115)||(21022003-21022099)
chr4 (200-299)||(50275762-50275861)
chr4 (20-134)||(3184856-3184971)
chr4 (20-134)||(44679153-44679268)
chr4 (20-137)||(50275578-50275696)
chr4 (198-301)||(21021814-21021917)
chr4 (20-115)||(1088838-1088934)
chr4 (20-273)||(1308107-1308364)
chr4 (20-115)||(40357395-40357491)
chr4 (198-281)||(30725737-30725820)
chr4 (20-113)||(41798094-41798188)
chr4 (20-115)||(30725906-30726002)
chr4 (20-99)||(9892392-9892471)
chr4 (198-281)||(41797923-41798006)
chr4 (198-273)||(6180726-6180801)
chr4 (198-273)||(31422750-31422825)
chr4 (198-273)||(49091482-49091557)
chr4 (198-273)||(49166077-49166152)
chr4 (20-115)||(6180887-6180983)
chr4 (149-251)||(21537463-21537562)
chr4 (20-115)||(31422568-31422664)
chr4 (202-273)||(40357234-40357305)
chr4 (154-238)||(11049559-11049640)
chr4 (20-115)||(49165913-49166009)
chr4 (20-70)||(3185018-3185068)
chr4 (20-78)||(11049726-11049784)
chr4 (20-115)||(49091300-49091396)
chr4 (20-66)||(50022741-50022787)
chr4 (20-83)||(21537617-21537680)
[»] chr2 (25 HSPs)
chr2 (15-300)||(36655320-36655599)
chr2 (20-301)||(39948463-39948745)
chr2 (20-301)||(10827946-10828213)
chr2 (20-273)||(45429453-45429710)
chr2 (198-301)||(29400492-29400595)
chr2 (25-152)||(45136383-45136511)
chr2 (20-115)||(29400712-29400808)
chr2 (202-301)||(7187817-7187916)
chr2 (20-115)||(28469503-28469599)
chr2 (198-281)||(17421573-17421656)
chr2 (20-113)||(17421391-17421485)
chr2 (20-115)||(15831997-15832093)
chr2 (198-273)||(15832179-15832254)
chr2 (20-133)||(25514980-25515094)
chr2 (198-273)||(5353016-5353091)
chr2 (198-273)||(20931620-20931695)
chr2 (198-273)||(30495883-30495958)
chr2 (198-273)||(43538674-43538749)
chr2 (20-115)||(3939837-3939933)
chr2 (20-115)||(30496044-30496140)
chr2 (20-115)||(43979399-43979495)
chr2 (198-273)||(3939676-3939751)
chr2 (198-273)||(43979581-43979656)
chr2 (10-115)||(43538835-43538941)
chr2 (20-115)||(5352834-5352930)
[»] chr8 (39 HSPs)
chr8 (20-301)||(5303168-5303450)
chr8 (20-301)||(43188911-43189192)
chr8 (10-281)||(39845946-39846220)
chr8 (20-301)||(35552505-35552787)
chr8 (20-301)||(34821944-34822226)
chr8 (20-301)||(40076185-40076467)
chr8 (20-193)||(20858125-20858299)
chr8 (20-297)||(41249055-41249318)
chr8 (20-224)||(45128579-45128785)
chr8 (20-281)||(37327686-37327942)
chr8 (20-285)||(5677899-5678156)
chr8 (20-301)||(39252862-39253147)
chr8 (20-301)||(39938144-39938429)
chr8 (198-301)||(34369478-34369581)
chr8 (198-301)||(34370806-34370909)
chr8 (198-301)||(43212550-43212653)
chr8 (20-115)||(15035842-15035938)
chr8 (20-115)||(39602450-39602546)
chr8 (198-293)||(39602632-39602727)
chr8 (20-134)||(43212368-43212483)
chr8 (152-281)||(2985103-2985228)
chr8 (20-134)||(34369633-34369748)
chr8 (20-134)||(34370961-34371076)
chr8 (20-102)||(45065095-45065177)
chr8 (20-115)||(42484697-42484793)
chr8 (199-281)||(45065237-45065319)
chr8 (200-281)||(15035673-15035754)
chr8 (198-273)||(24474-24549)
chr8 (198-273)||(488655-488730)
chr8 (198-273)||(1053586-1053661)
chr8 (198-273)||(23021257-23021332)
chr8 (198-273)||(26660508-26660583)
chr8 (198-273)||(42484536-42484611)
chr8 (20-115)||(488816-488912)
chr8 (20-115)||(1053404-1053500)
chr8 (20-115)||(23021418-23021514)
chr8 (20-115)||(26660326-26660422)
chr8 (20-115)||(24635-24731)
chr8 (20-66)||(2984982-2985028)
[»] chr6 (15 HSPs)
chr6 (20-301)||(6319492-6319774)
chr6 (20-276)||(24722732-24722989)
chr6 (200-284)||(24087695-24087779)
chr6 (20-113)||(27617595-27617689)
chr6 (20-99)||(24087884-24087963)
chr6 (198-281)||(27617777-27617860)
chr6 (198-273)||(6202210-6202285)
chr6 (198-273)||(11689177-11689252)
chr6 (198-273)||(22302242-22302317)
chr6 (198-273)||(30828588-30828663)
chr6 (20-115)||(6202028-6202124)
chr6 (20-115)||(11688995-11689091)
chr6 (20-115)||(22302060-22302156)
chr6 (20-115)||(30828749-30828845)
chr6 (149-190)||(21601435-21601476)
[»] scaffold0238 (1 HSPs)
scaffold0238 (24-301)||(17884-18162)
[»] scaffold0180 (2 HSPs)
scaffold0180 (20-134)||(14717-14832)
scaffold0180 (198-239)||(14609-14650)
[»] scaffold0155 (1 HSPs)
scaffold0155 (20-133)||(11124-11238)


Alignment Details
Target: chr3 (Bit Score: 227; Significance: 1e-125; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 41613196 - 41613478
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  41613196 gatccacccaagatgattggtggtaggcctgcgatgactcagagccaccggagggagaggcaaagcggccacatcccaaagaggggtagaggtcggatgg 41613295  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||  ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41613296 tggatagttcagggagttcgcaggaggcttctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtagagtacctgaattatca 41613395  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41613396 ggatcatgtacaccacgatgttactgatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 41613478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 20351467 - 20351747
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||||| ||||  |||||||||| ||    
T  20351467 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccacctgagggagaggcaaagcggccacatcccaaagaggggaagaggtcggaggg 20351566  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  20351567 tggatggttcagggagttcgcaggaagcttctcaggctacacagcctgaagagtcgcaggtggttgatccaagccagcaggtggagtacctgaattatca 20351666  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatga 299  Q
     |||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |||||||||    
T  20351667 ggatcaggtacaccatgatgttacggatggtgggtatgactaggatcatataccaaagcagcaacatatagcagatgatga 20351747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 20917227 - 20916945
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  |||||||| | ||    
T  20917227 gatccatctaagatgattgctggtaggcgtgcgatgactcagagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcgaaggg 20917128  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20917127 tggatggttcagggacttcgcatgaggcttctcaggctacacaacctgaagagtcgcaggtggttgatccgagccaggaggtggagtacctgaattatca 20917028  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  20917027 ggatcaggtacaccatgatgttacggatggtgggtatgaccagaatcatataccagagcagcaacatatagcagatgatgatg 20916945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 20926189 - 20925907
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||||||||||| ||||||||||| ||||  |||||||| | ||    
T  20926189 gatccatctaagatgattgctggtaggcgtgcgatgactcagagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcgaaggg 20926090  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| | |||||| ||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  20926089 tggatggttcagggacttcgcatgaggcttctcaggctacacaacctgaagagtcgcaggtggttgatccgagccaggaggtggagtacctgaattatca 20925990  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||    
T  20925989 ggatcaggtacaccatgatgttacggatggtgggtatgaccagaatcatataccagagcagcaacatatagcagatgatgatg 20925907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 44230564 - 44230846
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| ||||||| |||| |||  || |||||||| ||| |||||||||||||||||||||| ||||||||||| ||||  |||||||||| ||    
T  44230564 gatccatctaaaatgattgctggtcggcgagcaatgactcagagcaaccggagggagaggcaaagcgggcacatcccaaagaggggaagaggtcggaggg 44230663  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||    
T  44230664 tggatggttcagggagttcgtaggaggattctcaggctacacagcctgaagagtcgcatgtggttgatccgagccagcaggtggagtacctgaattatca 44230763  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||| | |||||||||    
T  44230764 ggatcaggtacaccacgatgttacggatggtgggtatgaccaagatcatataccagagtagcaacatatagcatatgatgatg 44230846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 49195676 - 49195394
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||| |||||||| |||||||||||| |||||||||| ||||||  ||||||| ||||||||||| ||||  |||||||||| ||    
T  49195676 gatccatctaagatgattgctggtaggcgtgcgatgactcagagccaccggaaggagagcgaaagcgggcacatcccaaagaggggaagaggtcggaggg 49195577  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49195576 tggatggttcagggagttcgcaggaggcttctcgggctacacagcctgaagagtcgcaggtggttgatccgagccagcaggtggagtacctgaattatca 49195477  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || |||||||| ||||||||||||||||||| |||| |||| ||| ||| |||||||||||    
T  49195476 ggatcaggtacaccacgatgtgaccgatggtggatatgaccaggatcatatactagaggagcagcatatagcagatgatgatg 49195394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 21 - 297
Target Start/End: Original strand, 48563794 - 48564071
Alignment:
Q  21 atccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggt 119  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||||||||||||||| ||||||||||| ||||  |||||||||| |||    
T  48563794 atccatctaagatgattggtggtaggcatgcgataactcaaagccaccggaaggagaggcaaagcgggcacatcccaaataggggaagaggtcggagggt 48563893  T
Q  120 ggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaa 219  Q
    ||||| |||| |||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||     
T  48563894 ggatggttcaaggagtttgcaggaggcttctcaggctacacaacctgaagagtcgcaggtggttgatctgagccagtaggtggagtacctgaattatcag 48563993  T
Q  220 gatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||| |||||||||||| || |||| ||||||||||||||||||||||||||||||||| ||| ||| |||||||    
T  48563994 gatcaggaacaccacgatgtgaccgatgatgggtatgaccaggatcatataccagagcagcagcatatagcagatgat 48564071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 17567307 - 17567024
Alignment:
Q  20 gatccatctaagatgattggtgg-taggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatg 117  Q
    |||||||||||||||||||| || ||||| |||||||||||| ||||||||||||||||| |||||||||||||||||||| |||| ||||||||||| |    
T  17567307 gatccatctaagatgattggggggtaggcgtgcgatgactcagagccaccggagggagagtcaaagcggccacatcccaaagaggggtagaggtcggagg 17567208  T
Q  118 gtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatc 217  Q
    ||||||| ||||||||||||| |||||||| ||||   |||||||||| |||||||  |||| ||||| |||||||| ||||||||||||||||||||||    
T  17567207 gtggatggttcagggagttcgcaggaggcttctcatattacacagcctaaagagtcataggtagttgacccgagccagcaggtggagtacctgaattatc 17567108  T
Q  218 aagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    | ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | || |||||||||| |||||||||||    
T  17567107 aggatcaggtacaccacgatgttacagatggtgggtatgaccaggatcatataccacaacaacaacatgtagaagatgatgatg 17567024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 42757014 - 42757295
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||| | ||  |||||||||| ||    
T  42757014 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagccaccggaaggagagacaaagcgggcacatcccaaagaagggaagaggtcggaggg 42757113  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||| ||||| ||||||||||||    
T  42757114 tggatggttcagggacttcgcaggaggctgctcaggctacagagcctgaagagtcgcaggtggttgatccgagccaggaggcggagt-cctgaattatca 42757212  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
      ||||||||||||||| ||| || |||||| |||||||||||||| |||||||||||||||| ||| ||| |||||||||||    
T  42757213 gaatcaggtacaccacgttgtgactgatggttggtatgaccaggattatataccagagcagcagcatatagcagatgatgatg 42757295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 49268479 - 49268251
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| ||    
T  49268479 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcggtcacatcccaaacaggggtagaggtcggaggg 49268380  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  49268379 tggatggttcagggagttcgcaggaggcttctcaggctacacagtctgaagagtcgcaggtggttgacccgagccagcaggtggagtacctgaattatca 49268280  T
Q  219 agatcaggtacaccacgatgttacggatg 247  Q
      |||| ||||||||||||||||||||||    
T  49268279 gcatcaagtacaccacgatgttacggatg 49268251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 16611945 - 16612212
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| ||||||| ||||||||||||||||| |||| || |||||||| ||    
T  16611945 gatccatctaagatgattagtggtaggcgtgcgatgactcagagccaccagaggcagaggcagagcggccacatcccaaagaggggtacaggtcggaggg 16612044  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||| ||            |||||||||||||||| | ||||| ||  |  |||| |  || |    |||||||||||||||||||||    
T  16612045 gagatggttcagggagctc------------tcaggctacacagcctaaggagtcacaacttattgacc--agtctgg-ggtggagtacctgaattatca 16612129  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  16612130 ggatcaggtacaccacgatgtgactgatggtgggtatgactaggatcatataccatagcagcagcatgtaggagacgatgatg 16612212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 22047308 - 22047041
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||| ||||||||| |||||||||||| ||||||| |||| ||||||| ||||||||||||||||| |||| || |||||||| ||    
T  22047308 gatccatctaagatgattagtggtaggcgtgcgatgactcagagccaccagaggcagaggcagagcggccacatcccaaagaggggtacaggtcggaggg 22047209  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||| ||            |||||||||||||||| | ||||| ||  |  |||| |  || |    |||||||||||||||||||||    
T  22047208 gagatggttcagggagctc------------tcaggctacacagcctaaggagtcacaacttattgacc--agtctgg-ggtggagtacctgaattatca 22047124  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || ||||||||||||||| |||||||||||||| ||||||| ||||||||||| |||||||    
T  22047123 ggatcaggtacaccacgatgtgactgatggtgggtatgactaggatcatataccatagcagcagcatgtaggagacgatgatg 22047041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 47073235 - 47073132
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||||||||||| ||| |||    
T  47073235 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcaacatgtagcagacgat 47073136  T
Q  298 gatg 301  Q
    ||||    
T  47073135 gatg 47073132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 293
Target Start/End: Original strand, 597763 - 598022
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||| |||||||||  ||||||||  | |||||||||||||||||||| |||| |||||||||||| |||| ||||||||||| ||    
T  597763 gatccatctaaaatgatttgtggtaggcgagcgatgacctagagccaccggagggagaggcagagcgcccacatcccaaagaggggtagaggtcggaggg 597862  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||||||            |||||||||||||| ||| ||||| |||||  || | |||        ||||||||||||||| |||||    
T  597863 gagatggttcagggagttc------------tcaggctacacagcttgaggagtcacaggttattcacccgtctgg---ggtggagtacctgaactatca 597947  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
     ||||||||||||||||||   || |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  597948 ggatcaggtacaccacgatacgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggaga 598022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 52390417 - 52390314
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||| ||||||||||| |||    
T  52390417 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacatcagcagcatgtaggagacgat 52390318  T
Q  298 gatg 301  Q
    ||||    
T  52390317 gatg 52390314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 10 - 301
Target Start/End: Original strand, 36128450 - 36128744
Alignment:
Q  10 ggacatcatcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttaga 108  Q
    |||| |||| ||| |||||||||||||||||||||||| |||||||||||  |||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36128450 ggacctcattgattcatctaagatgattggtggtaggcgtgcgatgactcggagccaccggagggagaggcagagcggccacatcccaaagaggggtaga 36128549  T
Q  109 ggtcggatggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agc-----caacag- 198  Q
    ||||||| ||  |||| ||||||||| |            ||||||||||||||||||| ||||| ||||| ||||| |||    |||      | |||     
T  36128550 ggtcggaggggagatggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttgacccgtcacagcttgttgaccagt 36128637  T
Q  199 -----gtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
         |||||||||||||||||||| ||||| ||||||||| |||| || || ||||| ||||||||||||||||||||| | ||||| |||||||||||    
T  36128638 ctggggtggagtacctgaattatcaggatcaagtacaccacaatgtgactga-ggtggatatgaccaggatcatataccacaacagcagcatgtaggaga 36128736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 48889740 - 48889824
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  48889740 aggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccagagcagca 48889824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 50963820 - 50963935
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  50963820 gatccatctaagatgattggtggtaggcgtgcgatgactcagagctaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 50963919  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  50963920 gagatggttcagggag 50963935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 198 - 299
Target Start/End: Original strand, 3976751 - 3976852
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||||| ||||||||||| |||    
T  3976751 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtggatatgaccaggatcatataccacaacagcagcatgtaggagacgat 3976850  T
Q  298 ga 299  Q
    ||    
T  3976851 ga 3976852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 3976569 - 3976665
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| || |||||||||||||| |||| |||||||||||    
T  3976569 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagtggccacatcccaaagaggggtagaggtcgga 3976665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 198 - 299
Target Start/End: Complemental strand, 4007378 - 4007276
Alignment:
Q  198 ggtggagtacctgaattatcaagatcagg-tacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatga 296  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| || |||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||    
T  4007378 ggtggagtacctgaattatcaggatcaggatacaccacgatgtgactgatggtggatatgaccaggatcatataccacagcagcagcatgtaggagacga 4007279  T
Q  297 tga 299  Q
    |||    
T  4007278 tga 4007276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 293
Target Start/End: Complemental strand, 2274130 - 2273857
Alignment:
Q  24 catctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtgga 122  Q
    |||||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||  ||    
T  2274130 catctaagatgattgggggtaggcgtgcgataactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggggaga 2274031  T
Q  123 tgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agc-----caacag------gtggagtac 207  Q
    || ||||||||| |            ||||||||||||||||||| ||||| ||||| ||||| |||    |||      | |||      |||||||||    
T  2274030 tggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttgacccgtcacagcttgttgaccagtctggggtggagtac 2273943  T
Q  208 ctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
    ||||| ||||| ||||||||||| || ||||| || |||||||| ||||| ||||| ||||||||| || ||||||||||||||||    
T  2273942 ctgaactatcaggatcaggtacaacatgatgtgactgatggtggatatgaacaggaacatataccacagaagcaacatgtaggaga 2273857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 30255032 - 30254948
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| || ||||||||||||||||||||    
T  30255032 aggtggagtacctgaattatcaggatcaggtacaccacgatgtgaccgatggtgggtatgatcatgatcatataccagagcagca 30254948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 42166026 - 42166122
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| | |||||||||| ||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||    
T  42166026 gatccatctaagatgattggtggtaggcgtacgatgactcagagccaccagagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 42166122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 52390599 - 52390503
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||| ||| ||||||||||||||||| |||| |||||||||||    
T  52390599 gatccatctaagatgattggtggtaggtgtgcgatgactcagagccaccggagggagaagcagagcggccacatcccaaagaggggtagaggtcgga 52390503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 50997045 - 50997144
Alignment:
Q  202 gagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||| |||||| |||||||||||||| ||||| | ||||||||||| |||||||    
T  50997045 gagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtggatatgacaaggatcatataccacagcagtagcatgtaggagacgatgatg 50997144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 50216147 - 50216029
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||||||||| || |||||||| ||||| ||||||||||||||||| |||| ||||||||||| ||    
T  50216147 gatccatctaaaatgattggtggtaggcgtgcgatgactcaaagtcatcggagggacaggcagagcggccacatcccaaagaggggtagaggtcggaggg 50216048  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||| ||||||    
T  50216047 gagatggttcagagagttc 50216029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 29009921 - 29010004
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  29009921 ggtggagtacctgaactatcaagatcaggtacaacatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 29010004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 47073417 - 47073302
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||| |||||  |||||||||||| || ||||||||||||||||| ||| ||||||||||||| |||| ||||||||||| ||    
T  47073417 gatccatctaagatgattggtagtaggtgtgcgatgactcagagtcaccggagggagaggcagagcagccacatcccaaagaggggtagaggtcggaggg 47073318  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  47073317 gagatggttcagggag 47073302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 50215963 - 50215864
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatga 299  Q
    ||||||||||||||||||| |  |||||||||||| |||| || |||||||||||||||||||||||||||||| | || || |||||||||||||||||    
T  50215963 tggagtacctgaattatcagg--caggtacaccacaatgtgactgatggtgggtatgaccaggatcatataccacaacaacagcatgtaggagatgatga 50215866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 29009739 - 29009835
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||| ||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || ||||||||||||||||| |||| |||||||||||    
T  29009739 gatcaatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagcggccacatcccaaagaggggtagaggtcgga 29009835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 273
Target Start/End: Original strand, 46390014 - 46390087
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||| ||||| ||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||    
T  46390014 tggagtacctgaactatcaggatcaggtacatcacgatgtgacggacggtggatatgaccaggatcatatacca 46390087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 30255213 - 30255134
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||  ||| |||||||||||| || |||||||||||    
T  30255213 gatccatctaagatgattggtggtaggtgtgcgatgacccaaagccattggaaggagaggcaaagtgggcacatcccaaa 30255134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 34046437 - 34046512
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  34046437 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 34046512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 42903201 - 42903126
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  42903201 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 42903126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 49143474 - 49143399
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  49143474 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 49143399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 50479818 - 50479743
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  50479818 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 50479743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 54387185 - 54387260
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  54387185 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 54387260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 4007533 - 4007472
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggca 81  Q
    |||||||||||||||||||||||||||| | |||||||||| |||||||||| |||||||||    
T  4007533 gatccatctaagatgattggtggtaggcgtacgatgactcagagccaccggatggagaggca 4007472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 42903383 - 42903287
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  42903383 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 42903287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 49143656 - 49143560
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  49143656 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 49143560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 50480000 - 50479904
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  50480000 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 50479904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 8731858 - 8731753
Alignment:
Q  149 ctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatgg 248  Q
    ||||||||||||| |||||| | |||||||||||||||| || |||   ||| ||||||||||||||||| |||||| ||||||||||||  || |||||    
T  8731858 ctcaggctacaca-cctgaacaatcgcaggtggttgatctgaccca---ggtcgagtacctgaattatcaggatcagatacaccacgatgccactgatgg 8731763  T
Q  249 tgggtatgac 258  Q
    ||| ||||||    
T  8731762 tggttatgac 8731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 149 - 258
Target Start/End: Complemental strand, 9083745 - 9083640
Alignment:
Q  149 ctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatgg 248  Q
    ||||||||||||| |||||| | |||||||||||||||| || |||   ||| ||||||||||||||||| |||||| ||||||||||||  || |||||    
T  9083745 ctcaggctacaca-cctgaacaatcgcaggtggttgatctgaccca---ggtcgagtacctgaattatcaggatcagatacaccacgatgccactgatgg 9083650  T
Q  249 tgggtatgac 258  Q
    ||| ||||||    
T  9083649 tggttatgac 9083640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 34046256 - 34046351
Alignment:
Q  21 atccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    ||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  34046256 atccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 34046351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 46389830 - 46389926
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | |||||||||||| |||| |||||||||||    
T  46389830 gatccatcgaggatgattggtggtaggcatgccatgactcagagccaccgcagggagagacagattgcccacatcccaaagaggggtagaggtcgga 46389926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 46701219 - 46701123
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | |||||||||||| |||| |||||||||||    
T  46701219 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagattgcccacatcccaaagaggggtagaggtcgga 46701123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 54387003 - 54387099
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| ||||||||  ||||||| || || | |||||||||||| |||| |||||||||||    
T  54387003 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcggggagagacagagtgcccacatcccaaagaggggtagaggtcgga 54387099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 46701037 - 46700962
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||| ||||| || ||||| || ||  |||| |||||||||||||||||||||    
T  46701037 ggtggagtacctgaactatcaggatcatgtacatcatgatgtgacagacagtggatatgaccaggatcatatacca 46700962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 63
Target Start/End: Original strand, 48889596 - 48889639
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaag 63  Q
    |||||||||||||||||||||||||||| ||||||||| |||||    
T  48889596 gatccatctaagatgattggtggtaggcgtgcgatgacccaaag 48889639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 301
Target Start/End: Original strand, 19798131 - 19798417
Alignment:
Q  16 catcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgg 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||    
T  19798131 catcgatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcggccacatcccaaagaggggaagaggtcgg 19798230  T
Q  115 atggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaatt 214  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||    
T  19798231 atggtggatggttcagggagttcgaaggaggcttctcaggctacacagcctgaagagtcgcaggtggttgatccgagccagcaggtgcagtacctggatt 19798330  T
Q  215 atcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  19798331 atcaggatcaagtacaccacgatgttacggatgatgggtatgaccaggatcatatactagagcagcaacatgtaggagatgaagatg 19798417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 47777113 - 47777395
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||||||||||||||||||| || | ||||||||||| ||    
T  47777113 gatccatctaagatgattggtggtaggcatgcaatgactcaaagctaccggagcgagaggcaaagcggccacatcccaaagagaggtagaggtcggaggg 47777212  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  47777213 tggatggttcagggagttcgcaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgacccgagccagcaggtggagtacctgaattatca 47777312  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | ||| ||| |||||||||||    
T  47777313 ggatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatgccacagcagtagcatatagcagatgatgatg 47777395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 24 - 301
Target Start/End: Original strand, 16677895 - 16678172
Alignment:
Q  24 catctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtgga 122  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||    
T  16677895 catctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcggccacatcccaaagaggggaagaggtcggagggtgga 16677994  T
Q  123 tgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagat 222  Q
    || ||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  16677995 tggttcagggagttcgcaggaggcttctcaggctacacaac-tgaagagtcgcaggtggttgatccgagccagcaggtggagtacctgaattatcaggat 16678093  T
Q  223 caggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  16678094 caggtacaccacaatgttacagatggtgggtatgaccaggatcatataccagaggagcaacatatagcagatgatgatg 16678172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 24 - 301
Target Start/End: Original strand, 17652131 - 17652408
Alignment:
Q  24 catctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtgga 122  Q
    |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||||||    
T  17652131 catctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcggccacatcccaaagaggggaagaggtcggagggtgga 17652230  T
Q  123 tgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagat 222  Q
    || ||||||||||||| |||||||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  17652231 tggttcagggagttcgcaggaggcttctcaggctacacaac-tgaagagtcgcaggtggttgatccgagccagcaggtggagtacctgaattatcaggat 17652329  T
Q  223 caggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  17652330 caggtacaccacaatgttacagatggtgggtatgaccaggatcatataccagaggagcaacatatagcagatgatgatg 17652408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 285
Target Start/End: Complemental strand, 27452829 - 27452563
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaaa-gggttagaggtcggatgg 118  Q
    |||||||||||||||||||||| ||||| ||  |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||||| ||||| ||    
T  27452829 gatccatctaagatgattggtgttaggcgtgtaatgactcagagccaccagagggagaggcaaagcggccacatcccaaaaaggggtagagatcggaggg 27452730  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||| | |||||| ||||||||| |||||||||||||    
T  27452729 tggatggttcagggagttcgcaggaggcttctcaggctacacagcctgaagagtcgcacgtggttgacctgagccagcaggtggagcacctgaattatca 27452630  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacat 285  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27452629 ggatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccacagcagcaacat 27452563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 37341167 - 37341449
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||  |||||||| | ||    
T  37341167 gatccatctaagatgattggtggtaagcgtgcgatgactcaaagccaccggaagcagaggcaaagcgggcacatcccaaagaggggaagaggtcgaaggg 37341266  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  37341267 gggatggttcagggacttcgcaggaggcttctcaggctacacagcctaaagagtcgcaggtggttgatccgagccaggaggtggagtacctgaattatca 37341366  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || ||||||||||||||||||||||||||||||||| |||| ||| ||| | |||||||||    
T  37341367 ggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccagagtagcagcatatagcatatgatgatg 37341449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 39461320 - 39461603
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaaa-gggttagaggtcggatgg 118  Q
    ||||||||||||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||  | |||||||| ||    
T  39461320 gatccatctaagatgattgctggtaggcgagcgatgactcagagccaccggagggagaggcaaagcgggcacatcccaaaaaggggaaaaggtcggaggg 39461419  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||  ||||||||||||| | |||||||||||||||||| ||||||||||| | ||||||||||||| |||||| |||||||||||||||||||||||    
T  39461420 tggattgttcagggagttcgcatgaggctgctcaggctacatagcctgaagagccccaggtggttgatctgagccagcaggtggagtacctgaattatca 39461519  T
Q  219 agatcaggtacaccacgatgttacggatggt-gggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||| || |||||| ||| |||||||||||    
T  39461520 ggatcaagtacaccacgatgttacgaatggtggggtatgaccaggatcatataccagatcaacaacatatagcagatgatgatg 39461603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 284
Target Start/End: Complemental strand, 5540785 - 5540529
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| |||||||||||||| |||| ||||||||||| ||    
T  5540785 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggaaaagtggccacatcccaaagaggggtagaggtcggaggg 5540686  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||  |||||||||||         |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  5540685 tggatggttcagggagttcacaggaggctgct---------cagcctgaagagtcacaggtggttgatccgagccaataggtggagtacctgaattatca 5540595  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaaca 284  Q
     ||||| |||||||||||||||||||| ||||||||||||||| || |||||||| | ||||||||    
T  5540594 ggatcaagtacaccacgatgttacggagggtgggtatgaccagaatgatataccacaacagcaaca 5540529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 34739226 - 34739511
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||| |||||||||||| ||||||||||| ||||| |||| ||||||||||| ||    
T  34739226 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccagagggagaggcagagcggccacattccaaagaggggtagaggtcggaggg 34739325  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaac---------------aggtgga 203  Q
      |||| |||||||||||            ||||||||||||||||||||||||| ||||| ||||| |||   || |               || ||||    
T  34739326 gagatggttcagggagtt------------ctcaggctacacagcctgaagagtcacaggttgttgacccgtcacagctttttgaccagtctgagttgga 34739413  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||| || ||||| |||||||||||||||||||| || ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||||    
T  34739414 gtacctaaaatatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcacataccacaacagcagcatgtaggagatgatgatg 34739511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 181 - 297
Target Start/End: Original strand, 11635784 - 11635900
Alignment:
Q  181 gttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagc 280  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||| |||    
T  11635784 gttgatccgagccagcaggtggagtacctgaattatcaggatcaggtacaccacgatgttacggatggtggatatgaccagcatcatatactagagtagc 11635883  T
Q  281 aacatgtaggagatgat 297  Q
    ||||| ||| |||||||    
T  11635884 aacatatagcagatgat 11635900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 178 - 299
Target Start/End: Complemental strand, 11635704 - 11635583
Alignment:
Q  178 gtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagc 277  Q
    |||||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||||||     
T  11635704 gtggttgatctgagtcagcaggtggagtacctgaattatcaggatcaggtacaccacgatgtaaccgatggtgggtatgaccaagatcatataccagagt 11635605  T
Q  278 agcaacatgtaggagatgatga 299  Q
    |||||||| ||| |||||||||    
T  11635604 agcaacatatagcagatgatga 11635583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 46739542 - 46739439
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| |||||| |||| |||    
T  46739542 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaagagacgat 46739443  T
Q  298 gatg 301  Q
    ||||    
T  46739442 gatg 46739439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 200 - 301
Target Start/End: Original strand, 17836123 - 17836224
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatga 299  Q
    |||||||| |||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||||||||||||||||| |||||    
T  17836123 tggagtacatgaattatcaggatcaggtacaccacgatgtgactgatggtggatatgaccaggatcatataccacaacagcaacatgtaggagacgatga 17836222  T
Q  300 tg 301  Q
    ||    
T  17836223 tg 17836224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 9494015 - 9493936
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  9494015 gatccatctaagatgattggtggtaggcgtgcgatgacccaaagccaccggaaggagaggcaaagcgggcacatcccaaa 9493936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 10517757 - 10517872
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||| | |||||||  ||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  10517757 gatccatctaagatgattggtggtaggcgtgcgatgactgagagccaccatagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 10517856  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  10517857 gagatggttcagggag 10517872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 46739723 - 46739608
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||| || |||||||||||||||||  ||| ||||||||||| ||    
T  46739723 gatccatctaagatgattggtggtaggcgtgcgatgaatcagagccaccggagggagagacagagcggccacatcccaaagcggggtagaggtcggaggg 46739624  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  46739623 gagatggttcagggag 46739608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 15073478 - 15073382
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  15073478 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 15073382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 17835939 - 17836035
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||| ||||||| |||| ||||||| |||| |||| |||||||||||    
T  17835939 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggaggaagaggcagagcgaccacatcgcaaagaggggtagaggtcgga 17836035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 197 - 281
Target Start/End: Complemental strand, 47672151 - 47672067
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||| ||||||||| |||||||||||||||||||| || |||||||||||||||||| ||||||||||| |||||||    
T  47672151 aggtggagtaccagaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccagaatcatataccaaagcagca 47672067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 197 - 279
Target Start/End: Complemental strand, 9493834 - 9493752
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcag 279  Q
    |||||||||||||||||||||| ||||||||||| ||| |||| || |||||||| |||||||||||||||||||||||||||    
T  9493834 aggtggagtacctgaattatcaggatcaggtacagcacaatgtgactgatggtggatatgaccaggatcatataccagagcag 9493752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 15073296 - 15073213
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  15073296 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 15073213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 42507105 - 42507022
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  42507105 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 42507022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 42507287 - 42507194
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtc 112  Q
    |||||||| |||||||||||||||||||  || |||||||| |||||||| ||||||||||| ||||||||||||||||| |||| ||||||||    
T  42507287 gatccatcgaagatgattggtggtaggcgcgccatgactcagagccaccgcagggagaggcagagcggccacatcccaaagaggggtagaggtc 42507194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 197 - 281
Target Start/End: Original strand, 36978622 - 36978706
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||||||||||||| ||| |||||||||||||||| |  ||||||||||||||||| ||||||||| ||||| ||||    
T  36978622 aggtggagtacctgaattatcaggattaggtacaccacgatgtgattgatggtgggtatgaccaagatcatatatcagagaagca 36978706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 17462316 - 17462241
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  17462316 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatatacca 17462241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 17590898 - 17590973
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  17590898 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatatacca 17590973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 14689367 - 14689254
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaaagggttagaggtcggatggt 119  Q
    |||||||||||||||||||||||||||| || |||||| |||| ||||| || ||||||||||||||| ||||||| |||| ||  |||| ||||| ||     
T  14689367 gatccatctaagatgattggtggtaggcgtgtgatgacccaaaaccaccagaaggagaggcaaagcgggcacatccaaaaaagggaagagatcggagggg 14689268  T
Q  120 ggatgtttcaggga 133  Q
     |||| ||||||||    
T  14689267 agatggttcaggga 14689254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 17462498 - 17462402
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || || |||||||| ||||| |||| |||||||||||    
T  17462498 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtggccacattccaaagaggggtagaggtcgga 17462402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 17590716 - 17590812
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || || |||||||| ||||| |||| |||||||||||    
T  17590716 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtggccacattccaaagaggggtagaggtcgga 17590812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 9370401 - 9370326
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  9370401 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 9370326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 35609437 - 35609362
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  35609437 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 35609362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 41881552 - 41881627
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  41881552 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 41881627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 48404419 - 48404494
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  48404419 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 48404494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 9370583 - 9370487
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  9370583 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 9370487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 41881370 - 41881466
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  41881370 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 41881466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 48404237 - 48404333
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  48404237 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 48404333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 35609619 - 35609523
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | | |||||||||| |||| |||||||||||    
T  35609619 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagattgcctacatcccaaagaggggtagaggtcgga 35609523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 47672214 - 47672174
Alignment:
Q  149 ctcaggctacacagcctgaagagtcgcaggtggttgatccg 189  Q
    ||||||||||||||||||||||||| ||||| ||||| |||    
T  47672214 ctcaggctacacagcctgaagagtcacaggttgttgacccg 47672174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 20 - 300
Target Start/End: Complemental strand, 50343202 - 50342921
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||| |||| ||    
T  50343202 gatccatctaagatgattggtggtaggtctgcgatgactcagagccaccggagggagcggcaaagcggccacatcccaaagaggggtagaggccggaggg 50343103  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  50343102 tggatggttcagggagttcgcaggaggcttctcaggctacacagcctgaagagtcgcaggtggttgatccgagccagcagatggagtacctgaattatca 50343003  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgat 300  Q
     || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  50343002 ggaccaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcagcatgtaggagatgatgat 50342921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 273
Target Start/End: Original strand, 47503147 - 47503401
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||||| |||| |||| ||||||||||| ||    
T  47503147 gatcgatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagagacaaagcggccacatctcaaagaggggtagaggtcggaggg 47503246  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| ||||||||  ||||| ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  47503247 tggatggttcagggagttcgcaggaggcttctcaggctcaacagcatgaagagtcgcaggtggttgacccgagccagcaggtggagtacctgaattatca 47503346  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47503347 ggatcaggtacaccacgatgttacagatggtgggtatgaccaggatcatatacca 47503401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 52802996 - 52803277
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaaagggttagaggtcggatggt 119  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||||||||||||  || ||||||||||| ||     
T  52802996 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagagggtagaggtcggagggg 52803095  T
Q  120 ggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaa 219  Q
     |||| ||||||||||||| | |||||| |||| ||||||||||||||||||||||| |||||||| |||||||| |||| ||||||||||||||||||     
T  52803096 agatggttcagggagttcgcatgaggcttctcaagctacacagcctgaagagtcgcatgtggttgacccgagccagcaggaggagtacctgaattatcag 52803195  T
Q  220 gatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||||||||||||||||| || |||||||| ||||||||||||||||||||| ||||||| ||||| | |||||||||||    
T  52803196 gatcaggtacaccacgatgtgactgatggtggatatgaccaggatcatataccacagcagcagcatgtggtagatgatgatg 52803277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 38126715 - 38126434
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||  |||||||||| ||    
T  38126715 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagccaccggaaggagaggcaaagtgggcacatcccaaagaggggaagaggtcggaggg 38126616  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| ||||||||||| |  |||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |    
T  38126615 -ggatggttcagggacttcgtaggaggattttcatactacacagcctgaagagtcgcaggtggttgatccgagccaggaggtggagtacctgaattatta 38126517  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  38126516 ggatcaggtacacaacgatgtgactgatggtgggtatgaccaggatcatataccagagcagcaacatatagtagatgatgatg 38126434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 47656708 - 47656990
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| || ||||||||||| ||||  |||||||||| |     
T  47656708 gatccagctaagatgattggtggtaggcgtgcgatgactcaaagccaccggaaggagaggcaaagtgggcacatcccaaagaggggaagaggtcggaggt 47656807  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||    
T  47656808 gggatgattcagggacttcgcaggaggcttctcagactacacagcctgaagagtcgcaggtggttgatccgagccaagaggtggagtacttgaattatca 47656907  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||| ||| ||| |||||||    
T  47656908 ggatcaggtacaccacgatgtgactgatggtgggtatgaccatgatcatataccagagcaacaacatatagcagacgatgatg 47656990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 45825739 - 45826020
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||| |||||| ||||| || ||||||||||| ||||  |||||||||| |     
T  45825739 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggaaggagagacaaagtgggcacatcccaaagaggggaagaggtcggaggt 45825838  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| |||||| | ||||||||||||| ||| |||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  45825839 tggatggttcagggacttcgcaggaggtttctcaggctacacaaccttaagagtcgcatgtggttgatccgagccaggaggtggagtacctgaattatca 45825938  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||||||||| ||  |||||||||||    
T  45825939 ggatcaggtacaccacgatgttacggatggt-gatatgaccaggatcatataccaaagcagcaacatataatagatgatgatg 45826020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 49 - 301
Target Start/End: Original strand, 21141746 - 21142002
Alignment:
Q  49 tgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtggatgtttcagggagttcgtaggaggct 147  Q
    |||||||||| | ||||||||||||||||||||||| |||||||||||||| |||| |||||||| || |||||||| ||||||||||||  ||||||||    
T  21141746 tgcgatgacttagagccaccggagggagaggcaaagtggccacatcccaaagaggggtagaggtctgagggtggatggttcagggagttcacaggaggct 21141845  T
Q  148 gctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatg 247  Q
     |||| |||||||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||| ||||    
T  21141846 tctcatgctacacaacctgaagagtcgcaggtggttaatccgagccatcaggtggagtacctgaattatcaggatcgggtacaccacgatgttacagatg 21141945  T
Q  248 gtgggtatgaccaggatcatatacc---agagcagcaacatgtaggagatgatgatg 301  Q
    |||||||||||||||||||||||||   | |||||||| || ||| |||||||||||    
T  21141946 gtgggtatgaccaggatcatataccacaacagcagcaaaatatagcagatgatgatg 21142002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 23275333 - 23275072
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| || | ||||||||||||||| ||||||||||| ||||  |||||||||||||    
T  23275333 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagccatcgaaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcggatgg 23275234  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||                     |||||||||||||||||||    
T  23275233 tggatggttcagggagttcgcaggaggcttctcaggctacacagcctgaagagtcgcagg---------------------tggagtacctgaattatca 23275155  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||| ||| |||||||    
T  23275154 ggatcaggtacaccacgatgttacggatggtgggtatgatcaggatcatataccagagcagcagcatatagcagacgatgatg 23275072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 97132 - 96865
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  97132 gatccatctaagatgattggtggtaggtgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga-gg 97034  T
Q  119 tg-gatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatc 217  Q
    || |||| ||||||||| ||            |||||||||||||||||| ||||| ||||| ||||| | |        ||||||||||||||||||||    
T  97033 tgagatggttcagggagctc------------tcaggctacacagcctgaggagtcacaggttgttgacctgtctgg---ggtggagtacctgaattatc 96949  T
Q  218 aagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    | |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  96948 aggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagacgatgatg 96865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 281
Target Start/End: Original strand, 51321557 - 51321832
Alignment:
Q  10 ggacatcatcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttaga 108  Q
    |||| |||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||  |||    
T  51321557 ggacctcattgatccatctaagatgattggtggtaggcgtgcgatgacccaaagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaaga 51321656  T
Q  109 ggtcggatggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaac------------ 196  Q
    ||||||| ||  |||| |||||||| |||            |||||||||||||||||||||||| || || ||||| |||   || |                
T  51321657 ggtcggaggggagatggttcagggacttc------------tcaggctacacagcctgaagagtcacaagttgttgacccgtcacagcttgttgaccagt 51321744  T
Q  197 ---aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
       |||||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  51321745 ttgaggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccagagcagca 51321832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 21 - 293
Target Start/End: Original strand, 22525082 - 22525340
Alignment:
Q  21 atccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggt 119  Q
    |||||||||  ||||||||||||||||  ||||||||  | |||||||| ||||||||||| |||| |||||||||||| |||| ||||||||||| ||     
T  22525082 atccatctagaatgattggtggtaggcgagcgatgaccaagagccaccgaagggagaggcagagcgtccacatcccaaagaggggtagaggtcggaaggg 22525181  T
Q  120 ggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaa 219  Q
     |||| ||||||||||||            |||||||||||||||||| |||||  |||| || || |||        ||||||||||||||| |||||     
T  22525182 agatggttcagggagttc------------tcaggctacacagcctgaggagtcataggttgtggacccgtctgg---ggtggagtacctgaactatcag 22525266  T
Q  220 gatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
    |||||||||||||||||||  || |||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  22525267 gatcaggtacaccacgatgggactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggaga 22525340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 118
Target Start/End: Original strand, 19156879 - 19156978
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  19156879 gatccatcaaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcggatgg 19156978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 31782937 - 31782822
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  31782937 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccagagggagaggcagagcggccacatcccaaagaggggtagaggtcggaagg 31782838  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  31782837 gagatggttcagggag 31782822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 19525251 - 19525133
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| | || ||||||||||| ||    
T  19525251 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccggagagagaggcagagcggccacatcccaaagaagggtagaggtcggaggg 19525152  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  19525151 gagatggttcagggagttc 19525133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 19525912 - 19525794
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| | || ||||||||||| ||    
T  19525912 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccggagagagaggcagagcggccacatcccaaagaagggtagaggtcggaggg 19525813  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  19525812 gagatggttcagggagttc 19525794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 19526386 - 19526268
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| | || ||||||||||| ||    
T  19526386 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccggagagagaggcagagcggccacatcccaaagaagggtagaggtcggaggg 19526287  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  19526286 gagatggttcagggagttc 19526268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 301
Target Start/End: Complemental strand, 19524219 - 19524118
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatga 299  Q
    |||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||||| |  |||| |||||||||||||||||    
T  19524219 tggagtacctaaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaagatcatataccacaatagcagcatgtaggagatgatga 19524120  T
Q  300 tg 301  Q
    ||    
T  19524119 tg 19524118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 19524403 - 19524285
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| |||||||||||||| |||||||| ||||||||||||||||| | ||  |||||||||| ||    
T  19524403 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccggagagagaggcagagcggccacatcccaaagaaggggagaggtcggaggg 19524304  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  19524303 gagatggttcagggagttc 19524285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 35258100 - 35258021
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  35258100 gatccatctaagatgattggtggtaggtgtgcgatgacccaaagccaccggaaggagaggcaaagcgggcacatcccaaa 35258021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 20 - 137
Target Start/End: Complemental strand, 2424419 - 2424301
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| ||||||||||||||||  |||||||| || |||||||||||||||||| | |||| |||||||||||| |||| ||||||||||| ||    
T  2424419 gatccatctaaaatgattggtggtaggcgagcgatgacccagagccaccggagggagaggtagagcgcccacatcccaaagaggggtagaggtcggaggg 2424320  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  2424319 gagatgattcagggagttc 2424301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 281
Target Start/End: Original strand, 2366158 - 2366238
Alignment:
Q  201 ggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||| ||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  2366158 ggagtacctgaactatcaagatcaggtacaacatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 2366238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 197 - 284
Target Start/End: Complemental strand, 49856998 - 49856911
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaaca 284  Q
    |||||||||||| ||||||||| ||||| |||||||||||||| || | |||| |||||||||| |||||||||||||||||||||||    
T  49856998 aggtggagtaccagaattatcaggatcaagtacaccacgatgtgactggtggtaggtatgaccaagatcatataccagagcagcaaca 49856911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 30890877 - 30890973
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| | |||||| || ||||||||||||||||| |||| |||||||||||    
T  30890877 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcaaggagagacagagcggccacatcccaaagaggggtagaggtcgga 30890973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 13639032 - 13638949
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||| ||| ||||||||||||||||||||| |||||||    
T  13639032 ggtggagtacctgaactatcaggatcaggtacaacatgatgtgacggatgatggatatgaccaggatcatataccacagcagca 13638949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 19157061 - 19157144
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| || |||||||| ||||||||||||||||||||| |||||||    
T  19157061 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgactgatggtggatatgaccaggatcatataccacagcagca 19157144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 26876704 - 26876779
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  26876704 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatatacca 26876779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 271
Target Start/End: Complemental strand, 35257919 - 35257845
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatac 271  Q
    |||||||||||||||||||||| | |||||||||||||||||| || ||||||| |||||||| |||||||||||    
T  35257919 aggtggagtacctgaattatcaggctcaggtacaccacgatgtgactgatggtgagtatgaccgggatcatatac 35257845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 13639215 - 13639118
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccgga-gggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| | ||||||| || ||||||||||||||||| |||| |||||||||||    
T  13639215 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcaggggagagacagagcggccacatcccaaagaggggtagaggtcgga 13639118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 197 - 273
Target Start/End: Complemental strand, 3731393 - 3731317
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    |||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  3731393 aggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 3731317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 198 - 293
Target Start/End: Complemental strand, 31782755 - 31782666
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
    ||||||||||||||||||||| |||||||||||||      | || |||||||| ||||||||||||||||||||| ||||||| |||||||||||    
T  31782755 ggtggagtacctgaattatcaggatcaggtacacc------tgactgatggtggatatgaccaggatcatataccacagcagcagcatgtaggaga 31782666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 30891026 - 30891101
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||    
T  30891026 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccatgatcatatacca 30891101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 87
Target Start/End: Original strand, 2366092 - 2366159
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcgg 87  Q
    ||||||||| |||||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||    
T  2366092 gatccatctcagatgattggtggtaggcgtgccatgactcatagccaccgtagggagaggcagagcgg 2366159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 115
Target Start/End: Original strand, 26876523 - 26876618
Alignment:
Q  21 atccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||| || |||||||| || || | |||||||||||| |||| |||||||||||    
T  26876523 atccatcgaagatgattggtggtaggcgtgccatgactcagagccaacgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 26876618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 3731574 - 3731478
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | |||||||||||| |||| |||||||||||    
T  3731574 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagattgcccacatcccaaagaggggtagaggtcgga 3731478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 49857177 - 49857065
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||| ||||| || |||||| |||||||| |||| |  |||||||||||| ||||||| ||| ||||  |||||||||| ||    
T  49857177 gatccatctaagatgattggtgataggcgtgtgatgacccaaagccatcggaag--gaggcaaagcgggcacatcctaaagaggggaagaggtcggaggg 49857080  T
Q  119 tggatgtttcaggga 133  Q
      |||| ||||||||    
T  49857079 gagatggttcaggga 49857065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 198 - 237
Target Start/End: Complemental strand, 2424255 - 2424216
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgat 237  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  2424255 ggtggagtacctgaactatcaggatcaggtacaccacgat 2424216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 211; Significance: 1e-115; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 5197802 - 5198084
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||||||| ||    
T  5197802 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccatcggagggagaggcaaagcggccacatcccaaataggggtagaggtcggaggg 5197901  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||  |||||||| ||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||    
T  5197902 tggatggttcagggagttcacaggaggcttctcaggctacacagcctgaagagtcacatgtggttgatccgagccagcaggtggagtacctgaattatca 5198001  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||    
T  5198002 ggatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatttactagagcagcaacatgtaggagataatgatg 5198084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 42538011 - 42538208
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||||| ||||  |||||||||| ||    
T  42538011 gatccatctaagatgattggtggtaggcatgcgatgactcaaagccaccggaaggagagacaaagcgggcacatcccaaagaggggaagaggtcggaggg 42538110  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattat 216  Q
    |||||| ||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||||| || |||||||| |||||||||    
T  42538111 tggatggttcagggagttcgcaggaggctgctcaggccacacaacctgaagagtcgcaggtggttgatccgagccagcatgtggagtatctgaattat 42538208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 40624137 - 40623849
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||| |||||||||||||||||||| |||||||||| | ||||| || | |||||||||||| || ||||||||||| |||| ||||||||||| ||    
T  40624137 gatccatttaagatgattggtggtaggcgtgcgatgacttagagccatcgaaaggagaggcaaagggggcacatcccaaagaggggtagaggtcggaggg 40624038  T
Q  119 tggatgtttcagggagttcgtagg------aggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaa 212  Q
     ||||| |||||||| |||  |||      ||||| | |||||||||||| |||||||||||||||||||||  |||| | |  ||||||||||||||||    
T  40624037 gggatggttcagggacttctcaggcttctaaggcttcgcaggctacacagtctgaagagtcgcaggtggttggcccgacctaggaggtggagtacctgaa 40623938  T
Q  213 ttatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||| |||||||||||||||||||  || ||||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||    
T  40623937 ttatcaggatcaggtacaccacgatgcgactgatggtgggtatgaccaggatcatataccagagcaacaacatataccagatgatgatg 40623849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 286
Target Start/End: Complemental strand, 8701434 - 8701176
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||| ||||||||||||||||||||||| |||||||||  |||||||||||| ||||||||||||||| ||||||| ||| ||||  |||||||||| ||    
T  8701434 gatcaatctaagatgattggtggtaggcgtgcgatgacctaaagccaccggaaggagaggcaaagcgggcacatccaaaagaggggaagaggtcggaggg 8701335  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
       ||| |||||||| |||  |||      ||   | |||||||||||||||||| ||||| | ||| | || |||  ||||| ||||||||||||||||    
T  8701334 gatatggttcagggacttctcagg------ct---gttacacagcctgaagagtcacaggttgctgaccagacccaggaggtgaagtacctgaattatca 8701244  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatg 286  Q
     |||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||||||||    
T  8701243 ggatcaggtacaccacgatgtgactgatggtgggtatgatcaggatcatataccagagcagcaacatg 8701176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 14007 - 13740
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||| |  | ||||||||||| ||    
T  14007 gatccatctaagatgattggtggtaggcgtgcgatgacacagagccaccggagggagaggcagagcggccacatcccaaagaatggtagaggtcggaggg 13908  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||| |            ||||||||||||||||||| ||||| ||||| |||||  | || |    ||||||||||||||| |||||    
T  13907 gagatggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttga--ccagtc-tggggtggagtacctgaactatca 13823  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||| | || ||||| || |||||||| ||||||||||||||||||||| |||||||  |||||||||| |||||||    
T  13822 ggatcaggtataacatgatgtgactgatggtggatatgaccaggatcatataccacagcagcaggatgtaggagacgatgatg 13740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 197 - 301
Target Start/End: Complemental strand, 42941516 - 42941412
Alignment:
Q  197 aggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatga 296  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  42941516 aggtggagtacctggattatcaggatcaggtacaccacgatgttacagatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagatga 42941417  T
Q  297 tgatg 301  Q
    |||||    
T  42941416 tgatg 42941412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 7758350 - 7758453
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    |||||| |||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||    
T  7758350 ggtggaatacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagacgat 7758449  T
Q  298 gatg 301  Q
    ||||    
T  7758450 gatg 7758453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 27672862 - 27672766
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  27672862 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 27672766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 286
Target Start/End: Original strand, 38968961 - 38969213
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||| |||||||||||||||||||| ||||| ||| |||||||||| ||  ||||||| ||| || ||||||||||| ||||  |||||||||| ||    
T  38968961 gatccatttaagatgattggtggtaggcgtgcgaagacccaaagccaccagaaagagaggctaagtgggcacatcccaaagaggggaagaggtcggaggg 38969060  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| |||||||| ||| ||||            ||||||||||||||||||| ||||| ||||| |||    |   || |||||||||| |||||||    
T  38969061 gagatggttcagggacttcttagg------------ctacacagcctgaagagtcacaggttgttgacccgtctga---ggcggagtacctgcattatca 38969145  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatg 286  Q
     |||||||||||||||||||| ||  ||||||||||||||| ||||||||||||||||||||| ||||    
T  38969146 ggatcaggtacaccacgatgtgactaatggtgggtatgaccgggatcatataccagagcagcagcatg 38969213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 7758168 - 7758283
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||| |||| ||||||||||| ||    
T  7758168 gatcgatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggcgacatcccaaagaggggtagaggtcggaggg 7758267  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  7758268 gagatggttcagggag 7758283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 32 - 278
Target Start/End: Complemental strand, 19228145 - 19227895
Alignment:
Q  32 atgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtggatgtttcag 130  Q
    |||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||  |||||||||| ||  |||| |||||    
T  19228145 atgattggtggtaggcgtgcgatgacccaaagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcggaggggagatggttcag 19228046  T
Q  131 ggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatcc-------------gagccaac--aggtggagtacctgaatta 215  Q
    |||            ||||||||||| |||||||||||||||| ||||| ||||||||             || |   |  ||||||||||| |||||||    
T  19228045 gga------------ctgctcaggcttcacagcctgaagagtcacaggttgttgatccttcatagcttgttgaccagtctgaggtggagtacttgaatta 19227958  T
Q  216 tcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagca 278  Q
    ||| || ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||    
T  19227957 tcaggaccaggtacaccacgatgtgactgatggtgggtatgaccatgatcatataccagagca 19227895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 8579716 - 8579620
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatccca-aaagggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||| ||||||||||||||| | |||| |||||||||||    
T  8579716 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccgaagggagaggcagagcggccacatcccagagaggggtagaggtcgga 8579620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 42941697 - 42941618
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  42941697 gatccatctaagatgattggtggtaggcgtgtgatgacccaaagccaccggaaggagaggcaaagcgggcacatcccaaa 42941618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 28877505 - 28877610
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatccc-aaaagggttagaggtcggatgg 118  Q
    |||||||| ||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||| || ||||||||||| ||||||| ||||||||||| ||    
T  28877505 gatccatcgaagatgattggtggtaggcgtgccatgattcagagccaccgcagggagaggcagagtggccacatcccaaaaaggggtagaggtcggaggg 28877604  T
Q  119 tggatg 124  Q
    ||||||    
T  28877605 tggatg 28877610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 8579534 - 8579451
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||||||||||||||| || ||||| || |||||||| ||||||||||||||||||||| |||||||    
T  8579534 ggtggagtacctgaactatcaagatcaggtacaacatgatgtgactgatggtggatatgaccaggatcatataccacagcagca 8579451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 19040128 - 19040045
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  19040128 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 19040045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 30706147 - 30706230
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  30706147 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 30706230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 19040310 - 19040216
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcg 113  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||  |||||||||||||||| |||| |||||||||    
T  19040310 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagaggcagggcggccacatcccaaagaggggtagaggtcg 19040216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 28241033 - 28240937
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || || |||||||||||||| |||| |||||||||||    
T  28241033 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtggccacatcccaaagaggggtagaggtcgga 28240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 30705965 - 30706061
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| |||||||||||| |||||||| ||| ||||||| ||| ||||| ||||||| |||| |||||||||||    
T  30705965 gatccatcgaagatgattggtggtaggcgtgcgatgactcagagccaccgcaggaagaggcagagcagccacttcccaaagaggggtagaggtcgga 30706061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 17659188 - 17659263
Alignment:
Q  24 catctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||||||||||||||||||| || |||||| ||||||||||||| |||||||||||||||  ||||||||||    
T  17659188 catctaagatgattggtggtaggcgtgggatgacacaaagccaccggaaggagaggcaaagcgggtacatcccaaa 17659263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 28240851 - 28240776
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  28240851 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatatacca 28240776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 27672680 - 27672597
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| || |||||||| ||||||||||||| ||||||| |||||||    
T  27672680 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgactgatggtggatatgaccaggatcgtataccacagcagca 27672597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 28877685 - 28877768
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||| ||||| ||||| ||||||||||| || ||||| ||||| ||||| ||||||||||||||||||||| |||||||    
T  28877685 ggtggagtatctgaactatcaggatcaggtacagcatgatgtgacggacggtggatatgaccaggatcatataccacagcagca 28877768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 227 - 281
Target Start/End: Original strand, 27972263 - 27972317
Alignment:
Q  227 tacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||| || |||||||||||||||||  | |||||||||||| ||||    
T  27972263 tacaccacgatgtcactgatggtgggtatgaccaacaacatataccagagtagca 27972317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 211; Significance: 1e-115; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 50194318 - 50194600
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||||||||||||||| ||||  |||||||||| ||    
T  50194318 gatccatctaagatgattggtggtaggtgtacgatgactcagagccaccggagggagaggcaaagcggccacatcccaaagaggggaagaggtcggaggg 50194417  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  50194418 tggatggttcagggagttcgcaggaggcttctcaggctacacagcctgaagagtcgcaggtggttgatccgagccagcaggtggagtacctgaattatca 50194517  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||| |||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  50194518 ggatcaagtacactacgatgttacggatggtgggtatgactaagatcatataccagagcagcaacatgtaggagatgatgatg 50194600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 51684064 - 51684346
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||| |||| | |||||||||||| || | ||||||||| ||||  ||||||| || ||    
T  51684064 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagctaccgaaaggagaggcaaagtgggcgcatcccaaagaggggaagaggtcagaggg 51684163  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  51684164 tggatggttcagggagttcgtaggaggcttctcaggctacacagcctaaagagtcgcaggtggttgatccgagccagcaggtggagtacctaaattatca 51684263  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  51684264 ggatcaggtacaccacgatgttacggatggtgagtatgaccaggatcatataccagagcagcaacatataatagatgatgatg 51684346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 30704863 - 30705145
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||| ||||||||| |||||| | ||||||||||||||| ||||||||||| ||||  ||| || ||| ||    
T  30704863 gatccatctaagatgattggtggtaggcgtgcgttgactcaaaaccaccgaaaggagaggcaaagcgggcacatcccaaagaggggaagacgtgggaggg 30704962  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||| ||||||||  ||||||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||||| |    
T  30704963 gggatggttcagggacttcgcaggaggcttatcaggctacacagcctgaaaagtcgcaggtggttgatccgagccaggaggtggagtacctgaattatta 30705062  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||||||||| |||  || |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||    
T  30705063 ggatcaggtacaccacaatgggactgatggtgggtatgaccaggatcatataccagagcagcaacatatagcagatgatgatg 30705145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 106 - 301
Target Start/End: Complemental strand, 50022738 - 50022543
Alignment:
Q  106 agaggtcggatggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagt 205  Q
    |||||||||| |||||||| ||||||||||||| |||||||| |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  50022738 agaggtcggagggtggatggttcagggagttcgcaggaggcttctcaagctacacagcccgaagagtcgcaggtggttgatccgagccagcaggtggagt 50022639  T
Q  206 acctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  50022638 acctgaattatcaggatcaggtacaccacgatgttatggatggtgagtatgaccaggatcatataccagagcagcagcatatagcagatgatgatg 50022543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 50902330 - 50902600
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||||| |||||||||||||||| ||||||||||||| ||||  |||||||||| ||    
T  50902330 gatccatctaagatgattggtggtaagcgtgcgatgactcagagccaccagagggagaggcaaagcagccacatcccaaagaggggaagaggtcggaggg 50902429  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||            ||||| |||||||||||||||||| || || ||||| |||  |||  ||||||||||||||||||||||    
T  50902430 tggatggttcagggacttc------------tcaggatacacagcctgaagagtcacaagttgttgacccgtcccactaggtggagtacctgaattatca 50902517  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||||||||||||||||| |||||||||||||||||||||||||||||| | ||||| ||| |||||||||||||||    
T  50902518 ggatcaggtacaccacgatgttacagatggtgggtatgaccaggatcatataccacaacagcagcatataggagatgatgatg 50902600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 20 - 281
Target Start/End: Original strand, 46437061 - 46437313
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||| ||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||||| ||||||||||| |||| ||||||||||| ||    
T  46437061 gatctatctaagatgattggtggtaggcgtgcgatgactcagagctaccggaaggagaggcaaagcgggcacatcccaaagaggggtagaggtcggaggg 46437160  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgag--ccaacaggtggagtacctgaattat 216  Q
     ||||| |||||||| ||| ||||            ||||| |||||||||||||||| |||||| | |||||  |||  ||||||||||||||||||||    
T  46437161 gggatgattcagggacttcttagg------------ctacatagcctgaagagtcgcaagtggttaacccgagacccagaaggtggagtacctgaattat 46437248  T
Q  217 caagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    || ||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||    
T  46437249 caggatcaggtacaccacgaagtgactgatggtgggtatgaccaggatcatataccagagcagca 46437313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 37021288 - 37021004
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||| |||||||| || ||    
T  37021288 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccatcggagggagaggcagagcggccacatcccaaagaggggtagaggtcagaggg 37021189  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agc-----caaca------ggtgga 203  Q
      |||| ||||||||| |            ||||||||||||||||||| ||||| ||||| |||||||||    |||      | ||      ||||||    
T  37021188 gagatggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttgatccgtcacagcttgttgaccagtctggggtgga 37021101  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    |||||||||||||||||||||| |||||||||| || || |||| |||||||||||||||| |||||||| ||||||| ||||||||||| |||||||    
T  37021100 gtacctgaattatcaagatcagatacaccacga-gtgactgatgatgggtatgaccaggataatataccacagcagcagcatgtaggagacgatgatg 37021004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 41932866 - 41932652
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| |||||||||| |||| ||||||||||| ||||  |||||||||| ||    
T  41932866 gatccatctaagatgattggtggtaggcgtgcgatgacacaaagccaccggaaggagaggcaaggcgggcacatcccaaagaggggaagaggtcggaggg 41932767  T
Q  119 tggatgtttcagggagttcgtaggaggctgctca---------ggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacct 209  Q
     |||||||||||| | |||  |||||||| ||||         ||||||| ||| |||| | |||||||||||||| ||||||||  ||||||| |||||    
T  41932766 gggatgtttcaggtacttctcaggaggcttctcaagcttctccggctacatagcttgaataatcgcaggtggttgacccgagccaggaggtggactacct 41932667  T
Q  210 gaattatcaagatca 224  Q
    ||||||||| |||||    
T  41932666 gaattatcaggatca 41932652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 254
Target Start/End: Complemental strand, 11083222 - 11083002
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||  ||||||| || ||    
T  11083222 gatccatctaagatgattggtggtaggagtgcgatgacacaaagccaccggaaggagaggcaaagcgggcacatcccaaagaggggcagaggtcagaggg 11083123  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| ||||||||            || ||||||||||||| ||||| ||||| |||||| |||| |||| |   |||||| ||| ||||||||||||    
T  11083122 gggatggttcaggga------------cttctcaggctacacaacctgatgagtcacaggtgcttgacccgacc---caggtgtagtgcctgaattatca 11083038  T
Q  219 agatcaggtacaccacgatgttacggatggtgggta 254  Q
     |||||||||||||||||||| || |||||||||||    
T  11083037 ggatcaggtacaccacgatgtgactgatggtgggta 11083002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 175 - 301
Target Start/End: Complemental strand, 55406470 - 55406344
Alignment:
Q  175 caggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccag 274  Q
    |||||||||||| |||||||| |||| ||||||||||||||| | ||||||||||||||||||||||| || |||| ||||||||| |||||||||||||    
T  55406470 caggtggttgattcgagccaagaggtagagtacctgaattattaggatcaggtacaccacgatgttactgacggtgagtatgaccacgatcatataccag 55406371  T
Q  275 agcagcaacatgtaggagatgatgatg 301  Q
    ||||||| ||| ||| |||||||||||    
T  55406370 agcagcatcatatagcagatgatgatg 55406344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 55406998 - 55406837
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||| |||||||  |||||||||||| |||||||||| ||||||||||| ||| ||||||||||| | ||  |||||||||| ||    
T  55406998 gatccatctaagatgattgctggtaggtgtgcgatgactcagagccaccggaaggagaggcaaatcgggcacatcccaaagatgggaagaggtcggaggg 55406899  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtg 180  Q
    |||||| |||||||| |||| ||||||||  ||| |||||||| ||||||||||| ||||||    
T  55406898 tggatggttcagggacttcggaggaggcttatcatgctacacaacctgaagagtcacaggtg 55406837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 10752650 - 10752448
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||| | || ||||||||||||||| ||||||||||| ||||  ||| |||||| ||    
T  10752650 gatccatctaagatgatcggtggtaggtgtgcgatgacacaaagccatcagaaggagaggcaaagcgggcacatcccaaagaggggaagatgtcggaggg 10752551  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||| ||| |||  ||    || || ||||||||||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||||||    
T  10752550 gggatggttcaaggacttctcaga---cttcttaggctacacagcctgaacagtcacaggtggttgacccgagccagtaggtggagtacctgaattatca 10752454  T
Q  219 agatca 224  Q
     |||||    
T  10752453 ggatca 10752448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 20 - 224
Target Start/End: Complemental strand, 10966419 - 10966217
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||| |||||||||  ||||||||| |||||||| | || ||||||||||||||| ||||||||||| ||||  ||| |||||| ||    
T  10966419 gatccatctaagatgatcggtggtaggtgtgcgatgacacaaagccatcagaaggagaggcaaagcgggcacatcccaaagaggggaagatgtcggaggg 10966320  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||| ||| |||  ||    || || ||||||||||||||||| |||| ||||||||||| ||||||||  ||||||||||||||||||||||    
T  10966319 gggatggttcaaggacttctcaga---cttcttaggctacacagcctgaacagtcacaggtggttgacccgagccagtaggtggagtacctgaattatca 10966223  T
Q  219 agatca 224  Q
     |||||    
T  10966222 ggatca 10966217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 44679086 - 44678983
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| || |||| ||||||||||| |||    
T  44679086 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagtagcagcatgtaggagacgat 44678987  T
Q  298 gatg 301  Q
    ||||    
T  44678986 gatg 44678983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 21022099 - 21022003
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  21022099 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 21022003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 200 - 299
Target Start/End: Original strand, 50275762 - 50275861
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatga 299  Q
    |||||| |||||||||||| |||||||||||||||||||| || |||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  50275762 tggagtgcctgaattatcaggatcaggtacaccacgatgtgactgatggtaggtatgaccaggatcatataccacagcagcagcatgtaggagatgatga 50275861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 3184856 - 3184971
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||| || ||||||||||||||||| |||| |||||||| || ||    
T  3184856 gatccatctaagatgattggtggtatgcgtgcgatgactcagagccaccggagggagagacagagcggccacatcccaaagaggggtagaggtcagaggg 3184955  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  3184956 gagatggttcagggag 3184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 44679268 - 44679153
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||| || |||||||||||||| | || ||||||||||| ||    
T  44679268 gatccatctaagatgattggtagtaggcatgcgatgactcagagccaccggagggagaggcagagtggccacatcccaaagaagggtagaggtcggaggg 44679169  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  44679168 gagatggttcagggag 44679153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 137
Target Start/End: Original strand, 50275578 - 50275696
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||  ||||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  50275578 gatccatctaaaatgattggtggttggcgtgcgatgacccaaagccattggagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 50275677  T
Q  119 tggatgtttcagggagttc 137  Q
      |||| ||||||||||||    
T  50275678 gagatggttcagggagttc 50275696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 21021917 - 21021814
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| || |||||||| ||||||||||||||||||||| |||||||  |||||||||| |||    
T  21021917 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgactgatggtggatatgaccaggatcatataccacagcagcaggatgtaggagacgat 21021818  T
Q  298 gatg 301  Q
    ||||    
T  21021817 gatg 21021814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 1088934 - 1088838
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| ||||||||||| ||| ||||||||||||| |||| |||||||||||    
T  1088934 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagaggcagagcagccacatcccaaagaggggtagaggtcgga 1088838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 273
Target Start/End: Complemental strand, 1308364 - 1308107
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || ||||||||||||||||| |||| |||| |||||| ||    
T  1308364 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagcggccacatcccaaagaggggtagaagtcggaggg 1308265  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agc-----caaca------ggtgga 203  Q
      ||||  ||||| || |            ||||||||||||||||||||||||| ||||| ||||| |||    |||     || ||      ||||||    
T  1308264 gagatggctcaggaagct------------ctcaggctacacagcctgaagagtcacaggttgttgacccgtcacagcctgttcaccagactggggtgga 1308177  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  1308176 gtacctgaactatcaggatcaggtacaacatgatgtgacggatggtggatatgaccaggatcatatacca 1308107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 40357491 - 40357395
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| ||||||| ||||  ||||| | ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  40357491 gatccatctaagatgattggtggtaggcgtgcgatggctcagggccactgcagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 40357395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 30725820 - 30725737
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  30725820 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 30725737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 41798188 - 41798094
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcg 113  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||  |||||||||||||||| |||| |||||||||    
T  41798188 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagaggcagggcggccacatcccaaagaggggtagaggtcg 41798094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 30726002 - 30725906
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||| |||||||||||||  || |||||||| |||||||| ||||||||||| ||||||||||||||||| |||| |||||||||||    
T  30726002 gatccatcgaagataattggtggtaggcgcgccatgactcagagccaccgcagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 30725906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 9892471 - 9892392
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||||||| ||||||||||||||||||| ||  |||||||| |||||||| ||||||||||| |||||||||||||||||    
T  9892471 gatccatcgaagatgattggtggtaggcgtgtcatgactcagagccaccgcagggagaggcagagcggccacatcccaaa 9892392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 41798006 - 41797923
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| |||||||||||  | ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  41798006 ggtggagtacctgaactatcaggatcaggtacattatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 41797923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 6180801 - 6180726
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  6180801 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 6180726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 31422750 - 31422825
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  31422750 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 31422825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 49091482 - 49091557
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  49091482 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 49091557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 49166077 - 49166152
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||    
T  49166077 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccatgatcatatacca 49166152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 6180983 - 6180887
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  6180983 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 6180887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 21537562 - 21537463
Alignment:
Q  149 ctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatgg 248  Q
    ||||||||||||| ||||||||||| || |||||||| |||| | |   | |||||||||| |||||||| |||||||||||||||||||| || |||||    
T  21537562 ctcaggctacacaacctgaagagtcacacgtggttgacccgaccta---gttggagtacctaaattatcaggatcaggtacaccacgatgtcactgatgg 21537466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 31422568 - 31422664
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| || ||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  31422568 gatccatcgaagatgattggtggtaggcgtgccatgactcagagtcaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 31422664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 202 - 273
Target Start/End: Complemental strand, 40357305 - 40357234
Alignment:
Q  202 gagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||| ||||| |||||||||||  | ||||| ||||||||||| |||||||||||||||||||||    
T  40357305 gagtacctgaactatcaggatcaggtacagtatgatgtgacggatggtggatatgaccaggatcatatacca 40357234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 238
Target Start/End: Complemental strand, 11049640 - 11049559
Alignment:
Q  154 gctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatg 238  Q
    |||||||| ||||||||||| ||||||||||  |||| |||   ||||||||||||||||||||| |||||||||||||| ||||    
T  11049640 gctacacatcctgaagagtcacaggtggttggcccgaccca---ggtggagtacctgaattatcaggatcaggtacaccatgatg 11049559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 49165913 - 49166009
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    ||||| || ||||||||||||||||||| ||| || ||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  49165913 gatccttcgaagatgattggtggtaggcgtgccataactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 49166009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 70
Target Start/End: Complemental strand, 3185068 - 3185018
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccgg 70  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||    
T  3185068 gatccatctaagatgattggtggtatgcgtgcgatgactcagagccaccgg 3185018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 20 - 78
Target Start/End: Complemental strand, 11049784 - 11049726
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagag 78  Q
    |||||||||||||||||||||||||||| ||| ||||| ||||||||||| | ||||||    
T  11049784 gatccatctaagatgattggtggtaggcgtgctatgacacaaagccaccgaaaggagag 11049726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 49091300 - 49091396
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| | |||||| || |  | |||||||||||| |||| |||||||||||    
T  49091300 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcaaggagagacagattgcccacatcccaaagaggggtagaggtcgga 49091396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 66
Target Start/End: Complemental strand, 50022787 - 50022741
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagcca 66  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||    
T  50022787 gatccatttaagatgattggtggtaggcgtgcaatgactcaaagcca 50022741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 20 - 83
Target Start/End: Complemental strand, 21537680 - 21537617
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaa 83  Q
    |||||||||||||| ||||||||||||| ||| ||||| ||||| |||| || ||||||| |||    
T  21537680 gatccatctaagataattggtggtaggcgtgctatgacacaaagtcaccagaaggagaggaaaa 21537617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 300
Target Start/End: Complemental strand, 36655599 - 36655320
Alignment:
Q  15 tcatcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcg 113  Q
    |||| |||||||||||||||||||||||||||| |||||||| | | ||       ||||||||||||||||||||||||||||| |||| |||||||||    
T  36655599 tcattgatccatctaagatgattggtggtaggcgtgcgatgaattagag-------agggagaggcaaagcggccacatcccaaagaggggtagaggtcg 36655507  T
Q  114 gatggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaat 213  Q
    || |||||||||||||||||||||| | |||||| ||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  36655506 gagggtggatgtttcagggagttcgcaagaggcttctcaggctacacaacctgaagagtcacaggtggttgatccgagccagcaggtggagtacctgaat 36655407  T
Q  214 tatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgat 300  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36655406 tatcaggatcaggtacaccacgacgttacagatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgat 36655320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 39948463 - 39948745
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||| || |||||||| ||    
T  39948463 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagccaccggagggaaaggcagagcggccacatcccaaagaggggtaaaggtcggaggg 39948562  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||||    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39948563 gagatggttcagggagtgaacaggaggcttctcaggctacacagcctaaagagtcgcaggtggttgatccgagccagcaggtggagtacctgaattatca 39948662  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || |||||||| |||||||| |||||||||||| ||||||| ||||||||||| |||||||    
T  39948663 ggatcaggtacaccacgatgtgactgatggtggatatgaccatgatcatataccacagcagcagcatgtaggagacgatgatg 39948745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 10828213 - 10827946
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| ||||||||||| |||| ||||||||||| ||    
T  10828213 gatccatctaagatgattggtggtaggcgtgcgatgattcaaagccaccggagggagaggcagagcggtcacatcccaaagaggggtagaggtcggaggg 10828114  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||| ||||||||| ||            |||||||||||||||||| |||||  |||| ||||| |  || |    |||||||||||||||||||||    
T  10828113 gagatggttcagggagctc------------tcaggctacacagcctgaggagtcataggttgttgacc--agtctgg-ggtggagtacctgaattatca 10828029  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||    
T  10828028 agatcaggtacaccacgatgtgacagatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagacgatgatg 10827946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 20 - 273
Target Start/End: Original strand, 45429453 - 45429710
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  45429453 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 45429552  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agcc-----aaca------ggtgga 203  Q
      |||| ||||||||| |            ||||||||||||||||||| ||||| ||||| ||||| |||    ||||     | ||      ||||||    
T  45429553 gagatggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttgacccgtcacagcctgttgaccagtctggggtgga 45429640  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  45429641 gtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatatacca 45429710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 29400595 - 29400492
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||| |||| |||    
T  29400595 ggtggagtacctgaattatcatgatcaggtacaccacgatgtgacggatggtgggtatgaccagaatcatataccacagcagcaacatgtaagagacgat 29400496  T
Q  298 gatg 301  Q
    ||||    
T  29400495 gatg 29400492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 25 - 152
Target Start/End: Complemental strand, 45136511 - 45136383
Alignment:
Q  25 atctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtggat 123  Q
    ||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||||| |||||||||||| |||| ||||||||||| | |||||    
T  45136511 atctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagagacaaagcgaccacatcccaaagaggggtagaggtcggaggatggat 45136412  T
Q  124 gtttcagggagttcgtaggaggctgctca 152  Q
    | ||||||||||||| | |||||| ||||    
T  45136411 ggttcagggagttcgcaagaggcttctca 45136383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 29400808 - 29400712
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||| |||| |||||||||||    
T  29400808 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcagccacatcccaaagaggggtagaggtcgga 29400712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 202 - 301
Target Start/End: Original strand, 7187817 - 7187916
Alignment:
Q  202 gagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||||| ||||||||||| |||||||    
T  7187817 gagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtggatatgaccaggatcatataccacaacagcagcatgtaggagacgatgatg 7187916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 28469503 - 28469599
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||| ||||||||||||| ||||||||| || |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  28469503 gatccatctaagataattggtggtaggcgtgcgatgacccagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 28469599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 17421573 - 17421656
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  17421573 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 17421656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 17421391 - 17421485
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcg 113  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||  |||||||||||||||| |||| |||||||||    
T  17421391 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagaggcagggcggccacatcccaaagaggggtagaggtcg 17421485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 15831997 - 15832093
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || || |||||||||||||| |||| |||||||||||    
T  15831997 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtggccacatcccaaagaggggtagaggtcgga 15832093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 15832179 - 15832254
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  15832179 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggatggtggatatgaccaggatcatatacca 15832254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 133
Target Start/End: Complemental strand, 25515094 - 25514980
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||| ||||||||||||| ||||||||| |||||||||||||  |||||||||  ||| ||||||||||| ||||  |||||| ||| ||    
T  25515094 gatccatctaagataattggtggtaggcgtgcgatgacacaaagccaccggaatgagaggcaagacgggcacatcccaaagaggggaagaggttggaggg 25514995  T
Q  119 tggatgtttcaggga 133  Q
     ||||| ||||||||    
T  25514994 gggatggttcaggga 25514980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 5353016 - 5353091
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  5353016 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 5353091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 20931620 - 20931695
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||||||||| |||||||| ||||||||||||    
T  20931620 ggtggagtacctgaactatcaggatcaggtacagcatgatgtgacggatggtggatatgaccaagatcatatacca 20931695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 30495958 - 30495883
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  30495958 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 30495883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 43538749 - 43538674
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  43538749 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 43538674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 3939933 - 3939837
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  3939933 gatccatcaaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 3939837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 30496140 - 30496044
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  30496140 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 30496044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 43979399 - 43979495
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  43979399 gatccatcgaggatgattggtggtaggcgtgctatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 43979495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 3939751 - 3939676
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||| ||||||||||||||    
T  3939751 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgactaggatcatatacca 3939676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 43979581 - 43979656
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| |||||| |||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  43979581 ggtggagtacctgaactatcaggatcagatacatcatgatgtgacggacggtggatatgaccaggatcatatacca 43979656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 43538941 - 43538835
Alignment:
Q  10 ggacatcatcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttaga 108  Q
    |||| |||| |||||||| | ||||||||||||||||| ||| |||||||| |||||||| | |||||| || || | |||||||||||| |||| ||||    
T  43538941 ggacctcattgatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcatggagagacagagtgcccacatcccaaagaggggtaga 43538842  T
Q  109 ggtcgga 115  Q
    |||||||    
T  43538841 ggtcgga 43538835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 5352834 - 5352930
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | |||||||||||| |||| |||||||||||    
T  5352834 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagattgcccacatcccaaagaggggtagaggtcgga 5352930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 187; Significance: 1e-101; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 5303450 - 5303168
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| | |   |||||||||| ||    
T  5303450 gatctatctaagatgattggtggtaggcgtgcgatgactcaaagccaccggaaggagaggcaaagcgggcacatcccaaagatgagaagaggtcggaggg 5303351  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| ||||||||||||| | |||||| ||||| |||||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  5303350 tggatggttcagggagttcgcaagaggcttctcagactacacagcctgaagagtcgcaggtggttgattcgagccagcagggggagtacctgaattatca 5303251  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||| |||||||||||    
T  5303250 ggatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatgccagagcatcaacatatagcagatgatgatg 5303168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 43188911 - 43189192
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| ||| |||||||| |||||  ||| ||||||||||||||||||||||||||| | || ||||||||||| ||    
T  43188911 gatccatctaagatgattggtggtaggcgtgcaatgactcagagccag-ggatggagaggcaaagcggccacatcccaaagaagggtagaggtcggaggg 43189009  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||| ||| |||| |||||||| ||||||||||||||| |||||||||| ||||| ||||||||||||| || || |||||||||||||||||    
T  43189010 tggatggttcatggaattcgcaggaggcttctcaggctacacagcttgaagagtcgtaggtgattgatccgagccagcaagtagagtacctgaattatca 43189109  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  43189110 ggatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatatcagagcagcaacatgtaggagatgatgatg 43189192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 10 - 281
Target Start/End: Complemental strand, 39846220 - 39845946
Alignment:
Q  10 ggacatcatcgatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagg--gagaggcaaagcggccacatcccaaa-agggtta 106  Q
    |||| |||| |||||||||||||||||||||||||||| ||| |||||||| ||||| ||||||  |||||||||||||||||||||||||| |||| ||    
T  39846220 ggacctcattgatccatctaagatgattggtggtaggcgtgcaatgactcagagccatcggaggaagagaggcaaagcggccacatcccaaagaggggta 39846121  T
Q  107 gaggtcggatggtggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagta 206  Q
     |||||| |  ||||||| ||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||    
T  39846120 aaggtcgtagtgtggatggttcagggagttcgcaggaggcttctcaggctacacaacctgaagagtcgcaggtggttgacccgagccagcaggtggagta 39846021  T
Q  207 cctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  39846020 cctgaattatcaggatcaggtacaccacgatgttacggatggtgggtatgaccaagatcatataccacagcagca 39845946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 8e-92
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 35552505 - 35552787
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||  |||||||||| ||    
T  35552505 gatccatctaagatgattggtggtagacgtgcgatgactcaaagccaccggaagaagaggcaaagcgggcacatcccaaagaggggaagaggtcggaggg 35552604  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||| | |||||| |||||||||||||||||||||||||||| ||||||||| |||||||  ||||||||||||||||||||||    
T  35552605 gggatggttcagggacttcgcacgaggcttctcaggctacacagcctgaagagtcgcatgtggttgattcgagccaggaggtggagtacctgaattatca 35552704  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || | ||||||||||||||||||||||||| |||||||||| ||| ||| |||||||||||    
T  35552705 ggatcaggtacaccacgatgtgactggtggtgggtatgaccaggatcatatatcagagcagcatcatatagcagatgatgatg 35552787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 34822226 - 34821944
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||  ||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||  |||||||||| ||    
T  34822226 gatccatctaagatgatatgtggtaggcgtgcgatgactcaaagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcggaggg 34822127  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| |||||||| || |||||||||||||||||||||||||||||||| |||| |||||  ||||||||||||||||||||||    
T  34822126 tggatggttcagggacttcgcaggaggcttcttaggctacacagcctgaagagtcgcaggtggttcatccaagccaggaggtggagtacctgaattatca 34822027  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||| ||||||||||| |||| || ||||||||||||||||| ||||||||||||||| |||||||| ||  |||||||||||    
T  34822026 ggattaggtacaccacaatgtgactgatggtgggtatgaccatgatcatataccagagtagcaacatataacagatgatgatg 34821944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 40076467 - 40076185
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| || |||||||||||||||||| | ||||||||||||| | ||||| ||||| ||||  |||||||||| ||    
T  40076467 gatccatctaaaatgattggtggtaggcgtgtgatgactcaaagccaccgaaaggagaggcaaagcaggcacattccaaataggggaagaggtcggaggg 40076368  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||| |||||||| |||| |||||||| |||||||||||||| | ||||| ||||| ||||| |||||||| ||  ||||||||||||||||||||||    
T  40076367 tggatggttcagggacttcgcaggaggcttctcaggctacacagtcagaagattcgcaagtggtcgatccgagtcaggaggtggagtacctgaattatca 40076268  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     |||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||  |||||||||||    
T  40076267 ggatcaggtacaccacgatgtgactgatagtgggtatgaccaggatcatataccagagcagcaacatataacagatgatgatg 40076185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 193
Target Start/End: Original strand, 20858125 - 20858299
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||  ||||||||||  |    
T  20858125 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcaaagcggtcacatcccaaagaggggaagaggtcggagag 20858224  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagcc 193  Q
    |||||| ||||||||||||  |||||||| |||| |||||||||||||||||||||||||||||||||| |||||    
T  20858225 tggatggttcagggagttcacaggaggcttctcaagctacacagcctgaagagtcgcaggtggttgatctgagcc 20858299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 41249318 - 41249055
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    ||||||||||| |||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||| || | ||||||||||| ||    
T  41249318 gatccatctaaaatgattggtggtaggcgtgcgatgacccaaagccaccggagggagaggcagagcggccacatcccaaagagaggtagaggtcggaggg 41249219  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
      |||  ||||||||||||            |||||||||||||| ||| ||||| ||||| ||||| |||        |||||||||||||||||||||    
T  41249218 gagatagttcagggagttc------------tcaggctacacagcttgaggagtcacaggttgttgacccgtctgt---ggtggagtacctgaattatca 41249134  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
     |||||||||||||||||| | || |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  41249133 ggatcaggtacaccacgatatgactgatggtgggtatgaccaggatcatataccacagcagcaacatgtaggagatgat 41249055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 20 - 224
Target Start/End: Original strand, 45128579 - 45128785
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||| ||||| || |||||| ||||||||||||| |||||||||| |||| ||||||||||| ||||  ||||||| || ||    
T  45128579 gatccatctaagatgattggtgataggcgtgagatgacacaaagccaccggaaggagaggcaaggcgggcacatcccaaagaggggaagaggtcagaggg 45128678  T
Q  119 tgga-tgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatc 217  Q
     ||| || |||||| | |||  ||||||||| |||||||| ||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  45128679 gggaatggttcaggtacttctcaggaggctgttcaggctagacagcctgaagagtcgcaggtggttgacccgagccaggaggtggagtacctgaattatc 45128778  T
Q  218 aagatca 224  Q
    | |||||    
T  45128779 aggatca 45128785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 20 - 281
Target Start/End: Original strand, 37327686 - 37327942
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||| ||||| |||||||||||| || || ||||  ||||||||||| ||| |||||||||| |||| ||||||||||| ||    
T  37327686 gatccatctaagatgattggtgataggcgtgcgatgactcagagtcatcggaaagagaggcaaaggggc-acatcccaaagaggggtagaggtcggaggg 37327784  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||  | |   || |||| ||||||||||||||||||||||| |||||| | |||| |||  ||||||||||  ||||||||||    
T  37327785 gggatggttcagggacttctcatg---cttctcaagctacacagcctgaagagtcgcatgtggttaacccgacccaggaggtggagtatttgaattatca 37327881  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
     |||||||||||||||||||| || ||||  |||||||| ||||||||||||| |||||||||    
T  37327882 ggatcaggtacaccacgatgtgactgatg--gggtatgatcaggatcatatactagagcagca 37327942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 20 - 285
Target Start/End: Original strand, 5677899 - 5678156
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||  ||||||||| ||||||||||||| ||||||| |||||||  |||||||||| ||||  |||||||||| ||    
T  5677899 gatccatctaagatgattggtggtaggtgtgcgatgacacaaagccaccggaaggagaggtaaagcgggaacatcccaaagaggggaagaggtcggaggg 5677998  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||| ||| |||     ||||| ||||||||||||||||||||||||| ||||||||||| ||||||   |||||||||||||||||||||||    
T  5677999 gggatggttcaaggatttc---tcaggcttctcaggctacacagcctgaagagtcacaggtggttgacccgagc---caggtggagtacctgaattatca 5678092  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggat---catataccagagcagcaacat 285  Q
     |||      ||||| ||||| || ||||||||||||||  || ||   |||||||||||||||||||||    
T  5678093 ggat------caccatgatgtcactgatggtgggtatgatgagcatcagcatataccagagcagcaacat 5678156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 301
Target Start/End: Original strand, 39252862 - 39253147
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||| | ||| |||||||| ||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  39252862 gatccatctaagatgattggtggtagacgtgcaatgactcagagccaccagagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 39252961  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agc-----caacag------gtgga 203  Q
      |||| ||||||||| |            ||||||||||||||||||| ||||| ||||| ||||| |||    |||      | |||      |||||    
T  39252962 gagatggttcagggagct------------ctcaggctacacagcctgaggagtcacaggttgttgacccgtcacagcttcttgaccagtctggggtgga 39253049  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||| ||||||||||||||||||||| | ||||| |||||||||||||||||||    
T  39253050 gtacctgaattatcaggatcaggtacaccacgatgtgactgatggtggatatgaccaggatcatataccacaacagcagcatgtaggagatgatgatg 39253147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 39938429 - 39938144
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| || ||||||||| || ||||||||||||||| | ||||||||| ||||||| |||| ||||||||||| ||    
T  39938429 gatccatctaagatgattggtggtaggcgtgtgatgactcagagtcaccggagggagaggtagagcggccacgtcccaaagaggggtagaggtcggaggg 39938330  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccg----agcc-----aacag------gtgga 203  Q
      |||| ||||||||| ||            |||||||||||||||||| ||||| || |||||||| |||    |||      | |||      |||||    
T  39938329 gagatggttcagggagctc------------tcaggctacacagcctgaggagtcacatgtggttgacccgtcacagcttgttgaccagtctagagtgga 39938242  T
Q  204 gtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||    
T  39938241 gtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacaacagcaacatgtaggagacgatgatg 39938144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 34369581 - 34369478
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||    
T  34369581 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagacgat 34369482  T
Q  298 gatg 301  Q
    ||||    
T  34369481 gatg 34369478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 198 - 301
Target Start/End: Complemental strand, 34370909 - 34370806
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||| ||||||||||| |||    
T  34370909 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacagcagcagcatgtaggagacgat 34370810  T
Q  298 gatg 301  Q
    ||||    
T  34370809 gatg 34370806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 198 - 301
Target Start/End: Original strand, 43212550 - 43212653
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgat 297  Q
    ||||||||||||||||||||| |||||||||||||||||||  || |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||    
T  43212550 ggtggagtacctgaattatcaggatcaggtacaccacgatgcgactgatggtggatatgaccaggatcatataccacagcagcaacatgtaggagacgat 43212649  T
Q  298 gatg 301  Q
    ||||    
T  43212650 gatg 43212653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 15035938 - 15035842
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  15035938 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 15035842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 39602450 - 39602546
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| |||||||||||    
T  39602450 gatccatctaagatgattggtggtaggcgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcgga 39602546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 198 - 293
Target Start/End: Original strand, 39602632 - 39602727
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggaga 293  Q
    ||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||||| | ||||| |||||||||||    
T  39602632 ggtggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccaggatcatataccacaacagcagcatgtaggaga 39602727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 20 - 134
Target Start/End: Original strand, 43212368 - 43212483
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||||||| ||    
T  43212368 gatccatctaagatgattggtggtaggtgtgcgatgactcagagccaccggagggagaggcagagcggccacatcccaaagaggggtagaggtcggaggg 43212467  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  43212468 gagatggttcagggag 43212483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 152 - 281
Target Start/End: Original strand, 2985103 - 2985228
Alignment:
Q  152 aggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgg 251  Q
    ||||||||||||||||| |||| ||||||||||| |||| |||   || |||||||||||||||||| ||| |||||||||||||||| || ||||||||    
T  2985103 aggctacacagcctgaa-agtcacaggtggttgacccgaccca---ggaggagtacctgaattatcaggattaggtacaccacgatgtcactgatggtgg 2985198  T
Q  252 gtatgaccaggatcatataccagagcagca 281  Q
    |||||||||| | |||||||||||||||||    
T  2985199 gtatgaccagcaacatataccagagcagca 2985228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 34369748 - 34369633
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||| |||||||||||| |||| ||||||||||| ||    
T  34369748 gatccatctaagatgattggtggtaggcgtgcgatgactcagagtcaccggagggagaggcagagcgaccacatcccaaagaggggtagaggtcggaggg 34369649  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  34369648 gagatggttcagggag 34369633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 34371076 - 34370961
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| |||| |||||||||||| |||| ||||||||||| ||    
T  34371076 gatccatctaagatgattggtggtaggcgtgcgatgactcagagtcaccggagggagaggcagagcgaccacatcccaaagaggggtagaggtcggaggg 34370977  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  34370976 gagatggttcagggag 34370961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 20 - 102
Target Start/End: Original strand, 45065095 - 45065177
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaaagg 102  Q
    |||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||||| ||||||||||||||||||||    
T  45065095 gatccatctaagatgattggtggtaggcgtgcgatgactcagagtcaccggagggagaggcagagcggccacatcccaaaagg 45065177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 42484793 - 42484697
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||| || | ||||||||||||||| |||| |||||||||||    
T  42484793 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagaacggccacatcccaaagaggggtagaggtcgga 42484697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 45065237 - 45065319
Alignment:
Q  199 gtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    |||||||||||||| ||||| ||||||||||| || ||||| || |||||||| ||||||||||||||||||||| |||||||    
T  45065237 gtggagtacctgaactatcaggatcaggtacagcatgatgtgactgatggtggatatgaccaggatcatataccacagcagca 45065319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 200 - 281
Target Start/End: Complemental strand, 15035754 - 15035673
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||| ||||| ||||||||||| || ||||| || |||||||| ||||||||||||||||||||| |||||||    
T  15035754 tggagtacctgaactatcaggatcaggtacagcatgatgtgactgatggtggatatgaccaggatcatataccacagcagca 15035673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 24549 - 24474
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  24549 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 24474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 488730 - 488655
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  488730 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 488655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 1053586 - 1053661
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  1053586 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 1053661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 23021332 - 23021257
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  23021332 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 23021257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 26660508 - 26660583
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  26660508 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 26660583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 42484611 - 42484536
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||| ||||| || ||||| ||||||||||| |||||||||||||||||||||    
T  42484611 ggtggagtacctgaactatcaggatcaagtacatcatgatgtgacggatggtggatatgaccaggatcatatacca 42484536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 488912 - 488816
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  488912 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 488816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 1053404 - 1053500
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  1053404 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 1053500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 23021514 - 23021418
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  23021514 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 23021418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 26660326 - 26660422
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  26660326 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 26660422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 24731 - 24635
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || |  | |||||||||||| |||| |||||||||||    
T  24731 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagattgcccacatcccaaagaggggtagaggtcgga 24635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 20 - 66
Target Start/End: Original strand, 2984982 - 2985028
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagcca 66  Q
    |||||||||||||||||||||||||||| ||  ||||| ||||||||    
T  2984982 gatccatctaagatgattggtggtaggcgtggtatgacacaaagcca 2985028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 175; Significance: 3e-94; HSPs: 15)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 20 - 301
Target Start/End: Complemental strand, 6319774 - 6319492
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||| ||||||||||| ||||  |||||||| | ||    
T  6319774 gatccatctaagatgattggtggtaggcgtgcgatgactcaaagccatcggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcgtacgg 6319675  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
    |||||  |||||||| |||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  6319674 tggatagttcagggacttcgcaggaggcttctcaggctacacagcctgaagagtcgcatgtggttgatccgagccaggaggtggagtacctgaattatca 6319575  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
     ||| | |||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||    
T  6319574 ggataatgtacaccatgatgtgactgatggtgggtatgaccaggatcatataccagagcagcagcatatagcagatgatgatg 6319492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 24722732 - 24722989
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||||||||| ||||| ||||| ||||  ||||||  ||  |    
T  24722732 gatccatctaagatgattggtggtaggcgtgcgatgactcaaacccaccagaaggagaggcaaagcgggcacattccaaagaggggaagaggttagagag 24722831  T
Q  119 tggatgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatca 218  Q
     ||||| |||||||| |||| |||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  24722832 gggatggttcagggacttcgcaggaggcttctcaggctacacagccttaagagtcgcaggtggttgatctgagccaggaggtggagtacctgaattatca 24722931  T
Q  219 agatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagag 276  Q
    ||||||||||||||||||||| ||  ||||||||||||||||||||||||||||||||    
T  24722932 agatcaggtacaccacgatgtgactaatggtgggtatgaccaggatcatataccagag 24722989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 200 - 284
Target Start/End: Complemental strand, 24087779 - 24087695
Alignment:
Q  200 tggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaaca 284  Q
    ||||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||| |||||||||| ||||||||||||    
T  24087779 tggagtacctgaattatcaggatcaggtacaccacgatgtgactgatggtgggtatgaccatgatcatatactagagcagcaaca 24087695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 113
Target Start/End: Original strand, 27617595 - 27617689
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcg 113  Q
    |||||||| ||||||||||||||||||| ||| |||||||| |||||||| |||||||||||  |||||||||||||||| |||| |||||||||    
T  27617595 gatccatcgaagatgattggtggtaggcgtgccatgactcagagccaccgtagggagaggcagggcggccacatcccaaagaggggtagaggtcg 27617689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 24087963 - 24087884
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa 99  Q
    |||| ||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||| | | |||||||||||    
T  24087963 gatctatctaagatgattggtggtaggcgtgcgatgacccaaagccaccggaaggagaggcaaaacaggcacatcccaaa 24087884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 27617777 - 27617860
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagca 281  Q
    ||||||||||||||| |||||  |||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  27617777 ggtggagtacctgaactatcagaatcaggtacagcatgatgtgacggatggtggatatgaccaggatcatataccacagcagca 27617860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 6202210 - 6202285
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  6202210 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 6202285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 11689177 - 11689252
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  11689177 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 11689252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Original strand, 22302242 - 22302317
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  22302242 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 22302317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 198 - 273
Target Start/End: Complemental strand, 30828663 - 30828588
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgttacggatggtgggtatgaccaggatcatatacca 273  Q
    ||||||||||||||| ||||| ||||||||||| || ||||| ||||| ||||| |||||||||||||||||||||    
T  30828663 ggtggagtacctgaactatcaggatcaggtacatcatgatgtgacggacggtggatatgaccaggatcatatacca 30828588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 6202028 - 6202124
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  6202028 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 6202124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 11688995 - 11689091
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  11688995 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 11689091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Original strand, 22302060 - 22302156
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  22302060 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 22302156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 20 - 115
Target Start/End: Complemental strand, 30828845 - 30828749
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcgga 115  Q
    |||||||| | ||||||||||||||||| ||| |||||||| |||||||| |||||||| || || | |||||||||||| |||| |||||||||||    
T  30828845 gatccatcgaggatgattggtggtaggcgtgccatgactcagagccaccgcagggagagacagagtgcccacatcccaaagaggggtagaggtcgga 30828749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 21601435 - 21601476
Alignment:
Q  149 ctcaggctacacagcctgaagagtcgcaggtggttgatccga 190  Q
    |||||||||||||||||||| |||||||||||||||| ||||    
T  21601435 ctcaggctacacagcctgaacagtcgcaggtggttgacccga 21601476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 24 - 301
Target Start/End: Complemental strand, 18162 - 17884
Alignment:
Q  24 catctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatggtgga 122  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||||||| ||||||||||||||  ||||||| ||| ||||  |||||||||| |||||     
T  18162 catctaagatgattgttggtaggcgtgcaatgactcaaagccaccggaaggagaggcaaagcgagcacatcctaaagaggggaagaggtcggagggtggg 18063  T
Q  123 tgtttcagggagttcgtaggaggctgctcaggctacacagcctgaagagtcgcaggtggttgatccgagccaacaggtggagtacctgaattatcaagat 222  Q
    || ||||||||||||| |||||||| |||||| ||||||||||||| ||||| |||||| |||||||| ||| ||||||||||||||||||||||| |||    
T  18062 tggttcagggagttcgcaggaggcttctcaggatacacagcctgaaaagtcgtaggtgggtgatccgaaccagcaggtggagtacctgaattatcaggat 17963  T
Q  223 caggtacaccacgatgttacggatggtgggtatgaccaggatcatataccagagcagcaacatgtaggagatgatgatg 301  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||||| ||| ||| |||||||||||    
T  17962 caggtacaccacgatgtgaccgatagtgggtatgaccaggatcatataccaaagcagcagcatatagaagatgatgatg 17884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 134
Target Start/End: Complemental strand, 14832 - 14717
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||| |||| |||||||||||| | |||||||||||||| ||    
T  14832 gatccatctaagatgattggtgatagacgtgcgatgactcagagccaccggagggagaggcagagcgcccacatcccaaagaaggttagaggtcggaagg 14733  T
Q  119 tggatgtttcagggag 134  Q
      |||| |||||||||    
T  14732 gagatggttcagggag 14717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 198 - 239
Target Start/End: Complemental strand, 14650 - 14609
Alignment:
Q  198 ggtggagtacctgaattatcaagatcaggtacaccacgatgt 239  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  14650 ggtggagtacctgaattatcaggatcaggtacaccacgatgt 14609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 20 - 133
Target Start/End: Original strand, 11124 - 11238
Alignment:
Q  20 gatccatctaagatgattggtggtaggcctgcgatgactcaaagccaccggagggagaggcaaagcggccacatcccaaa-agggttagaggtcggatgg 118  Q
    |||||||||||||||||||||||| ||  || |||||| ||||||||||||| ||||||||||||||| ||||||||||| ||||  |||||||||| ||    
T  11124 gatccatctaagatgattggtggtcggtgtgtgatgacacaaagccaccggaaggagaggcaaagcgggcacatcccaaagaggggaagaggtcggaggg 11223  T
Q  119 tggatgtttcaggga 133  Q
      |||| ||||||||    
T  11224 gtgatggttcaggga 11238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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