View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5742_low_50 (Length: 215)

Name: NF5742_low_50
Description: NF5742
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5742_low_50
NF5742_low_50
[»] scaffold0133 (1 HSPs)
scaffold0133 (5-215)||(3720-3929)
[»] chr4 (25 HSPs)
chr4 (5-215)||(13449051-13449260)
chr4 (15-209)||(5407109-5407301)
chr4 (5-155)||(47470431-47470582)
chr4 (6-127)||(18241313-18241434)
chr4 (16-151)||(41258480-41258615)
chr4 (6-155)||(19557260-19557407)
chr4 (5-164)||(10239528-10239688)
chr4 (3-131)||(14569330-14569456)
chr4 (15-155)||(13596117-13596256)
chr4 (70-155)||(50224253-50224339)
chr4 (16-164)||(5373203-5373351)
chr4 (5-152)||(41919349-41919495)
chr4 (5-100)||(12729333-12729428)
chr4 (16-119)||(54366182-54366284)
chr4 (55-152)||(12136383-12136481)
chr4 (16-106)||(12246382-12246471)
chr4 (16-105)||(18274749-18274837)
chr4 (17-106)||(41168061-41168150)
chr4 (17-117)||(7188063-7188163)
chr4 (56-152)||(19624132-19624229)
chr4 (16-118)||(42706723-42706826)
chr4 (17-104)||(15116449-15116536)
chr4 (73-128)||(17194572-17194627)
chr4 (17-106)||(13814990-13815079)
chr4 (73-156)||(17378286-17378371)
[»] scaffold0148 (1 HSPs)
scaffold0148 (5-215)||(35850-36058)
[»] chr6 (24 HSPs)
chr6 (5-215)||(19670462-19670672)
chr6 (5-215)||(31469552-31469759)
chr6 (6-155)||(15006727-15006876)
chr6 (5-155)||(34964858-34965008)
chr6 (3-132)||(29603499-29603628)
chr6 (15-164)||(29163002-29163152)
chr6 (3-110)||(19852224-19852331)
chr6 (5-164)||(22595747-22595908)
chr6 (16-117)||(12311139-12311239)
chr6 (5-132)||(22846049-22846174)
chr6 (17-180)||(23218920-23219083)
chr6 (56-131)||(17858490-17858565)
chr6 (17-106)||(7830056-7830145)
chr6 (56-155)||(22468205-22468305)
chr6 (10-132)||(16889924-16890046)
chr6 (56-130)||(16131234-16131307)
chr6 (16-132)||(17085670-17085784)
chr6 (16-106)||(21927385-21927475)
chr6 (39-108)||(33540377-33540444)
chr6 (15-131)||(16373924-16374039)
chr6 (44-108)||(25369583-25369646)
chr6 (5-108)||(25649181-25649283)
chr6 (17-106)||(21411542-21411631)
chr6 (16-108)||(6092467-6092558)
[»] scaffold0165 (1 HSPs)
scaffold0165 (5-215)||(20072-20281)
[»] scaffold0001 (1 HSPs)
scaffold0001 (6-214)||(141292-141500)
[»] chr7 (36 HSPs)
chr7 (5-215)||(28388391-28388600)
chr7 (52-211)||(18921107-18921266)
chr7 (5-155)||(17948123-17948273)
chr7 (5-180)||(21677569-21677743)
chr7 (3-132)||(4482192-4482321)
chr7 (15-131)||(28717982-28718097)
chr7 (5-132)||(31499171-31499300)
chr7 (5-126)||(20587746-20587867)
chr7 (5-155)||(9323155-9323305)
chr7 (55-164)||(17922962-17923073)
chr7 (5-132)||(33555600-33555728)
chr7 (3-163)||(39294240-39294402)
chr7 (16-117)||(9609182-9609283)
chr7 (15-155)||(9640989-9641128)
chr7 (16-117)||(9836754-9836855)
chr7 (16-132)||(48345526-48345640)
chr7 (5-132)||(14938634-14938761)
chr7 (5-132)||(15366227-15366354)
chr7 (17-152)||(12245631-12245765)
chr7 (5-118)||(9058754-9058867)
chr7 (16-117)||(14279038-14279138)
chr7 (5-137)||(16381839-16381969)
chr7 (16-117)||(34243274-34243375)
chr7 (15-127)||(4436822-4436936)
chr7 (5-127)||(4444212-4444337)
chr7 (16-106)||(5617394-5617484)
chr7 (17-106)||(10863065-10863154)
chr7 (57-131)||(13460346-13460419)
chr7 (60-130)||(15980636-15980705)
chr7 (16-101)||(16915587-16915672)
chr7 (5-110)||(18081442-18081545)
chr7 (56-131)||(3194142-3194217)
chr7 (17-103)||(16651365-16651451)
chr7 (17-103)||(17625725-17625811)
chr7 (16-117)||(16930097-16930198)
chr7 (16-117)||(16935480-16935581)
[»] chr1 (23 HSPs)
chr1 (5-210)||(18164137-18164340)
chr1 (5-164)||(40555301-40555461)
chr1 (5-165)||(46143704-46143866)
chr1 (7-155)||(41213756-41213903)
chr1 (15-155)||(5770293-5770432)
chr1 (16-164)||(5472479-5472630)
chr1 (5-155)||(33383848-33383998)
chr1 (5-132)||(50002066-50002193)
chr1 (5-127)||(29217083-29217204)
chr1 (16-117)||(21193099-21193200)
chr1 (5-151)||(78592-78739)
chr1 (5-164)||(21041718-21041879)
chr1 (15-128)||(52397597-52397708)
chr1 (15-132)||(9293520-9293636)
chr1 (16-105)||(20957176-20957264)
chr1 (5-133)||(12891446-12891573)
chr1 (17-106)||(22837754-22837844)
chr1 (16-101)||(37236109-37236193)
chr1 (5-110)||(40438459-40438563)
chr1 (17-110)||(20191702-20191794)
chr1 (17-100)||(25091013-25091095)
chr1 (16-117)||(22148536-22148636)
chr1 (17-108)||(36358450-36358541)
[»] scaffold0020 (1 HSPs)
scaffold0020 (5-210)||(103912-104111)
[»] chr8 (35 HSPs)
chr8 (5-215)||(19334047-19334257)
chr8 (15-164)||(20707725-20707874)
chr8 (5-132)||(18263525-18263651)
chr8 (96-215)||(21234041-21234161)
chr8 (15-154)||(18043250-18043388)
chr8 (5-164)||(33170177-33170337)
chr8 (5-155)||(23216583-23216731)
chr8 (16-117)||(15931261-15931363)
chr8 (6-137)||(22499421-22499551)
chr8 (5-104)||(24265921-24266019)
chr8 (16-155)||(29295817-29295954)
chr8 (6-132)||(7468228-7468351)
chr8 (5-152)||(24554675-24554823)
chr8 (18-132)||(22317441-22317554)
chr8 (15-164)||(45561793-45561945)
chr8 (5-131)||(24236958-24237083)
chr8 (5-94)||(27233352-27233441)
chr8 (15-155)||(23118938-23119077)
chr8 (5-88)||(21234192-21234275)
chr8 (15-155)||(22725532-22725671)
chr8 (16-117)||(37655779-37655881)
chr8 (16-118)||(26009369-26009471)
chr8 (70-164)||(17264487-17264583)
chr8 (53-151)||(22311030-22311129)
chr8 (5-152)||(17499783-17499931)
chr8 (56-152)||(25607876-25607972)
chr8 (16-152)||(16000121-16000254)
chr8 (16-108)||(5851438-5851531)
chr8 (16-164)||(11600011-11600160)
chr8 (59-152)||(22883768-22883861)
chr8 (70-131)||(11541998-11542059)
chr8 (17-106)||(17731678-17731768)
chr8 (16-106)||(22738117-22738207)
chr8 (16-101)||(17283173-17283258)
chr8 (70-102)||(23350163-23350195)
[»] chr5 (24 HSPs)
chr5 (5-165)||(24082041-24082202)
chr5 (5-155)||(5623514-5623665)
chr5 (7-155)||(23236506-23236654)
chr5 (5-132)||(3420952-3421079)
chr5 (3-132)||(29911971-29912100)
chr5 (7-164)||(19871842-19871999)
chr5 (16-117)||(24228075-24228175)
chr5 (3-163)||(14345757-14345918)
chr5 (59-164)||(23411967-23412073)
chr5 (5-125)||(26561914-26562033)
chr5 (53-152)||(11963569-11963669)
chr5 (61-164)||(20456649-20456754)
chr5 (15-124)||(22879834-22879941)
chr5 (5-127)||(16837860-16837981)
chr5 (16-101)||(21614949-21615033)
chr5 (17-127)||(11765837-11765945)
chr5 (16-106)||(21228523-21228613)
chr5 (5-106)||(28887817-28887919)
chr5 (56-128)||(37483114-37483186)
chr5 (17-106)||(23452807-23452895)
chr5 (17-106)||(23460051-23460139)
chr5 (17-106)||(23464312-23464400)
chr5 (56-131)||(37985817-37985892)
chr5 (17-105)||(430736-430824)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-132)||(99073-99200)
[»] chr3 (32 HSPs)
chr3 (5-155)||(43429635-43429785)
chr3 (5-199)||(31416270-31416463)
chr3 (5-155)||(21168801-21168952)
chr3 (19-164)||(6817720-6817866)
chr3 (5-155)||(22637258-22637406)
chr3 (15-132)||(4147813-4147931)
chr3 (5-132)||(4164365-4164492)
chr3 (6-155)||(41659542-41659692)
chr3 (5-164)||(12950495-12950657)
chr3 (15-165)||(6230744-6230895)
chr3 (15-132)||(18968014-18968129)
chr3 (70-164)||(10902470-10902566)
chr3 (6-117)||(33371499-33371610)
chr3 (3-152)||(15551996-15552146)
chr3 (16-152)||(5230712-5230848)
chr3 (5-132)||(17320699-17320824)
chr3 (59-155)||(37918977-37919074)
chr3 (7-152)||(8602233-8602379)
chr3 (5-107)||(14819971-14820072)
chr3 (17-131)||(15988468-15988579)
chr3 (5-110)||(14182532-14182637)
chr3 (4-131)||(17390930-17391056)
chr3 (70-130)||(40041679-40041739)
chr3 (16-117)||(34557807-34557907)
chr3 (16-102)||(55513848-55513933)
chr3 (17-108)||(14061399-14061490)
chr3 (56-131)||(25106457-25106532)
chr3 (17-103)||(25769156-25769242)
chr3 (15-164)||(17760891-17761037)
chr3 (15-164)||(19062211-19062357)
chr3 (70-110)||(8687860-8687900)
chr3 (70-110)||(9039729-9039769)
[»] scaffold0480 (1 HSPs)
scaffold0480 (5-175)||(11076-11247)
[»] scaffold0219 (2 HSPs)
scaffold0219 (5-124)||(26144-26263)
scaffold0219 (81-155)||(26065-26140)
[»] scaffold0387 (1 HSPs)
scaffold0387 (5-132)||(3145-3273)
[»] chr2 (17 HSPs)
chr2 (15-155)||(24271985-24272125)
chr2 (3-130)||(30995102-30995230)
chr2 (5-129)||(6092379-6092501)
chr2 (73-163)||(18533352-18533444)
chr2 (15-117)||(43640287-43640388)
chr2 (16-118)||(19436054-19436155)
chr2 (17-106)||(23823642-23823730)
chr2 (17-106)||(23825586-23825674)
chr2 (17-106)||(24089571-24089660)
chr2 (42-131)||(20270897-20270985)
chr2 (81-152)||(19643889-19643961)
chr2 (17-108)||(32738405-32738496)
chr2 (16-94)||(22137969-22138046)
chr2 (56-131)||(24839403-24839478)
chr2 (16-106)||(25303524-25303614)
chr2 (17-106)||(22582145-22582234)
chr2 (16-106)||(40642477-40642566)
[»] scaffold0004 (2 HSPs)
scaffold0004 (5-155)||(25478-25629)
scaffold0004 (70-125)||(84414-84469)
[»] scaffold0327 (1 HSPs)
scaffold0327 (5-155)||(6982-7132)
[»] scaffold0115 (1 HSPs)
scaffold0115 (3-164)||(19265-19427)
[»] scaffold0107 (1 HSPs)
scaffold0107 (16-117)||(11375-11476)
[»] scaffold0442 (2 HSPs)
scaffold0442 (6-118)||(2106-2217)
scaffold0442 (15-110)||(14250-14344)
[»] scaffold0174 (1 HSPs)
scaffold0174 (7-127)||(502-623)
[»] scaffold0010 (2 HSPs)
scaffold0010 (70-155)||(123520-123606)
scaffold0010 (16-117)||(29042-29143)
[»] scaffold0561 (1 HSPs)
scaffold0561 (17-132)||(4862-4976)
[»] scaffold0005 (1 HSPs)
scaffold0005 (3-131)||(247920-248046)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-117)||(99326-99426)
[»] scaffold0009 (2 HSPs)
scaffold0009 (56-164)||(99027-99137)
scaffold0009 (16-118)||(66481-66582)
[»] scaffold0193 (1 HSPs)
scaffold0193 (16-117)||(2881-2982)
[»] scaffold0047 (1 HSPs)
scaffold0047 (59-152)||(73383-73477)
[»] scaffold0017 (1 HSPs)
scaffold0017 (16-164)||(10223-10371)
[»] scaffold0236 (1 HSPs)
scaffold0236 (16-106)||(25514-25604)
[»] scaffold0088 (1 HSPs)
scaffold0088 (5-163)||(45668-45828)
[»] scaffold0006 (1 HSPs)
scaffold0006 (16-117)||(199478-199578)
[»] scaffold0025 (2 HSPs)
scaffold0025 (16-132)||(51250-51365)
scaffold0025 (56-131)||(2465-2539)
[»] scaffold0021 (2 HSPs)
scaffold0021 (28-157)||(19908-20037)
scaffold0021 (28-157)||(29484-29613)
[»] scaffold0080 (1 HSPs)
scaffold0080 (3-117)||(25747-25863)
[»] scaffold0028 (1 HSPs)
scaffold0028 (16-132)||(77671-77788)
[»] scaffold0331 (1 HSPs)
scaffold0331 (15-137)||(11291-11411)
[»] scaffold0601 (1 HSPs)
scaffold0601 (90-164)||(3461-3537)
[»] scaffold0032 (2 HSPs)
scaffold0032 (16-127)||(101921-102031)
scaffold0032 (5-132)||(106730-106857)
[»] scaffold1949 (1 HSPs)
scaffold1949 (16-90)||(1139-1212)
[»] scaffold0786 (1 HSPs)
scaffold0786 (16-94)||(4685-4762)
[»] scaffold0390 (2 HSPs)
scaffold0390 (16-98)||(3218-3299)
scaffold0390 (16-98)||(16202-16283)
[»] scaffold0357 (1 HSPs)
scaffold0357 (58-132)||(5708-5782)
[»] scaffold0138 (1 HSPs)
scaffold0138 (16-132)||(24547-24664)
[»] scaffold0216 (1 HSPs)
scaffold0216 (61-164)||(23195-23300)
[»] scaffold0151 (1 HSPs)
scaffold0151 (16-108)||(31788-31880)
[»] scaffold0013 (1 HSPs)
scaffold0013 (16-106)||(33415-33503)
[»] scaffold0808 (1 HSPs)
scaffold0808 (59-131)||(5326-5398)
[»] scaffold0503 (1 HSPs)
scaffold0503 (59-127)||(9347-9414)
[»] scaffold0022 (1 HSPs)
scaffold0022 (17-108)||(107529-107620)


Alignment Details
Target: scaffold0133 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 3929 - 3720
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||| |||||||||    
T  3929 cgaataatataatattcaagaaatagacgtcacgtcatcaacaaaatcctaaa-caacatgcatgtataaaaattctcaacagttgcagcagatataaac 3831  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  3830 catacacctcaaaagtatacatgtcatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatctataataaatcat 3731  T
Q  205 aagacaacatc 215  Q
    |||||||||||    
T  3730 aagacaacatc 3720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 13449260 - 13449051
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  13449260 cgaataatataatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaac 13449162  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
     ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||| |||||| ||||||||||||||||||||    
T  13449161 tatacacctcaaaagtatacatgtcatgagatcgaatacatcatcataaaattctccaaaacataaatgaattcaggatagacaatctataataaatcat 13449062  T
Q  205 aagacaacatc 215  Q
    |||||||||||    
T  13449061 aagacaacatc 13449051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 15 - 209
Target Start/End: Original strand, 5407109 - 5407301
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||||  |||||||||||| || |||| ||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  5407109 aatattcaagtaatagacgccacgtcttcaataaaatccaaaa-caacatgcatgtataaatattctcaacagttgcagcggatataaaccatacacctc 5407207  T
Q  115 aaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcataagac 209  Q
     |||||||||||| |||| |||| ||||||||||||| ||| ||| ||||||||||||| ||||||||| |||||||||  ||||||||||||||    
T  5407208 -aaagtatacatgccatgagatcaaatacatcatcatcaaactctccaaaacataaatacatccaggatagacaatctaagataaatcataagac 5407301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 47470582 - 47470431
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||||| |||||  |||||||| | ||||||||||||||||||| ||||||||||||||    
T  47470582 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcggatataaa 47470484  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||||||||||||||||||||||||  |||  |||||||||||||||||    
T  47470483 ccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaa 47470431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 6 - 127
Target Start/End: Complemental strand, 18241434 - 18241313
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| || |||| |||||||||| ||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||||||||||||||     
T  18241434 gaataatataaatagtcaagaaatagacgctacatcatcaacaaaatcgaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaat 18241336  T
Q  105 catacacctcaaaagtatacatg 127  Q
    |||| |  ||||||| |||||||    
T  18241335 catataattcaaaagcatacatg 18241313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 151
Target Start/End: Complemental strand, 41258615 - 41258480
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtat-aaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||| ||||||||| ||||||||||||| |||||||| ||||| |||||||||||||||| ||||||||||||||||||| || |    
T  41258615 atattcaagaaatagacgctacatcatcatacaaaatccaaaa-caacatgcatgtattaaaaattctcaacagtcgcagcggatataaaccatatactt 41258517  T
Q  114 caaaagtatacatgtcatgggatcgaatacatcatcat 151  Q
    |||||  ||||||| ||||  ||| ||||||| |||||    
T  41258516 caaaa-catacatgccatgatatcaaatacataatcat 41258480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 19557260 - 19557407
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| ||||||||||||  ||||||||||||||   |||||||| || |  || ||||||||||||| |||||||||||||||||    
T  19557260 gaataatataaatattcaagaaatagacgccatgtcatcaacaaaatc--taaacaacaggcatacat-aaaattctcaacaattgcagcggatataaac 19557356  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||||| ||||||||||||  ||| ||||  |||||||||||||||||    
T  19557357 catacacctc-aaagtatacatgctatgagatcaaaatacatcatcataaaa 19557407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 10239688 - 10239528
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||| ||| ||||||||||||||||||||||||  | |||| |  ||| || | ||||||||||||  || |||||||||||||||||    
T  10239688 cgaataatataaatatccaagaaatagacgccacatcatcaacaatgttcaaata--acaagcatatataaaaattctataccgttgcagcggatataaa 10239591  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattcttcaaa 164  Q
    |||||||| ||||||||||||||| |||| | ||  ||||||||| ||| |||||||||||||    
T  10239590 ccatacacttcaaaagtatacatgccatgaggtcaaaatacatcaacataaaaattcttcaaa 10239528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 14569330 - 14569456
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| |||||||||| || || |||||||| ||   ||||||||||| | ||||||| ||||||||||| |||||| |||||    
T  14569330 cacgaataatataaatattcaagaaatagacgctacgtcttcaacaaattc---aaacaacatgcatatataaaatttctcaacagtcgcagcgaatata 14569426  T
Q  102 aaccatacacctcaaaagtatacatgtcat 131  Q
    || |||||| ||| ||| ||||||||||||    
T  14569427 aatcatacatctccaaaatatacatgtcat 14569456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 13596256 - 13596117
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||| ||||| || ||||||||||||||||||  ||||| || | |||||||||| |||||||||||| |||||||| | |||||| |||    
T  13596256 aatattcaagaaatcgacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattttcaacagttgcatcggatatagatcatacatctc 13596159  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     ||||| |||||| |||| ||||  |||||| ||||||||||    
T  13596158 caaagtctacatgccatgagatcaaaatacaacatcataaaa 13596117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 50224339 - 50224253
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| ||||  ||||||||| |||||||    
T  50224339 tatataaattctcaacagttgcagcggatataaacaatacacctcaaaagtatacataccatgagatcaaaatacatcaacataaaa 50224253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 5373351 - 5373203
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| ||| |||||| || || ||||||||| ||||| | | ||||| | |||||||||||||||| || |||||||||||||| |||||  |||     
T  5373351 atattcaaaaaacagacgctacgtcttcaacaaaa-ccaaacata-catgcatatataaaaattctcaacggtcgcagcggatataaatcatacttctcc 5373254  T
Q  116 aaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    ||| ||||||||||||| ||||  |||||||||||||| ||||||| ||||    
T  5373253 aaaatatacatgtcatgagatcaaaatacatcatcatataaattctccaaa 5373203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 41919495 - 41919349
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||| || || ||||||||||||||||||  ||||| || | ||||||| ||||||| |||||||| ||||||| |    
T  41919495 cgaataatataaatattcaagaaatagatgctacgtcatcaacaaaatccaaa--caacaggcatatataaaa-ttctcaaaagttgcagtggatataga 41919399  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 152  Q
     |||||| ||| ||| |||| |||||||  |||| | |||||||||||||    
T  41919398 tcatacatctccaaaatatagatgtcataagatcaatatacatcatcata 41919349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 12729333 - 12729428
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatat 100  Q
    |||||||||||| |||| || |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||||||| |||||||||||    
T  12729333 cgaataatataaatatttaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaacagtcgcagcggatat 12729428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 54366284 - 54366182
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||||||| | |||||||||| | |||||| |||     
T  54366284 atattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaacagtcgtagcggatatagatcatacatctct 54366186  T
Q  116 aaag 119  Q
    ||||    
T  54366185 aaag 54366182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 12136481 - 12136383
Alignment:
Q  55 aaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
    |||||||||||| | ||||||| | ||||||||| |||  | ||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||    
T  12136481 aaaacaacatgcatatataaaagtcctcaacagtcgcaatgtatataaatcatacatctccaaagtatacatgtcatgagatcaaaatacatcatcata 12136383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 12246471 - 12246382
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||||| || ||||||  |||||||||| |||||||||||||||||    
T  12246471 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaa--tctcaacagtcgcagcggatataaacca 12246382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 18274749 - 18274837
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||| ||||||| || || ||||||| ||||||||||||  ||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  18274749 atattcaagaaatagatgctacgtcatcaaacaaaatccaaaat-aacatgcatgtataaaaat-ctcaacagtcgcagtggatataaacc 18274837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 41168150 - 41168061
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| |||||||||| || |||||| | ||||||||||  |||||||| |||||||||| ||| |||||| |||| ||||||||||||    
T  41168150 tattcaagaaatagacgctacgtcatcatagaaaatccaaattcaacatgcatgtataaaaa-tcttaacagtcgcagtggatataaacca 41168061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 7188163 - 7188063
Alignment:
Q  17 tattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    ||||||| |||||||||  || ||||| |||||||||||||| |||||||| || ||||||| ||||| ||||  ||||||||||||| |||| || |||    
T  7188163 tattcaagaaatagacgttacgtcatcgaacaaaatccaaaatcaacatgcatgcataaaaa-tctcatcagtcacagcggatataaagcatatacttca 7188065  T
Q  116 aa 117  Q
    ||    
T  7188064 aa 7188063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 56 - 152
Target Start/End: Complemental strand, 19624229 - 19624132
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    ||||||||||| | ||||||| |  |||||||| |||| ||||||||| |||||| ||| ||| ||||||||||||  |||| | |||||||||||||    
T  19624229 aaacaacatgcatatataaaattcatcaacagtcgcagtggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcata 19624132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 42706723 - 42706826
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||| || ||||| |  |||||||||||| |||||||| || ||| |||| |||| |||| |||||||||||||| |||| || |    
T  42706723 atattcaagaaatagacgctacgtcatcgaaccaaaatccaaaatcaacatgcatgcatagaaat-ctcatcagtcgcagcggatataaatcatatactt 42706821  T
Q  114 caaaa 118  Q
    |||||    
T  42706822 caaaa 42706826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 104
Target Start/End: Complemental strand, 15116536 - 15116449
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||    
T  15116536 tattcaagaaatagatgctacgtcatcagacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaac 15116449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 17194627 - 17194572
Alignment:
Q  73 aaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgt 128  Q
    |||||||||||||||| | |||||||||||| |||||| | | |||||||||||||    
T  17194627 aaaaattctcaacagtcgtagcggatataaatcatacatcactaaagtatacatgt 17194572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 13815079 - 13814990
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||| ||| || || |||||| ||||||| ||||  |||||||| || |||| ||| |||||||||||||||||||||||||||    
T  13815079 tattcaagaaacagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataataat-ctcaacagttgcagcggatataaacca 13814990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 73 - 156
Target Start/End: Complemental strand, 17378371 - 17378286
Alignment:
Q  73 aaaaattc-tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcataaaat 156  Q
    |||||||| |||| ||| |||||||||||||| |||||| ||| ||| ||||||||||||  |||| | |||||||| ||||||||    
T  17378371 aaaaattcatcaatagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcaacataaaat 17378286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 159; Significance: 8e-85; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 159; E-Value: 8e-85
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 35850 - 36058
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  35850 cgaataatataatattcaagaaatagacgccacatcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaac 35948  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    ||||||||||||||||||||||| |||| ||||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||     
T  35949 catacacctcaaaagtatacatgacatgagatcgaata-atcatcataaaattctccaaaacataaataaattcaggatagacaatctataataaatcaa 36047  T
Q  205 aagacaacatc 215  Q
    |||| ||||||    
T  36048 aagataacatc 36058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 19670462 - 19670672
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||    
T  19670462 cgaataatataatattcaagaaatagacgccagatcatcaacaaaatccaaaa-caacatgcatatataaaaattctcaacagttgcagcggatataaac 19670560  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcat-aaaattcttcaaaacataaataaatccaggatggacaatctataataaatca 203  Q
    |||||||||| |||| ||||||| || | |||||||||||||||||| |||||||| ||||||||||||| ||||||||| |||||||||||||||||||    
T  19670561 catacacctccaaagcatacatgccaagagatcgaatacatcatcataaaaattctccaaaacataaatagatccaggatagacaatctataataaatca 19670660  T
Q  204 taagacaacatc 215  Q
    ||||||||||||    
T  19670661 taagacaacatc 19670672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 31469759 - 31469552
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||     
T  31469759 cgaataatataatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacggttgcagcggatataaat 31469661  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    |||||||||| |  ||||| |||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||| ||||||    
T  31469660 catacacctcgac-gtatagatgtcatgagatcaaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatttataat-aatcat 31469563  T
Q  205 aagacaacatc 215  Q
    ||| |||||||    
T  31469562 aaggcaacatc 31469552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 15006876 - 15006727
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | |||||||||||| ||||||||||||||||||||||    
T  15006876 gaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattcttaacagttgcagcggatataaac 15006779  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||| |||||| |||||| |||| ||||  |||||| ||||||||||    
T  15006778 catacaccttaaaagtctacatgccatgagatcaaaatacaacatcataaaa 15006727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 34964858 - 34965008
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||| | ||||||||||| ||||||  ||||| || | | ||||||||||||||| ||||||| ||||||||    
T  34964858 cgaataatataaatattcaaaaaatagacgcctcgtcatcaacaaagtccaaa--caacaggcatatttaaaaattctcaacatttgcagcagatataaa 34964955  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||||| ||||||||||||| |||| ||||  |||||||||||||||||    
T  34964956 ccatacacctaaaaagtatacatgccatgagatcaaaatacatcatcataaaa 34965008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 29603499 - 29603628
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| ||||||||| ||| ||||||| ||||||||||| |||||||| ||||||||||||||||||||| | ||||||||||    
T  29603499 cacgaataatataaatattcaagaaatagacgtcacgtcatcaaaaaaatccaaaa-caacatgcatgtataaaaattctcaacagtcgtagcggatata 29603597  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    |||||||||  | || || ||||||||||||    
T  29603598 aaccatacaatttaagagcatacatgtcatg 29603628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 29163152 - 29163002
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    ||||||||| |||||||||| ||||||||||||||| ||||||  |||||||| | |||||||||||||||||||  ||||||||||| | |||||| ||    
T  29163152 aatattcaagaaatagacgctacatcatcaacaaaaatccaaa--caacatgcatatataaaaattctcaacagtcacagcggatatagatcatacatct 29163055  T
Q  114 caaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    | ||||||||||||||||| ||||  ||||||||||| || ||||||||||||    
T  29163054 ccaaagtatacatgtcatgagatcaaaatacatcatcgtataaattcttcaaa 29163002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 19852224 - 19852331
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| |||| || ||||||||||||  ||||||||||||||||||  |||||||  ||||||||||||||||||| ||||||||||||||    
T  19852224 cacgaataatataaatatttaagaaatagacgccatgtcatcaacaaaatccaaac-caacatgaatgtataaaaattctcaacaattgcagcggatata 19852322  T
Q  102 aaccataca 110  Q
    |||||||||    
T  19852323 aaccataca 19852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 164
Target Start/End: Complemental strand, 22595908 - 22595747
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| || || ||||||||| | |||  |||||||| | ||||||| ||||||||||| ||||| ||||||||    
T  22595908 cgaataatataaatattcaagaaatagacgctacgtcttcaacaaaaactaaat-caacatgcatatataaaatttctcaacagtcgcagcagatataaa 22595810  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
     |||||| ||| ||||||||||||||||| ||||  |||||||||||||| ||||||| ||||    
T  22595809 tcatacatctccaaagtatacatgtcatgtgatcaaaatacatcatcatataaattctccaaa 22595747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 12311239 - 12311139
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| |||||||||| || | ||||||||||||||||  |||||||| ||||||||||||||||||||| ||||||||||||||||||| || |||    
T  12311239 atattcaagaaatagacgctacgttatcaacaaaatccaaag-caacatgcatgtataaaaattctcaacagtcgcagcggatataaaccatatacttca 12311141  T
Q  116 aa 117  Q
    ||    
T  12311140 aa 12311139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 22846049 - 22846174
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||| |||| || ||||||| ||||  | |||||||||||| ||||||||| ||||||| ||| ||||||||||||||    
T  22846049 cgaataatataaatattcaagaaataaacgctacgtcatcaaaaaaaatccaaaacaacatgcatgtataaaa-ttctcaatagtcgcagcggatataaa 22846147  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
    ||||| || ||  ||| ||||||||||||    
T  22846148 ccatatacatc--aagcatacatgtcatg 22846174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 17 - 180
Target Start/End: Original strand, 23218920 - 23219083
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 116  Q
    ||||||| |||||||||| || ||  ||| |||| |||||  |||||||| | || |||||||||||||||| |||||||||||||| |||||  ||| |    
T  23218920 tattcaagaaatagacgctacgtctacaataaaaaccaaat-caacatgcatatagaaaaattctcaacagtcgcagcggatataaatcatacgtctcca 23219018  T
Q  117 aagtatacatgtcatgggatcga-atacatcatcata-aaattcttcaaaacataaataaatccag 180  Q
    || ||||||||||||  |||| | ||||||||||||| ||| ||| || |||||||||||||||||    
T  23219019 aa-tatacatgtcataagatcaatatacatcatcatataaaatctccataacataaataaatccag 23219083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 17858565 - 17858490
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||| |||||| | | || |||||||||||||    
T  17858565 aaacaacatgcatttataaaaattctcaacagtcgcagcggatataaatcatacatcaccaaggtatacatgtcat 17858490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 7830145 - 7830056
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| |||||||||| ||||||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  7830145 tattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgaataaaaat-ctcaacagtcgcagcggatataaacca 7830056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 155
Target Start/End: Complemental strand, 22468305 - 22468205
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaa 154  Q
    |||||||| || | |||||||||||||||||||||||||||||||| | ||| || ||| ||||| |||||| |||| ||||  |||||| |||||||||    
T  22468305 aaacaacaggcatatataaaaattctcaacagttgcagcggatatagatcatgcatctctaaagtctacatggcatgagatcaaaatacaacatcataaa 22468206  T
Q  155 a 155  Q
    |    
T  22468205 a 22468205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 132
Target Start/End: Complemental strand, 16890046 - 16889924
Alignment:
Q  10 aatataatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    |||||| ||||||| |||||||||  || |||||| ||||||| ||||  |||||||| || |||||| | ||||||||| |||||||||||||||||||    
T  16890046 aatatattattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaagt-ctcaacagtcgcagcggatataaaccata 16889948  T
Q  109 cacctcaaaagtatacatgtcatg 132  Q
     |  || |||| ||||||||||||    
T  16889947 taattcgaaagcatacatgtcatg 16889924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 130
Target Start/End: Original strand, 16131234 - 16131307
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtca 130  Q
    ||||||||||| | ||||||||||||||||||| |||| ||||||||| |||||| ||| ||| |||||||||||    
T  16131234 aaacaacatgcatatataaaaattctcaacagtcgcaggggatataaatcatacatctccaaa-tatacatgtca 16131307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 17085784 - 17085670
Alignment:
Q  16 atattcaataaatagacgccacatcatc-aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||  || ||||| ||||||||||||||  ||||||| |||||||||| |||||||||| |||||||||| ||| |||| || ||    
T  17085784 atattcaagaaatagacgttacgtcatccaacaaaatccaaaat-aacatgcatgtataaaaa-tctcaacagtcgcagcggatacaaatcatatacttc 17085687  T
Q  115 aaaagtatacatgtcatg 132  Q
     ||| |||||||||||||    
T  17085686 -aaattatacatgtcatg 17085670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 21927475 - 21927385
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| || |||||| |||||||  |||  | |||||| ||||||||||| ||||||| |||||||||||||||||||    
T  21927475 atattcaagaaatagacgctacgtcatcatacaaaatttaaattcgacatgcatgtataaaaat-ctcaacaattgcagcggatataaacca 21927385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 108
Target Start/End: Complemental strand, 33540444 - 33540377
Alignment:
Q  39 tcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    ||||||||||||||||||| | | |||| ||||||| | |||||||| ||||||||||||||||||||||    
T  33540444 tcatcaacaaaatccaaaa-cgatatgcatgtataaca-ttctcaacggttgcagcggatataaaccata 33540377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 16373924 - 16374039
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| || ||||||  || || |||||||| |||||||  ||||||| | ||||||| | ||||| ||| |||||||||||||| |||||| |||    
T  16373924 aatattcaagaattagacgtgacgtcttcaacaaattccaaaat-aacatgcatatataaaattcctcaaaagtcgcagcggatataaaacatacatctc 16374022  T
Q  115 aaaagtatacatgtcat 131  Q
     ||| |||| |||||||    
T  16374023 caaaatatatatgtcat 16374039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 25369646 - 25369583
Alignment:
Q  44 aacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    |||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  25369646 aacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaaccata 25369583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 25649181 - 25649283
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||   ||||||||||| || |||||| ||||| || ||||||| |||||| ||| |||||||||| |||    
T  25649181 cgaataatataaatattcaagaaatagacgtcatgccatcaacaaaaacc-aaaacaccatgcatgcataaaaa-tctcaatagtcgcagcggatacaaa 25649278  T
Q  104 ccata 108  Q
    |||||    
T  25649279 ccata 25649283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 21411631 - 21411542
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||| ||||| |||||||||||||||||    
T  21411631 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctctacagtcgcagcggatataaacca 21411542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 6092467 - 6092558
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcgga-tataaaccata 108  Q
    |||||||| |||||||||| || |||||||||||   | |||||||||||| || || | ||||||||||||| |||||||| |||||||||||    
T  6092467 atattcaagaaatagacgctacgtcatcaacaaaggtc-aaaacaacatgcatgcat-ataattctcaacagtcgcagcggattataaaccata 6092558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 20072 - 20281
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||| ||| |||| |||||||||||||| |||||||| |||||||||||||||||||||||||||  |||||||     
T  20072 cgaataatataatattcaagaaatagacgtcacgtcatgaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcaaatataaat 20170  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||    
T  20171 catacacctcaaaagtatacatgacatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatccataatagatcat 20270  T
Q  205 aagacaacatc 215  Q
    |||||||||||    
T  20271 aagacaacatc 20281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 146; Significance: 4e-77; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 146; E-Value: 4e-77
Query Start/End: Original strand, 6 - 214
Target Start/End: Complemental strand, 141500 - 141292
Alignment:
Q  6 gaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||||||||||||| ||||||| ||||  || |||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  141500 gaataatataatattcaagaaatagatgccaggtcctcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaacc 141402  T
Q  106 a-tacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    | |||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||    
T  141401 aatacacctcaaaagtatacatgtaatgagattgaatacatcatcataaaattctccaaaacataaataaatctaggatagacaatctataataaatcat 141302  T
Q  205 aagacaacat 214  Q
    ||||||||||    
T  141301 aagacaacat 141292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 139; Significance: 6e-73; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 139; E-Value: 6e-73
Query Start/End: Original strand, 5 - 215
Target Start/End: Original strand, 28388391 - 28388600
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||||||||  || |||| | ||||||||||||||| ||||||||||||||||||     
T  28388391 cgaataatataatattcaagaaatagacgccacgtcctcaacaaaatccaaaat-aatatgcatctataaaaattctcaatagttgcagcggatataaat 28388489  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    |||||||||||| |||||||||| |||| |||||||||||||||||||||||||| ||| ||||||||||||||||||| ||||||||||||||| ||||    
T  28388490 catacacctcaagagtatacatgccatgagatcgaatacatcatcataaaattctccaatacataaataaatccaggatagacaatctataataagtcat 28388589  T
Q  205 aagacaacatc 215  Q
    |||||||||||    
T  28388590 aagacaacatc 28388600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 52 - 211
Target Start/End: Complemental strand, 18921266 - 18921107
Alignment:
Q  52 ccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcat 151  Q
    |||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| |||| ||||||||| |||    
T  18921266 ccaacaacaacatgcatgtataaaaattctcaacagtcgcagcggatataaaccatacacctcaaaattatacatgtcatgagatcaaatacatcaacat 18921167  T
Q  152 aaaattcttcaaaacataaataaatccaggatggacaatctataataaatcataagacaa 211  Q
    ||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  18921166 aaaatcctccaaaacataaataaatccaggatagacaatctataataaatcgtaagacaa 18921107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 17948273 - 17948123
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||||||||||||    
T  17948273 cgaataatataaatattcaagaaatagacgctacatcatcaacaaaatccaaa--caacatgcatatataaaaattctcaacagttgcagcggatataaa 17948176  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     ||||||||||||||||||||||| |||| ||||  |||||||||||||||||    
T  17948175 tcatacacctcaaaagtatacatgacatgagatcaaaatacatcatcataaaa 17948123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 180
Target Start/End: Complemental strand, 21677743 - 21677569
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||||||  ||||||||||||||||| |   || || | ||||| ||||||||||||||||||||||||||||    
T  21677743 cgaataatataaatattcaagaaatagacgccacgccatcaacaaaatccaaatat--caggcatatataagaattctcaacagttgcagcggatataaa 21677646  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcata-aaattcttcaaaacataaataaatccag 180  Q
    ||||||||||| |||||||||||| |||| |||| |||||||||||||| ||||||| |  |||||||||||||||||    
T  21677645 ccatacacctc-aaagtatacatgccatgagatcaaatacatcatcatagaaattctcctcaacataaataaatccag 21677569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 4482192 - 4482321
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| | |||||||||||||||||||||    
T  4482192 cacgaataatataaatattcaaaaaatagacgccacatcatcaacaaaatccaaaa-caacatgcatgtataaaaaatttcaacagttgcagcggatata 4482290  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    ||||||| || | ||||| ||||||| ||||    
T  4482291 aaccatatactttaaaagcatacatgccatg 4482321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 28717982 - 28718097
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||  | ||| ||||||||||||| |||||||| | ||||||||||||||||||| |||| ||||||||||||||||||||    
T  28717982 aatattcaagaaatagacgccatgttatcgacaaaatccaaaa-caacatgcatttataaaaattctcaacagtcgcagtggatataaaccatacacctc 28718080  T
Q  115 aaaagtatacatgtcat 131  Q
     ||||||||||||||||    
T  28718081 caaagtatacatgtcat 28718097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 31499171 - 31499300
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||| ||||||| ||||||||| || ||||||||  ||||||||||||  ||||||| |||||||||||||| |||||| ||||||||||||    
T  31499171 cgaataatataaatattcaagaaatagacgtcatatcatcaattcaaaatccaaaat-aacatgcatgtataaaaattcttaacagtcgcagcggatata 31499269  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    || |||||||||||||||||| |||||||||    
T  31499270 aatcatacacctcaaaagtatgcatgtcatg 31499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 20587867 - 20587746
Alignment:
Q  5 cgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||| ||||||||| ||||||||  ||| || |||||||||||||||| |||||||| ||||||||||||||||||||  ||| || |||||||    
T  20587867 cgaataatatgaatattcaagaaatagacatcacgtcttcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagacgcaacgaatataaa 20587769  T
Q  104 ccatacacctcaaaagtatacat 126  Q
    |||||||||||||||||||||||    
T  20587768 ccatacacctcaaaagtatacat 20587746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 9323305 - 9323155
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||  ||||||||| |||||||||| || |||||||||| | | |||| ||  |  | | |||||||||| ||||||||||||||||||||||||    
T  9323305 cgaataattgaatattcaagaaatagacgctacgtcatcaacaataac-aaaatcatgagacatatataaaaattatcaacagttgcagcggatataaac 9323207  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||||||||||||||||| |||| ||||  ||||||||| |||||||    
T  9323206 catacacctcaaaagtatacatgccatgagatcaaaatacatcaacataaaa 9323155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 55 - 164
Target Start/End: Original strand, 17922962 - 17923073
Alignment:
Q  55 aaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata- 152  Q
    |||||||||||| |||||||||||| |||||||| |||||||||||||| |||||| ||| ||||||||||||||||| ||||  ||||||||||||||     
T  17922962 aaaacaacatgcatgtataaaaattttcaacagtcgcagcggatataaatcatacatctctaaagtatacatgtcatgagatcaaaatacatcatcatat 17923061  T
Q  153 aaattcttcaaa 164  Q
    ||||||| ||||    
T  17923062 aaattctccaaa 17923073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 33555600 - 33555728
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||| ||||||| |||||||| |||| ||||| |  |||||||  ||||||||| || | |||||||| |||||||||| ||||||| ||||    
T  33555600 cgaataatataaatattcaagaaatagacaccacgtcatcgattcaaaatc--aaaacaacaggcatatataaaaactctcaacagtcgcagcgggtata 33555697  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    |||||||||||||||||||||||||| ||||    
T  33555698 aaccatacacctcaaaagtatacatgccatg 33555728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 39294402 - 39294240
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| |||||||||| || ||  ||| ||||  ||||  |||||||| | ||||||||||||||||||| ||||||||||||    
T  39294402 cacgaataatataaatattcaagaaatagacgctacgtctacaataaaaatcaaat-caacatgcatatataaaaattctcaacagtcgcagcggatata 39294304  T
Q  102 aaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaa 163  Q
    || ||||||  || |||||||||||| |||| ||||  |||||||||||||| |||||||||||    
T  39294303 aatcatacatatccaaagtatacatgccatgagatcaaaatacatcatcatataaattcttcaa 39294240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 9609182 - 9609283
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| |||||||||| |||||||||||  |||||||| |||||||| || ||||||||| ||||||||||||||||||| || ||    
T  9609182 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatat-ctcaacagtcgcagcggatataaaccatatacttc 9609280  T
Q  115 aaa 117  Q
    |||    
T  9609281 aaa 9609283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 9640989 - 9641128
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||| ||||| || ||||||||||||||||||  ||||| || | |||||||||| |||||||||||| |||||||| | |||||| |||    
T  9640989 aatattcaagaaatcgacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattttcaacagttgcatcggatatagatcatacatctc 9641086  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     ||||| |||||| |||| ||||  |||||| ||||||||||    
T  9641087 caaagtctacatgccatgagatcaaaatacaacatcataaaa 9641128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 9836754 - 9836855
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| |||||||||| |||||||||||  |||||||| |||||||| || ||||||||| ||||||||||||||||||| || ||    
T  9836754 atattcaagaaatagacgcgacatcatcaaacaaaatccaaattcaacatgcatgtataaatat-ctcaacagtcgcagcggatataaaccatatacttc 9836852  T
Q  115 aaa 117  Q
    |||    
T  9836853 aaa 9836855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 48345526 - 48345640
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| ||  |||||| |||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| || ||    
T  48345526 atattcaagaaatagacgctacgccatcaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaaccatatacttc 48345623  T
Q  115 aaaagtatacatgtcatg 132  Q
     |||| ||||||||||||    
T  48345624 -aaagcatacatgtcatg 48345640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 14938634 - 14938761
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| |||| || ||||||  | ||| ||||||||||||| ||||| |||||||| ||||||||||||| ||||||| |||||| ||| | |    
T  14938634 cgaataatataaatatttaagaaatagtagtcacgtcatcaacaaaattcaaaa-caacatgcatgtataaaaattcccaacagtcgcagcgaataaaga 14938732  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     |||||| |||||||||||||||| ||||    
T  14938733 tcatacatctcaaaagtatacatgccatg 14938761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 15366227 - 15366354
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| |||| || ||||||  | ||| ||||||||||||| ||||| |||||||| ||||||||||||| ||||||| |||||| ||| | |    
T  15366227 cgaataatataaatatttaagaaatagtagtcacgtcatcaacaaaattcaaaa-caacatgcatgtataaaaattcccaacagtcgcagcgaataaaga 15366325  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     |||||| |||||||||||||||| ||||    
T  15366326 tcatacatctcaaaagtatacatgccatg 15366354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 12245631 - 12245765
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||||||||||||  || || |||||||| |||   ||||||||||| | ||||||| ||||||||||| |||||||||||||| |||||| |||     
T  12245631 tattcaataaatagacgttacgtcttcaacaaatatc---aaacaacatgcatatataaaatttctcaacagtcgcagcggatataaatcatacatctcc 12245727  T
Q  116 aaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    ||| ||||||||||||  |||| | |||||||||||||    
T  12245728 aaaatatacatgtcataagatcaatatacatcatcata 12245765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 118
Target Start/End: Complemental strand, 9058867 - 9058754
Alignment:
Q  5 cgaataatata-atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    ||||||||||| ||||| || |||||||||| || || ||| ||||||||||||| |||||||| ||||||||| ||||||||||| ||| |||||||||    
T  9058867 cgaataatatatatatttaagaaatagacgctacgtcttcatacaaaatccaaaa-caacatgcatgtataaaa-ttctcaacagtcgcatcggatataa 9058770  T
Q  103 accatacacctcaaaa 118  Q
    |||||| || ||||||    
T  9058769 accatatacttcaaaa 9058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 14279138 - 14279038
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || |||| || |||||||||||| |||||||| |||| |||||| ||||||||| ||||||||||||||||||| || ||    
T  14279138 atattcaagaaatagacgctacgtcattaaacaaaatccaaaa-caacatgcatgtacaaaaat-ctcaacagtcgcagcggatataaaccatatacttc 14279041  T
Q  115 aaa 117  Q
    |||    
T  14279040 aaa 14279038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 137
Target Start/End: Original strand, 16381839 - 16381969
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| |||| || ||||||| | ||| | ||||||||||||||||  ||||| || | || |||| || ||||||||||||| |||||||||    
T  16381839 cgaataatataaatatttaagaaatagatgtcacgttatcaacaaaatccaaa--caacaggcatatagaaaatttttcaacagttgcagtggatataaa 16381936  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc 137  Q
    |||||||| || |||||||||||| |||| ||||    
T  16381937 ccatacacttc-aaagtatacatgccatgagatc 16381969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 34243375 - 34243274
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||| ||| |||||||||| || ||||||| |||||||||||  |||||||| ||||||||||| ||||||||| ||||| ||||||||||||| || ||    
T  34243375 atatgcaagaaatagacgctacgtcatcaaacaaaatccaaattcaacatgcatgtataaaaat-ctcaacagtcgcagcagatataaaccatatacttc 34243277  T
Q  115 aaa 117  Q
    |||    
T  34243276 aaa 34243274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 127
Target Start/End: Original strand, 4436822 - 4436936
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaa----aattctcaacagttgcagcggatataaaccataca 110  Q
    ||||||||| |||||||||| || ||| ||||||||| ||||  ||||| || | ||||||    ||||||||||||||||| | |||||||||||||||    
T  4436822 aatattcaagaaatagacgctacgtcaacaacaaaattcaaa--caacaagcatatataaataataattctcaacagttgcaacagatataaaccataca 4436919  T
Q  111 cctcaaaagtatacatg 127  Q
    ||||| || ||||||||    
T  4436920 cctcacaaatatacatg 4436936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 4444212 - 4444337
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaa----aattctcaacagttgcagcggata 99  Q
    |||||||||||| ||||||| |||||||||| || ||| ||||||||| ||||  || || || | ||||||    ||||||||||||||||||| ||||    
T  4444212 cgaataatataaatattcaagaaatagacgctacgtcaacaacaaaattcaaa--cagcaagcatatataaataataattctcaacagttgcagcagata 4444309  T
Q  100 taaaccatacacctcaaaagtatacatg 127  Q
    ||||| |||||||||| || ||||||||    
T  4444310 taaacgatacacctcacaaatatacatg 4444337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 5617394 - 5617484
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| |||||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||| |||||||||||||    
T  5617394 atattcaagaaatagacgctacatcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcaacggatataaacca 5617484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 10863154 - 10863065
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| |||||||||| || |||||| ||||||| | ||  |||||||| || |||||||| |||||||||||||||||||||||||||    
T  10863154 tattcaagaaatagacgctacgtcatcatacaaaattccaattcaacatgcatgcataaaaat-ctcaacagttgcagcggatataaacca 10863065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 57 - 131
Target Start/End: Original strand, 13460346 - 13460419
Alignment:
Q  57 aacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    |||||||||| | ||||||||||||||||||| |||||||||||||| |||||| | |  |||||||||||||||    
T  13460346 aacaacatgcatttataaaaattctcaacagtcgcagcggatataaatcatacatcac-caagtatacatgtcat 13460419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 15980705 - 15980636
Alignment:
Q  60 aacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtca 130  Q
    ||||||| | ||||||| ||||||||||| |||||||||||||| |||||| ||||||| |||||||||||    
T  15980705 aacatgcatatataaaatttctcaacagtcgcagcggatataaatcatacatctcaaaa-tatacatgtca 15980636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 16915587 - 16915672
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||| |||||||||| || |||||  ||||||||||||| |||||||| ||||||||||  ||||||||| ||||||||||||    
T  16915587 atattcaagaaatagacgctacgtcatcttacaaaatccaaaa-caacatgcatgtataaaaaaactcaacagtcgcagcggatata 16915672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 18081545 - 18081442
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||| ||| | || ||||||||||||||||||  |||||||  | ||||||| ||||||| |||||||||||||||| |    
T  18081545 cgaataatataaatattcaagaaattgactctacgtcatcaacaaaatccaaa--caacatgtatatataaaa-ttctcaatagttgcagcggatataga 18081449  T
Q  104 ccataca 110  Q
     ||||||    
T  18081448 tcataca 18081442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 3194217 - 3194142
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||| | ||||||||||||||||||| ||| | |||||||| |||| | | | || |||||||||||||    
T  3194217 aaacaacatgcatttataaaaattctcaacagtcgcaccagatataaatcatatatcaccaatgtatacatgtcat 3194142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 16651451 - 16651365
Alignment:
Q  17 tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    ||||||| |||||||| | || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||||||||||||||    
T  16651451 tattcaagaaatagaccctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaa 16651365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Complemental strand, 17625811 - 17625725
Alignment:
Q  17 tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    ||||||| |||||||| | || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| ||||||||||||||    
T  17625811 tattcaagaaatagaccctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaa 17625725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 16930198 - 16930097
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || ||||||| |||||| ||||  || ||||| || |||||| | ||||||||| |||||| |||||||||||| || ||    
T  16930198 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcatcatgcatgcataaaact-ctcaacagtcgcagcgtatataaaccatatacttc 16930100  T
Q  115 aaa 117  Q
    |||    
T  16930099 aaa 16930097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 16935581 - 16935480
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || ||||||| |||||| ||||  || ||||| || |||||| | ||||||||| |||||| |||||||||||| || ||    
T  16935581 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcatcatgcatgcataaaact-ctcaacagtcgcagcgtatataaaccatatacttc 16935483  T
Q  115 aaa 117  Q
    |||    
T  16935482 aaa 16935480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 134; Significance: 6e-70; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 134; E-Value: 6e-70
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 18164137 - 18164340
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||     
T  18164137 cgaataatataatattcaagaaatagacgccgcatcttcaacaaaatgcaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaat 18164235  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    ||||||||||||| ||||||||||||||  ||||||||||||||||||||||||| |||||| |||||| ||||||||| |||||||||  |||||||||    
T  18164236 catacacctcaaa-gtatacatgtcatgatatcgaatacatcatcataaaattctccaaaacgtaaatacatccaggatagacaatctaagataaatcat 18164334  T
Q  205 aagaca 210  Q
    ||||||    
T  18164335 aagaca 18164340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 40555301 - 40555461
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||||| | |||| ||||| || | ||||||||||||||||||||||||||||||||||    
T  40555301 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaac-aaaatcaacaggcatatataaaaattctcaacagttgcagcggatataaa 40555399  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattcttcaaa 164  Q
    ||||||||||||| ||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  40555400 ccatacacctcaatagtatacatgtcatgagatcaaaatacatcatcataaaattcttcaaa 40555461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 46143704 - 46143866
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||| | ||||||||||||||||||||| ||||||||||||||    
T  46143704 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatccatgtataaaaattctcaacagtcgcagcggatataaa 46143802  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattcttcaaaa 165  Q
    | |||||||||||||||||||||||||||  |||  ||||||||||||| |||||||| |||||    
T  46143803 cgatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcatcaaaattctccaaaa 46143866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 41213903 - 41213756
Alignment:
Q  7 aataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||||| ||||||| |||||||||| || |||||||||||| |   || |||||||| | ||||||||||||||||||||||||| ||||||||||    
T  41213903 aataatataaatattcaagaaatagacgctacgtcatcaacaaaacc---aatcaacatgcatatataaaaattctcaacagttgcagcagatataaacc 41213807  T
Q  106 atacacctcaaaagtatacatgtcatggga-tcgaatacatcatcataaaa 155  Q
    ||||||||||||||||||||||| ||| || |  |||||||||||||||||    
T  41213806 atacacctcaaaagtatacatgtaatgagattaaaatacatcatcataaaa 41213756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 5770432 - 5770293
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||| |||||||||| | |||||  |||||||| | |||||||||||||||||||||||||||||||| |||| |||||||    
T  5770432 aatattcaagaaatagacgccacgtcatcaacaagaaccaaa--caacatgcttatataaaaattctcaacagttgcagcggatatagaccagacacctc 5770335  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||| ||| |||| ||||  |||||| ||||||||||    
T  5770334 aaaagtatatatgccatgagatcaaaatacaacatcataaaa 5770293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 5472630 - 5472479
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||| || |||||||  |||||||||||| |||||||| ||||||||||||| ||||||| |||||||||| | | |||||| ||    
T  5472630 atattcaagaaatagacgctacgtcatcaattcaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcgcagcggataaagatcatacatct 5472532  T
Q  114 caaaagtatacatgtcatgggatcg-aatacatcatcata-aaattcttcaaa 164  Q
    |||||||||||||||||||  |||| |||||||||||||| ||||||| ||||    
T  5472531 caaaagtatacatgtcatgatatcgaaatacatcatcatataaattctccaaa 5472479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 33383848 - 33383998
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||  || ||||||| ||||||||||  ||||| || | |||||||||||||||||||||||||||||||| |    
T  33383848 cgaataatataaatattcaagaaatagacgttacgtcatcaagaaaatccaaa--caacaagcatatataaaaattctcaacagttgcagcggatataga 33383945  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     |||||| ||| ||||| ||||||||||| ||||  |||||| ||||||||||    
T  33383946 tcatacatctccaaagtctacatgtcatgagatcaaaatacaacatcataaaa 33383998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 50002193 - 50002066
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||| || ||| ||||||||||||||||||| |||||||| ||||||||||||| ||||||| |||||||||| | |    
T  50002193 cgaataatataaatattcaagaaatagtcgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcgcagcggataaata 50002095  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     |||||| |||||| ||||||||| ||||    
T  50002094 tcatacatctcaaaggtatacatgccatg 50002066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 29217083 - 29217204
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||| |||| || |||||||||||| |||||| |||||||| ||||||||| ||||||||||||||||||||||||||    
T  29217083 cgaataatataaatattcaagaaatatacgctacgtcatcaacaaaaaccaaaa-caacatgcatgtataaaa-ttctcaacagttgcagcggatataaa 29217180  T
Q  104 ccatacacctcaaaagtatacatg 127  Q
    ||||| |  ||||||| |||||||    
T  29217181 ccatataattcaaaagcatacatg 29217204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 21193099 - 21193200
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || |||||| ||||||| ||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||    
T  21193099 atattcaagaaatagacgctacgtcatcatacaaaattcaaaa-caacatgcatgtataaaaattctcaacagtcgcagcggatataaaccatatacttc 21193197  T
Q  115 aaa 117  Q
    |||    
T  21193198 aaa 21193200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 151
Target Start/End: Complemental strand, 78739 - 78592
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    |||||||||||| ||||||| |||||||| | |  |||||||||||| ||||||  |||||||| | | ||||||||||||||||| ||||||||||||     
T  78739 cgaataatataaatattcaagaaatagacactatgtcatcaacaaaaatccaaa--caacatgcatatgtaaaaattctcaacagtggcagcggatatag 78642  T
Q  103 accatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat 151  Q
    | |||||| ||| |||||||||||| |||| ||||  |||||||||||||    
T  78641 atcatacatctccaaagtatacatgccatgagatcaaaatacatcatcat 78592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 21041718 - 21041879
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||| |||||| ||  | ||||||||| | |||  |||||||| | ||||||| ||||||||||| ||||||||||||||    
T  21041718 cgaataatataaatattcaagaaacagacgctacgccttcaacaaaaactaaat-caacatgcatatataaaatttctcaacagtcgcagcggatataaa 21041816  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
     |||||| ||| ||||||||| ||||||| ||||  |||||||||||||| ||||||| ||||    
T  21041817 tcatacatctccaaagtatacttgtcatgtgatcaaaatacatcatcatataaattctccaaa 21041879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 128
Target Start/End: Original strand, 52397597 - 52397708
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||||||||||||||| ||  |||||||||||| ||||  | |||||| ||||||||||||||| |||| |||||| ||||||||||||| |  ||    
T  52397597 aatattcaataaatagacgctacgccatcaacaaaattcaaa--cgacatgcatgtataaaaattctcgacagatgcagcagatataaaccatataattc 52397694  T
Q  115 aaaagtatacatgt 128  Q
    ||||| ||||||||    
T  52397695 aaaagcatacatgt 52397708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 9293636 - 9293520
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||||||||| |  |||||||||||| | |||  |||||||| | ||||||||||||||||||| |||||||||||||| |||| |  ||    
T  9293636 aatattcaagaaatagacgctatgtcatcaacaaaaactaaat-caacatgcatatataaaaattctcaacagtcgcagcggatataaatcatataattc 9293538  T
Q  115 aaaagtatacatgtcatg 132  Q
    |||| |||||||||||||    
T  9293537 aaaaatatacatgtcatg 9293520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 105
Target Start/End: Complemental strand, 20957264 - 20957176
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||| |||||||||||||||||||| |||||||||||||  || |||| ||||||||| |||||||||||||||| |||||||||||    
T  20957264 atattcaagaaatagacgccacatcatcatacaaaatccaaaat-aatatgcatgtataaaa-ttctcaacagttgcagtggatataaacc 20957176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 12891573 - 12891446
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| || ||||||||| ||||||||  |||||  | | |||||||| | |||||| ||||| |||||||| |    
T  12891573 cgaataatataaatattcaagaaatagacgctacgtcatcaacataatccaaa--caacagacatatataaaaaatttcaacaattgcaacggatataga 12891476  T
Q  104 ccatacacctcaaaagtatacatgtcatgg 133  Q
     |||||| ||| ||| ||||||||||||||    
T  12891475 tcatacatctccaaaatatacatgtcatgg 12891446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22837844 - 22837754
Alignment:
Q  17 tattcaataaatagacgccacatcatcaac---aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || ||||||||   ||||||||||| |||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  22837844 tattcaagaaatagatgctacgtcatcaactcaaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaacca 22837754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 37236193 - 37236109
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||| |||||||||| || |||||| |||||||| |||| |||||||| ||||||||||| ||||||||| ||||||||||||    
T  37236193 atattcaagaaatagacgctacgtcatcatacaaaatctaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatata 37236109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 40438563 - 40438459
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||| |||||||||||||||  ||||||||  | | |||||||||| ||| ||||| ||| ||||||| |    
T  40438563 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatcc--aaacaacagacatatataaaaattatcaccagttacagtggatataga 40438466  T
Q  104 ccataca 110  Q
     ||||||    
T  40438465 tcataca 40438459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 20191702 - 20191794
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccataca 110  Q
    ||||||| |||||||||| || ||  ||| |||| |||||  |||||||| | ||||||||||||||||||| |||||| ||||||| ||||||    
T  20191702 tattcaagaaatagacgctacgtctacaataaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcgaatataaatcataca 20191794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 100
Target Start/End: Original strand, 25091013 - 25091095
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatat 100  Q
    ||||||| |||||||||| || || ||||| ||| | |||  |||||||| | ||||||||||||||||||| |||||||||||    
T  25091013 tattcaagaaatagacgctacgtcttcaacgaaaactaaat-caacatgcatatataaaaattctcaacagtcgcagcggatat 25091095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 22148636 - 22148536
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || |||||| | |||||| ||||  ||||||| |||||||||| |||||||||| |||||||||| ||| |||| || ||    
T  22148636 atattcaagaaatagacgctacgtcatcatataaaatctaaaat-aacatgcatgtataaaaa-tctcaacagtcgcagcggatacaaatcataaacttc 22148539  T
Q  115 aaa 117  Q
    |||    
T  22148538 aaa 22148536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 36358541 - 36358450
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| |||||||||   |||||||||||||||||    
T  36358541 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcatagcggatataaaccata 36358450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 116; Significance: 3e-59; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 103912 - 104111
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||||| || |||| ||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||    
T  103912 cgaataatataatattcaagaaatagacgccacgtcttcaataaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatat-aac 104009  T
Q  105 catacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatcat 204  Q
    |||||||||||||| |||||||| |||| |||||||||   |||||||||||||| ||||||||||||| ||||||||| | |||||||  |||||||||    
T  104010 catacacctcaaaa-tatacatgccatgagatcgaata---catcataaaattctccaaaacataaatacatccaggatagtcaatctaagataaatcat 104105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 114; Significance: 5e-58; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 5 - 215
Target Start/End: Complemental strand, 19334257 - 19334047
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    |||||||||||| ||||||| |||||||||  || |||||||||||| ||||||  |||||||| | ||||| ||||||||||||  ||||||||||||     
T  19334257 cgaataatataaatattcaagaaatagacgttacgtcatcaacaaaaatccaaa--caacatgcatatataagaattctcaacagccgcagcggatatag 19334160  T
Q  103 accatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctataataaatc 202  Q
    | |||||| ||| |||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  19334159 atcatacatctccaaagtatatatgtcatgagatcgaatacatcatcataaaattctccaaaacataaataaatccaggatagacaatctataataaatc 19334060  T
Q  203 ataagacaacatc 215  Q
    |||| ||||||||    
T  19334059 ataaaacaacatc 19334047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 20707725 - 20707874
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||||||||||||||||||||||  |||||||| | ||||||||||||||||||||||||| |||| ||||||||||||||    
T  20707725 aatattcaagaaatagacgccacatcatcaacaaaatccaaa--caacatgcatatataaaaattctcaacagttgcagcagatagaaaccatacacctc 20707822  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattcttcaaa 164  Q
    ||||||||||||| |||  ||||  |||||| |||||| |||||||||||||    
T  20707823 aaaagtatacatgacataagatcaaaatacaacatcataaaaattcttcaaa 20707874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 18263651 - 18263525
Alignment:
Q  5 cgaataatataata-ttcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| | ||||| ||||||||| ||| ||||||||||||||||||| |||||| | ||||||||| ||||||||||| ||||||||||||||    
T  18263651 cgaataatataaaaattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatccatgtataaaa-ttctcaacagtcgcagcggatataaa 18263554  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
    |||||||||||||||||||||||||||||    
T  18263553 ccatacacctcaaaagtatacatgtcatg 18263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 96 - 215
Target Start/End: Complemental strand, 21234161 - 21234041
Alignment:
Q  96 gatataaaccatacacctcaaaagtatacatgtcatgggatcgaa-tacatcatcataaaattcttcaaaacataaataaatccaggatggacaatctat 194  Q
    |||||||| ||||||||||||||||||||||||||||  ||| || || |||||||||||||||| ||| ||||||||||||||||||| ||||||||||    
T  21234161 gatataaatcatacacctcaaaagtatacatgtcatgatatcaaaatatatcatcataaaattctccaagacataaataaatccaggatagacaatctat 21234062  T
Q  195 aataaatcataagacaacatc 215  Q
    ||||||| |||||||||||||    
T  21234061 aataaattataagacaacatc 21234041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 154
Target Start/End: Complemental strand, 18043388 - 18043250
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||||||||||||||| ||||||  ||||| || | ||||||||||||||||||||||||  |||||||| ||||||||||    
T  18043388 aatattcaagaaatagacgccacatcatcaacaaattccaaa--caacaggcatatataaaaattctcaacagttgcagaagatataaatcatacacctc 18043291  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaa 154  Q
    ||||||||||||| |||| | ||  ||||||||||||||||    
T  18043290 aaaagtatacatgccatgaggtcaaaatacatcatcataaa 18043250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 33170177 - 33170337
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||| | | |||  || || || | |||||||| |||||| ||||||||| ||||||||    
T  33170177 cgaataatataaatattcaagaaatagacgccacgtcatcaacaataacgaaat-catcaggcatatataaaaaatctcaatagttgcagcagatataaa 33170275  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattcttcaaa 164  Q
     |||||||||||||||||||||||||||| ||||  ||||||||||||||||||||| ||||    
T  33170276 tcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaattctccaaa 33170337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 23216583 - 23216731
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||  || || |||||||| ||||||  |||||||| | ||||||||||||||||||||||||| ||||||||    
T  23216583 cgaataatataaatattcaagaaatagacgttacgtcttcaacaaa-tccaaa--caacatgcatatataaaaattctcaacagttgcagctgatataaa 23216679  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||||| |||||||||||| |||| ||||  |||||||||||||||||    
T  23216680 ccatacacctc-aaagtatacatgccatgagatcaaaatacatcatcataaaa 23216731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 15931261 - 15931363
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || |||||| ||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||| || ||    
T  15931261 atattcaagaaatagacgctacgtcatcatacaaaatcccaaaacaacatgcatgtataaaaattctcaacagtcgcagcggatataaaccatatacttc 15931360  T
Q  115 aaa 117  Q
    |||    
T  15931361 aaa 15931363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 6 - 137
Target Start/End: Complemental strand, 22499551 - 22499421
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | |||||||||||||||||||||||||||||||| |     
T  22499551 gaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgcagcggatatagat 22499454  T
Q  105 catacacctcaaaagtatacatgtcatgggatc 137  Q
    |||||| ||| ||||| |||||| |||| ||||    
T  22499453 catacatctccaaagtctacatgccatgagatc 22499421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 24265921 - 24266019
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||| | |||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  24265921 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaattc-aaaacaacatgcatgtat-aaaattctcaacagttgcagcggatataaa 24266018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 29295817 - 29295954
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| ||||||||| ||| |||||||  |||||||||||| |||||||| |||||||||  |||||||||| ||||||||||||||||||| || |    
T  29295817 atattcaagaaatagacgtcacgtcatcaaaccaaaatccaaaa-caacatgcatgtataaaa--tctcaacagtcgcagcggatataaaccatatactt 29295913  T
Q  114 caaaagtatacatgtcatgggatcgaatacatcatcataaaa 155  Q
    | |||||||||||||||||  ||| ||||||| |||||||||    
T  29295914 c-aaagtatacatgtcatgatatcaaatacataatcataaaa 29295954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 6 - 132
Target Start/End: Original strand, 7468228 - 7468351
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||  |||||  | |  ||||||||||||||||||||||||||||||||||    
T  7468228 gaataatataaatattcaagaaatatacgccacgtcatcaacaaaatccaaa--caacagacat--ataaaaattctcaacagttgcagcggatataaac 7468323  T
Q  105 catacacctcaaaagtatacatgtcatg 132  Q
    || |||| ||||||| ||||||| ||||    
T  7468324 cacacacttcaaaagaatacatgccatg 7468351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 24554823 - 24554675
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaa-tccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||||| ||||||  ||||  |  | |||||||||| |||||||| |||||||||||||    
T  24554823 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaaatccaaa--caacgggtatatataaaaattatcaacagtcgcagcggatataa 24554726  T
Q  103 accatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
    | |||||| ||| |||||||||||| |||| ||||  ||||||||||||||    
T  24554725 atcatacatctccaaagtatacatgccatgagatcaaaatacatcatcata 24554675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 22317441 - 22317554
Alignment:
Q  18 attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaa 117  Q
    |||||| |||||||||  || || |||| |||| |||||  |||||||||| ||||||||||||||||||| |||||||||||||| |||| ||||||||    
T  22317441 attcaagaaatagacgttacgtcttcaataaaaaccaaat-caacatgcgtatataaaaattctcaacagtggcagcggatataaatcatatacctcaaa 22317539  T
Q  118 agtatacatgtcatg 132  Q
    |||||||||| ||||    
T  22317540 agtatacatgccatg 22317554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 45561945 - 45561793
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacc 112  Q
    ||||||||| |||||||||| ||||||||||  ||||| |||||  |||||||||| ||| |||||| |||||||| ||| |||||||||| ||||||||    
T  45561945 aatattcaagaaatagacgctacatcatcaattcaaaaaccaaat-caacatgcgtatattaaaattatcaacagtcgcatcggatataaatcatacacc 45561847  T
Q  113 tcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    |||| |||||||||| || | ||||  |||||||||||||| ||||||| ||||    
T  45561846 tcaagagtatacatgccaagagatcaaaatacatcatcatataaattctccaaa 45561793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 131
Target Start/End: Original strand, 24236958 - 24237083
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| |||||||||| || || ||||||||| || ||| |||||||| | ||||||||||||||||| | | || |||||||||     
T  24236958 cgaataatataatattcaagaaatagacgctacgtcttcaacaaaaacc-aaatcaacatgcatatataaaaattctcaacattcgtagtggatataaat 24237056  T
Q  105 catacacctcaaaagtatacatgtcat 131  Q
     ||||| ||| ||| ||||||||||||    
T  24237057 gatacatctccaaaatatacatgtcat 24237083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 94
Target Start/End: Complemental strand, 27233441 - 27233352
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 94  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||| |||||||||||| |  |||||||||||||||||| |||||    
T  27233441 cgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatcc-aaaacaacatgcatacataaaaattctcaacagtcgcagc 27233352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 23119077 - 23118938
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||| |||||| |  | |||||||||| |||||  ||| |||| | ||||||||||||||||||| |||||||||||||| ||||||||||    
T  23119077 aatattcaagaaacagacgctatgtgatcaacaaaaaccaaat-caatatgcatatataaaaattctcaacagtcgcagcggatataaatcatacacctc 23118979  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     |||||||||||| |||| ||||  |||||| ||||||||||    
T  23118978 -aaagtatacatgccatgagatcaaaatacaacatcataaaa 23118938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 21234275 - 21234192
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagt 88  Q
    |||||||||||| ||||||| |||||||||||||||||||||||||| || |||| ||||||| ||||||||| |||||||||||    
T  21234275 cgaataatataaatattcaagaaatagacgccacatcatcaacaaaaacc-aaaataacatgcatgtataaaagttctcaacagt 21234192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 15 - 155
Target Start/End: Complemental strand, 22725671 - 22725532
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaa-atccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    ||||||||| |||||||||| ||||| |||||||| |||   ||||||||||| | ||||||| | ||||||||| |||||||||||||| |||||| ||    
T  22725671 aatattcaagaaatagacgctacatcttcaacaaatatc---aaacaacatgcatatataaaattcctcaacagtcgcagcggatataaatcatacatct 22725575  T
Q  114 caaaagtatacatgtcatgggatcga-atacatcatcataaaa 155  Q
    | |||  |||||||||||  |||| | ||||||||||||||||    
T  22725574 ccaaaagatacatgtcataagatcaatatacatcatcataaaa 22725532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 37655881 - 37655779
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||| || |||||||  ||||| |||||| |||||||| | ||||||||||||||||||| ||||||||||||||||||| || |    
T  37655881 atattcaaaaaatagacgctacgtcatcaatacaaaaaccaaaa-caacatgcatatataaaaattctcaacagtcgcagcggatataaaccatatactt 37655783  T
Q  114 caaa 117  Q
    ||||    
T  37655782 caaa 37655779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 26009369 - 26009471
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||| | || ||||||| |||||||||||  |||||||||||||||||||  ||||||||| ||||||||||||||||||| || ||    
T  26009369 atattcaagaaatagacactacgtcatcaaacaaaatccaaattcaacatgcgtgtataaaaaa-ctcaacagtagcagcggatataaaccatatacttc 26009467  T
Q  115 aaaa 118  Q
    ||||    
T  26009468 aaaa 26009471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 17264487 - 17264583
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    ||||||||| ||||||||| |||||||||||||| |||||| ||| |||||||||||| |||| ||||  |||||||||||||| ||||||| ||||    
T  17264487 tataaaaatcctcaacagtcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 17264583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 151
Target Start/End: Original strand, 22311030 - 22311129
Alignment:
Q  53 caaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat 151  Q
    ||||| |||||||| | |||||||||||||||| ||  || | |||||||| |||||||||||||||||| ||||||||| ||||  |||||||||||||    
T  22311030 caaaatcaacatgcatatataaaaattctcaaccgtcccaactgatataaatcatacacctcaaaagtattcatgtcatgagatcaaaatacatcatcat 22311129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 152
Target Start/End: Original strand, 17499783 - 17499931
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||  || || ||||||||| | |||  |||||||  | ||||||| ||||||||||| ||||||||||||||    
T  17499783 cgaataatataaatattcaagaaatagacgttacgtcttcaacaaaaactaaat-caacatgaatatataaaatttctcaacagtcgcagcggatataaa 17499881  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
     |||||| ||| ||| |||||||| ||||  |||  ||||||||||||||    
T  17499882 tcatacatctccaaaatatacatgccatgcaatcaaaatacatcatcata 17499931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 25607876 - 25607972
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
    ||||||||||| | ||||||  ||||||||||| |||||||||||||| |||||| ||| |||||||||||| |||| ||||  ||||||||||||||    
T  25607876 aaacaacatgcatatataaattttctcaacagtcgcagcggatataaatcatacatctc-aaagtatacatgccatgagatcaaaatacatcatcata 25607972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 16000121 - 16000254
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    ||||| || |||||||||| ||||| ||||||||| |    | |||||||| |  |||||| || |||||||| |||||||||||||| |||||| |||     
T  16000121 atatttaagaaatagacgctacatcttcaacaaaaac----atcaacatgcatacataaaatttttcaacagtcgcagcggatataaatcatacatctct 16000216  T
Q  116 aaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    || |||||||||||||| |||| | |||||||||||||    
T  16000217 aatgtatacatgtcatgagatcaatatacatcatcata 16000254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Original strand, 5851438 - 5851531
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaat-tctcaacagttgcagcggatataaaccata 108  Q
    |||||||| |||||||| | || |||||  ||||||||||||| |||||||| ||||||||||  |||||||||| |||||||||||||||||||    
T  5851438 atattcaagaaatagacactacgtcatcttacaaaatccaaaa-caacatgcatgtataaaaaaatctcaacagtcgcagcggatataaaccata 5851531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 11600011 - 11600160
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| |||||||||| || || ||||||||| | |||| |||||||| | |||||||||| |||||||| |||||||||||| |  ||||  |||     
T  11600011 atattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattatcaacagtcgcagcggatatagataatacttctcc 11600109  T
Q  116 aaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    |||||  ||||| |||  ||||  |||||||||||||| ||||||||||||    
T  11600110 aaagtcgacatgccataagatcaaaatacatcatcatataaattcttcaaa 11600160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 152
Target Start/End: Original strand, 22883768 - 22883861
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    |||||||| ||||||||| ||||||||||| ||| |||||||||| |||||| |||  ||||||||||| |||| |||| | |||||||||||||    
T  22883768 caacatgcatgtataaaatttctcaacagtcgcaacggatataaatcatacatctc-caagtatacatgccatgagatcaatatacatcatcata 22883861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 70 - 131
Target Start/End: Original strand, 11541998 - 11542059
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||||||||||| | | |||||||||| |||||| ||| ||||||||||||||||    
T  11541998 tataaaaattctcaacagtcgtaacggatataaatcatacatctccaaagtatacatgtcat 11542059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 17731768 - 17731678
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||  || ||||||| |||||||||| |||||||||||||||||    
T  17731768 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgaatgcataaaaaatctcaacagtcgcagcggatataaacca 17731678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 22738207 - 22738117
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| || |||||| ||||||| |||   |||||||| || ||| |||| ||||||||| |||||||||||||||||    
T  22738207 atattcaagaaatagacgctacgtcatcatacaaaattcaacttcaacatgcatgcatataaat-ctcaacagtcgcagcggatataaacca 22738117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 17283173 - 17283258
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    ||||||||||||||||||| || |||||| ||||||| ||||  || |||||  | ||||||| |||||||||| ||||||||||||    
T  17283173 atattcaataaatagacgctacgtcatcatacaaaattcaaattcatcatgcaagcataaaaa-tctcaacagtcgcagcggatata 17283258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 102
Target Start/End: Original strand, 23350163 - 23350195
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataa 102  Q
    ||||||||||||||||||| |||||||||||||    
T  23350163 tataaaaattctcaacagtagcagcggatataa 23350195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 1e-46; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 5 - 165
Target Start/End: Original strand, 24082041 - 24082202
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  24082041 cgaataatataatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagttgcagcggatataaac 24082139  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattcttcaaaa 165  Q
    |||| |  ||||||||||||||| ||||  |||  ||||||||||||| |||||||| |||||    
T  24082140 catataattcaaaagtatacatgacatgatatcaaaatacatcatcatcaaaattctccaaaa 24082202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 5623665 - 5623514
Alignment:
Q  5 cgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    ||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||    
T  5623665 cgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aacatgtatgtataaaaattctcaacagttgcagcggatataaa 5623567  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     ||||||| |||| |||||||||||||||  |||  |||||||||||||||||    
T  5623566 tcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaa 5623514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 23236654 - 23236506
Alignment:
Q  7 aataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||||| ||||||| ||||||||| ||| ||||||||||||||||||  |||||  | | |||||||||||||||||||||||||||||||||| |    
T  23236654 aataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaa--caacagacatatataaaaattctcaacagttgcagcggatataaatc 23236557  T
Q  106 atacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||||||||||||||||| |||| ||||  |||||| ||||||||||    
T  23236556 atacacctcaaaagtatacatgccatgagatcaaaatacaacatcataaaa 23236506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 3421079 - 3420952
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||| |||||||||||||||||||  || |||| ||||||||||||||||||| | ||||| ||||||||    
T  3421079 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aagatgcatgtataaaaattctcaacaatcgcagcagatataaa 3420981  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     ||||||||||||||||||||||||||||    
T  3420980 tcatacacctcaaaagtatacatgtcatg 3420952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 3 - 132
Target Start/End: Original strand, 29911971 - 29912100
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||||| ||| |||||||| ||||||||||||  ||||||| ||||| |||| |    
T  29911971 cacgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccgaaa-caacatgcatgtataaaaatttccaacagtcgcagcagataaa 29912069  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    || |||||| |||||||||||||||| ||||    
T  29912070 aatcatacatctcaaaagtatacatgccatg 29912100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 7 - 164
Target Start/End: Original strand, 19871842 - 19871999
Alignment:
Q  7 aataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | ||||||||||||||| ||||||||| |||| | | |    
T  19871842 aataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaatagttgcagcagatacagatc 19871939  T
Q  106 atacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattcttcaaa 164  Q
    ||||| ||| ||||| ||||||||||| ||||  |||||| |||||||||||||| ||||    
T  19871940 atacatctccaaagtctacatgtcatgagatcaaaatacaacatcataaaattctccaaa 19871999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 24228175 - 24228075
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| |||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||| ||||||| ||||||||||||||||||| || |||    
T  24228175 atattcaagaaatagacgctatgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattcccaacagtcgcagcggatataaaccatatacttca 24228077  T
Q  116 aa 117  Q
    ||    
T  24228076 aa 24228075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 14345918 - 14345757
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| |||||||||| || || ||||||||||||||   ||| |  | | |||||| ||||||||||||  |||| ||||||    
T  14345918 cacgaataatataaatattcaagaaatagacgctacgtcttcaacaaaatccaac--caatagacatatataaatattctcaacagtcacagcagatata 14345821  T
Q  102 aaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaa 163  Q
    || |||||| ||| ||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  14345820 aatcatacatctccaaagtatacatgtcatgagatcaaaatacatcatcatataaattcttcaa 14345757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 164
Target Start/End: Original strand, 23411967 - 23412073
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcata-aaatt 157  Q
    |||||||| ||||||||||||||||| ||| ||| || ||||||| |||||| ||| |||||||||||| |||| |||| |||||||||||||| |||||    
T  23411967 caacatgcatgtataaaaattctcaatagtcgcaccgaatataaatcatacatctccaaagtatacatgccatgagatcaaatacatcatcatataaatt 23412066  T
Q  158 cttcaaa 164  Q
    || ||||    
T  23412067 ctccaaa 23412073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 125
Target Start/End: Complemental strand, 26562033 - 26561914
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||  ||  || ||||||||| |||||  |||||||| ||||||||| ||||||||||| ||||||||||||||    
T  26562033 cgaataatataaatattcaagaaatagacatcatgtcctcaacaaaaaccaaat-caacatgcatgtataaaa-ttctcaacagtcgcagcggatataaa 26561936  T
Q  104 ccatacacctcaaaagtataca 125  Q
     ||||| |||||||||||||||    
T  26561935 tcatactcctcaaaagtataca 26561914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 11963569 - 11963669
Alignment:
Q  53 caaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcat 151  Q
    ||||| |||||||| | ||||||||||||||| ||| |||||||||||||| |||||| ||||||| |||| |||||||  |||| | ||||||||||||    
T  11963569 caaaatcaacatgcatatataaaaattctcaatagtcgcagcggatataaatcatacatctcaaaaatataaatgtcataagatcaatatacatcatcat 11963668  T
Q  152 a 152  Q
    |    
T  11963669 a 11963669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 20456754 - 20456649
Alignment:
Q  61 acatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattc 158  Q
    |||||| | |||||||||||||||||||  ||||||||||||| |||||| ||| ||| |||||||| |||| ||||  |||||||||||||| ||||||    
T  20456754 acatgcatatataaaaattctcaacagtcacagcggatataaatcatacatctccaaaatatacatgccatgagatcaaaatacatcatcatataaattc 20456655  T
Q  159 ttcaaa 164  Q
    | ||||    
T  20456654 tccaaa 20456649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 15 - 124
Target Start/End: Original strand, 22879834 - 22879941
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||| ||||  ||||||||| |||| ||||||| ||||| |||||||| |||||| |||||||||| | | |||||| |||    
T  22879834 aatattcaagaaatagacgccacgtcattcacaaaatcc-aaaataacatgcatgtat-aaaattcttaacagtcgcagcggataaagatcatacatctc 22879931  T
Q  115 aaaagtatac 124  Q
    ||| ||||||    
T  22879932 aaacgtatac 22879941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 127
Target Start/End: Complemental strand, 16837981 - 16837860
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| |  || |||||||||  |||||  ||||||| | ||||||||||||||| ||| ||||||||||||||    
T  16837981 cgaataatataaatattcaagaaatagacgctaggtcttcaacaaaa--caaaattaacatgcatatataaaaattctcaatagtcgcagcggatataaa 16837884  T
Q  104 ccatacacctcaaaagtatacatg 127  Q
     | |||| ||| ||||| ||||||    
T  16837883 tcttacatctccaaagtctacatg 16837860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 101
Target Start/End: Original strand, 21614949 - 21615033
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||| |||||||||| || |||||| ||||||||||||| |||||||| |||||||||| |||||||||  ||||||||||||    
T  21614949 atattcaagaaatagacgctacgtcatcatacaaaatccaaaa-caacatgcatgtataaaaa-tctcaacagccgcagcggatata 21615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 127
Target Start/End: Complemental strand, 11765945 - 11765837
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 116  Q
    ||||||| |||||||||  || || |||||||||  ||  |||||||||| | ||||||| ||||||| ||| |||||||||||||| |||||| ||| |    
T  11765945 tattcaagaaatagacgttacgtcttcaacaaaa--caccaacaacatgcatatataaaatttctcaatagtcgcagcggatataaatcatacatctcca 11765848  T
Q  117 aagtatacatg 127  Q
    || ||||||||    
T  11765847 aaatatacatg 11765837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 21228613 - 21228523
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||  || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  21228613 atattcaagaaatagacgttacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaacca 21228523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 28887817 - 28887919
Alignment:
Q  5 cgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    ||||||||| |||||||||| |||||||||  || |||||| ||||||||||||  |||||||  || |||||||| ||||||||| | |||||||||||    
T  28887817 cgaataataataatattcaagaaatagacgatacgtcatcatacaaaatccaaattcaacatgaatgcataaaaat-ctcaacagtcgtagcggatataa 28887915  T
Q  103 acca 106  Q
    ||||    
T  28887916 acca 28887919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 128
Target Start/End: Complemental strand, 37483186 - 37483114
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgt 128  Q
    ||||||||||| | ||||||| |  |||||||| |||||||||||||  |||||| ||||||| |||||||||    
T  37483186 aaacaacatgcatatataaaattcatcaacagtcgcagcggatataagtcatacatctcaaaaatatacatgt 37483114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 23452807 - 23452895
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23452807 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23452895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 23460051 - 23460139
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23460051 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23460139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 23464312 - 23464400
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || ||||||||| ||||||| ||||  |||||||| || ||| |||  ||||||||| |||||||||||||||||    
T  23464312 tattcaagaaatagatgctacatcatcatacaaaattcaaattcaacatgcatgcatataaa--ctcaacagtcgcagcggatataaacca 23464400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 37985817 - 37985892
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||| | ||||||  ||||||||||| ||| | |||||||| |||||| ||| ||| ||||||||||||    
T  37985817 aaacaacatgcatatataaattttctcaacagtcgcatcagatataaatcatacatctccaaaatatacatgtcat 37985892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 105
Target Start/End: Original strand, 430736 - 430824
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || ||| |||| ||||||||| ||||||||||||||||    
T  430736 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcatataaat-ctcaacagtcgcagcggatataaacc 430824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 89; Significance: 4e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 5 - 132
Target Start/End: Original strand, 99073 - 99200
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||||||||||| |||||||||||  ||||||| ||||||||||||||||||||||||||||||||||||    
T  99073 cgaataatataaatattcaagaaatagacgccacatcatcaaaaaaatccaaaat-aacatgcatgtataaaaattctcaacagttgcagcggatataaa 99171  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     ||||||||||||||||||||||| ||||    
T  99172 tcatacacctcaaaagtatacatgccatg 99200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 43429785 - 43429635
Alignment:
Q  5 cgaataatataatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||||||||||| |||||||||||||  ||||||||||| | |||| ||||| || | |||||||||| ||||||||||||||||||||||||    
T  43429785 cgaataatataatattcaagaaatagacgccacgacatcaacaaaaac-aaaatcaacaggcatatataaaaattttcaacagttgcagcggatataaac 43429687  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||||||||||||||||| |||| ||||  |||||||||||||||||    
T  43429686 catacacctcaaaagtatacatgccatgagatcaaaatacatcatcataaaa 43429635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 5 - 199
Target Start/End: Complemental strand, 31416463 - 31416270
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||||||||||  ||||| || | |||||||||||||||||||||||||| |||||||    
T  31416463 cgaataatataaatattcaagaaatagacgccacgtcatcaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgcagcgaatataaa 31416366  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatcgaatacatcatca-taaaattcttcaaaacataaataaatccaggatggacaatctataataa 199  Q
    ||||||||||| |||||||| ||| |||| |||| | |||||| |||  |||||||| || |||||||||||||| || ||  |||||||| |||||    
T  31416365 ccatacacctc-aaagtatatatgccatgagatcaattacatcgtcacgaaaattctccacaacataaataaatctagaataaacaatctagaataa 31416270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 21168952 - 21168801
Alignment:
Q  5 cgaataatataat-attcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    ||||||||||||| |||||| ||||||||| ||| |||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||||    
T  21168952 cgaataatataattattcaagaaatagacgtcacgtcatcaacaaaatccaaaat-aacatgtatgtataaaaattctcaacagttgcagcggatataaa 21168854  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     ||||||| |||| |||||||||||||||  |||  |||||||||||||||||    
T  21168853 tcatacacatcaatagtatacatgtcatgatatcacaatacatcatcataaaa 21168801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 6817866 - 6817720
Alignment:
Q  19 ttcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaa 118  Q
    ||||| |||||||||| ||||||||||||||| |||||  |||||||| | ||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  6817866 ttcaagaaatagacgctacatcatcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcggatataaatcatacacctcaaaa 6817768  T
Q  119 gtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    ||||||||| |||| ||||  |||||||||||||| ||||||| ||||    
T  6817767 gtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 6817720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 22637258 - 22637406
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| |||| || ||||||||||||| ||||||||||||||||||  ||||| || | ||||||  ||||||||||||||||||||||||||    
T  22637258 cgaataatataaatattgaagaaatagacgccacgtcatcaacaaaatccaaa--caacaggcatatataaat-ttctcaacagttgcagcggatataaa 22637354  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    ||||||||||| ||||||||||||||||| ||||  |||||||||||||||||    
T  22637355 ccatacacctc-aaagtatacatgtcatgagatcaaaatacatcatcataaaa 22637406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 15 - 132
Target Start/End: Complemental strand, 4147931 - 4147813
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaa--ttctcaacagttgcagcggatataaaccatacacc 112  Q
    ||||||||| ||||||||||||| ||||||||||||||||||| |||||||| ||||||||||  ||||||||| ||||||||||||||||||||| |      
T  4147931 aatattcaagaaatagacgccacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaaaattctcaacaattgcagcggatataaaccataaaat 4147833  T
Q  113 tcaaaagtatacatgtcatg 132  Q
    ||||||||||||||||||||    
T  4147832 tcaaaagtatacatgtcatg 4147813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 4164492 - 4164365
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||| ||||||||||||||||||| |||||||| |||||||||||||||||||  | |||||||||||||    
T  4164492 cgaataatataaatattcaagaaatagacgtcacgtcatcaacaaaatccaaaa-caacatgcatgtataaaaattctcaacaactacagcggatataaa 4164394  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
    ||||| |  ||||||||||||||| ||||    
T  4164393 ccataaaattcaaaagtatacatgccatg 4164365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 41659542 - 41659692
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| ||||||||  ||| |||||||||||||||||||  | ||||| ||||  ||||||||||||| |||||||||||||||||    
T  41659542 gaataatataaatattcaagaaatagacatcacgtcatcaacaaaatccaaaat-agcatgcatgtaataaaattctcaacaattgcagcggatataaac 41659640  T
Q  105 catacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||| ||||||||||||||||| |||||  |||  |||||||||||||||||    
T  41659641 cataaacctcaaaagtatacatttcatgatatcaaaatacatcatcataaaa 41659692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 12950495 - 12950657
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||| ||||||| |||||||||| || |||||||  ||||| | |||| |||||||| ||||||||||||||||||||| ||||||||||||    
T  12950495 cgaataatataaatattcaagaaatagacgctacgtcatcaattcaaaaac-aaaatcaacatgcatgtataaaaattctcaacagtcgcagcggatata 12950593  T
Q  102 aaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    || ||||| ||||||||||||||||| |||| ||||  |||||||||||||| ||||||| ||||    
T  12950594 aatcatac-cctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 12950657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 6230895 - 6230744
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||| | | |||||||| |||||||||| |||||||| ||||||||||| ||||||||| |||||| |||||||||||||||| |    
T  6230895 aatattcaagaaatagacgtcgcgtcatcaaccaaatccaaaa-caacatgcatgtataaaaatcctcaacagtcgcagcgaatataaaccatacaccgc 6230797  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcat-aaaattcttcaaaa 165  Q
    | |||||||||||| |||  |||  ||||||||||||| |||||||| |||||    
T  6230796 agaagtatacatgtaatgatatcaaaatacatcatcatcaaaattctccaaaa 6230744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 15 - 132
Target Start/End: Original strand, 18968014 - 18968129
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||| ||| ||||||||||||| ||||| ||||| || ||||||||||||| ||||||| |||||||||||||| |||||||||     
T  18968014 aatattcaagaaatagacgtcacgtcatcaacaaaattcaaaa-caacacgcatgtataaaaattc-caacagtcgcagcggatataaagcatacaccta 18968111  T
Q  115 aaaagtatacatgtcatg 132  Q
    |||| |||||||||||||    
T  18968112 aaaaatatacatgtcatg 18968129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 70 - 164
Target Start/End: Original strand, 10902470 - 10902566
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||| ||||  |||||||||||||| ||||||| ||||    
T  10902470 tataaaaattctcaacagttgcagcggatataaattatacacctcaaaagtatacatgccatgagatcaaaatacatcatcatataaattctccaaa 10902566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 6 - 117
Target Start/End: Complemental strand, 33371610 - 33371499
Alignment:
Q  6 gaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    ||||||||||| ||||||| |||||||| | || | || |||||||||||||| |||||||| ||||||||||||||||||||| |||||||||||||||    
T  33371610 gaataatataaatattcaagaaatagacactacgtaattaacaaaatccaaaa-caacatgcatgtataaaaattctcaacagtcgcagcggatataaac 33371512  T
Q  105 catacacctcaaa 117  Q
    |||| || |||||    
T  33371511 catatacttcaaa 33371499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 152
Target Start/End: Complemental strand, 15552146 - 15551996
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    ||||||||||| || ||||||| |||||||||  || || ||||||||| |||||  |||||||| | ||||||||||||||||||| ||||| ||||||    
T  15552146 cacgaataataaaaatattcaagaaatagacgttacgtcttcaacaaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcagatata 15552048  T
Q  102 aaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    || |||||| ||| ||| ||||||||||||| |||| | |||||||||||||    
T  15552047 aatcatacatctccaaaatatacatgtcatgagatcaatatacatcatcata 15551996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 5230848 - 5230712
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| |||||||||| || || ||||||||| | |||| |||||||| | ||||||||||||||| |||||||||| ||||||| |||||| |||     
T  5230848 atattcaagaaatagacgctacgtcttcaacaaaaac-aaaatcaacatgcatatataaaaattctcaatagttgcagcgtatataaatcatacatctcc 5230750  T
Q  116 aaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    |||  |||||||||||  |||| | |||||||||||||    
T  5230749 aaaacatacatgtcataagatcaatatacatcatcata 5230712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 17320824 - 17320699
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||  |||||||||||||||||||||||||||||  |||||||| || | ||||||||||||| |||| ||||||||||||| |    
T  17320824 cgaataatataaatattcaggaaatagacgccacatcatcaacaaaatcc--aaacaacaggcatatataaaaattctc-acagctgcagcggatataga 17320728  T
Q  104 ccatacacctcaaaagtatacatgtcatg 132  Q
     ||| || ||| ||||| |||||| ||||    
T  17320727 tcattcatctctaaagtctacatgccatg 17320699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 155
Target Start/End: Complemental strand, 37919074 - 37918977
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||| | ||||||||||||||||||| |||||||||| ||| |||||| ||| ||| ||||||||||||| ||||  |||||||||||||||||    
T  37919074 caacatgcatatataaaaattctcaacagtcgcagcggatagaaatcatacatctccaaaatatacatgtcatgagatcaaaatacatcatcataaaa 37918977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 7 - 152
Target Start/End: Original strand, 8602233 - 8602379
Alignment:
Q  7 aataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacc 105  Q
    |||||||||| ||||||| |||||||||| || || ||||||||| ||||| | | ||||| | ||||||| ||||||||||| |||||||||||||  |    
T  8602233 aataatataaatattcaagaaatagacgctacgtcttcaacaaaagccaaacata-catgcatatataaaatttctcaacagtcgcagcggatataagtc 8602331  T
Q  106 atacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
    ||||| ||| ||| ||||||||||||  ||||  ||||||||||||||    
T  8602332 atacatctccaaaatatacatgtcataagatcaaaatacatcatcata 8602379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 107
Target Start/End: Complemental strand, 14820072 - 14819971
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||| |  || ||||||||||| |||| || |||||||| ||||||||| ||||||||||||||||||||||||||    
T  14820072 cgaataatataaatattcaagaaatagaagttacgtcatcaacaaagtccagaa-caacatgcatgtataaaa-ttctcaacagttgcagcggatataaa 14819975  T
Q  104 ccat 107  Q
    ||||    
T  14819974 ccat 14819971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 15988468 - 15988579
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 116  Q
    ||||||| |||||||||| || || |||| |||| |||||  |||||||| | ||||||||||||||||||| |||||||||||| | |||||| ||| |    
T  15988468 tattcaagaaatagacgctacgtcttcaataaaaaccaaat-caacatgcatatataaaaattctcaacagtcgcagcggatatatatcatacatctcca 15988566  T
Q  117 aagtatacatgtcat 131  Q
    ||  |||||||||||    
T  15988567 aa--atacatgtcat 15988579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 14182637 - 14182532
Alignment:
Q  5 cgaataatat-aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||| ||||||||| |||||||||| || || |||||||||  ||||  |||||||| | |||||||||| ||||| || ||||||||||||||    
T  14182637 cgaataatatgaatattcaagaaatagacgctacgtcttcaacaaaaatcaaat-caacatgcatatataaaaattttcaacggtcgcagcggatataaa 14182539  T
Q  104 ccataca 110  Q
     ||||||    
T  14182538 tcataca 14182532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 17390930 - 17391056
Alignment:
Q  4 acgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaatt-ctcaacagttgcagcggatata 101  Q
    ||||||||||||| ||||||| |||||||||| || || |||||||| | ||||  |||||||| | ||||||  || ||||||||| ||||||||||||    
T  17390930 acgaataatataaatattcaagaaatagacgctacgtcttcaacaaatttcaaa--caacatgcatatataaattttgctcaacagtcgcagcggatata 17391027  T
Q  102 aaccatacacctcaaaagtatacatgtcat 131  Q
    || |||||| ||| ||| ||||||||||||    
T  17391028 aatcatacatctccaaa-tatacatgtcat 17391056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 70 - 130
Target Start/End: Complemental strand, 40041739 - 40041679
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtca 130  Q
    |||||||||||| |||||| ||| | |||||||| ||||||||||||||||||| ||||||    
T  40041739 tataaaaattcttaacagtcgcatcagatataaatcatacacctcaaaagtatatatgtca 40041679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 34557807 - 34557907
Alignment:
Q  16 atattcaataaatagacgccacatcatcaac-aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||  || |||||||  ||||||||||| |||||||| |||||||||| |||||||||| ||| | ||||||||||||| || ||    
T  34557807 atattcaagaaatagacgatacgtcatcaaataaaatccaaaa-caacatgcatgtataaaaa-tctcaacagtcgcaacagatataaaccatatacttc 34557904  T
Q  115 aaa 117  Q
    |||    
T  34557905 aaa 34557907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 102
Target Start/End: Complemental strand, 55513933 - 55513848
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    |||||||| |||||||||| ||||| ||||||||  ||||| | | ||||| | ||||||| ||||||||||| |||||||||||||    
T  55513933 atattcaagaaatagacgctacatcttcaacaaaggccaaacata-catgcatatataaaatttctcaacagtcgcagcggatataa 55513848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Complemental strand, 14061490 - 14061399
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    ||||||| ||||||| || || |||||| ||||||| ||||   ||||||| || |||||||| ||||||||| |||||||||||||||||||    
T  14061490 tattcaagaaatagatgctacgtcatcatacaaaattcaaatttaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaaccata 14061399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Complemental strand, 25106532 - 25106457
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||| ||| | |||||||| | |||||||| |||||||||||||| |||||| ||| ||| ||||||| ||||    
T  25106532 aaacaacgtgcatatataaaaaatttcaacagtcgcagcggatataaatcatacatctccaaaatatacatatcat 25106457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 103
Target Start/End: Original strand, 25769156 - 25769242
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || ||||||||| |||||||| ||||||||||||||    
T  25769156 tattcaagaaatagatgctacgtcatcatacaaaattcaaactcaacatgcatgcataaaaatt-tcaacagtcgcagcggatataaa 25769242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 17761037 - 17760891
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||| ||||| || || ||||| ||| | ||||  ||||||| | ||||||||||||||||| | |||||||||||| | ||||    ||    
T  17761037 aatattcaagaaatggacgctacgtcttcaacgaaaac-aaaattaacatgcatatataaaaattctcaacattcgcagcggatatagatcata----tc 17760943  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
     ||||||||||||||||  ||||  |||||||||||||| ||||||| ||||    
T  17760942 caaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaa 17760891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 19062357 - 19062211
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||| ||||| || || ||||| ||| | ||||  ||||||| | ||||||||||||||||| | |||||||||||| | ||||    ||    
T  19062357 aatattcaagaaatggacgctacgtcttcaacgaaaac-aaaattaacatgcatatataaaaattctcaacattcgcagcggatatagatcata----tc 19062263  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
     ||||||||||||||||  ||||  |||||||||||||| ||||||| ||||    
T  19062262 caaagtatacatgtcataagatcaaaatacatcatcatataaattctccaaa 19062211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 8687860 - 8687900
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccataca 110  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  8687860 tataaaatttctcaacagtcgcagcggatataaatcataca 8687900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 110
Target Start/End: Original strand, 9039729 - 9039769
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccataca 110  Q
    ||||||| ||||||||||| |||||||||||||| ||||||    
T  9039729 tataaaatttctcaacagtcgcagcggatataaatcataca 9039769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 5 - 175
Target Start/End: Complemental strand, 11247 - 11076
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| |||| ||  ||||||  |||| ||||||||||||||||||  |||||||| ||||||||||||||||||||||||| ||||||||||    
T  11247 cgaataatataaatatttaagtaatagattccacgtcatcaacaaaatccaaac-caacatgcatgtataaaaattctcaacagttgcaacggatataaa 11149  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaattcttcaaaacataaataaa 175  Q
    |||||||||| ||||||||||||||||||  |||  ||||||||||||||||| |  || |||||||||||||    
T  11148 ccatacacctaaaaagtatacatgtcatgatatcaaaatacatcatcataaaaattctccaaacataaataaa 11076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 77; Significance: 6e-36; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 5 - 124
Target Start/End: Complemental strand, 26263 - 26144
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||||| ||||||||||||||||||||||| |||||||| |||||| ||||| |||||||| ||||| ||||||||    
T  26263 cgaataatataaatattcaagaaatagacgtcacatcatcaacaaaatccaaaa-caacatgcatgtatacaaattttcaacagtcgcagcagatataaa 26165  T
Q  104 ccatacacctcaaaagtatac 124  Q
    |||||||||||||||||||||    
T  26164 ccatacacctcaaaagtatac 26144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 81 - 155
Target Start/End: Complemental strand, 26140 - 26065
Alignment:
Q  81 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||  |||  |||||||||||||||||    
T  26140 tcaacagtcgcagcagatataaaccatacacctcaaaagtatacatgtcatgatatcaaaatacatcatcataaaa 26065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 74; Significance: 4e-34; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 3273 - 3145
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataa-aaattctcaacagttgcagcggatataa 102  Q
    |||||||||||| |||| || |||||||||| || ||||||||||||||||||| |||||||| ||||||| ||| |||||||||| |||||||||||||    
T  3273 cgaataatataaatattaaagaaatagacgctacgtcatcaacaaaatccaaaa-caacatgcatgtataagaaactctcaacagtcgcagcggatataa 3175  T
Q  103 accatacacctcaaaagtatacatgtcatg 132  Q
    |||| |||||||||||||||||||||||||    
T  3174 accagacacctcaaaagtatacatgtcatg 3145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 4e-34; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 15 - 155
Target Start/End: Original strand, 24271985 - 24272125
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| ||||||||||||| |||||||| ||||||||||  ||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||    
T  24271985 aatattcaagaaatagacgccacgtcatcaacgaaatccaaaat-aacatgcatgtataaaaattctcaacagtcgcagtggatataaatcatacacctc 24272083  T
Q  115 aaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
     |||||||| ||||||||  |||  |||||||||||||||||    
T  24272084 taaagtatatatgtcatgatatcaaaatacatcatcataaaa 24272125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 30995230 - 30995102
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggata 99  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||  ||||||||||| |  |||  | | ||||||||||||||||||| ||||||||||    
T  30995230 cacgaataatataaatattcaagaaatagacgccacgtcatcaattcaaaatccaaata--acagacatatataaaaattctcaacagtcgcagcggata 30995133  T
Q  100 taaaccatacacctcaaaagtatacatgtca 130  Q
    |||||||||||||||||||||||||||||||    
T  30995132 taaaccatacacctcaaaagtatacatgtca 30995102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 6092379 - 6092501
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| || ||||||||||||||||||  ||||| || | ||||||| |||||||||||||||||||||||| |    
T  6092379 cgaataatataaatattcaagaaatagacgctacgtcatcaacaaaatccaaa--caacaagcatatataaaa-ttctcaacagttgcagcggatataga 6092475  T
Q  104 ccatacacctcaaaagtatacatgtc 129  Q
     |||||| ||| ||||| ||||||||    
T  6092476 tcatacatctccaaagtctacatgtc 6092501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 163
Target Start/End: Original strand, 18533352 - 18533444
Alignment:
Q  73 aaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaa 163  Q
    |||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||| ||||  |||||||||||||| |||||||||||    
T  18533352 aaaaattctcaacagtcgcagcggatataaaacatacatctccaaagtatacatgtcatgagatcaaaatacatcatcatataaattcttcaa 18533444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 43640287 - 43640388
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    ||||||||| |||||||||  || |||||||||||| |||||| |||||||| ||||||||||||  ||||||| ||||||||||||||||||| || ||    
T  43640287 aatattcaagaaatagacgatacgtcatcaacaaaacccaaaa-caacatgcatgtataaaaatttccaacagtcgcagcggatataaaccatatacttc 43640385  T
Q  115 aaa 117  Q
    |||    
T  43640386 aaa 43640388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 19436155 - 19436054
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| ||||||| || ||||||| || |||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||| ||| || ||    
T  19436155 atattcaagaaatagaagctacatcattaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaacaatatacttc 19436058  T
Q  115 aaaa 118  Q
    ||||    
T  19436057 aaaa 19436054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 23823730 - 23823642
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || ||||||||||||| ||||  |||||||| || ||||||| |||||||||| |||||||||||||||||    
T  23823730 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaa-tctcaacagtcgcagcggatataaacca 23823642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 23825674 - 23825586
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || ||||||||||||| ||||  |||||||| || ||||||| |||||||||| |||||||||||||||||    
T  23825674 tattcaagaaatagatgctacgtcatcaacaaaattcaaattcaacatgcatgcataaaaa-tctcaacagtcgcagcggatataaacca 23825586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 24089660 - 24089571
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  24089660 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaacca 24089571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 20270897 - 20270985
Alignment:
Q  42 tcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    |||||||||  ||||| |||||||  | ||||||||||||||| ||| ||||| |||||||| |||||| ||| ||| ||||||||||||    
T  20270897 tcaacaaaaatcaaaatcaacatgaatatataaaaattctcaatagtcgcagcagatataaatcatacatctccaaa-tatacatgtcat 20270985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 152
Target Start/End: Original strand, 19643889 - 19643961
Alignment:
Q  81 tcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata 152  Q
    |||||||| |||||||||||||| |||||| ||| ||| ||||||||||||  |||| | |||||||||||||    
T  19643889 tcaacagtcgcagcggatataaatcatacatctccaaaatatacatgtcataagatcaatatacatcatcata 19643961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 32738405 - 32738496
Alignment:
Q  17 tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    ||||||| |||||||||| || | ||||| |||||| ||||  |||||||| || |||||||| ||||||||| |||||| ||||||||||||    
T  32738405 tattcaagaaatagacgctacgttatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcgaatataaaccata 32738496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Complemental strand, 22138046 - 22137969
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 94  Q
    |||||||| |||||||||| || |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |||||    
T  22138046 atattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcgcagc 22137969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 24839403 - 24839478
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||| | ||||||||||||||||||| ||||| |||||||  ||||   ||| ||| ||||||||||||    
T  24839403 aaacaacatgcatatataaaaattctcaacagtcgcagcagatataattcatatgtctccaaaatatacatgtcat 24839478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 25303524 - 25303614
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| || |||||| ||||||  ||||  |||||||| || |||||||| ||||||| | |||||||||||||||||    
T  25303524 atattcaagaaatagacgctacgtcatcatacaaaactcaaattcaacatgcatgcataaaaat-ctcaacattcgcagcggatataaacca 25303614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 22582234 - 22582145
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    ||||||| ||||||| || || |||||| || |||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  22582234 tattcaagaaatagatgctacgtcatcatacgaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaacca 22582145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 40642566 - 40642477
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||| |  ||||||||  ||||| |||| |||||||||||||||||    
T  40642566 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatacacgtataaaa--tctcatcagtcgcagcggatataaacca 40642477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 65; Significance: 9e-29; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 25478 - 25629
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| ||||||| | ||| ||||||| |||||| |||| |||||||| ||||||||||||||||||||| ||| || |||||||    
T  25478 cgaataatataaatattcaagaaatagatgtcacgtcatcaataaaatctaaaa-caacatgcatgtataaaaattctcaacagtagcaacgaatataaa 25576  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||||||| ||||||| ||||||| |||| | ||  |||||||||||||||||    
T  25577 ccatacacttcaaaagcatacatgccatgaggtcaaaatacatcatcataaaa 25629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 70 - 125
Target Start/End: Original strand, 84414 - 84469
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtataca 125  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||||||| |||||||    
T  84414 tataaaaattctcaaaagttgtagcggatataaatcatacacctcaaatgtataca 84469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0327 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0327
Description:

Target: scaffold0327; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 7132 - 6982
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaa 103  Q
    |||||||||||| ||||||| |||||||||| || |||||||| |||| ||||| |||||||| ||||||||  || |||||||||||||||||||||||    
T  7132 cgaataatataaatattcaagaaatagacgctacttcatcaacgaaatgcaaaa-caacatgcatgtataaattttttcaacagttgcagcggatataaa 7034  T
Q  104 ccatacacctcaaaagtatacatgtcatgggatcgaatacatcatcataaaa 155  Q
    || || | |||||||| |||||||  |||  ||| |||||||||||||||||    
T  7033 ccttataactcaaaagcatacatgctatgatatcaaatacatcatcataaaa 6982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 19265 - 19427
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| |||||||||| |  ||||||||||||||||||  ||||||   | |||||||||| |||||||||||||||||||||    
T  19265 cacgaataatataaatattcaagaaatagacgctatgtcatcaacaaaatccaaa--caacatttatatataaaaattatcaacagttgcagcggatata 19362  T
Q  102 aaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
     | |||||| ||| ||||| ||||||||||| ||||  |||||||||||||| ||||||| ||||    
T  19363 gatcatacatctccaaagtctacatgtcatgagatcaaaatacatcatcatataaattctccaaa 19427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 11375 - 11476
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||||||||||||||  |||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| || |    
T  11375 atattcaagaaatagacgccacatcatcaattcaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaaccatatactt 11472  T
Q  114 caaa 117  Q
    ||||    
T  11473 caaa 11476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 2217 - 2106
Alignment:
Q  6 gaataatataatattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    |||||||| ||||||||| ||||||| || || ||||||| |||||||||||  ||||| || | ||||||||||||||||||||| |||||||||||||    
T  2217 gaataatagaatattcaagaaatagatgctacgtcatcaaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgtagcggatataaac 2120  T
Q  105 catacacctcaaaa 118  Q
    ||||||| ||||||    
T  2119 catacacttcaaaa 2106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 14344 - 14250
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccataca 110  Q
    ||||||||| ||||||||||| | ||||||| |||||||||||  ||||| || | |||||||||||||||||||||||||||||||||||||||||    
T  14344 aatattcaagaaatagacgcctcgtcatcaaacaaaatccaaa--caacaggcatatataaaaattctcaacagttgcagcggatataaaccataca 14250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 7 - 127
Target Start/End: Original strand, 502 - 623
Alignment:
Q  7 aataatataa-tattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaac 104  Q
    |||||||||| |||| || |||||||||| |||||||||| |||||||||||| |||||||| | ||||||  |||||||||||||||||||||||||||    
T  502 aataatataaatattgaagaaatagacgctacatcatcaaacaaaatccaaaa-caacatgcatatataaacgttctcaacagttgcagcggatataaac 600  T
Q  105 catacacctcaaaagtatacatg 127  Q
    |||| |  ||||||| |||||||    
T  601 catataattcaaaagcatacatg 623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 70 - 155
Target Start/End: Complemental strand, 123606 - 123520
Alignment:
Q  70 tataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcataaaa 155  Q
    |||| |||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||| ||||  |||||||||||||||||    
T  123606 tatataaattctcaatagttgcagcagatataaatcatacacctcaaaagtatacatgtcatgagatcaaaatacatcatcataaaa 123520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 29042 - 29143
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || ||||||| |||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||| |||| || ||    
T  29042 atattcaagaaatagacgctacgtcatcaaacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaatcatatacttc 29140  T
Q  115 aaa 117  Q
    |||    
T  29141 aaa 29143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 17 - 132
Target Start/End: Complemental strand, 4976 - 4862
Alignment:
Q  17 tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaa 116  Q
    ||||||| |||||||||| || || ||||||||| |||||| |||||||| | |||||||||||||||| ||||||||||||||| | |||||| ||| |    
T  4976 tattcaagaaatagacgctacgtcttcaacaaaaaccaaaa-caacatgcatatataaaaattctcaacggttgcagcggatatagatcatacatctcca 4878  T
Q  117 aagtatacatgtcatg 132  Q
    |||| |||||| ||||    
T  4877 aagtctacatgccatg 4862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 248046 - 247920
Alignment:
Q  3 cacgaataatataa-tattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatata 101  Q
    |||||||||||||| ||||||| |||||||||| || || |||||||| ||   ||||||||||| | ||||||| ||||||||||| |||||| |||||    
T  248046 cacgaataatataaatattcaagaaatagacgctacgtcttcaacaaattc---aaacaacatgcatatataaaatttctcaacagtcgcagcgaatata 247950  T
Q  102 aaccatacacctcaaaagtatacatgtcat 131  Q
    || |||||| ||| ||| ||||||||||||    
T  247949 aatcatacatctccaaaatatacatgtcat 247920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 99426 - 99326
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || ||||||| |||||||||||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| || ||    
T  99426 atattcaagaaatagacgctacgtcatcaaacaaaatccaaaa-caacatgcatgtataaaaat-ctcaacagtcgcagcggatataaaccatatacttc 99329  T
Q  115 aaa 117  Q
    |||    
T  99328 aaa 99326  T

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Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 164
Target Start/End: Complemental strand, 99137 - 99027
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatcga-atacatcatcata-a 153  Q
    ||||||||||| | ||||||||||||||||||| |||||||||||||  |||||| ||| ||||||||||||||||| |||| | ||||||||| ||| |    
T  99137 aaacaacatgcatatataaaaattctcaacagtcgcagcggatataagtcatacatctccaaagtatacatgtcatgagatcaatatacatcattatata 99038  T
Q  154 aattcttcaaa 164  Q
    |||||| ||||    
T  99037 aattctccaaa 99027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 66481 - 66582
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    ||||| || |||||||||| || ||||||||||||| ||||  |||||| | || ||||||| |||||||||| ||  | ||||||||||||| || |||    
T  66481 atatttaagaaatagacgctacgtcatcaacaaaattcaaattcaacatacatgcataaaaa-tctcaacagtcgccacagatataaaccatatacttca 66579  T
Q  116 aaa 118  Q
    |||    
T  66580 aaa 66582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 16 - 117
Target Start/End: Original strand, 2881 - 2982
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| ||||||| |  || |||||| ||||||||||||| |||||||| ||||||||||||||||||| | |||||||||||||||||| ||| ||    
T  2881 atattcaagaaatagatgatacgtcatcatacaaaatccaaaa-caacatgcatgtataaaaattctcaacaatcgcagcggatataaaccattcacttc 2979  T
Q  115 aaa 117  Q
    |||    
T  2980 aaa 2982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 152
Target Start/End: Complemental strand, 73477 - 73383
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata 152  Q
    |||||||| | ||||||||||||||||| | |||||||||||||| |||||| ||| |||||||||||| |||| ||||  ||||||||||||||    
T  73477 caacatgcatatataaaaattctcaacaatcgcagcggatataaatcatacatctccaaagtatacatgccatgagatcaaaatacatcatcata 73383  T

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Target: scaffold0017 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 10223 - 10371
Alignment:
Q  16 atattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctca 115  Q
    |||||||| ||||||| || || |  ||||||||| | |||| |||||||| | ||||||| ||||||||||| |||||||||||| | |||||| |||     
T  10223 atattcaagaaatagatgctacgtattcaacaaaaac-aaaatcaacatgcatatataaaagttctcaacagtcgcagcggatatagatcatacatctcc 10321  T
Q  116 aaagtatacatgtcatgggatc-gaatacatcatcataaaattcttcaaa 164  Q
    ||||| |||||| |||| ||||  ||||||||||||| ||||||| ||||    
T  10322 aaagtctacatgccatgagatcaaaatacatcatcattaaattctccaaa 10371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 25604 - 25514
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||||| ||||||||| ||||||| ||||  |||||||| || |||||||| ||||||||| |||||||||||||||||    
T  25604 atattcaagaaatagacgctacatcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctcaacagtcgcagcggatataaacca 25514  T

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Target: scaffold0088 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 45828 - 45668
Alignment:
Q  5 cgaataatataa-tattcaataaatagacgccacatcatcaaca-aaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataa 102  Q
    |||||||||||| ||||||| |||||||||| || ||||||||| |||||||||  |||||||| | |||||| |||||||||||| |||| ||||||      
T  45828 cgaataatataaatattcaaaaaatagacgctacgtcatcaacataaatccaaa--caacatgcatatataaatattctcaacagtcgcagaggatatgg 45731  T
Q  103 accatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaa 163  Q
    | |||||| ||  ||||| |||||| |||| ||||  |||| ||||||||| |||||||||||    
T  45730 atcatacatcttcaaagtctacatgccatgagatcaaaataaatcatcatataaattcttcaa 45668  T

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Target: scaffold0006 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 199578 - 199478
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || ||||||| |||||||||||| |||||||| |||||||||| | |||||||| |||||||||||||| |||| || ||    
T  199578 atattcaagaaatagacgctacgtcatcaaacaaaatccaaaa-caacatgcatgtataaaaa-tgtcaacagtcgcagcggatataaaacatatacttc 199481  T
Q  115 aaa 117  Q
    |||    
T  199480 aaa 199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 51250 - 51365
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| || |||||| ||||||| ||||  |||||||| || |||||||| ||| ||||| ||| ||||||||||||||| || ||    
T  51250 atattcaagaaatagacgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaat-ctctacagtcgcaacggatataaaccatatacttc 51348  T
Q  115 aaaagtatacatgtcatg 132  Q
     |||| ||||||||||||    
T  51349 -aaagcatacatgtcatg 51365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 2465 - 2539
Alignment:
Q  56 aaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    ||||||||||| | ||||||| ||||||||||| |||||||||||||  | |||| | | ||||||||||||||||    
T  2465 aaacaacatgcatatataaaa-ttctcaacagtcgcagcggatataagtcctacatcaccaaagtatacatgtcat 2539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 20037 - 19908
Alignment:
Q  28 tagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacat 126  Q
    ||||||| |||||||||| |||||||||||| |||||||| | ||| ||||| | ||||||| | ||||||||||||||||| || || |||| ||||||    
T  20037 tagacgctacatcatcaaacaaaatccaaaatcaacatgcatatattaaaat-cgcaacagtcgtagcggatataaaccatatacttc-aaagcatacat 19940  T
Q  127 gtcatgggatc-gaatacatcatcataaaatt 157  Q
    | ||||  |||  ||||||| |||||||||||    
T  19939 gccatgatatcaaaatacataatcataaaatt 19908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 157
Target Start/End: Complemental strand, 29613 - 29484
Alignment:
Q  28 tagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacat 126  Q
    ||||||| |||||||||| |||||||||||| |||||||| | ||| ||||| | ||||||| | ||||||||||||||||| || || |||| ||||||    
T  29613 tagacgctacatcatcaaacaaaatccaaaatcaacatgcatatattaaaat-cgcaacagtcgtagcggatataaaccatatacttc-aaagcatacat 29516  T
Q  127 gtcatgggatc-gaatacatcatcataaaatt 157  Q
    | ||||  |||  ||||||| |||||||||||    
T  29515 gccatgatatcaaaatacataatcataaaatt 29484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 3 - 117
Target Start/End: Complemental strand, 25863 - 25747
Alignment:
Q  3 cacgaataatata-atattcaataaatagacgccacatcatcaa--caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggata 99  Q
    ||||||||||| | |||||||| |||||||||| || |||||||  ||||| |||||| |||| ||| |||||||||||||||||||||  ||   ||||    
T  25863 cacgaataatacatatattcaagaaatagacgctacgtcatcaatacaaaaaccaaaa-caacgtgcatgtataaaaattctcaacagtcacaattgata 25765  T
Q  100 taaaccatacacctcaaa 117  Q
    ||||||||| || |||||    
T  25764 taaaccatatacttcaaa 25747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 16 - 132
Target Start/End: Original strand, 77671 - 77788
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaat-ccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacct 113  Q
    |||||||| |||||||||| ||||||| | ||||||| |||||| |||||||| ||  ||||||| |||| |||| ||||| ||||||||||||| |  |    
T  77671 atattcaagaaatagacgctacatcattatacaaaattccaaaatcaacatgcatgcttaaaaat-ctcatcagtcgcagcagatataaaccatataatt 77769  T
Q  114 caaaagtatacatgtcatg 132  Q
    |||||  ||||||||||||    
T  77770 caaaaacatacatgtcatg 77788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 137
Target Start/End: Original strand, 11291 - 11411
Alignment:
Q  15 aatattcaataaatagacgccacatcatcaacaaaatccaaaaacaacatgcgtgtataaaaattc-tcaacagttgcagcggatataaaccatacacct 113  Q
    ||||||||| |||||||||| || || ||||||||    || | |||||||| | ||||||||||| |||| ||  |||||||||||||| |||||| ||    
T  11291 aatattcaagaaatagacgctacgtcttcaacaaat---aacatcaacatgcatatataaaaattcctcaatagccgcagcggatataaatcatacatct 11387  T
Q  114 caaaagtatacatgtcatgggatc 137  Q
    | |||||||||||| |||| ||||    
T  11388 ccaaagtatacatgccatgagatc 11411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0601 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 164
Target Start/End: Complemental strand, 3537 - 3461
Alignment:
Q  90 gcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattcttcaaa 164  Q
    |||||||||||| | |||||| ||| ||||||||||||||||| ||||  |||||||||| ||| ||||||||||||    
T  3537 gcagcggatatataacatacatctccaaagtatacatgtcatgagatcaaaatacatcattatataaattcttcaaa 3461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 102031 - 101921
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctc 114  Q
    |||||||| |||||||||| ||||||||| ||||| ||||||| || |||||  | |||||||| ||||| ||| |||| |||||||||||||| |  ||    
T  102031 atattcaagaaatagacgctacatcatcatacaaattccaaaa-catcatgcaagcataaaaat-ctcaatagtcgcagtggatataaaccatataattc 101934  T
Q  115 aaaagtatacatg 127  Q
    ||||| |||||||    
T  101933 aaaagcatacatg 101921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 106857 - 106730
Alignment:
Q  5 cgaataata-taatattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcgga-tata 101  Q
    ||||||||| |||||||||| |||||||||| || |||||| ||||||| | |||  | ||||| | |||||||  |||||||||| |||||||| ||||    
T  106857 cgaataataataatattcaagaaatagacgctacgtcatcatacaaaattccaaacaatcatgcatatataaaa--tctcaacagtcgcagcggattata 106760  T
Q  102 aaccatacacctcaaaagtatacatgtcatg 132  Q
    ||||||| || |||||| |||||||| ||||    
T  106759 aaccatatacttcaaaa-tatacatgccatg 106730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 90
Target Start/End: Original strand, 1139 - 1212
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttg 90  Q
    |||||||| ||||| |||| ||||||||| |||||| |||||| |||||||| ||||| |||||||||||||||||    
T  1139 atattcaagaaataaacgctacatcatcatacaaaaaccaaaa-caacatgcatgtat-aaaattctcaacagttg 1212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0786 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0786
Description:

Target: scaffold0786; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 4685 - 4762
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagc 94  Q
    |||||||| |||||||||| || |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |||||    
T  4685 atattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcgcagc 4762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0390
Description:

Target: scaffold0390; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 3218 - 3299
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat 98  Q
    |||||||| ||||||||||  | |||||| ||||| ||||||| |||||||| |||||||||| |||||||||| |||||||||    
T  3218 atattcaagaaatagacgcttcgtcatcacacaaattccaaaa-caacatgcatgtataaaaa-tctcaacagtcgcagcggat 3299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0390; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 98
Target Start/End: Original strand, 16202 - 16283
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat 98  Q
    |||||||| |||||||||| || |||||| ||||| ||||||| |||||| | |||||||||| |||||||||| |||||||||    
T  16202 atattcaagaaatagacgctacgtcatcacacaaattccaaaa-caacatacatgtataaaaa-tctcaacagtcgcagcggat 16283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 132
Target Start/End: Original strand, 5708 - 5782
Alignment:
Q  58 acaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatg 132  Q
    ||||||| | ||||||||||||| ||||||| |||||||||| | | |||||| |||||| ||||| ||| ||||    
T  5708 acaacatacatgtataaaaattcccaacagtcgcagcggataaatatcatacatctcaaaggtatagatgccatg 5782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 24664 - 24547
Alignment:
Q  16 atattcaataaatagacgccacatcatcaac-aaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggat-ataaaccatacacct 113  Q
    |||||||| |||||||||| || |||||| | |||||   |||||||||||| || ||| ||||| ||| |||| ||||||||| |||||||||| |  |    
T  24664 atattcaagaaatagacgctacgtcatcagccaaaatttcaaaacaacatgcatgcatataaatt-tcatcagtcgcagcggattataaaccatataatt 24566  T
Q  114 caaaagtatacatgtcatg 132  Q
    |||||| ||||||||||||    
T  24565 caaaagcatacatgtcatg 24547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0216 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 61 - 164
Target Start/End: Complemental strand, 23300 - 23195
Alignment:
Q  61 acatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcatgggatc-gaatacatcatcata-aaattc 158  Q
    |||||| | |||||||| | |||||||| |||| ||||||||| |||| | ||| ||| ||||||||||||  ||||  |||||||||||||| ||||||    
T  23300 acatgcatatataaaaaatttcaacagtcgcagtggatataaatcatatatctccaaaatatacatgtcataagatcaaaatacatcatcatataaattc 23201  T
Q  159 ttcaaa 164  Q
    | ||||    
T  23200 tccaaa 23195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 31880 - 31788
Alignment:
Q  16 atattcaataaatagacgccacatcatcaa-caaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    |||||||| || || |||| || ||||||| |||||| | |||||||||||| || |||||||| |||| |||| |||||||||||||| ||||    
T  31880 atattcaagaattaaacgctacgtcatcaaacaaaattcgaaaacaacatgcatgcataaaaat-ctcatcagtcgcagcggatataaatcata 31788  T

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Target: scaffold0013 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 33415 - 33503
Alignment:
Q  16 atattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaacca 106  Q
    |||||||| |||||||| | || |||||| ||||||| ||||  |||||||| |||| |||   |||||||||| |||||||||||||||||    
T  33415 atattcaagaaatagacactacgtcatcatacaaaattcaaattcaacatgcatgtaaaaa---tctcaacagtcgcagcggatataaacca 33503  T

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Target: scaffold0808 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 131
Target Start/End: Original strand, 5326 - 5398
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatgtcat 131  Q
    |||||||| | ||||||| || |||||||| ||||  |||||||| |||||| ||| ||| ||||||||||||    
T  5326 caacatgcatatataaaatttatcaacagtcgcagatgatataaatcatacatctccaaaatatacatgtcat 5398  T

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Target: scaffold0503 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 9347 - 9414
Alignment:
Q  59 caacatgcgtgtataaaaattctcaacagttgcagcggatataaaccatacacctcaaaagtatacatg 127  Q
    |||||||| || |||||||| ||||||||| |||| |||||||||||||| |  ||||||| |||||||    
T  9347 caacatgcatgcataaaaat-ctcaacagtcgcagtggatataaaccatataattcaaaagcatacatg 9414  T

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Target: scaffold0022 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 108
Target Start/End: Original strand, 107529 - 107620
Alignment:
Q  17 tattcaataaatagacgccacatcatca-acaaaatccaaaaacaacatgcgtgtataaaaattctcaacagttgcagcggatataaaccata 108  Q
    ||||||| ||||||| || || |||||| ||||||| ||||  |||||||| || |||||||  ||||||||| |||| ||||||||||||||    
T  107529 tattcaagaaatagatgctacgtcatcatacaaaattcaaattcaacatgcatgcataaaaag-ctcaacagtcgcagtggatataaaccata 107620  T

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