View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5743-Insertion-5 (Length: 182)
Name: NF5743-Insertion-5
Description: NF5743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5743-Insertion-5 |
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Alignment Details
Target: chr3 (Bit Score: 135; Significance: 1e-70; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 135; E-Value: 1e-70
Query Start/End: Original strand, 8 - 169
Target Start/End: Original strand, 40659941 - 40660105
Alignment:
| Q |
8 |
attttcatttccctgtgaaatcgtgactgaatagaatatggcatccttgttattgagaaggtctaagacctta---gttcctaatcaccagcaccttcaa |
104 |
Q |
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| T |
40659941 |
attttcatttccctgtgaaattttgactgaatagaatatggcatccttgttattgagaaggtctaagaccttattagttcctaatcaccagcaccttcaa |
40660040 |
T |
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| Q |
105 |
agtaagctagctagcttgttgctaggatcaggatcaacattcatcaaccaccactcttcttctca |
169 |
Q |
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| T |
40660041 |
agtaagctagctagcttgttactaggatcaggatcaacattcatcaaccgccactcttcttctca |
40660105 |
T |
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