View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5743_high_1 (Length: 773)
Name: NF5743_high_1
Description: NF5743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5743_high_1 |
 | |
|
Alignment Details
Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 10218137 - 10218419
Alignment:
| Q |
1 |
atagctcaataagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
10218137 |
atagctcaataagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtacaatt |
10218236 |
T |
|
| Q |
101 |
-gtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagcaatagtagatcttttagccatcctagagtt |
199 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| |
|
|
| T |
10218237 |
tgtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaacttagcaatagtagatcatttagccatcctagagtt |
10218336 |
T |
|
| Q |
200 |
ggaacttgtccaacaaaatagttttgaccgagatcaaatattgtaatgggagatgatgcatttgttatggaagtggggattgg |
282 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10218337 |
ggaacttgtccaacaaaatagttttgaccgagatcaaatattgtaatgggagatgatgcatttgttatggaagtggggattgg |
10218419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 450 - 751
Target Start/End: Original strand, 11049718 - 11050026
Alignment:
| Q |
450 |
acaagcttttgaggtgacatatttcttgtggaatatctctttct-------aagttgttataagcaaatgaaaaatcggttaagcttgaaagattcccta |
542 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
11049718 |
acaagcttttgaggtgacatatttcttgtggaatatctccttctaagttctaagttgttatacacaaatgaaaaatcggttaagcttgaaagattcccta |
11049817 |
T |
|
| Q |
543 |
tgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaatt |
642 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||| ||||||| || ||| ||||||| |
|
|
| T |
11049818 |
tgaatgaagggattcctccagttaatttatttttccaaatggccaatgattgaagttttttcaaagagccaatttcatttggtatcttgccaattaaatt |
11049917 |
T |
|
| Q |
643 |
gttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaat |
742 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||| |
|
|
| T |
11049918 |
gttccctcccaaatacaagtctttaagattggagcaatgtgtgaggtttgtaggaatttctcctgcaagagagttattgctgagtaaaagttgttccaat |
11050017 |
T |
|
| Q |
743 |
tgtatcaac |
751 |
Q |
| |
|
|||| |||| |
|
|
| T |
11050018 |
tgtagcaac |
11050026 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 179; E-Value: 3e-96
Query Start/End: Original strand, 322 - 752
Target Start/End: Complemental strand, 10610194 - 10609764
Alignment:
| Q |
322 |
aaacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagac |
421 |
Q |
| |
|
|||||||||||||||||| ||||||| ||| ||||||| ||||||| ||| ||| |||||| |||||||||||||| |||||||||||||||||||||| |
|
|
| T |
10610194 |
aaacatgttgggtggaagtgagccattaaatctattcatggttagtgagagttcagtaagtgctgagatattgtaaagacaagaaggaatcataccagac |
10610095 |
T |
|
| Q |
422 |
aaattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcgg |
521 |
Q |
| |
|
|||| ||| |||||| | |||| | ||| ||||||| ||||| |||||||||||||||| | |||||||||||| ||| || ||||||| | |
|
|
| T |
10610094 |
aaatagtttacacccataaataaacctctcaaatttttgagacgacatgtttcttgtggaatatccccttctaagttgtttgaagtaactgaaaaacgcg |
10609995 |
T |
|
| Q |
522 |
ttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaat |
621 |
Q |
| |
|
|||||| |||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||| || ||||||| |||||||| ||| |||||||||| |
|
|
| T |
10609994 |
ttaagcatgaaagattccctacgaatgaaggaattcctccggttaatttgtttttccaaatggtcacatattgaagctttttcaaagagccaatttcaat |
10609895 |
T |
|
| Q |
622 |
tggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattg |
721 |
Q |
| |
|
|||||||| ||| | |||||||| ||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
10609894 |
cggtattttgccaatcaaattgtttcctcccaaacgtaactctttgagattggagcaatgtgtcaggtttgtaggaatttctcctgcaaaagagttattg |
10609795 |
T |
|
| Q |
722 |
ctaagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
| || |||||||||||||||||| ||||| |
|
|
| T |
10609794 |
atgagataaagttgttgcaattgtagcaact |
10609764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 334 - 752
Target Start/End: Original strand, 10742439 - 10742857
Alignment:
| Q |
334 |
tggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgttcaca |
433 |
Q |
| |
|
|||||||||||||| ||||||||||| ||||| |||||| | ||| |||| |||||||||| ||||||||||| |||||||||||||| ||| ||| |
|
|
| T |
10742439 |
tggaagagagccattgaagttattcatgactagtgaaagctcagtcagtaatgacatattgtaaatacaagaaggaaccataccagacaaatagtttaca |
10742538 |
T |
|
| Q |
434 |
ccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaa |
533 |
Q |
| |
|
||| || |||| | ||| |||| || |||||||||||||||||||||| | |||||||||||| ||| || |||||| |||| ||||||| |
|
|
| T |
10742539 |
cccatatataaacctctcaaattttttagacgacatatttcttgtggaatatccccttctaagttgtttgaaggaaccgaaaaaagcattaaacttgaaa |
10742638 |
T |
|
| Q |
534 |
gattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttcc |
633 |
Q |
| |
|
||||||||||| |||||| ||||||||| ||||| || || ||||||| ||||||||||||||||||||| || ||||||||||||||||||| || |
|
|
| T |
10742639 |
gattccctatggatgaagagattcctccagttaaattgttattccaaacactcaatgattgaagttttttcaaatagccaatttcaattggtattttgcc |
10742738 |
T |
|
| Q |
634 |
atttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagt |
733 |
Q |
| |
|
| | || ||||||||| ||||| | |||| ||||| ||||||||||| | ||||||||||||||| ||| ||| ||||||||| |||| |||||| |
|
|
| T |
10742739 |
aatcaacttgttccctgccaaagttatgactttcagatttgagcaatatgtcaagtttgtaggaatttcacctgcaaaagagttattagtaagaaaaagt |
10742838 |
T |
|
| Q |
734 |
tgttgcaattgtatcaact |
752 |
Q |
| |
|
||||||||||||| ||||| |
|
|
| T |
10742839 |
tgttgcaattgtagcaact |
10742857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 323 - 720
Target Start/End: Complemental strand, 10563510 - 10563113
Alignment:
| Q |
323 |
aacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagaca |
422 |
Q |
| |
|
|||||||||| ||||||| ||||| |||||||||||| ||||| ||||||||| |||||||| |||||||||| ||||| ||||||||||||||||| |
|
|
| T |
10563510 |
aacatgttggatggaagatagccagtaaagttattcatgactagtgagagctcaattagtgatgacatattgtaaatacaaggaggaatcataccagaca |
10563411 |
T |
|
| Q |
423 |
aattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggt |
522 |
Q |
| |
|
| |||||| ||||| ||||| || |||| |||||||| | |||| ||| |||||||||||| | |||| |||||| ||||| | | |||| |
|
|
| T |
10563410 |
atttgttctcacccaacaataaaagtgtcaagtttttgaggcggcatacttcacgtggaatatctcctcctaatttgttagaagcacacgtaaaacgcac |
10563311 |
T |
|
| Q |
523 |
taagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaatt |
622 |
Q |
| |
|
|||| |||||| ||||||||| |||||||||| ||||| ||||| || || ||| | | ||||| ||||| |||||||| ||| ||||||||||| |
|
|
| T |
10563310 |
taaggatgaaaggttccctatggatgaagggatccctccagttaaattgttaccaaaaaggtggaatgaatgaagctttttcaaagagccaatttcaatt |
10563211 |
T |
|
| Q |
623 |
ggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttatt |
720 |
Q |
| |
|
|||||||| ||| | || ||||||||||||||| ||| ||| ||||||||||||||||||| | ||||||||||||||||||||||| |||||||| |
|
|
| T |
10563210 |
ggtattttcccaatcaatttgttccctcccaaaatcaagtctatgagattggagcaatatgtcaagtttgtaggaatttctcctacaaacgagttatt |
10563113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 257 - 404
Target Start/End: Original strand, 11049560 - 11049722
Alignment:
| Q |
257 |
gcatttgttatggaagtggggattggacctgagaattgatttcccccaatcgcacaaaattggaga---------------aacatgttgggtggaagag |
341 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
11049560 |
gcatttgttatggaagtggggattggtcctgagaattgatttcccccaatcgcacaaaattggagattggggaaggcatgaaacatgttgggtggaagag |
11049659 |
T |
|
| Q |
342 |
agccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaag |
404 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11049660 |
agccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaag |
11049722 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 380 - 753
Target Start/End: Original strand, 10718681 - 10719054
Alignment:
| Q |
380 |
agtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtg |
479 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||| | | || |||||||| |||| ||||||| ||||||||||| ||| |
|
|
| T |
10718681 |
agtgatgagatattgtaaaaacaagaaggaattataccagacaaattgttaggatctgcatataaaattgtcaagtttttgagacgacatatttctggtg |
10718780 |
T |
|
| Q |
480 |
gaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttcca |
579 |
Q |
| |
|
||||| ||| |||||||||||||||| || |||| | ||| | ||||||||| || |||||||||||||||||||| ||||| || ||||| | |
|
|
| T |
10718781 |
gaataactccgtctaagttgttataaggaaccgaaagtccccataaacatgaaagatttcccatgaatgaagggattcctccagttaaattgttttttcc |
10718880 |
T |
|
| Q |
580 |
aatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaa |
679 |
Q |
| |
|
||||| || |||||| ||||||| ||| ||| ||| | ||||| ||| ||| | | || |||||| ||| | || |||||||||||||||||| |
|
|
| T |
10718881 |
aatggccagaatttgaagccttttcaaagagccaacttctactggtaatttgccaatgagcttattcccttgcaaggataactctttgagattggagcaa |
10718980 |
T |
|
| Q |
680 |
tatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaactt |
753 |
Q |
| |
|
|| || |||||||||||||||| ||| ||| |||||||||| |||| |||||||||||||||||| |||||| |
|
|
| T |
10718981 |
tacgtcaggtttgtaggaattttacctgcaaaagagttattgttaagataaagttgttgcaattgtagcaactt |
10719054 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 321 - 410
Target Start/End: Original strand, 10218450 - 10218539
Alignment:
| Q |
321 |
gaaacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaa |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10218450 |
gaaacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaa |
10218539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 323 - 751
Target Start/End: Original strand, 10748741 - 10749169
Alignment:
| Q |
323 |
aacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagaca |
422 |
Q |
| |
|
|||| ||||| ||||||||||||| ||| ||||| ||||||| ||| | | | |||||||||||||| |||| ||||||||||| ||||||||||| |
|
|
| T |
10748741 |
aacaagttggatggaagagagccaataaatttattttcggttagtgagagttgagttagtgatgagatattataaagacaagaaggaaacataccagaca |
10748840 |
T |
|
| Q |
423 |
aattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggt |
522 |
Q |
| |
|
|||||||| ||||| || ||| || | | ||||||| | |||||||||||||||||| |||| | |||||||||||| | || | || | | |
|
|
| T |
10748841 |
aattgttctcacccacatgtaaccttctaatgtttttgagattacatatttcttgtggaatctctccctttaagttgttatatgtaaccgcaatccctat |
10748940 |
T |
|
| Q |
523 |
taagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaatt |
622 |
Q |
| |
|
|||| |||||||||||||||||||||||| | ||| || ||||| || ||| ||||| | | |||||| |||||||| ||| ||||||||||| |
|
|
| T |
10748941 |
taaggatgaaagattccctatgaatgaaggaaatccaccagttaaattgtttccccaaacatttattagttgaagctttttcaaagagccaatttcaatt |
10749040 |
T |
|
| Q |
623 |
ggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgc |
722 |
Q |
| |
|
|||||||| ||| | | |||||||||||||| || || |||||||||||||||||||||| | ||||| ||||||||||||| | | ||||||||| |
|
|
| T |
10749041 |
ggtattttgccaatcacattgttccctcccacatttaagcctttgagattggagcaatatgtcaagtttgaaggaatttctcctgcgaacgagttattga |
10749140 |
T |
|
| Q |
723 |
taagtaaaagttgttgcaattgtatcaac |
751 |
Q |
| |
|
| || ||||||||||||||||| |||| |
|
|
| T |
10749141 |
tgagatcaagttgttgcaattgtagcaac |
10749169 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 375 - 508
Target Start/End: Original strand, 10764875 - 10765008
Alignment:
| Q |
375 |
caataagtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttc |
474 |
Q |
| |
|
||||||||||||||||||| |||| |||||| |||||| ||||||||||||||||| | || | ||||| || |||| |||||||| |||||||||| |
|
|
| T |
10764875 |
caataagtgatgagatattataaagacaagatggaatcttaccagacaaattgttctcgccaaaagataaaaatgtcaagtttttgaggcgacatatttc |
10764974 |
T |
|
| Q |
475 |
ttgtggaatatctctttctaagttgttataagca |
508 |
Q |
| |
|
|||||||||||||| | |||| |||||| ||||| |
|
|
| T |
10764975 |
ttgtggaatatctcctcctaatttgttagaagca |
10765008 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 21 - 298
Target Start/End: Complemental strand, 10603551 - 10603276
Alignment:
| Q |
21 |
gataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaaact |
119 |
Q |
| |
|
|||||||| ||||| ||||| |||| | ||||||||||| |||||| ||| ||| || |||||||||| || | || ||||| ||||||||||||| |
|
|
| T |
10603551 |
gataaatttcctatagaattttgcaaactacctccaaaattattattggttaaagatagtgattgcaacttactacagtttgtcaatgattttaaaaact |
10603452 |
T |
|
| Q |
120 |
ccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagcaatagtagatcttttagccatcctagagttggaacttgtccaacaaaata |
219 |
Q |
| |
|
||||||| ||||||| |||||||||||| ||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
10603451 |
ccaaatcaattgttgagttgtcacctaaaatgttcatttccaaatttagcaaataaagatcttttagcttccctagacttggaacttgtccaacaaaatg |
10603352 |
T |
|
| Q |
220 |
gttttgaccgagatcaaatattgtaatgggagatgatgcatttgttatggaagtggggattggacctgagaattgattt |
298 |
Q |
| |
|
||| | ||| | ||||||| ||| | ||| || ||||| | || |||||||||||||||||| ||||||||||| |
|
|
| T |
10603351 |
gttgtcaccaatttcaaataatgtca---aagaagaagcattcgaaattgaagtggggattggacctaagaattgattt |
10603276 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 10 - 161
Target Start/End: Original strand, 10664558 - 10664710
Alignment:
| Q |
10 |
taagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaaga |
108 |
Q |
| |
|
|||||| | ||||||||||||||| |||||||| ||| ||| |||||||||| |||||| |||||||| |||||| | || || |||| ||||| || |
|
|
| T |
10664558 |
taagttgattggataaattgcctacgaaatttgtcaatttggctccaaaattattattgcatatagaaatcacttgtagtctactacaattcgtcaagga |
10664657 |
T |
|
| Q |
109 |
ttttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattcca |
161 |
Q |
| |
|
||||| |||||||||||||| ||||| |||||||||||| |||| |||||| |
|
|
| T |
10664658 |
ctttaagaactccaaatccttagttgagttgtcacctaaactgttgaattcca |
10664710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 18 - 298
Target Start/End: Complemental strand, 10599889 - 10599611
Alignment:
| Q |
18 |
gtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaa |
116 |
Q |
| |
|
||||||||||| || || ||||| |||| | ||||||||||| |||| | ||| ||| ||| |||||||||| || | || ||||| || || |||| |
|
|
| T |
10599889 |
gtggataaatttccaatagaattttgcaaactacctccaaaattattataggttaaagatagcgattgcaacttactacagtttgtcaatgacttcaaaa |
10599790 |
T |
|
| Q |
117 |
actccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagcaatagtagatcttttagccatcctagagttggaacttgtccaacaaa |
216 |
Q |
| |
|
||| ||||||| ||||||| ||||||||||| ||| ||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| |
|
|
| T |
10599789 |
actgcaaatccattgttgagctgtcacctaaaatgttcatttccaaatttagcaaataaagatcttttagcttccctagacttggaacttgtccaacaaa |
10599690 |
T |
|
| Q |
217 |
atagttttgaccgagatcaaatattgtaatgggagatgatgcatttgttatggaagtggggattggacctgagaattgattt |
298 |
Q |
| |
|
|| ||| | ||||| ||||||| ||| | ||| || ||||||| || ||||| ||||||||||||||||||| |||| |
|
|
| T |
10599689 |
atggttgtcaccgatttcaaataatgtca---aagaagaagcatttgaaattgaagtagggattggacctgagaatttattt |
10599611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 587 - 706
Target Start/End: Original strand, 10765105 - 10765224
Alignment:
| Q |
587 |
aatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtga |
686 |
Q |
| |
|
||||| ||||| |||||||| ||| ||||||||||| ||||||| || | || ||||||||||||||| ||| ||| |||||||||||||||| || | |
|
|
| T |
10765105 |
aatgaatgaaggtttttcaaagagccaatttcaattagtattttccctgtcaatttgttccctcccaaaatcaagtctatgagattggagcaatacgtca |
10765204 |
T |
|
| Q |
687 |
ggtttgtaggaatttctcct |
706 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
10765205 |
agtttataggaatttctcct |
10765224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 10764622 - 10764694
Alignment:
| Q |
99 |
ttgtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagcaa |
171 |
Q |
| |
|
|||||||| ||||||||||||| |||||| |||| |||||||||||||||| ||| | ||||||||||||||| |
|
|
| T |
10764622 |
ttgtcaaatattttaaaaactctaaatccattgtggaattgtcacctaaattgttttcttccaaatttagcaa |
10764694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 304
Target Start/End: Complemental strand, 10610511 - 10610227
Alignment:
| Q |
18 |
gtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaa |
116 |
Q |
| |
|
|||||||||||||| |||||||||||||| | |||||||| || ||||| |||||||||| || | ||| || | || |||||| ||||||||| |
|
|
| T |
10610511 |
gtggataaattgccaatgaaatttggcaaactacctccaaacttattattagatatagaaagcttttctagtttactacagtttgtcaaatattttaaaa |
10610412 |
T |
|
| Q |
117 |
actccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagcaatagtagatcttttagccatcctagagttggaacttgtccaacaaa |
216 |
Q |
| |
|
|||| ||||| | |||||||||| ||| |||||||||||||||||| | ||| | |||||| || | ||||| |||||||||||||||| || |
|
|
| T |
10610411 |
actctaaatctatagttgaattgttaccgaaatagttgtattccaaactcagccagtaaagatctggtaacttctctagacttggaacttgtccaaccaa |
10610312 |
T |
|
| Q |
217 |
atagttttgaccgagatcaaata-ttgtaatgggagatgatgcatttgttatggaagtggggattggacctgagaattgatttccccca |
304 |
Q |
| |
|
|| ||||||||| | ||||| || ||||| | || || ||||||| |||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
10610311 |
attgttttgacctaaatcaattatttgta----gggaagaagcatttgcaatggaaacagggattggacctgagaattgatttcctcca |
10610227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10661476 - 10661623
Alignment:
| Q |
1 |
atagctcaataagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt |
100 |
Q |
| |
|
|||||| | |||||| ||||||||||||||||| |||||||||||||| || ||||||| ||| || |||||||| |||| | ||||| | || |
|
|
| T |
10661476 |
atagctgactaagttgagtggataaattgcctacaaaatttggcaagttacccccaaaatgattactggatatagaaatcactcttagtttagtgaagtt |
10661575 |
T |
|
| Q |
101 |
-gtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaa |
147 |
Q |
| |
|
||||| | ||| ||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10661576 |
tgtcaaggttttcaaaaactccaaatccttagttgaattgtcacctaa |
10661623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 10653590 - 10653655
Alignment:
| Q |
1 |
atagctcaataagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttat |
66 |
Q |
| |
|
|||||| | |||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||| |
|
|
| T |
10653590 |
atagctgactaagttgagtggataaattgcctacaaaatttggcaagttacctccaaaattattat |
10653655 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 169
Target Start/End: Original strand, 10748423 - 10748575
Alignment:
| Q |
18 |
gtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaa |
116 |
Q |
| |
|
||||||||| |||| ||| |||||||||| | |||||||| || ||||| |||||||| ||||| | ||| || |||| |||||| | ||||||| |
|
|
| T |
10748423 |
gtggataaactgccaatggaatttggcaaactacctccaaacttattattacatatagaaaccacttctagtttactacaatttgtcaaatactttaaaa |
10748522 |
T |
|
| Q |
117 |
actccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttagc |
169 |
Q |
| |
|
|||| ||||| | |||||||||| ||| |||||||||| ||||||||||||| |
|
|
| T |
10748523 |
actctaaatcgatagttgaattgttaccgaaatagttgtcttccaaatttagc |
10748575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 148
Target Start/End: Complemental strand, 7191814 - 7191675
Alignment:
| Q |
10 |
taagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaaga |
108 |
Q |
| |
|
|||||| |||||||||||| || ||| |||||||||| || ||||||||||| ||| | |||||||| |||| | | ||| || | || ||||| || |
|
|
| T |
7191814 |
taagttgagtggataaattcccaatggaatttggcaaattacctccaaaattattaaaggatatagaaaacactagtagtttactacagtttgtcaagga |
7191715 |
T |
|
| Q |
109 |
ttttaaaaactccaaatcctttgttgaattgtcacctaaa |
148 |
Q |
| |
|
|||||||||||| |||||||| || ||||||| ||||||| |
|
|
| T |
7191714 |
ttttaaaaactctaaatccttagtggaattgttacctaaa |
7191675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 19 - 149
Target Start/End: Complemental strand, 10557720 - 10557589
Alignment:
| Q |
19 |
tggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaaa |
117 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||||||||| |||| | ||||||| ||||||||||||| || | || ||||| ||||||||||| |
|
|
| T |
10557720 |
tggataaattgcctgccaaatttggcaaactacctccaaaattattatgggatatagaacacacttgcaacttactacagttagtcaatgattttaaaaa |
10557621 |
T |
|
| Q |
118 |
ctccaaatcctttgttgaattgtcacctaaat |
149 |
Q |
| |
|
||||||||| |||||||| ||||| |||| |
|
|
| T |
10557620 |
aatcaaatccttagttgaattttcaccaaaat |
10557589 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 612 - 705
Target Start/End: Complemental strand, 10548987 - 10548894
Alignment:
| Q |
612 |
caatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcc |
705 |
Q |
| |
|
||||||||||||||||||||||| | ||||||||||||| ||| | || | ||| || ||| | |||| ||| | |||||||||||||||||| |
|
|
| T |
10548987 |
caatttcaattggtatttttccaatcaaattgttccctctcaaggataagtatttaaggttgaaacaatttgtcaagtttgtaggaatttctcc |
10548894 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 144
Target Start/End: Complemental strand, 10549588 - 10549467
Alignment:
| Q |
24 |
aaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaagattttaaaaactcca |
122 |
Q |
| |
|
||||| ||||||||| ||||||| | ||||||||||| |||| | |||||||| ||||||| ||| || |||| ||||| | ||||||||| || | |
|
|
| T |
10549588 |
aaattacctatgaaacttggcaaactacctccaaaattattatgggatatagaaaatgcttgcaaattactacaatttgtcaatggttttaaaaattcta |
10549489 |
T |
|
| Q |
123 |
aatcctttgttgaattgtcacc |
144 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
10549488 |
aatccttagttgaattgtcacc |
10549467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 451 - 554
Target Start/End: Complemental strand, 10549148 - 10549045
Alignment:
| Q |
451 |
caagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaa |
550 |
Q |
| |
|
|||| ||||||| |||||||||||||||||||||||| || || |||||||||| || ||||||| | | || |||||||||||||| ||||| | |
|
|
| T |
10549148 |
caagtttttgagacgacatatttcttgtggaatatctccctccaaattgttataagaaactgaaaaacctatcaaatatgaaagattccctaagaatgga |
10549049 |
T |
|
| Q |
551 |
ggga |
554 |
Q |
| |
|
|||| |
|
|
| T |
10549048 |
ggga |
10549045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Complemental strand, 10579571 - 10579522
Alignment:
| Q |
257 |
gcatttgttatggaagtggggattggacctgagaattgatttcccccaat |
306 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
10579571 |
gcatttgcaatggaagttgggattggaccagagaattgatttcctccaat |
10579522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 10590072 - 10590121
Alignment:
| Q |
257 |
gcatttgttatggaagtggggattggacctgagaattgatttcccccaat |
306 |
Q |
| |
|
||||||| |||||||| ||||||||||| |||||||||||||| ||||| |
|
|
| T |
10590072 |
gcatttgcaatggaagttgggattggaccagagaattgatttcctccaat |
10590121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 98; Significance: 7e-48; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 376 - 752
Target Start/End: Complemental strand, 12905617 - 12905240
Alignment:
| Q |
376 |
aataagtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgtt-cacaccccgatttaaaattgacaagcttttgaggtgacatatttc |
474 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||| ||| |||| ||||||||||| | ||||| | ||||| || |||| ||||||| ||||||||| |
|
|
| T |
12905617 |
aataagtgatgagatattataaagacaagaaggtatcttaccggacaaattgtttctcacccaaagctaaaaatgtcaagtgtttgaggaaacatatttc |
12905518 |
T |
|
| Q |
475 |
ttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggttaatttattt |
574 |
Q |
| |
|
|||||||||||||| || || |||||| || || ||| | | ||||||||||||| ||| |||||||||||||||||||| |||||||| || ||| |
|
|
| T |
12905517 |
ttgtggaatatctccctcaaaattgttaccagaaactgatagacgtgttaagcttgaaatatttcctatgaatgaagggattccaccggttaacttgttt |
12905418 |
T |
|
| Q |
575 |
ttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattgg |
674 |
Q |
| |
|
|||||| || || |||||| |||||||| ||| | |||||| |||||||||| ||| | | || |||||| ||||||||| |||||||||| |
|
|
| T |
12905417 |
ctccaaacactcattgtttgaagctttttcaaagagccgatttcagttggtattttaccaatgagatggttcccattcaaatacaataacttgagattgg |
12905318 |
T |
|
| Q |
675 |
agcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
|||||||||| |||||||||||||| || ||||||| ||| |||||||| || | |||||||||||| |||| ||||| |
|
|
| T |
12905317 |
agcaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaataagttgttgcaaatgtagcaact |
12905240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 323 - 752
Target Start/End: Complemental strand, 12956561 - 12956132
Alignment:
| Q |
323 |
aacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagaca |
422 |
Q |
| |
|
|||||||||||||||| |||||||| || |||||| ||||| | || ||||||||||||||||||| |||| ||||||||||||| |||| |||| |
|
|
| T |
12956561 |
aacatgttgggtggaaaagagccatgaaggttattttgtgttaccgcaagggcaataagtgatgagatattataaagacaagaaggaatcttaccggaca |
12956462 |
T |
|
| Q |
423 |
aattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggt |
522 |
Q |
| |
|
|||||||| ||||| | ||||| || |||| |||| | ||||||||||||||||||||||| || || |||||| || | ||| | | || |
|
|
| T |
12956461 |
aattgttctcacccaaagctaaaaatgtcaagtgtttgcagcaacatatttcttgtggaatatctccctcaaaattgttacgagaagctgatagacgtgt |
12956362 |
T |
|
| Q |
523 |
taagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaatt |
622 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||| || ||||| || ||| |||||| | || | |||||| |||||||| ||| | |||||| || |
|
|
| T |
12956361 |
taagcttgaaagatttcctatgaatgaagggattccaccagttaacttgtttctccaaacagtcattctttgaagctttttcaaagagccgatttcagtt |
12956262 |
T |
|
| Q |
623 |
ggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgc |
722 |
Q |
| |
|
|||||||| ||||| | || |||||| |||| |||| ||||||||||||||||||||| | |||||| ||||| || ||||||| ||||||||||| |
|
|
| T |
12956261 |
ggtattttaccattgagatggttcccattcaaaaacaataatttgagattggagcaatatgtcaagtttgttggaatctcacctacaaaagagttattgc |
12956162 |
T |
|
| Q |
723 |
taagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
| || ||||| ||||||| |||| ||||| |
|
|
| T |
12956161 |
tgagagaaagtcgttgcaaatgtagcaact |
12956132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 376 - 752
Target Start/End: Complemental strand, 12897995 - 12897619
Alignment:
| Q |
376 |
aataagtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttct |
475 |
Q |
| |
|
|||||||||||||||||| |||| ||||||||||||| |||| ||||||||||| |||| | | |||| || |||| ||||||| |||||||||| |
|
|
| T |
12897995 |
aataagtgatgagatattataaagacaagaaggaatcttaccggacaaattgttgacactcaaacctaaatatgtcaagtgtttgaggaaacatatttct |
12897896 |
T |
|
| Q |
476 |
tgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttt |
575 |
Q |
| |
|
||||||||||||| || || ||||| | || || ||| | | ||||||||||||||||| || |||||||||||||||||||||||||| || || | |
|
|
| T |
12897895 |
tgtggaatatctccctcaaaattgttttcagaaactgacagacgtgttaagcttgaaagatttccaatgaatgaagggattcctccggttaaattgttat |
12897796 |
T |
|
| Q |
576 |
tccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattgga |
675 |
Q |
| |
|
||| || || ||||||||| |||||||| ||| | | |||| |||||||||| ||| | | || |||||| ||||||||| ||||||||||| |
|
|
| T |
12897795 |
tccgaacaaacattgattgaagctttttcaaagagccgaattcagttggtattttaccaatgagatggttcccattcaaatacaataacttgagattgga |
12897696 |
T |
|
| Q |
676 |
gcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
||||||||| |||||||||||||| || ||||||| ||| |||||| | || | ||| |||||||| |||| ||||| |
|
|
| T |
12897695 |
gcaatatgtcaggtttgtaggaatctcacctacaaaagaattattggtgagaataaggtgttgcaaatgtagcaact |
12897619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 323 - 752
Target Start/End: Complemental strand, 12947124 - 12946695
Alignment:
| Q |
323 |
aacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagaca |
422 |
Q |
| |
|
||||||||||||| || |||||||| || || ||||| ||||| | || ||||||||||||||||||| |||| ||||||||||||| |||| |||| |
|
|
| T |
12947124 |
aacatgttgggtgcaaaagagccatgaaggtgattcagtgttaccgaaaggacaataagtgatgagatattataaagacaagaaggaatcttaccggaca |
12947025 |
T |
|
| Q |
423 |
aattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggt |
522 |
Q |
| |
|
|||||||| || | | ||||| || |||| |||||| |||||||||||||||||| |||| || || ||||| | || || | | | | || |
|
|
| T |
12947024 |
aattgttctcattcaaagctaaaaatgtcaagtgtttgagaaaacatatttcttgtggaatgtctccctcaaaattgttttcagaaactaatagacgtgt |
12946925 |
T |
|
| Q |
523 |
taagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaatt |
622 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||| |||| || |||||| || | || || ||||| || ||||| ||| | |||||| || |
|
|
| T |
12946924 |
taagcttgaaagatttccaatgaatgaagggattcctccgattaaattgtttttcgcaacagtcattgcttgaaccttcttcaaagagccgatttcagtt |
12946825 |
T |
|
| Q |
623 |
ggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgc |
722 |
Q |
| |
|
|||||||| || | | || |||||| | |||| ||||| |||||| ||||| |||||||| |||||||||||||| || ||| ||| |||||||||| |
|
|
| T |
12946824 |
ggtattttaccgatgagatggttcccactcaaaaacaaaaatttgagtttggaacaatatgtcaggtttgtaggaatctcacctgcaaaagagttattgt |
12946725 |
T |
|
| Q |
723 |
taagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
| || |||||||||||||| |||| ||||| |
|
|
| T |
12946724 |
tgagaaaaagttgttgcaaatgtagcaact |
12946695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 323 - 752
Target Start/End: Complemental strand, 12930759 - 12930330
Alignment:
| Q |
323 |
aacatgttgggtggaagagagccataaaagttattcattgttagtgtgagctcaataagtgatgagatattgtaaaaacaagaaggaatcataccagaca |
422 |
Q |
| |
|
|||||||||||||||| |||||||| || || |||| ||||| || || |||||||||||||||||| |||| ||||||||||||| |||| |||| |
|
|
| T |
12930759 |
aacatgttgggtggaaaagagccatgaaggtgattctgtgttaccgtaagggaaataagtgatgagatattataaagacaagaaggaatcttaccggaca |
12930660 |
T |
|
| Q |
423 |
aattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttcttgtggaatatctctttctaagttgttataagcaaatgaaaaatcggt |
522 |
Q |
| |
|
|||||||| ||| | | |||||||| |||| ||||||| |||||||||||||||||| | | || ||||| | | | || | | || |
|
|
| T |
12930659 |
aattgttctcactcacacctaaaattgtcaagtgtttgaggaaacatatttcttgtggaatcttaccggagaaattgttctcacccaaatttagacgtgt |
12930560 |
T |
|
| Q |
523 |
taagcttgaaagattccctatgaatgaagggattcctccggttaatttatttttccaaatgggcaatgattgaagttttttcaacgaggcaatttcaatt |
622 |
Q |
| |
|
||||| ||||||||| ||||| ||||||||||||||| ||||||| | || |||| || | | || |||||| |||||||| ||| ||||||||||| |
|
|
| T |
12930559 |
taagcatgaaagatttcctataaatgaagggattccttcggttaaatggttattcccaacagatattgcttgaagctttttcaaagagccaatttcaatt |
12930460 |
T |
|
| Q |
623 |
ggtatttttccatttaaattgttccctcccaaatacaaatctttgagattggagcaatatgtgaggtttgtaggaatttctcctacaagagagttattgc |
722 |
Q |
| |
|
|||||||| ||||| | || |||||| ||||||||| ||||||||||||||||||||| |||||||||||||| || ||||||| ||| |||||| |
|
|
| T |
12930459 |
ggtattttaccattgagatggttcccattcaaatacaataatttgagattggagcaatatgtcaggtttgtaggaatctcacctacaaaagaattattgg |
12930360 |
T |
|
| Q |
723 |
taagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
| || | ||| |||||||| |||| ||||| |
|
|
| T |
12930359 |
tgagaataagatgttgcaaatgtagcaact |
12930330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 12956892 - 12956834
Alignment:
| Q |
8 |
aataagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttat |
66 |
Q |
| |
|
||||||||||||||||||||| |||||| |||||||||| | |||||||||||| |||| |
|
|
| T |
12956892 |
aataagttcagtggataaattccctatggaatttggcaaatggcctccaaaattattat |
12956834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 10 - 168
Target Start/End: Complemental strand, 12905999 - 12905840
Alignment:
| Q |
10 |
taagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataatt-gtcaaaga |
108 |
Q |
| |
|
||||||||||||| || ||||||||| |||||||||| | ||||||||||| ||| | ||| |||||||| | | ||| | |||| |||||| | |
|
|
| T |
12905999 |
taagttcagtggaaaagttgcctatggaatttggcaaatgtcctccaaaattattagaatctattgaaagcacgtatagtttactgcaatttgtcaaata |
12905900 |
T |
|
| Q |
109 |
ttttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttag |
168 |
Q |
| |
|
|||||||||||| |||||||| |||||| ||| |||||||| |||| || ||||| |||| |
|
|
| T |
12905899 |
ttttaaaaactctaaatccttagttgaaatgttacctaaattgttgaatcccaaacttag |
12905840 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 11 - 149
Target Start/End: Complemental strand, 12931087 - 12930948
Alignment:
| Q |
11 |
aagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttattgtttatagaaagcacttgcaacttagtataa-ttgtcaaagat |
109 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||| | ||||||||||| |||| ||| |||||||| | | ||| | || |||||||| || |
|
|
| T |
12931087 |
aagttcagtcgataaattgcctatggaatttggcaaatgacctccaaaattattataagatatcgaaagcacgtatagtttactgcaatttgtcaaatat |
12930988 |
T |
|
| Q |
110 |
tttaaaaactccaaatcctttgttgaattgtcacctaaat |
149 |
Q |
| |
|
||||||||||| |||||| | |||||||||| |||||||| |
|
|
| T |
12930987 |
tttaaaaactctaaatccatagttgaattgttacctaaat |
12930948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 46
Target Start/End: Complemental strand, 12947452 - 12947417
Alignment:
| Q |
11 |
aagttcagtggataaattgcctatgaaatttggcaa |
46 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |
|
|
| T |
12947452 |
aagttcagtggataaattgcctatggaatttggcaa |
12947417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 81; Significance: 1e-37; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 376 - 752
Target Start/End: Original strand, 17925185 - 17925561
Alignment:
| Q |
376 |
aataagtgatgagatattgtaaaaacaagaaggaatcataccagacaaattgttcacaccccgatttaaaattgacaagcttttgaggtgacatatttct |
475 |
Q |
| |
|
||||||||||||||| || |||| |||||| |||||| |||| || ||||||||| ||||| | ||||| || |||| |||| || |||||||||| |
|
|
| T |
17925185 |
aataagtgatgagatgttataaagacaagatggaatcttaccggaaaaattgttctcacccaaagctaaaaatgtcaagtgtttgcggcaacatatttct |
17925284 |
T |
|
| Q |
476 |
tgtggaatatctctttctaagttgttataagcaaatgaaaaatcggttaagcttgaaagattccctatgaatgaagggattcctccggttaatttatttt |
575 |
Q |
| |
|
||||||||||||| || || |||||| |||| ||| | | ||||||| ||||||||| ||||||||||||||||||||||| ||||| || || | |
|
|
| T |
17925285 |
tgtggaatatctccctcaaaattgttaagagcagctgatagacgtgttaagcatgaaagatttcctatgaatgaagggattcctccagttaaattgttat |
17925384 |
T |
|
| Q |
576 |
tccaaatgggcaatgattgaagttttttcaacgaggcaatttcaattggtatttttccatttaaattgttccctcccaaatacaaatctttgagattgga |
675 |
Q |
| |
|
| || | || | ||||||||||||||| ||| | |||||| |||||||||| ||| | | || |||||| | |||| |||| ||||||||| || |
|
|
| T |
17925385 |
gcgcaacagtcatggcttgaagttttttcaaagagccgatttcagttggtattttaccaatgagatggttcccactcaaaaacaataatttgagattaga |
17925484 |
T |
|
| Q |
676 |
gcaatatgtgaggtttgtaggaatttctcctacaagagagttattgctaagtaaaagttgttgcaattgtatcaact |
752 |
Q |
| |
|
|||||||| |||||||||||||| || ||||||| ||| |||||||| || |||||||| ||||| |||| ||||| |
|
|
| T |
17925485 |
acaatatgtcaggtttgtaggaatctcacctacaaaagaattattgctgagaaaaagttgctgcaaatgtagcaact |
17925561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 168
Target Start/End: Original strand, 17924893 - 17924962
Alignment:
| Q |
99 |
ttgtcaaagattttaaaaactccaaatcctttgttgaattgtcacctaaatagttgtattccaaatttag |
168 |
Q |
| |
|
|||||||| ||||||||||||| |||||| | |||||||| |||||||||| ||| | |||||||||||| |
|
|
| T |
17924893 |
ttgtcaaatattttaaaaactctaaatccatagttgaattatcacctaaattgttttcttccaaatttag |
17924962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 17924803 - 17924859
Alignment:
| Q |
10 |
taagttcagtggataaattgcctatgaaatttggcaagttgcctccaaaattgttat |
66 |
Q |
| |
|
||||||||||||||||||| |||||| |||||||||| | ||||||||||| |||| |
|
|
| T |
17924803 |
taagttcagtggataaattccctatggaatttggcaaatgacctccaaaattattat |
17924859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 257 - 306
Target Start/End: Original strand, 31468804 - 31468853
Alignment:
| Q |
257 |
gcatttgttatggaagtggggattggacctgagaattgatttcccccaat |
306 |
Q |
| |
|
||||||| ||||||||| ||||||||||||||||||||||| || ||||| |
|
|
| T |
31468804 |
gcatttgatatggaagttgggattggacctgagaattgattcccaccaat |
31468853 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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