View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5744_low_19 (Length: 264)

Name: NF5744_low_19
Description: NF5744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5744_low_19
NF5744_low_19
[»] scaffold0008 (2 HSPs)
scaffold0008 (51-249)||(42784-42988)
scaffold0008 (1-46)||(86061-86106)
[»] scaffold0080 (3 HSPs)
scaffold0080 (1-46)||(11504-11549)
scaffold0080 (2-45)||(30879-30922)
scaffold0080 (2-45)||(36345-36388)
[»] scaffold0022 (3 HSPs)
scaffold0022 (1-46)||(40628-40673)
scaffold0022 (1-46)||(74348-74393)
scaffold0022 (1-46)||(55751-55796)
[»] chr6 (20 HSPs)
chr6 (1-46)||(27564240-27564285)
chr6 (1-45)||(22435699-22435743)
chr6 (1-45)||(22444097-22444141)
chr6 (1-46)||(16926045-16926090)
chr6 (1-46)||(24294189-24294234)
chr6 (1-46)||(25114381-25114426)
chr6 (1-46)||(27189265-27189310)
chr6 (1-46)||(27259930-27259975)
chr6 (1-46)||(28261604-28261649)
chr6 (1-46)||(28284267-28284312)
chr6 (1-46)||(28340353-28340398)
chr6 (1-45)||(19866517-19866561)
chr6 (1-45)||(22828762-22828806)
chr6 (1-46)||(2873210-2873255)
chr6 (1-46)||(16961889-16961934)
chr6 (1-46)||(18406351-18406396)
chr6 (1-46)||(20634347-20634392)
chr6 (1-46)||(22760862-22760907)
chr6 (1-46)||(23080298-23080343)
chr6 (1-46)||(25608268-25608313)
[»] chr3 (23 HSPs)
chr3 (1-46)||(3687527-3687572)
chr3 (1-45)||(14875000-14875044)
chr3 (1-46)||(5423431-5423476)
chr3 (1-46)||(6602320-6602365)
chr3 (1-46)||(15587893-15587938)
chr3 (1-46)||(16805448-16805493)
chr3 (1-45)||(12499833-12499877)
chr3 (1-45)||(16693749-16693793)
chr3 (2-46)||(53383520-53383564)
chr3 (1-46)||(10007184-10007229)
chr3 (1-46)||(10907794-10907839)
chr3 (1-46)||(12888293-12888338)
chr3 (1-46)||(13254274-13254319)
chr3 (1-46)||(15346746-15346791)
chr3 (1-46)||(15723435-15723480)
chr3 (1-46)||(16637357-16637402)
chr3 (1-46)||(20060555-20060600)
chr3 (1-46)||(48427031-48427076)
chr3 (1-45)||(15340854-15340898)
chr3 (1-45)||(15401018-15401062)
chr3 (1-46)||(5109112-5109157)
chr3 (1-46)||(17491434-17491479)
chr3 (1-33)||(16755202-16755234)
[»] scaffold0501 (1 HSPs)
scaffold0501 (1-45)||(4191-4235)
[»] scaffold0215 (2 HSPs)
scaffold0215 (1-45)||(28728-28772)
scaffold0215 (1-43)||(28836-28878)
[»] scaffold0079 (1 HSPs)
scaffold0079 (1-45)||(35493-35537)
[»] scaffold0056 (1 HSPs)
scaffold0056 (1-45)||(3618-3662)
[»] scaffold0042 (1 HSPs)
scaffold0042 (1-45)||(38085-38129)
[»] scaffold0017 (3 HSPs)
scaffold0017 (1-45)||(18331-18375)
scaffold0017 (1-46)||(58011-58056)
scaffold0017 (1-45)||(195752-195796)
[»] chr8 (18 HSPs)
chr8 (1-41)||(19980003-19980043)
chr8 (1-46)||(15535414-15535459)
chr8 (1-46)||(17672728-17672773)
chr8 (1-46)||(18858608-18858653)
chr8 (1-46)||(19482769-19482814)
chr8 (1-46)||(22131746-22131791)
chr8 (1-46)||(22422597-22422642)
chr8 (1-46)||(30311849-30311894)
chr8 (4-42)||(22041862-22041900)
chr8 (1-46)||(19114721-19114766)
chr8 (1-46)||(20016968-20017013)
chr8 (1-46)||(22118880-22118925)
chr8 (1-46)||(22127664-22127709)
chr8 (1-46)||(32602176-32602221)
chr8 (1-45)||(21165243-21165287)
chr8 (1-45)||(21920453-21920497)
chr8 (1-42)||(21783125-21783166)
chr8 (1-46)||(23652072-23652117)
[»] chr4 (14 HSPs)
chr4 (1-45)||(16353509-16353553)
chr4 (1-46)||(8388377-8388422)
chr4 (1-46)||(14301981-14302026)
chr4 (1-46)||(18225448-18225493)
chr4 (1-45)||(15145887-15145931)
chr4 (1-46)||(1640342-1640387)
chr4 (1-46)||(8051625-8051670)
chr4 (1-46)||(12478565-12478610)
chr4 (1-46)||(14682532-14682577)
chr4 (1-46)||(18613826-18613871)
chr4 (1-46)||(19776795-19776840)
chr4 (1-46)||(23957712-23957757)
chr4 (1-46)||(27713301-27713346)
chr4 (1-46)||(40475005-40475050)
[»] scaffold0621 (1 HSPs)
scaffold0621 (3-46)||(3428-3471)
[»] scaffold2004 (1 HSPs)
scaffold2004 (1-46)||(1074-1119)
[»] scaffold0454 (1 HSPs)
scaffold0454 (1-46)||(8934-8979)
[»] scaffold0333 (1 HSPs)
scaffold0333 (1-46)||(17650-17695)
[»] scaffold0285 (1 HSPs)
scaffold0285 (1-46)||(9221-9266)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-46)||(25210-25255)
[»] scaffold0228 (1 HSPs)
scaffold0228 (1-46)||(20234-20279)
[»] scaffold0109 (2 HSPs)
scaffold0109 (1-46)||(14390-14435)
scaffold0109 (1-46)||(40149-40194)
[»] scaffold0023 (1 HSPs)
scaffold0023 (1-46)||(2770-2815)
[»] chr7 (15 HSPs)
chr7 (1-46)||(15621-15666)
chr7 (1-46)||(8709559-8709604)
chr7 (1-46)||(10872644-10872689)
chr7 (1-46)||(11235484-11235529)
chr7 (1-46)||(11551373-11551418)
chr7 (1-46)||(14041649-14041694)
chr7 (1-46)||(14213628-14213673)
chr7 (1-46)||(14334350-14334395)
chr7 (1-46)||(14351679-14351724)
chr7 (1-46)||(14956508-14956553)
chr7 (1-46)||(15159328-15159373)
chr7 (1-46)||(44789622-44789667)
chr7 (1-45)||(12689457-12689501)
chr7 (1-45)||(15147156-15147200)
chr7 (1-46)||(11770512-11770557)
[»] chr5 (19 HSPs)
chr5 (1-46)||(27520303-27520348)
chr5 (1-46)||(27612251-27612296)
chr5 (1-46)||(27666934-27666979)
chr5 (1-46)||(37289940-37289985)
chr5 (1-45)||(20801295-20801339)
chr5 (1-46)||(14998183-14998228)
chr5 (1-46)||(16358399-16358444)
chr5 (1-46)||(19771857-19771902)
chr5 (1-46)||(21337738-21337783)
chr5 (1-46)||(22136565-22136610)
chr5 (1-46)||(22331331-22331376)
chr5 (1-46)||(29474517-29474562)
chr5 (1-46)||(34568391-34568436)
chr5 (1-46)||(40710677-40710722)
chr5 (1-46)||(41772739-41772784)
chr5 (1-45)||(22349817-22349861)
chr5 (1-46)||(18781011-18781056)
chr5 (1-46)||(25428330-25428375)
chr5 (1-46)||(27683844-27683889)
[»] chr2 (18 HSPs)
chr2 (1-46)||(44384372-44384417)
chr2 (1-45)||(23189515-23189559)
chr2 (1-45)||(24677086-24677130)
chr2 (1-45)||(24706284-24706328)
chr2 (1-46)||(9485812-9485857)
chr2 (1-46)||(10870446-10870491)
chr2 (1-46)||(16926956-16927001)
chr2 (1-46)||(17000596-17000641)
chr2 (1-46)||(22323658-22323703)
chr2 (1-46)||(23073459-23073504)
chr2 (1-46)||(24263966-24264011)
chr2 (1-46)||(24711630-24711675)
chr2 (1-46)||(27219612-27219657)
chr2 (1-46)||(27372865-27372910)
chr2 (1-46)||(41607187-41607232)
chr2 (1-45)||(21143843-21143887)
chr2 (1-45)||(21324068-21324112)
chr2 (1-45)||(24875552-24875596)
[»] chr1 (16 HSPs)
chr1 (1-46)||(16348930-16348975)
chr1 (1-46)||(21234065-21234110)
chr1 (1-46)||(21832282-21832327)
chr1 (1-46)||(21838930-21838975)
chr1 (1-46)||(41351996-41352041)
chr1 (1-46)||(50618732-50618777)
chr1 (1-46)||(51331827-51331872)
chr1 (1-45)||(21026154-21026198)
chr1 (1-45)||(24792950-24792994)
chr1 (1-46)||(430450-430495)
chr1 (1-46)||(21862707-21862752)
chr1 (1-46)||(33389363-33389408)
chr1 (1-45)||(19108349-19108393)
chr1 (1-45)||(22503623-22503667)
chr1 (5-46)||(17043353-17043394)
chr1 (1-46)||(21750920-21750965)
[»] scaffold0676 (1 HSPs)
scaffold0676 (1-45)||(8011-8055)
[»] scaffold0297 (1 HSPs)
scaffold0297 (1-45)||(7958-8002)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-45)||(51610-51654)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-45)||(55256-55300)
[»] scaffold0312 (1 HSPs)
scaffold0312 (1-46)||(55-100)
[»] scaffold0138 (1 HSPs)
scaffold0138 (1-46)||(7352-7397)
[»] scaffold0122 (1 HSPs)
scaffold0122 (1-46)||(38213-38258)
[»] scaffold0084 (1 HSPs)
scaffold0084 (1-46)||(7217-7262)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-46)||(16154-16199)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-46)||(108076-108121)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-46)||(24798-24843)
[»] scaffold1985 (1 HSPs)
scaffold1985 (1-45)||(605-649)
[»] scaffold0739 (1 HSPs)
scaffold0739 (1-45)||(1049-1093)
[»] scaffold0431 (1 HSPs)
scaffold0431 (1-45)||(9363-9407)
[»] scaffold0081 (2 HSPs)
scaffold0081 (1-45)||(20599-20643)
scaffold0081 (1-45)||(36023-36067)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-45)||(10471-10515)
scaffold0028 (1-45)||(16933-16977)
[»] scaffold0130 (1 HSPs)
scaffold0130 (3-45)||(44910-44952)
[»] scaffold1602 (1 HSPs)
scaffold1602 (1-46)||(332-377)
[»] scaffold1423 (1 HSPs)
scaffold1423 (1-46)||(1647-1692)
[»] scaffold0908 (1 HSPs)
scaffold0908 (1-46)||(1041-1086)
[»] scaffold0894 (1 HSPs)
scaffold0894 (1-46)||(3922-3967)
[»] scaffold0575 (1 HSPs)
scaffold0575 (1-46)||(3577-3622)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-46)||(447-492)
[»] scaffold0256 (1 HSPs)
scaffold0256 (1-46)||(23339-23384)
[»] scaffold0120 (1 HSPs)
scaffold0120 (1-46)||(8016-8061)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-46)||(30941-30986)
[»] scaffold0006 (1 HSPs)
scaffold0006 (1-46)||(103229-103274)


Alignment Details
Target: scaffold0008 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 51 - 249
Target Start/End: Original strand, 42784 - 42988
Alignment:
Q  51 gtaagtggggcatggttgatcgcttcttggacattaatatggaaagatcaggttttaaacgt-----tactagactatttgacnnnnnnnnn-tcatttg 144  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||     ||||||| ||||||||          || ||||    
T  42784 gtaagtggggcatggttgatcgcttgttggacattaatatggaaggatcaggttttaaacgtcttgctactagattatttgacaaaaaaaaaatcttttg 42883  T
Q  145 taattgattaatagcaggatcatataatatcaatatcatttaactaaaaaatatggggtaatgaaagatattgaatacaatagtatcaataatatctgtt 244  Q
    ||| |||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||| |    
T  42884 taactgattaatagcaggatcatatagtatcaatatcatttaactaaaaaatatagggtaatgaaagatattgaatacaatattatcaataatatctgct 42983  T
Q  245 taatt 249  Q
    |||||    
T  42984 taatt 42988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 86061 - 86106
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||    
T  86061 agtgttgaaggagaagaaactttatgctaaattatctaagtgtgaa 86106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11504 - 11549
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  11504 agtgttgaaagagaagaaattttatgctaaattgtctaagtgtgaa 11549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 30922 - 30879
Alignment:
Q  2 gtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||    
T  30922 gtgttaaaagaaaagaaactttatgctaaattatctaagtgtga 30879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 36388 - 36345
Alignment:
Q  2 gtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||| ||||| |||||| |||||||||||||||||||||||||    
T  36388 gtgttaaaagaaaagaaactttatgctaaattatctaagtgtga 36345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 3)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40673 - 40628
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  40673 agtgttgaaagagaagaaactttatgctaaattatctaagtgtgaa 40628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 74393 - 74348
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  74393 agtgttgaaagagaagaaactttatgctaaattatctaagtgtgaa 74348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55796 - 55751
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  55796 agtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaa 55751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27564240 - 27564285
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  27564240 agtgttgaaagagaagaaactttatgctaaattatctaagtgtgaa 27564285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22435743 - 22435699
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  22435743 agtgttgaaagagaagaaactttatcctaaattatctaagtgtga 22435699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22444141 - 22444097
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||    
T  22444141 agtgttgaaagagaagaaactttatcctaaattatctaagtgtga 22444097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16926045 - 16926090
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| || |||||||||||||||    
T  16926045 agtgttgaaagagaagaaactttatgccaagttatctaagtgtgaa 16926090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24294189 - 24294234
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  24294189 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 24294234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25114426 - 25114381
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||  ||||||||||||||||||    
T  25114426 agtgttgaaagagaagaaactttatgtcaaattatctaagtgtgaa 25114381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27189310 - 27189265
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  27189310 agtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaa 27189265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27259930 - 27259975
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  27259930 agtgttgaaagagaagaaactttatgctaaattgtccaagtgtgaa 27259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28261604 - 28261649
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  28261604 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 28261649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28284312 - 28284267
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  28284312 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 28284267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28340353 - 28340398
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  28340353 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 28340398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19866561 - 19866517
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||| |||||||| ||||    
T  19866561 agtgttgaaagagaagaaactttatgctaaactatctaagcgtga 19866517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22828762 - 22828806
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  22828762 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 22828806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2873210 - 2873255
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||| ||||||||  ||||||||||||| ||||||||||||    
T  2873210 agtgttgaaggagaagaagctttatgctaaattgtctaagtgtgaa 2873255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16961889 - 16961934
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| || | |||||||||||||    
T  16961889 agtgttgaaagagaagaaactttatgccaagtcatctaagtgtgaa 16961934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18406351 - 18406396
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| | ||||||||||| | ||||||||||    
T  18406351 agtgttgaaagagaagaaactatatgctaaattgtttaagtgtgaa 18406396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20634347 - 20634392
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  20634347 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 20634392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22760862 - 22760907
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  22760862 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 22760907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23080343 - 23080298
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||| |||||||||||||| |||||||||||||||| |||| ||||    
T  23080343 agtgctgaaagagaagaaactttatgctaaattatcaaagtttgaa 23080298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25608268 - 25608313
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| || |||||||||    
T  25608268 agtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaa 25608313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 23)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3687572 - 3687527
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  3687572 agtgttgaaagagaagaaactttatgctaaattatctaagtgtgaa 3687527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 14875000 - 14875044
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  14875000 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 14875044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5423431 - 5423476
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  5423431 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 5423476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6602365 - 6602320
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  6602365 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 6602320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15587893 - 15587938
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  15587893 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 15587938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16805448 - 16805493
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16805448 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 16805493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12499877 - 12499833
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||||| |||||||||| |||||||||||||||||||||||||    
T  12499877 agtgttgatagagaagaaactttatgctaaattatctaagtgtga 12499833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16693793 - 16693749
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  16693793 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtga 16693749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 53383520 - 53383564
Alignment:
Q  2 gtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||||||||| ||||||||||||| ||||||||||||    
T  53383520 gtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 53383564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10007229 - 10007184
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  10007229 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 10007184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10907839 - 10907794
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  10907839 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 10907794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12888338 - 12888293
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  12888338 agtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaa 12888293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13254319 - 13254274
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  13254319 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 13254274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15346746 - 15346791
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  15346746 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 15346791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15723435 - 15723480
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  15723435 agtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaa 15723480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16637402 - 16637357
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  16637402 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 16637357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20060555 - 20060600
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  20060555 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 20060600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48427076 - 48427031
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  48427076 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 48427031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15340898 - 15340854
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  15340898 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 15340854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15401018 - 15401062
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  15401018 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 15401062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 5109112 - 5109157
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||| |||||  ||||||||||||| ||||||||||||    
T  5109112 agtgttgaaagaaaagaagctttatgctaaattgtctaagtgtgaa 5109157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17491479 - 17491434
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  17491479 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 17491434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 16755202 - 16755234
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaatt 33  Q
    ||||||||||||||||||| |||||||||||||    
T  16755202 agtgttgaaagagaagaaactttatgctaaatt 16755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0501 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 4235 - 4191
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  4235 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 4191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0215
Description:

Target: scaffold0215; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 28728 - 28772
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  28728 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 28772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0215; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 28836 - 28878
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgt 43  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  28836 agtgttgaaagagaagaaactttatgctaaattatctaagtgt 28878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 35537 - 35493
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  35537 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 35493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 3618 - 3662
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  3618 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 3662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38085 - 38129
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  38085 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 38129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 3)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18331 - 18375
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  18331 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 18375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 58056 - 58011
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  58056 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 58011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 195752 - 195796
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  195752 agtgttgaaagagaagaaactttatgctaaactatctaagtgtga 195796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19980043 - 19980003
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagt 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  19980043 agtgttgaaagagaagaaattttatgctaaattatctaagt 19980003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15535459 - 15535414
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  15535459 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 15535414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17672728 - 17672773
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  17672728 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 17672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18858653 - 18858608
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18858653 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 18858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19482769 - 19482814
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  19482769 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 19482814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22131746 - 22131791
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  22131746 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 22131791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22422597 - 22422642
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  22422597 agtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaa 22422642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30311849 - 30311894
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  30311849 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 30311894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 22041900 - 22041862
Alignment:
Q  4 gttgaaagagaagaaattttatgctaaattatctaagtg 42  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  22041900 gttgaaagagaagaaactttatgctaaattatctaagtg 22041862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19114766 - 19114721
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  19114766 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 19114721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20016968 - 20017013
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  20016968 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 20017013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22118880 - 22118925
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  22118880 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 22118925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22127664 - 22127709
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  22127664 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 22127709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32602221 - 32602176
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  32602221 agtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaa 32602176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21165243 - 21165287
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||    
T  21165243 agtgttaaaagagaagaaactttatgctaaattatccaagtgtga 21165287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21920453 - 21920497
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  21920453 agtgttgaaagagaagaaactttatgcgaaattgtctaagtgtga 21920497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 21783125 - 21783166
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtg 42  Q
    ||||||||||||||||||  ||||||||||||| ||||||||    
T  21783125 agtgttgaaagagaagaagctttatgctaaattgtctaagtg 21783166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23652117 - 23652072
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||    
T  23652117 agtgttgaaagagaagaagctatatgctaaattgtctaagtgtgaa 23652072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 16353509 - 16353553
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| |||||||||||||||||||||||||    
T  16353509 agtgttgaaagagaagaaactttatgctaaattatctaagtgtga 16353553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8388422 - 8388377
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8388422 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 8388377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14301981 - 14302026
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14301981 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 14302026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18225448 - 18225493
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  18225448 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 18225493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15145887 - 15145931
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||||||||||| |||| |||||||||||||||||||||||||    
T  15145887 agtgttgaaagagaggaaactttatgctaaattatctaagtgtga 15145931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1640342 - 1640387
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  1640342 agtgttgaaagagaagaaactttatgctaaattttcaaagtgtgaa 1640387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8051625 - 8051670
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  8051625 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 8051670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12478610 - 12478565
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  12478610 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 12478565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14682577 - 14682532
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  14682577 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 14682532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18613826 - 18613871
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  18613826 agtgttgaaagagaagaaactttatgcaaaattgtctaagtgtgaa 18613871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19776795 - 19776840
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  19776795 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 19776840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23957757 - 23957712
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  23957757 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 23957712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27713346 - 27713301
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  27713346 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 27713301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40475050 - 40475005
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  40475050 agtgttgaaagagaagaaactttatgctaaattgtcgaagtgtgaa 40475005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 3471 - 3428
Alignment:
Q  3 tgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||| ||||||||||||||||||||||||||    
T  3471 tgttgaaagagaagaaactttatgctaaattatctaagtgtgaa 3428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2004 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold2004
Description:

Target: scaffold2004; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1074 - 1119
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  1074 agtgttgaaagagaagaagctttatgctaaattatctaagtgtgaa 1119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8979 - 8934
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  8979 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 8934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17695 - 17650
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||    
T  17695 agtgttgaaagagaagaatctttatgctaaattatctaagtgtgaa 17650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9266 - 9221
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  9266 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 9221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25210 - 25255
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||| |||||| ||||||||||||||||||||||||||    
T  25210 agtgttgaaagataagaaactttatgctaaattatctaagtgtgaa 25255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20279 - 20234
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  20279 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 20234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14390 - 14435
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  14390 agtgttgaaagagaagaaactttatgctaaattttctaagtgtgaa 14435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40194 - 40149
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  40194 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 40149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2770 - 2815
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  2770 agtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaa 2815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15621 - 15666
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  15621 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 15666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8709604 - 8709559
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  8709604 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 8709559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10872689 - 10872644
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||||||    
T  10872689 agtgttgaaagagaagaaactttatcctaaattgtctaagtgtgaa 10872644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11235484 - 11235529
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  11235484 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 11235529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11551373 - 11551418
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  11551373 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 11551418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14041694 - 14041649
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||    
T  14041694 agtgttgaaagagaataaactttatgctaaattatcaaagtgtgaa 14041649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14213673 - 14213628
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  14213673 agtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaa 14213628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14334395 - 14334350
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  14334395 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 14334350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14351724 - 14351679
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||| ||| |||||||||||||||| |||||||||    
T  14351724 agtgttgaaagagaataaactttatgctaaattatcaaagtgtgaa 14351679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14956553 - 14956508
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  14956553 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 14956508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15159328 - 15159373
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  15159328 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 15159373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44789622 - 44789667
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  44789622 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 44789667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12689501 - 12689457
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  12689501 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 12689457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15147156 - 15147200
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  15147156 agtgttgaaagagaagaaactttatgcaaaattgtctaagtgtga 15147200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11770512 - 11770557
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||||||||| || |||| |||||| ||||||||||||    
T  11770512 agtgttgaaagagaagaagttatatgttaaattgtctaagtgtgaa 11770557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27520348 - 27520303
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  27520348 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 27520303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27612296 - 27612251
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  27612296 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 27612251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27666934 - 27666979
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  27666934 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 27666979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37289940 - 37289985
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  37289940 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 37289985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20801339 - 20801295
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||| |||||||||||||| |||||||||||||||||||||||||    
T  20801339 agtgctgaaagagaagaaactttatgctaaattatctaagtgtga 20801295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 14998183 - 14998228
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  14998183 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 14998228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16358444 - 16358399
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  16358444 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 16358399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 19771902 - 19771857
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  19771902 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 19771857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21337738 - 21337783
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||| |||||||||||||| |||||||||||||||| |||||||||    
T  21337738 agtgctgaaagagaagaaactttatgctaaattatcaaagtgtgaa 21337783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 22136610 - 22136565
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||    
T  22136610 agtgttgaaagagaagaaactttttgctaaattgtctaagtgtgaa 22136565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22331331 - 22331376
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  22331331 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 22331376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29474517 - 29474562
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||    
T  29474517 agtgttgaaagagaagaaactttatgataaattatcgaagtgtgaa 29474562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34568436 - 34568391
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  34568436 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 34568391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40710722 - 40710677
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  40710722 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 40710677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41772784 - 41772739
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||    
T  41772784 agtgttgaaagagaagaatttttatgctaaattgtctaaatgtgaa 41772739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 22349861 - 22349817
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  22349861 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 22349817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18781056 - 18781011
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||| ||| ||||| ||||||||||||    
T  18781056 agtgttgaaagagaagaaactttttgcgaaattgtctaagtgtgaa 18781011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 25428375 - 25428330
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  25428375 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 25428330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27683844 - 27683889
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||| |||||||||  ||||||||||||| ||||||||||||    
T  27683844 agtgttgagagagaagaagctttatgctaaattgtctaagtgtgaa 27683889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44384372 - 44384417
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  44384372 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 44384417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 23189559 - 23189515
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||||| |||||||||||    
T  23189559 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtga 23189515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 24677130 - 24677086
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| |||||||||||| |||||||||||||||||||||||||    
T  24677130 agtgttaaaagagaagaaactttatgctaaattatctaagtgtga 24677086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24706284 - 24706328
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  24706284 agtgttgaaagagaagaaactttatgctaaattatctaaatgtga 24706328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9485857 - 9485812
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  9485857 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 9485812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10870491 - 10870446
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  10870491 agtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaa 10870446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16927001 - 16926956
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  16927001 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 16926956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 17000641 - 17000596
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  17000641 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 17000596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 22323658 - 22323703
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  22323658 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 22323703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23073504 - 23073459
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  23073504 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 23073459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24264011 - 24263966
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  24264011 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 24263966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 24711675 - 24711630
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  24711675 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 24711630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27219657 - 27219612
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  27219657 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 27219612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27372910 - 27372865
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  27372910 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 27372865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41607187 - 41607232
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  41607187 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 41607232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21143843 - 21143887
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  21143843 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 21143887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 21324068 - 21324112
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||| ||||||||| ||||||||||| |||||||||||||    
T  21324068 agtgttgaaggagaagaaactttatgctaaactatctaagtgtga 21324112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24875552 - 24875596
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  24875552 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 24875596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16348930 - 16348975
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  16348930 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 16348975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21234065 - 21234110
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  21234065 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 21234110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21832327 - 21832282
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  21832327 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 21832282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21838975 - 21838930
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  21838975 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 21838930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41351996 - 41352041
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||    
T  41351996 agtgttgaaagagaagaaactttatgctaaattgtctaagtgtgaa 41352041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 50618732 - 50618777
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||||||||||||| |||||||||    
T  50618732 agtgttgaaagagaagaaactttatgctaaattatcaaagtgtgaa 50618777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51331827 - 51331872
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||    
T  51331827 agtgttgaaagagaagaagttttatgctaaattgtctaagtgtgaa 51331872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 21026198 - 21026154
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  21026198 agtgttgaaagagaagaaactttatgctaaaatatctaagtgtga 21026154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 24792950 - 24792994
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||||||||| |||||| |||||||||||||||||||||||||    
T  24792950 agtgttgaaagaaaagaaactttatgctaaattatctaagtgtga 24792994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 430450 - 430495
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||    
T  430450 agtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaa 430495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21862707 - 21862752
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||| |||||||||||  ||||||||||||||||||||||||||    
T  21862707 agtgttcaaagagaagaagctttatgctaaattatctaagtgtgaa 21862752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33389363 - 33389408
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  33389363 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 33389408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 19108393 - 19108349
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  19108393 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 19108349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 22503623 - 22503667
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||    
T  22503623 agtgttaaaagagaagaaactttatgctaaaatatctaagtgtga 22503667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 17043353 - 17043394
Alignment:
Q  5 ttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||| ||||||||||||| || |||||||||    
T  17043353 ttgaaagagaagaaactttatgctaaattgtcaaagtgtgaa 17043394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21750965 - 21750920
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||| |||||||  ||||||||||||| ||||||||||||    
T  21750965 agtgttgaaaaagaagaagctttatgctaaattgtctaagtgtgaa 21750920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0676 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 8055 - 8011
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||    
T  8055 agtgttgaaagagaagaaactttatgctaaattatctaaatgtga 8011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0297 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0297
Description:

Target: scaffold0297; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 7958 - 8002
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  7958 agtgttgaaagagaagaaactttatgctaaactatctaagtgtga 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 51610 - 51654
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||    
T  51610 agtgttgaaagagaagaaactttatgctaaactatctaagtgtga 51654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 55256 - 55300
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| |||||||||||| |||||||||||||||||||||||||    
T  55256 agtgtttaaagagaagaaactttatgctaaattatctaagtgtga 55300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 100 - 55
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||||||||||||||||    
T  100 agtgttgaaagagaagaagctttatgcgaaattatctaagtgtgaa 55  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7352 - 7397
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  7352 agtgttgaaagagaagaaactttatgctaaattgtcaaagtgtgaa 7397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38213 - 38258
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| ||||||||||||    
T  38213 agtgttgaaagagaagaagctttatgctaaattgtctaagtgtgaa 38258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7262 - 7217
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  7262 agtgttgaaagagaagaaactttatgcgaaattgtctaagtgtgaa 7217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16199 - 16154
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| |||||||||| || ||||||||||||    
T  16199 agtgttgaaagagaagaaaatttatgctaacttgtctaagtgtgaa 16154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 108076 - 108121
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||||| ||||||||||||    
T  108076 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtgaa 108121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24798 - 24843
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||||||||||||||||| || |||||||||||||| |||||||||    
T  24798 agtgttgaaagagaagaagttatatgctaaattatcaaagtgtgaa 24843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1985 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1985
Description:

Target: scaffold1985; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 605 - 649
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||    
T  605 agtgttaaaagagaagaaactttatgctaaattatcaaagtgtga 649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0739 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0739
Description:

Target: scaffold0739; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1093 - 1049
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||||||||| |||||| ||||||||||| |||||||||||||    
T  1093 agtgttgaaagaaaagaaactttatgctaaactatctaagtgtga 1049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 9407 - 9363
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  9407 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 9363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 20643 - 20599
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| | |||||||||| |||||||||||||||||||||||||    
T  20643 agtgttaagagagaagaaactttatgctaaattatctaagtgtga 20599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 36067 - 36023
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    |||||| | |||||||||| |||||||||||||||||||||||||    
T  36067 agtgttaatagagaagaaactttatgctaaattatctaagtgtga 36023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10515 - 10471
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  10515 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 10471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 16977 - 16933
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||||| ||||||| ||||| |||||||||||    
T  16977 agtgttgaaagagaagaaactttatgccaaattgtctaagtgtga 16933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 45
Target Start/End: Original strand, 44910 - 44952
Alignment:
Q  3 tgttgaaagagaagaaattttatgctaaattatctaagtgtga 45  Q
    ||||||||||||||||| ||||||| ||||| |||||||||||    
T  44910 tgttgaaagagaagaaactttatgccaaattgtctaagtgtga 44952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 332 - 377
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| || |||||||||    
T  332 agtgttgaaagagaagaagctttatgctaaattgtcaaagtgtgaa 377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1423 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1647 - 1692
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  1647 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 1692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1041 - 1086
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  1041 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0894 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0894
Description:

Target: scaffold0894; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3967 - 3922
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||||||||| |||| |||||||    
T  3967 agtgttgaaagagaagaagctttatgctaaattgtctatgtgtgaa 3922  T

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Target: scaffold0575 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3622 - 3577
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||| || |||||||||||||| || |||||||||    
T  3622 agtgttgaaagagaaaaagttttatgctaaattgtcaaagtgtgaa 3577  T

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Target: scaffold0278 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 492 - 447
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| || |||||||| ||||||    
T  492 agtgttgaaagagaagaaactttatgcgaagttatctaactgtgaa 447  T

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Target: scaffold0256 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23339 - 23384
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||||    
T  23339 agtgttgaaagagaagaaactttatgccaaactgtctaagtgtgaa 23384  T

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Target: scaffold0120 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8061 - 8016
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  ||||||| ||||| ||||||||||||    
T  8061 agtgttgaaagagaagaagctttatgcgaaattgtctaagtgtgaa 8016  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30986 - 30941
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    ||||||||||||||||||  |||||| |||||| ||||||||||||    
T  30986 agtgttgaaagagaagaagctttatgttaaattgtctaagtgtgaa 30941  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 103274 - 103229
Alignment:
Q  1 agtgttgaaagagaagaaattttatgctaaattatctaagtgtgaa 46  Q
    |||| |||||||||||||  |||||||||||||||| |||||||||    
T  103274 agtgctgaaagagaagaagctttatgctaaattatcaaagtgtgaa 103229  T

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