View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5744_low_8 (Length: 422)

Name: NF5744_low_8
Description: NF5744
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5744_low_8
NF5744_low_8
[»] chr5 (55 HSPs)
chr5 (74-413)||(13391195-13391535)
chr5 (324-383)||(30004561-30004620)
chr5 (316-386)||(10737777-10737847)
chr5 (316-385)||(21071499-21071568)
chr5 (341-381)||(39084468-39084508)
chr5 (316-383)||(14311294-14311361)
chr5 (325-383)||(35514800-35514858)
chr5 (323-383)||(36569659-36569720)
chr5 (316-384)||(7201036-7201104)
chr5 (316-383)||(34578352-34578419)
chr5 (341-383)||(24802252-24802294)
chr5 (341-383)||(25353725-25353767)
chr5 (341-383)||(30187774-30187816)
chr5 (323-372)||(156207-156256)
chr5 (323-372)||(18076072-18076121)
chr5 (316-381)||(18279486-18279551)
chr5 (324-381)||(28770628-28770685)
chr5 (325-378)||(32701757-32701810)
chr5 (323-383)||(15916147-15916207)
chr5 (342-382)||(18730774-18730814)
chr5 (351-383)||(19617962-19617994)
chr5 (323-383)||(21052475-21052535)
chr5 (323-383)||(30239283-30239343)
chr5 (309-383)||(7949068-7949140)
chr5 (352-383)||(10862382-10862413)
chr5 (352-383)||(14347091-14347122)
chr5 (352-383)||(19617991-19618022)
chr5 (347-382)||(33866731-33866766)
chr5 (348-383)||(37109422-37109457)
chr5 (324-383)||(41621427-41621486)
chr5 (316-350)||(1003288-1003322)
chr5 (327-381)||(25947875-25947929)
chr5 (316-382)||(33620017-33620083)
chr5 (352-385)||(6042352-6042385)
chr5 (342-383)||(6042730-6042771)
chr5 (350-383)||(12256375-12256408)
chr5 (354-383)||(18279042-18279071)
chr5 (319-372)||(18740203-18740256)
chr5 (323-372)||(19000800-19000849)
chr5 (319-372)||(19928731-19928784)
chr5 (319-372)||(22981827-22981880)
chr5 (323-372)||(34819452-34819501)
chr5 (347-383)||(2671150-2671186)
chr5 (316-372)||(4330081-4330137)
chr5 (355-383)||(5118462-5118490)
chr5 (323-383)||(7401216-7401276)
chr5 (323-379)||(10862237-10862293)
chr5 (323-383)||(17639937-17639997)
chr5 (323-383)||(18046534-18046594)
chr5 (347-383)||(20224895-20224931)
chr5 (287-383)||(25908495-25908590)
chr5 (355-383)||(25947751-25947779)
chr5 (324-372)||(27189606-27189654)
chr5 (347-383)||(27279803-27279839)
chr5 (323-363)||(39986109-39986149)
[»] chr7 (45 HSPs)
chr7 (323-381)||(31857651-31857709)
chr7 (321-383)||(43977577-43977639)
chr7 (316-381)||(47764591-47764656)
chr7 (291-383)||(38444457-38444548)
chr7 (323-383)||(40081832-40081892)
chr7 (316-383)||(27689372-27689439)
chr7 (324-383)||(33253633-33253692)
chr7 (316-383)||(37220330-37220397)
chr7 (316-383)||(40934494-40934561)
chr7 (323-383)||(21993856-21993916)
chr7 (323-378)||(8238691-8238746)
chr7 (341-384)||(28387641-28387684)
chr7 (316-383)||(37143157-37143224)
chr7 (316-383)||(39535066-39535133)
chr7 (291-378)||(44157987-44158073)
chr7 (306-381)||(44887392-44887466)
chr7 (323-381)||(41541844-41541902)
chr7 (292-385)||(19837580-19837672)
chr7 (323-372)||(24424487-24424536)
chr7 (352-385)||(26626301-26626334)
chr7 (323-383)||(2285530-2285590)
chr7 (323-383)||(6669502-6669562)
chr7 (341-381)||(11832176-11832216)
chr7 (347-383)||(24838116-24838152)
chr7 (316-372)||(30740183-30740239)
chr7 (347-383)||(48549698-48549734)
chr7 (323-383)||(48648047-48648107)
chr7 (347-383)||(48698306-48698342)
chr7 (347-382)||(8898258-8898293)
chr7 (316-383)||(19532471-19532538)
chr7 (352-383)||(23561119-23561150)
chr7 (316-383)||(37331119-37331186)
chr7 (327-382)||(38442972-38443027)
chr7 (341-383)||(37105163-37105205)
chr7 (325-383)||(40619731-40619789)
chr7 (341-383)||(41492385-41492427)
chr7 (342-383)||(11749837-11749878)
chr7 (316-385)||(26626416-26626485)
chr7 (323-372)||(28643021-28643070)
chr7 (342-382)||(8761182-8761222)
chr7 (291-383)||(22745185-22745277)
chr7 (323-383)||(23560970-23561030)
chr7 (323-383)||(25846874-25846933)
chr7 (341-385)||(30071855-30071899)
chr7 (352-384)||(33258329-33258361)
[»] chr4 (56 HSPs)
chr4 (316-383)||(36157303-36157370)
chr4 (316-383)||(49487826-49487893)
chr4 (323-383)||(32319548-32319608)
chr4 (323-383)||(35910932-35910992)
chr4 (324-383)||(13128617-13128676)
chr4 (323-383)||(3060399-3060459)
chr4 (316-380)||(8562814-8562878)
chr4 (323-383)||(16833394-16833454)
chr4 (323-383)||(22638090-22638150)
chr4 (323-383)||(23719303-23719363)
chr4 (323-383)||(27579267-27579327)
chr4 (323-383)||(48148816-48148876)
chr4 (324-372)||(52822875-52822923)
chr4 (316-383)||(8459509-8459576)
chr4 (323-382)||(16069568-16069627)
chr4 (323-378)||(17534341-17534396)
chr4 (316-383)||(23257009-23257076)
chr4 (316-383)||(27704669-27704736)
chr4 (323-381)||(1842589-1842647)
chr4 (316-378)||(43700461-43700523)
chr4 (323-383)||(6121318-6121378)
chr4 (316-380)||(7603992-7604056)
chr4 (354-386)||(25298421-25298453)
chr4 (324-372)||(28541397-28541445)
chr4 (323-383)||(33122476-33122536)
chr4 (316-383)||(36230007-36230075)
chr4 (347-383)||(44801814-44801850)
chr4 (352-383)||(6840987-6841018)
chr4 (340-383)||(11997444-11997487)
chr4 (316-383)||(33181562-33181629)
chr4 (316-383)||(33230362-33230429)
chr4 (316-383)||(34321066-34321133)
chr4 (350-381)||(41376479-41376510)
chr4 (352-383)||(44258901-44258932)
chr4 (342-381)||(51948128-51948167)
chr4 (341-383)||(12919463-12919504)
chr4 (341-383)||(15639056-15639098)
chr4 (325-383)||(26629485-26629543)
chr4 (354-383)||(6452204-6452233)
chr4 (319-372)||(10386906-10386959)
chr4 (342-383)||(10502318-10502359)
chr4 (342-383)||(12886474-12886515)
chr4 (323-372)||(24281386-24281435)
chr4 (323-372)||(28540700-28540749)
chr4 (319-372)||(28756853-28756906)
chr4 (319-372)||(39788734-39788787)
chr4 (342-383)||(44723804-44723845)
chr4 (323-372)||(52225113-52225162)
chr4 (316-381)||(53850015-53850080)
chr4 (319-372)||(55935505-55935558)
chr4 (323-363)||(8168759-8168799)
chr4 (323-383)||(10590657-10590717)
chr4 (324-372)||(23625025-23625073)
chr4 (323-363)||(29520565-29520605)
chr4 (347-383)||(37133413-37133449)
chr4 (342-382)||(45918364-45918404)
[»] scaffold0039 (1 HSPs)
scaffold0039 (316-385)||(53512-53581)
[»] chr8 (45 HSPs)
chr8 (291-383)||(35065564-35065654)
chr8 (323-383)||(7057361-7057421)
chr8 (323-383)||(28237339-28237399)
chr8 (316-383)||(33744370-33744436)
chr8 (323-381)||(1430518-1430576)
chr8 (316-382)||(13155470-13155536)
chr8 (291-383)||(10579082-10579173)
chr8 (341-385)||(32723281-32723325)
chr8 (316-380)||(34214674-34214738)
chr8 (316-383)||(4718144-4718211)
chr8 (316-383)||(8082674-8082741)
chr8 (316-383)||(10167670-10167737)
chr8 (316-383)||(11140818-11140885)
chr8 (316-383)||(15287333-15287400)
chr8 (316-383)||(15467702-15467769)
chr8 (342-385)||(32974831-32974874)
chr8 (341-383)||(290553-290595)
chr8 (323-381)||(10675532-10675590)
chr8 (316-382)||(42217313-42217379)
chr8 (316-381)||(15104877-15104941)
chr8 (323-384)||(32374825-32374886)
chr8 (342-383)||(38442484-38442525)
chr8 (347-383)||(4017555-4017591)
chr8 (316-372)||(24685309-24685365)
chr8 (323-383)||(32723752-32723812)
chr8 (323-383)||(41258902-41258962)
chr8 (323-363)||(41738830-41738870)
chr8 (352-383)||(4017704-4017735)
chr8 (342-385)||(35731448-35731491)
chr8 (352-383)||(37438677-37438708)
chr8 (323-382)||(45184061-45184120)
chr8 (323-385)||(15890206-15890268)
chr8 (349-382)||(3530626-3530659)
chr8 (323-372)||(4137543-4137592)
chr8 (323-372)||(7636613-7636662)
chr8 (323-372)||(11386100-11386149)
chr8 (352-385)||(15189399-15189432)
chr8 (319-372)||(16355903-16355956)
chr8 (323-372)||(32099303-32099352)
chr8 (352-385)||(32974091-32974124)
chr8 (338-378)||(14913483-14913523)
chr8 (324-372)||(19182464-19182512)
chr8 (341-381)||(32974231-32974271)
chr8 (324-372)||(42174663-42174711)
chr8 (351-383)||(43165749-43165781)
[»] scaffold0045 (1 HSPs)
scaffold0045 (316-380)||(22027-22091)
[»] chr6 (31 HSPs)
chr6 (323-383)||(12145488-12145548)
chr6 (323-383)||(31842509-31842569)
chr6 (316-383)||(1131021-1131088)
chr6 (316-383)||(7621112-7621179)
chr6 (316-383)||(9242429-9242496)
chr6 (316-385)||(16539421-16539490)
chr6 (316-383)||(12757288-12757355)
chr6 (316-383)||(32603322-32603389)
chr6 (317-383)||(6153797-6153863)
chr6 (323-381)||(14863849-14863907)
chr6 (292-385)||(11989839-11989932)
chr6 (323-383)||(20680671-20680731)
chr6 (323-383)||(22787251-22787311)
chr6 (323-383)||(29758511-29758571)
chr6 (316-383)||(5385446-5385513)
chr6 (342-381)||(12693349-12693388)
chr6 (352-383)||(15837449-15837480)
chr6 (323-378)||(15837570-15837625)
chr6 (352-383)||(17205190-17205221)
chr6 (341-383)||(4058910-4058952)
chr6 (341-383)||(13685531-13685573)
chr6 (352-382)||(27771878-27771908)
chr6 (352-385)||(30579325-30579358)
chr6 (357-385)||(3992548-3992576)
chr6 (347-383)||(6366637-6366673)
chr6 (287-378)||(10117931-10118022)
chr6 (324-380)||(14657362-14657418)
chr6 (355-383)||(18030850-18030878)
chr6 (347-383)||(30579471-30579507)
chr6 (291-363)||(32462222-32462294)
chr6 (291-383)||(34556413-34556504)
[»] chr3 (46 HSPs)
chr3 (323-383)||(34785078-34785138)
chr3 (323-383)||(38944971-38945031)
chr3 (291-383)||(45953966-45954058)
chr3 (316-383)||(4183180-4183247)
chr3 (316-383)||(7014351-7014418)
chr3 (316-383)||(11935827-11935894)
chr3 (323-381)||(29359201-29359259)
chr3 (323-381)||(54767807-54767865)
chr3 (323-383)||(17605142-17605202)
chr3 (323-383)||(34784671-34784731)
chr3 (323-383)||(46175634-46175694)
chr3 (347-383)||(49029493-49029529)
chr3 (316-383)||(15444931-15444998)
chr3 (340-385)||(27814379-27814425)
chr3 (323-381)||(46799394-46799452)
chr3 (341-383)||(49422347-49422389)
chr3 (342-383)||(33479373-33479414)
chr3 (342-383)||(45692961-45693002)
chr3 (324-385)||(45753791-45753852)
chr3 (347-383)||(2008777-2008813)
chr3 (341-381)||(11194791-11194831)
chr3 (323-383)||(29843689-29843749)
chr3 (323-383)||(31270988-31271048)
chr3 (347-383)||(31798127-31798163)
chr3 (323-383)||(41752542-41752602)
chr3 (348-384)||(45394213-45394249)
chr3 (347-382)||(7758569-7758604)
chr3 (342-377)||(20221909-20221944)
chr3 (328-383)||(28540999-28541054)
chr3 (316-383)||(31410598-31410665)
chr3 (316-383)||(40593662-40593729)
chr3 (352-383)||(43563590-43563621)
chr3 (323-382)||(55453785-55453844)
chr3 (352-382)||(11691787-11691817)
chr3 (323-381)||(36710985-36711043)
chr3 (323-385)||(48585699-48585761)
chr3 (291-381)||(52313215-52313305)
chr3 (323-372)||(1487485-1487534)
chr3 (324-385)||(33390534-33390595)
chr3 (323-372)||(51367972-51368021)
chr3 (323-372)||(53947774-53947823)
chr3 (325-381)||(24681495-24681551)
chr3 (342-378)||(35546789-35546825)
chr3 (323-383)||(41309453-41309513)
chr3 (324-372)||(49611804-49611852)
chr3 (323-383)||(54626951-54627011)
[»] chr2 (42 HSPs)
chr2 (291-383)||(8778305-8778396)
chr2 (323-379)||(20892618-20892674)
chr2 (323-383)||(31765150-31765210)
chr2 (316-381)||(725573-725638)
chr2 (316-381)||(6334161-6334226)
chr2 (316-380)||(24664441-24664505)
chr2 (323-383)||(25903561-25903621)
chr2 (288-383)||(4902294-4902389)
chr2 (288-383)||(4949692-4949787)
chr2 (316-383)||(22039360-22039427)
chr2 (323-382)||(35428890-35428949)
chr2 (341-383)||(14370113-14370155)
chr2 (325-383)||(16970934-16970992)
chr2 (326-380)||(25921743-25921797)
chr2 (347-381)||(29419365-29419399)
chr2 (316-378)||(36065766-36065828)
chr2 (342-383)||(1598731-1598772)
chr2 (341-378)||(8846786-8846823)
chr2 (323-372)||(10214329-10214378)
chr2 (323-383)||(21099754-21099814)
chr2 (323-383)||(33940468-33940528)
chr2 (342-381)||(128733-128772)
chr2 (315-382)||(16101251-16101318)
chr2 (323-378)||(30098858-30098913)
chr2 (350-385)||(36387001-36387036)
chr2 (316-383)||(41738016-41738083)
chr2 (316-383)||(45194578-45194645)
chr2 (341-383)||(18677110-18677152)
chr2 (356-385)||(5288359-5288388)
chr2 (342-383)||(19030022-19030063)
chr2 (350-383)||(32210368-32210401)
chr2 (342-383)||(41974292-41974333)
chr2 (352-385)||(41974438-41974471)
chr2 (323-372)||(45416366-45416415)
chr2 (350-378)||(6828154-6828182)
chr2 (355-383)||(10300398-10300426)
chr2 (342-382)||(11688014-11688054)
chr2 (323-383)||(11723559-11723619)
chr2 (323-383)||(12262787-12262847)
chr2 (352-384)||(14463338-14463370)
chr2 (355-383)||(22304005-22304033)
chr2 (323-383)||(24861789-24861848)
[»] chr1 (48 HSPs)
chr1 (323-383)||(15608848-15608908)
chr1 (316-380)||(52752365-52752429)
chr1 (319-382)||(7065056-7065119)
chr1 (323-381)||(21068628-21068686)
chr1 (316-382)||(26674755-26674821)
chr1 (323-381)||(28750106-28750164)
chr1 (325-383)||(31730571-31730629)
chr1 (316-381)||(12857665-12857730)
chr1 (327-383)||(1895859-1895915)
chr1 (323-379)||(10066359-10066415)
chr1 (316-372)||(10371097-10371153)
chr1 (341-385)||(46136833-46136877)
chr1 (316-382)||(2284394-2284459)
chr1 (341-383)||(26922213-26922255)
chr1 (342-383)||(32155238-32155279)
chr1 (316-381)||(36772519-36772584)
chr1 (319-372)||(46184962-46185015)
chr1 (342-383)||(51053704-51053745)
chr1 (350-383)||(51194846-51194879)
chr1 (347-383)||(3617328-3617364)
chr1 (323-363)||(41807736-41807776)
chr1 (324-383)||(28215930-28215989)
chr1 (323-382)||(28259787-28259846)
chr1 (341-383)||(5333676-5333718)
chr1 (353-383)||(6057185-6057215)
chr1 (341-383)||(6057291-6057333)
chr1 (324-378)||(21390900-21390954)
chr1 (341-383)||(35937726-35937768)
chr1 (341-383)||(49804201-49804243)
chr1 (338-372)||(50934238-50934272)
chr1 (347-381)||(51345505-51345539)
chr1 (323-372)||(4058340-4058389)
chr1 (354-383)||(10066208-10066237)
chr1 (323-372)||(10372968-10373017)
chr1 (352-385)||(28215808-28215841)
chr1 (352-385)||(28750252-28750285)
chr1 (316-385)||(34340620-34340689)
chr1 (323-372)||(36796570-36796619)
chr1 (341-382)||(42928671-42928712)
chr1 (342-383)||(43684751-43684792)
chr1 (323-372)||(45323787-45323836)
chr1 (323-372)||(45583096-45583145)
chr1 (319-372)||(46668152-46668205)
chr1 (319-372)||(48468436-48468489)
chr1 (323-383)||(44452004-44452064)
chr1 (323-383)||(45681253-45681313)
chr1 (347-383)||(45967394-45967430)
chr1 (323-363)||(46917666-46917706)
[»] scaffold0050 (1 HSPs)
scaffold0050 (322-385)||(64688-64751)
[»] scaffold0009 (1 HSPs)
scaffold0009 (316-383)||(262799-262866)
[»] scaffold0115 (1 HSPs)
scaffold0115 (316-380)||(42905-42969)
[»] scaffold0071 (1 HSPs)
scaffold0071 (316-383)||(17195-17262)
[»] scaffold0175 (1 HSPs)
scaffold0175 (342-383)||(26606-26647)
[»] scaffold0003 (1 HSPs)
scaffold0003 (350-383)||(352654-352687)
[»] scaffold0223 (1 HSPs)
scaffold0223 (287-383)||(28159-28254)
[»] scaffold0040 (1 HSPs)
scaffold0040 (347-383)||(48849-48885)
[»] scaffold0032 (1 HSPs)
scaffold0032 (316-380)||(37779-37843)
[»] scaffold0018 (1 HSPs)
scaffold0018 (323-379)||(146397-146453)
[»] scaffold0555 (1 HSPs)
scaffold0555 (352-383)||(3578-3609)
[»] scaffold0076 (1 HSPs)
scaffold0076 (344-383)||(16348-16387)
[»] scaffold0049 (1 HSPs)
scaffold0049 (316-379)||(323-386)
[»] scaffold0007 (1 HSPs)
scaffold0007 (324-381)||(178404-178460)
[»] scaffold0483 (1 HSPs)
scaffold0483 (355-383)||(9463-9491)
[»] scaffold0233 (1 HSPs)
scaffold0233 (354-382)||(18621-18649)
[»] scaffold0036 (2 HSPs)
scaffold0036 (327-363)||(32643-32679)
scaffold0036 (342-382)||(32689-32729)


Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 74 - 413
Target Start/End: Complemental strand, 13391535 - 13391195
Alignment:
Q  74 agagggtacaagttcaagttcatcactaaattaacaaatttccgtcactaacagtttagtgatgaaaatggaataatgtca-gagatccctcaagggttg 172  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  13391535 agagggtacaagttcaagttcatcactgaattaacaaatttccgtcactaacagtttagtgatgaaaatggaataatgtcaagagatccctcaagggttg 13391436  T
Q  173 gacaacgctcgaagaatcactctcaatccaaatattacgccaagtattttgtgcttaaacttacaaaataaaatcatattttttagggacnnnnnnngtt 272  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||       |||    
T  13391435 gacaacgcttgaagaatcactctcaatccaaatattacgccaagtattttgtgcttaagcttacaaaataaaatcatattttttagggacaaaaaaagtt 13391336  T
Q  273 gatcaannnnnnnnacaaggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||        |||| |||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  13391335 gatcaattttttttacaatgactaaaactggtaatgatttttctttacaaggactaaaaatattgacagaaaattttatagggactaaaaaatgtgattt 13391236  T
Q  373 tattttgtaggaaagatattatagatgtttgtaagaattat 413  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  13391235 tattttgtaggaaagatattatagatgtttgtaagaattat 13391195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 30004561 - 30004620
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||  ||||| |||||||||||||||||||||||||||| ||||||||    
T  30004561 gactaaaaatattgatggaaaattttatagggactaaaaaatgtgattttactttgtagg 30004620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 386
Target Start/End: Original strand, 10737777 - 10737847
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaaa 386  Q
    |||||| ||||||||||| ||||  ||||| ||| |||||||||||||||||||||||||||| |||||||    
T  10737777 tttacagggactaaaaatgttgatggaaaattttgtagggactaaaaaatgtgattttattttataggaaa 10737847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 21071568 - 21071499
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| ||||||||||||| |||||  |||| |||||||||| |||||| |||||||||||||||||||||    
T  21071568 tttataaggactaaaaatgttgacgaaaaattttatagggattaaaaagtgtgattttattttgtaggaa 21071499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 39084508 - 39084468
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  39084508 gaaaaatttatagggactaaaaaatgtgattttattttgta 39084468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 14311294 - 14311361
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  14311294 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 14311361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 35514858 - 35514800
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||| ||||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  35514858 actaaaaatgttgatggaaaattttatagggactaaaaaatatgattttattttgtagg 35514800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 36569720 - 36569659
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaa-tgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||||||||||||||| |||||||||||||||||||    
T  36569720 ggactaaaaatgttgatggaaaattttatagggactaaaaaagtgtgattttattttgtagg 36569659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 384
Target Start/End: Original strand, 7201036 - 7201104
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagga 384  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||| |||||    
T  7201036 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttatagga 7201104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 34578419 - 34578352
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||| ||||    
T  34578419 tttataaggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttatagg 34578352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 24802252 - 24802294
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  24802252 gaaaattttatagggactaaaaagtgtgattttattttgtagg 24802294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 25353725 - 25353767
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||||||| |||||||||||||||    
T  25353725 gaaaattttatagggactaaaaaatgtcattttattttgtagg 25353767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 30187816 - 30187774
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||||||||||||||||||||||||||||| ||||    
T  30187816 gaaaattttatagggactaaaaaatgtgattttattttatagg 30187774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 156207 - 156256
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  156207 ggactaaaaacattaacagaaaattttataggaactaaaaaatgtgattt 156256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 18076072 - 18076121
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  18076072 ggactaaaaacattaacagaaaattttataggaactaaaaaatgtgattt 18076121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 18279486 - 18279551
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| ||||||||||||| ||||  ||||| |||||| ||| |||||| |||||||||||||||||    
T  18279486 tttataaggactaaaaatgttgatggaaaattttataaggattaaaaagtgtgattttattttgta 18279551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 381
Target Start/End: Complemental strand, 28770685 - 28770628
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||    
T  28770685 gactaaaaatgatgatggaaaattttatagggactaaaaagtgtgattttattttgta 28770628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 378
Target Start/End: Complemental strand, 32701810 - 32701757
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||||| |||  ||||| ||||||| ||||||||||||||||||||||||    
T  32701810 actaaaaatactgatggaaaattttatagagactaaaaaatgtgattttatttt 32701757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 15916147 - 15916207
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||| ||||||||| |||||||||||||||||||    
T  15916147 ggactaaaaatggtgatggaaaattttatagagactaaaaagtgtgattttattttgtagg 15916207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 18730814 - 18730774
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||||||| ||||||||||||||||||    
T  18730814 aaaattttatagggactaaaaagtgtgattttattttgtag 18730774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 351 - 383
Target Start/End: Complemental strand, 19617994 - 19617962
Alignment:
Q  351 tagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||||||    
T  19617994 tagggactaaaaaatgtgattttattttgtagg 19617962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 21052475 - 21052535
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||| |||||||||| | |||||||||||||||||    
T  21052475 ggactaaaaatgttgatggaaaattttataaggactaaaaagtatgattttattttgtagg 21052535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 30239343 - 30239283
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||| |||||||||| | |||||||||||||||||    
T  30239343 ggactaaaaatgttgatggaaaattttataaggactaaaaagtatgattttattttgtagg 30239283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 309 - 383
Target Start/End: Original strand, 7949068 - 7949140
Alignment:
Q  309 atttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| |||||| |||||||||||  |||  ||||| ||||||||||||  ||| |||||||||||||||||||    
T  7949068 atttttttttacagggactaaaaatggtgatggaaaattttatagggact--aaagtgtgattttattttgtagg 7949140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 10862382 - 10862413
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  10862382 agggactaaaaaatgtgattttattttgtagg 10862413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Complemental strand, 14347122 - 14347091
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  14347122 agggactaaaaaatgtgattttattttgtagg 14347091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Complemental strand, 19618022 - 19617991
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  19618022 agggactaaaaaatgtgattttattttgtagg 19617991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 382
Target Start/End: Original strand, 33866731 - 33866766
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||||||| |||||||||||||||||||    
T  33866731 tttatagggactaaaagatgtgattttattttgtag 33866766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 348 - 383
Target Start/End: Complemental strand, 37109457 - 37109422
Alignment:
Q  348 ttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||| |||||||||||||||||||    
T  37109457 ttatagggactaaaaagtgtgattttattttgtagg 37109422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 41621486 - 41621427
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||  |||  ||||| ||||||||||||||||| | |||||||||||||||||    
T  41621486 gactaaaaatgctgatggaaaattttatagggactaaaaagtatgattttattttgtagg 41621427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 350
Target Start/End: Original strand, 1003288 - 1003322
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaattta 350  Q
    |||||||||||||||||| ||||||||||||||||    
T  1003288 tttacaaggactaaaaatgttgacagaaaaattta 1003322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 25947875 - 25947929
Alignment:
Q  327 taaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||| ||||  ||||| |||||| |||||||||||||| |||||||||||||    
T  25947875 taaaaatgttgagggaaaattttataaggactaaaaaatgtaattttattttgta 25947929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 33620017 - 33620083
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||| ||||   |||| ||||||| || |||||| ||||||||||||||||||    
T  33620017 tttataaggactaaaaatgttgatgaaaaattttatagagattaaaaagtgtgattttattttgtag 33620083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 6042385 - 6042352
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||| ||||||||||||||||||||||||||||    
T  6042385 agggattaaaaaatgtgattttattttgtaggaa 6042352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 6042730 - 6042771
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||| ||||    
T  6042730 aaaattttatagggactaaaaagtgtgattttattttatagg 6042771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 383
Target Start/End: Original strand, 12256375 - 12256408
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| |||||||||||||||||||    
T  12256375 atagggactaaaaattgtgattttattttgtagg 12256408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 383
Target Start/End: Original strand, 18279042 - 18279071
Alignment:
Q  354 ggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||    
T  18279042 ggactaaaaaatgtgattttattttgtagg 18279071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 18740256 - 18740203
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | |||||||| ||| ||||||||||||| ||||||||    
T  18740256 acaaggactaaaaacactaacagaaaattttgtagggactaaaaagtgtgattt 18740203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 19000800 - 19000849
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||| | || ||||| ||||||||||||||||| ||||||||    
T  19000800 ggactaaaaatactaacggaaaattttatagggactaaaaagtgtgattt 19000849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 19928731 - 19928784
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | || ||||| ||| ||||||||||||||||||||||    
T  19928731 acaaggactaaaaacactaacggaaaattttgtagggactaaaaaatgtgattt 19928784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 22981880 - 22981827
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| ||| || ||||| ||| ||||||||||||| ||||||||    
T  22981880 acaaggactaaaaacattaacggaaaattttgtagggactaaaaagtgtgattt 22981827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 34819452 - 34819501
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||||||| ||||||||||||| ||||||||    
T  34819452 ggactaaaaacactaacagaaaaatttgtagggactaaaaagtgtgattt 34819501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 2671150 - 2671186
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| | |||||||||||||||||    
T  2671150 tttatagggactaaaaagtatgattttattttgtagg 2671186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 4330081 - 4330137
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||||||||||||   ||| |||||||||| | |||||||||| ||||||||    
T  4330081 tttacaaggactaaaaatgccgacggaaaaatttacatggactaaaaagtgtgattt 4330137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Complemental strand, 5118490 - 5118462
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  5118490 gactaaaaaatgtgattttattttgtagg 5118462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 7401276 - 7401216
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||| ||||||||| ||||    
T  7401276 ggactaaaaatgctgatggaaaattttatagggactaaaaagtgtggttttattttatagg 7401216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 10862293 - 10862237
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttg 379  Q
    |||||||||||  |||  ||||| |||||||||||||||||  ||||||||||||||    
T  10862293 ggactaaaaatgctgatggaaaattttatagggactaaaaagcgtgattttattttg 10862237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 17639997 - 17639937
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||| |||||||| | |||||||||||||||||||    
T  17639997 ggactaaaaatgatgatggaaaattttataaggactaaatagtgtgattttattttgtagg 17639937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 18046594 - 18046534
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||   |||  |||||||  |||||||| |||||||||||||||||||    
T  18046594 ggactaaaaatattgatgaaaatttttatagaaactaaaaagtgtgattttattttgtagg 18046534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 20224895 - 20224931
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  20224895 tttataaggactaaaaaatgtgatgttattttgtagg 20224931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 383
Target Start/End: Complemental strand, 25908590 - 25908495
Alignment:
Q  287 acaaggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||| ||||   |  |||| || |||||||||| ||||  ||||| |||||| ||| |||||| | |||||||||||||||||    
T  25908590 acaaggactaaaaatgctgatgaaaatattttataaagactaaaaatgttgatggaaaattttata-ggaataaaaagtttgattttattttgtagg 25908495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Complemental strand, 25947779 - 25947751
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  25947779 gactaaaaaatgtgattttattttgtagg 25947751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 27189606 - 27189654
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  27189606 gactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattt 27189654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 27279839 - 27279803
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||  ||||||||||||||||||||||||||||    
T  27279839 tttatagaaactaaaaaatgtgattttattttgtagg 27279803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 39986109 - 39986149
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||||||| |||| ||||| |||||||||||||||||    
T  39986109 ggactaaaaatactgacggaaaattttatagggactaaaaa 39986149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 47; Significance: 1e-17; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 31857651 - 31857709
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||    
T  31857651 ggactaaaaatgttgatagaaaattttatagggactaaaaaatgtgattttattttgta 31857709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 321 - 383
Target Start/End: Original strand, 43977577 - 43977639
Alignment:
Q  321 aaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||| |||  | |||| |||||||||||||||||||||||||||||||||||||    
T  43977577 aaggactaaaaattttgctaaaaaattttatagggactaaaaaatgtgattttattttgtagg 43977639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 47764591 - 47764656
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| ||||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  47764591 tttataaggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgta 47764656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 38444548 - 38444457
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| ||||   || |||| ||||||||||||||||||  ||||| |||| |||||||||||| |||||||||||| ||||||    
T  38444548 ggactaaaaatgcttatgaaaatt-tttataaggactaaaaatattgatggaaaattttacagggactaaaaagtgtgattttattatgtagg 38444457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 40081832 - 40081892
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||||||||||||||||||||||||||||||||||    
T  40081832 ggactaaaaatgctgatggaaaattttatagggactaaaaaatgtgattttattttgtagg 40081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 27689439 - 27689372
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| |||||||||||  |||  ||||| |||||||| ||||||||||||||||||||||||||||    
T  27689439 tttacagggactaaaaatgctgatggaaaattttataggaactaaaaaatgtgattttattttgtagg 27689372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 383
Target Start/End: Complemental strand, 33253692 - 33253633
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||| ||||  ||||| ||||||||||||||||||||| |||||||||||||||    
T  33253692 gactaaaaatgttgatggaaaattttatagggactaaaaaatgtaattttattttgtagg 33253633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 37220330 - 37220397
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| ||||||||||||||||| ||||||||| |||||||||    
T  37220330 tttataaggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttcttttgtagg 37220397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 40934561 - 40934494
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||| ||||    
T  40934561 tttataaggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttatagg 40934494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 21993916 - 21993856
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| ||||||||| |||||||||    
T  21993916 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttcttttgtagg 21993856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 378
Target Start/End: Complemental strand, 8238746 - 8238691
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| ||||||||||||||    
T  8238746 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttatttt 8238691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 28387684 - 28387641
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagga 384  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||    
T  28387684 gaaaattttatagagactaaaaaatgtgattttattttgtagga 28387641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 37143224 - 37143157
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| |||||||||| |||||| |||||||||||||||||||    
T  37143224 tttataaggactaaaaatgttgatgaaaaattttatagggattaaaaagtgtgattttattttgtagg 37143157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 39535066 - 39535133
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| |||||||||| |||||| |||||||||||||||||||    
T  39535066 tttataaggactaaaaatgttgatgaaaaattttatagggattaaaaagtgtgattttattttgtagg 39535133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 291 - 378
Target Start/End: Complemental strand, 44158073 - 44157987
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||||||| | |||| |||| |||| | ||||||||||| ||||   |||  ||||||||||||||||||||||||||||||||    
T  44158073 ggactaaaaatgttgatgaatttt-tttatagggactaaaaatgttgatgaaaatttttatagggactaaaaaatgtgattttatttt 44157987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 381
Target Start/End: Complemental strand, 44887466 - 44887392
Alignment:
Q  306 atgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||| |||||| ||||||||| |  |||  ||||||||||||||||||||||| ||| |||||||||||||    
T  44887466 atgatttttttttacagggactaaaagtgctgatggaaaaatttatagggactaaaaagtgt-attttattttgta 44887392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 41541844 - 41541902
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| ||||||| ||||||||||| |||||||||||||||    
T  41541844 ggactaaaaatgttgatggaaaattttatagagactaaaaaatatgattttattttgta 41541902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 385
Target Start/End: Original strand, 19837580 - 19837672
Alignment:
Q  292 gactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||||||| ||||  ||| |||||| | |||||||||  | |  ||||| |||||| |||||||||| |||||||||||||||||||||    
T  19837580 gactaaaaatgctgatgaaatttttttacatg-actaaaaatgcttatggaaaattttataaggactaaaaagtgtgattttattttgtaggaa 19837672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 24424487 - 24424536
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||| ||||||||||||||||| ||||||||    
T  24424487 ggactaaaaacattaacagaaaattttatagggactaaaaagtgtgattt 24424536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 26626334 - 26626301
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||||||||||||||||||||||||||||    
T  26626334 agggactaaaaaatgtgattttattttgtaggaa 26626301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 2285530 - 2285590
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||| ||||    
T  2285530 ggactaaaaatgctgatggaaaattttatagggactaaaaattgtgattttattttttagg 2285590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 6669562 - 6669502
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  ||| |||||| ||| || |||||||||| |||||||||||||||||||    
T  6669562 ggactaaaaatgctgatagaaaattttctaaggactaaaaagtgtgattttattttgtagg 6669502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 11832176 - 11832216
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  11832176 gaaaattttatagggactaaaaaacgtgattttattttgta 11832216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 24838152 - 24838116
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  24838152 tttatagggactaaaaagtgtgattttattttgtagg 24838116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 30740239 - 30740183
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||| |||||||||||| | |||||||| ||| ||||||||||||| ||||||||    
T  30740239 tttacagggactaaaaatactaacagaaaattttgtagggactaaaaagtgtgattt 30740183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 48549698 - 48549734
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| |||||||||||||||||||||||||||||    
T  48549698 tttatagagactaaaaaatgtgattttattttgtagg 48549734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 48648047 - 48648107
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| || |  ||||| |||||| |||||||||| |||||||||||||||||||    
T  48648047 ggactaaaaatgttaatggaaaattttataaggactaaaaagtgtgattttattttgtagg 48648107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 48698306 - 48698342
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48698306 tttatagggactaaaaagtgtgattttattttgtagg 48698342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 382
Target Start/End: Original strand, 8898258 - 8898293
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||| |||||||||||||||||||||||||||||    
T  8898258 tttataaggactaaaaaatgtgattttattttgtag 8898293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 19532538 - 19532471
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||| ||||  |||  ||||| ||||||||||||||||| | |||||||||||||||||    
T  19532538 tttataaggactacaaatggtgatggaaaattttatagggactaaaaagtatgattttattttgtagg 19532471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 23561119 - 23561150
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  23561119 agggactaaaaaatgtgattttattttgtagg 23561150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 37331186 - 37331119
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||  |||   |||| ||||||| ||||||||| |||||||||||||||||||    
T  37331186 tttataaggactaaaaatgctgatgaaaaattttatagagactaaaaagtgtgattttattttgtagg 37331119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 38443027 - 38442972
Alignment:
Q  327 taaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||||    
T  38443027 taaaaatgttgatggaaaattttataaggactaaaaattgtgattttattttgtag 38442972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 37105163 - 37105205
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||||||| |||||| |||||||||||||||||||    
T  37105163 gaaaattttatagggattaaaaagtgtgattttattttgtagg 37105205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 40619789 - 40619731
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||  ||| | |||| ||||||||||||||||| ||| |||||||||||||||    
T  40619789 actaaaaatgctgataaaaaattttatagggactaaaaagtgtaattttattttgtagg 40619731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 41492427 - 41492385
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||| |||||||||||||| ||||    
T  41492427 gaaaattttatagggactaaaaagtgtgattttattttttagg 41492385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 11749837 - 11749878
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||| |||||||| ||||||||||||||||||||    
T  11749837 aaaattttatagagactaaaatatgtgattttattttgtagg 11749878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 26626416 - 26626485
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| ||||||||||||| ||||  ||||| ||||||  || |||||| ||| |||||||||||||||||    
T  26626416 tttataaggactaaaaatgttgatggaaaattttataaagattaaaaagtgtaattttattttgtaggaa 26626485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 28643021 - 28643070
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| ||||||||||||||||| ||||||||    
T  28643021 ggactaaaaacactaacagaaaattttatagggactaaaaagtgtgattt 28643070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 8761222 - 8761182
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||||||  ||||||||||||||||||    
T  8761222 aaaattttatagggactaaaacgtgtgattttattttgtag 8761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 383
Target Start/End: Original strand, 22745185 - 22745277
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||     |||||| |||||||||||  |||  ||||| ||||||  ||||||||| | |||||||||||| ||||    
T  22745185 ggactaaaaatgctaatgataaaattttacagggactaaaaatgctgatggaaaattttataaagactaaaaagtttgattttattttatagg 22745277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 23561030 - 23560970
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| | |||||||||||| ||||    
T  23561030 ggactaaaaatgctgattgaaaattttatagggactaaaaagtatgattttattttttagg 23560970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 25846874 - 25846933
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||||||| |||||| || ||||||||||||||||    
T  25846874 ggactaaaaatgttgatggaaaattttatagggattaaaaagtg-gattttattttgtagg 25846933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 30071855 - 30071899
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||| ||||||||||||||||| ||| |||||||||| ||||||    
T  30071855 gaaaattttatagggactaaaaagtgttattttattttataggaa 30071899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 33258361 - 33258329
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagga 384  Q
    |||||||||||| ||||||||||||||||||||    
T  33258361 agggactaaaaagtgtgattttattttgtagga 33258329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 7e-16; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 36157370 - 36157303
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  36157370 tttataaggactaaaaatgttgatggaaaattttatagggactaaaaaatatgattttattttgtagg 36157303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 49487893 - 49487826
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| ||||||||||||||||||||||||||||||    
T  49487893 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaaatgtgattttattttgtagg 49487826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 32319608 - 32319548
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||||||||| ||||||||||||||||| |||||||||||||| ||||    
T  32319608 ggactaaaaatgctgacagaaaattttatagggactaaaaagtgtgattttattttatagg 32319548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 35910932 - 35910992
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||| |||   |||| |||||||||||||||||||||||||||||||||||||    
T  35910932 ggactaaaaatactgatgtaaaattttatagggactaaaaaatgtgattttattttgtagg 35910992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 13128617 - 13128676
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  13128617 gactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 13128676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 3060459 - 3060399
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  3060459 ggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 3060399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 8562814 - 8562878
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||    
T  8562814 tttataaggactaaaaattttgatggaaaattttataaggactaaaaagtgtgattttattttgt 8562878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 16833394 - 16833454
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||   ||||||||||| |||||||||| |||||||||||||||||||    
T  16833394 ggactaaaaatgttgattaaaaaatttatatggactaaaaagtgtgattttattttgtagg 16833454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 22638150 - 22638090
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  22638150 ggacaaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 22638090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 23719303 - 23719363
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  ||| |||||| ||||||| |||||||||||||||||||||||| ||||    
T  23719303 ggactaaaaatgctgatagaaaattttatagagactaaaaaatgtgattttattttatagg 23719363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 27579327 - 27579267
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  27579327 ggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 27579267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 48148876 - 48148816
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||| | ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  48148876 ggactaaaactgttgatggaaaattttatagggactaaaaactgtgattttattttgtagg 48148816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 52822923 - 52822875
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  52822923 gactaaaaatattaacagaaaaatttttagggactaaaaagtgtgattt 52822875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 8459509 - 8459576
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||  |||  |||||  |||||||||||||||| |||||||||||||||||||    
T  8459509 tttataaggactaaaaatgctgatggaaaatcttatagggactaaaaagtgtgattttattttgtagg 8459576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 16069627 - 16069568
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||||||| ||||   |||| ||||||||||||||||| ||||||||||||||||||    
T  16069627 ggactaaaaattttgatgaaaaattttatagggactaaaaagtgtgattttattttgtag 16069568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 17534341 - 17534396
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||||||  |||  ||||| ||||||||||||||||||||||||||||||||    
T  17534341 ggactaaaaatgctgatggaaaattttatagggactaaaaaatgtgattttatttt 17534396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 23257076 - 23257009
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||| ||||    
T  23257076 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttttagg 23257009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 27704669 - 27704736
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||| ||||    
T  27704669 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttttagg 27704736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 1842589 - 1842647
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| || |  ||||| ||||||||||||||||| |||||||||||||||||    
T  1842589 ggactaaaaattttaatggaaaattttatagggactaaaaagtgtgattttattttgta 1842647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 43700523 - 43700461
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||| ||||||||||||| ||||  ||||| |||||| ||| |||||||||||||||||||||    
T  43700523 tttataaggactaaaaatgttgatggaaaattttataaggattaaaaaatgtgattttatttt 43700461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 6121318 - 6121378
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  || || |||||||||| |||||| |||||||||||||||||||    
T  6121318 ggactaaaaatgttgatggagaattttatagggattaaaaagtgtgattttattttgtagg 6121378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 7603992 - 7604056
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||| | ||||||||||||||||    
T  7603992 tttataaggactaaaaatgttgaaggaaaattttataaggactaaagagtgtgattttattttgt 7604056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 354 - 386
Target Start/End: Original strand, 25298421 - 25298453
Alignment:
Q  354 ggactaaaaaatgtgattttattttgtaggaaa 386  Q
    |||||||||||||||||||||||||||||||||    
T  25298421 ggactaaaaaatgtgattttattttgtaggaaa 25298453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 28541397 - 28541445
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  28541397 gactaaaaacactaacagaaaaatttatagggactaaaaagtgtgattt 28541445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 33122536 - 33122476
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| ||| |||||||||||||||    
T  33122536 ggactaaaaatgctgatggaaaattttatagggactaaaaagtgtaattttattttgtagg 33122476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 36230075 - 36230007
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaattt-atagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||| ||||||||||||  ||||| ||| |||||||||||||| ||| |||||||||||||||    
T  36230075 tttataaggattaaaaatattgatggaaaatttttatagggactaaaaagtgtaattttattttgtagg 36230007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 44801850 - 44801814
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44801850 tttatagggactaaaaaatatgattttattttgtagg 44801814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 6840987 - 6841018
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  6840987 agggactaaaaaatgtgattttattttgtagg 6841018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 383
Target Start/End: Complemental strand, 11997487 - 11997444
Alignment:
Q  340 agaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||    
T  11997487 agaaaactttatagggactaaaaagtgtgattttattttatagg 11997444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 33181629 - 33181562
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| |||||| |||  |||  ||||| ||||||||||||||||| |||||||||||||| ||||    
T  33181629 tttacaatgactaacaatgctgatggaaaattttatagggactaaaaagtgtgattttattttttagg 33181562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 33230362 - 33230429
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| |||||| |||  |||  ||||| ||||||||||||||||| |||||||||||||| ||||    
T  33230362 tttacaatgactaataatgctgatggaaaattttatagggactaaaaagtgtgattttattttttagg 33230429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 34321133 - 34321066
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| |||||||||||  |||  ||||| |||||||||  |||||| |||||||||||||||||||    
T  34321133 tttacagggactaaaaatgctgatggaaaattttataggggttaaaaagtgtgattttattttgtagg 34321066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 381
Target Start/End: Original strand, 41376479 - 41376510
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||||||||||||||||||||||||    
T  41376479 atagggactaaaaaatgtgattttattttgta 41376510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 44258901 - 44258932
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  44258901 agggactaaaaaatgtgattttattttgtagg 44258932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 51948167 - 51948128
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  51948167 aaaattttataaggactaaaaaatgtgattttattttgta 51948128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 12919463 - 12919504
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||||||||||||| ||||||||||||||||||||    
T  12919463 gaaaattttatagggactaaaa-atgtgattttattttgtagg 12919504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 15639098 - 15639056
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||| |||||||||| |||||||||||||||||||    
T  15639098 gaaaattttataaggactaaaaagtgtgattttattttgtagg 15639056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 26629543 - 26629485
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||  |||| ||||| || | |||||||||||| |||||||||||||||||||    
T  26629543 actaaaaatgctgacggaaaatttcacagggactaaaaagtgtgattttattttgtagg 26629485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 383
Target Start/End: Original strand, 6452204 - 6452233
Alignment:
Q  354 ggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||    
T  6452204 ggactaaaaaatgtgattttattttgtagg 6452233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 10386906 - 10386959
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | || ||||| ||||||||||||||||| ||||||||    
T  10386906 acaaggactaaaaacactaacggaaaattttatagggactaaaaagtgtgattt 10386959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 10502318 - 10502359
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||| ||||||||||||| |||||||||||||||||||    
T  10502318 aaaattttctagggactaaaaagtgtgattttattttgtagg 10502359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 12886515 - 12886474
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||||||||  ||||||||||||||||    
T  12886515 aaaattttatagggactaaaaaatacgattttattttgtagg 12886474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 24281435 - 24281386
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | ||||||| |||| ||||||||||||||||||||||    
T  24281435 ggactaaaaacactaacagaaatatttgtagggactaaaaaatgtgattt 24281386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 28540749 - 28540700
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | || ||||||||| ||||||||||||||||||||||    
T  28540749 ggactaaaaacactaacggaaaaatttgtagggactaaaaaatgtgattt 28540700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 28756853 - 28756906
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | |||||||| ||| ||||||||||||| ||||||||    
T  28756853 acaaggactaaaaacactaacagaaaattttgtagggactaaaaagtgtgattt 28756906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 39788787 - 39788734
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||| ||||| | | || ||||| ||||||||||||||||||||||||||    
T  39788787 acaaggacgaaaaacactaacggaaaattttatagggactaaaaaatgtgattt 39788734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 44723804 - 44723845
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||| | ||||||||||||||||||||| ||||    
T  44723804 aaaaatttataggaaataaaaaatgtgattttattttttagg 44723845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 52225113 - 52225162
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | ||| |||| ||||||||||||||||||||||||||    
T  52225113 ggactaaaaacactaacaaaaaattttatagggactaaaaaatgtgattt 52225162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 53850015 - 53850080
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| |||||||| ||||  |||  ||||| ||||||||||||||||| | |||||||||||||||    
T  53850015 tttataaggactacaaatggtgatggaaaattttatagggactaaaaagtatgattttattttgta 53850080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 55935505 - 55935558
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||| ||||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  55935505 acaacgactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattt 55935558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 8168759 - 8168799
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    ||||||||||| ||||| ||||| |||||||||||||||||    
T  8168759 ggactaaaaatgttgacggaaaattttatagggactaaaaa 8168799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 10590717 - 10590657
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||| ||||| |||| |||||||||||||||||||    
T  10590717 ggactaaaaatgatgatggaaaattttataaggacttaaaagtgtgattttattttgtagg 10590657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 23625025 - 23625073
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| | | |||||||| ||| ||||||||||||||||||||||    
T  23625025 gactaaaaacactaacagaaaattttgtagggactaaaaaatgtgattt 23625073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 29520605 - 29520565
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||||||  |||||||||| |||||||||||||||||    
T  29520605 ggactaaaaatgctgacagaaaattttatagggactaaaaa 29520565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 37133413 - 37133449
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  37133413 tttatagagactaaaaagtgtgattttattttgtagg 37133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 45918404 - 45918364
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||||||| ||| ||||||||||||||    
T  45918404 aaaattttatagggactaaaaagtgtaattttattttgtag 45918364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 53512 - 53581
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||||||||||||||| ||||  ||||||||| ||||||| ||  |||||||||||||||||    
T  53512 tttacaaggactaaaaatattgacggaaacttttataggggctaaaaagtgcaattttattttgtaggaa 53581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 35065654 - 35065564
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| ||||  |||  ||| ||||||||||||| ||||   |||| ||||||||||||||||| |||||||||||||||||||    
T  35065654 ggactaaaaatgctgatgaaattt--ttataaggactaaaaatgttgatgaaaaattttatagggactaaaaagtgtgattttattttgtagg 35065564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 7057361 - 7057421
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  7057361 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 7057421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 28237399 - 28237339
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  28237399 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 28237339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 33744370 - 33744436
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  33744370 tttataaggactaaaaatgttgat-gaaaattttatagggactaaaaagtgtgattttattttgtagg 33744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 1430576 - 1430518
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||   |||| |||||||||||||||||||||||||||||||||||    
T  1430576 ggactaaaaatgttgatgaaaaattttatagggactaaaaaatgtgattttattttgta 1430518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 13155536 - 13155470
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||||    
T  13155536 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtag 13155470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 10579173 - 10579082
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| ||||   || |||| ||||||||||||| ||||   |||| |||||||||| |||||| |||||||||||||||||||    
T  10579173 ggactaaaaatgcttatgaaaatt-tttataaggactaaaaatgttgatgaaaaattttatagggattaaaaagtgtgattttattttgtagg 10579082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 32723325 - 32723281
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||||| |||||||| |||||||||||||||||||||    
T  32723325 gaaaaatttataggaactaaaaagtgtgattttattttgtaggaa 32723281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 34214674 - 34214738
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| |||||||||||||  |||  ||||| ||||||||||||||||| ||||||||||||||||    
T  34214674 tttataaggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgt 34214738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 4718144 - 4718211
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| |||||||||||  |||  ||||| |||||||| |||||||| |||||||||||||||||||    
T  4718144 tttacagggactaaaaatgctgatggaaaattttataggaactaaaaagtgtgattttattttgtagg 4718211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 8082674 - 8082741
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| |||||||||| |||||| |||||||||||||||||||    
T  8082674 tttataaggactaaaaatgttgatgaaaaattttatagggattaaaaagtgtgattttattttgtagg 8082741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 10167670 - 10167737
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||| ||||    
T  10167670 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttttagg 10167737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 11140818 - 11140885
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| ||| |||||| |||||||||||||||||||    
T  11140818 tttataaggactaaaaatgttgatggaaaattttataaggattaaaaagtgtgattttattttgtagg 11140885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 15287333 - 15287400
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||  ||||   |||| ||||||||||||||||||||| |||||||||||||||    
T  15287333 tttataaggactaaaaaggttgatgaaaaattttatagggactaaaaaatgtaattttattttgtagg 15287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 15467702 - 15467769
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||  ||||   |||| ||||||||||||||||||||| |||||||||||||||    
T  15467702 tttataaggactaaaaaggttgatgaaaaattttatagggactaaaaaatgtaattttattttgtagg 15467769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 385
Target Start/End: Complemental strand, 32974874 - 32974831
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| |||||| ||||||||||||||||||||||||||||||||    
T  32974874 aaaattttatacggactaaaaaatgtgattttattttgtaggaa 32974831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 290553 - 290595
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||| |||||||||||||| ||||    
T  290553 gaaaaatttatagggactaaaaagtgtgattttattttatagg 290595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 10675532 - 10675590
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| |||||||| |||||||| |||||||||||||||||    
T  10675532 ggactaaaaatgttgatggaaaattttataggaactaaaaagtgtgattttattttgta 10675590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 42217313 - 42217379
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||||||||   |||| |||||||||| |||||| | ||||||||||||||||    
T  42217313 tttataaggactaaaaatattgatgaaaaattttatagggattaaaaagtatgattttattttgtag 42217379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 15104941 - 15104877
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| ||||||||||||| ||||  ||||||||| |||||| |||||| |||||||||||||||||    
T  15104941 tttataaggactaaaaatgttgat-gaaaaatttttagggattaaaaagtgtgattttattttgta 15104877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 32374886 - 32374825
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagga 384  Q
    |||||||||||  |||  ||||| |||||||| |||||||| ||||||||||||||||||||    
T  32374886 ggactaaaaatgctgatggaaaattttataggaactaaaaagtgtgattttattttgtagga 32374825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 38442525 - 38442484
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  38442525 aaaattttatagggactaaaaagtgtgattttattttgtagg 38442484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 4017591 - 4017555
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||| |||||||||||||||    
T  4017591 tttatagggactaaaaaatgtaattttattttgtagg 4017555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 24685365 - 24685309
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||| |||||||||||||| || ||||| ||| ||||||||||||| ||||||||    
T  24685365 tttacagggactaaaaatattaacggaaaattttgtagggactaaaaagtgtgattt 24685309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 32723812 - 32723752
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  32723812 ggactaaaaattctgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 32723752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 41258902 - 41258962
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||||| | |||||| |||||||||||||||||||    
T  41258902 ggactaaaaatgttgatggaaaattttataggaattaaaaagtgtgattttattttgtagg 41258962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 41738830 - 41738870
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  41738830 ggactaaaaatgctgacagaaaaatttatagggactaaaaa 41738870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 4017704 - 4017735
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  4017704 agggactaaaaaatgtgattttattttgtagg 4017735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 385
Target Start/End: Original strand, 35731448 - 35731491
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| |||||| | ||||||||||||||||||||||||||||||    
T  35731448 aaaattttatatgaactaaaaaatgtgattttattttgtaggaa 35731491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 37438677 - 37438708
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  37438677 agggactaaaaaatgtgattttattttgtagg 37438708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 45184120 - 45184061
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||| |||||||||||||    
T  45184120 ggactaaaaatgctgatcgaaaattttatagggactaaaaagtgtgtttttattttgtag 45184061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 385
Target Start/End: Original strand, 15890206 - 15890268
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||  |||  ||||| |||||||| ||| |||||| |||||||||||||||||||    
T  15890206 ggactaaaaatgctgatggaaaattttataggaactgaaaaatatgattttattttgtaggaa 15890268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 349 - 382
Target Start/End: Original strand, 3530626 - 3530659
Alignment:
Q  349 tatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||||||||||| ||||||||||||||||||    
T  3530626 tatagggactaaaaagtgtgattttattttgtag 3530659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 4137543 - 4137592
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| ||||||| ||||||||||||||||||    
T  4137543 ggactaaaaacactaacagaaaattttatagagactaaaaaatgtgattt 4137592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 7636662 - 7636613
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| ||| ||||||||||||||||||||||    
T  7636662 ggactaaaaacactaacagaaaattttgtagggactaaaaaatgtgattt 7636613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 11386100 - 11386149
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||||  || |||||||||||| ||||||||||||| ||||||||    
T  11386100 ggactaaaaactttaacagaaaaatttgtagggactaaaaagtgtgattt 11386149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Original strand, 15189399 - 15189432
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| |||||||||||||||||||||    
T  15189399 agggactaaaaagtgtgattttattttgtaggaa 15189432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 16355956 - 16355903
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | |||||||| ||| ||||||||||||| ||||||||    
T  16355956 acaaggactaaaaacactaacagaaaattttgtagggactaaaaagtgtgattt 16355903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 32099303 - 32099352
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| ||| ||||||||||||||||||||||    
T  32099303 ggactaaaaacactaacagaaaattttgtagggactaaaaaatgtgattt 32099352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 32974124 - 32974091
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| |||||||||||||||||||||    
T  32974124 agggactaaaaagtgtgattttattttgtaggaa 32974091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 378
Target Start/End: Complemental strand, 14913523 - 14913483
Alignment:
Q  338 acagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||| ||||||||||||||||| |||||||| |||||    
T  14913523 acagaaaattttatagggactaaaaagtgtgatttaatttt 14913483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 19182512 - 19182464
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| | | |||||||| ||||||||||||||||| ||||||||    
T  19182512 gactaaaaacactaacagaaaattttatagggactaaaaagtgtgattt 19182464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 32974231 - 32974271
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||| |||||||| |||||||||| |||||||||||||||    
T  32974231 gaaaattttataggaactaaaaaatatgattttattttgta 32974271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Original strand, 42174663 - 42174711
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  42174663 gactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattt 42174711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 351 - 383
Target Start/End: Original strand, 43165749 - 43165781
Alignment:
Q  351 tagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||| |||||||||||||||||||    
T  43165749 tagggactaaaaagtgtgattttattttgtagg 43165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 380
Target Start/End: Complemental strand, 22091 - 22027
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||||||||||||||||||||    
T  22091 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaaatgtgattttattttgt 22027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 12145488 - 12145548
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  12145488 ggactaaaaatgttgatggaaaattttatagggactaaaaaatatgattttattttgtagg 12145548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 31842569 - 31842509
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| |||| |||||| ||||||||||||||||| || ||||||||||||||||    
T  31842569 ggactaaaaatgttgatagaaaattttatagggactaaaaagtgcgattttattttgtagg 31842509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 1131088 - 1131021
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  1131088 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 1131021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 7621112 - 7621179
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  7621112 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 7621179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 9242496 - 9242429
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  |||||  |||||||||||||||| |||||||||||||||||||    
T  9242496 tttataaggactaaaaatgttgatggaaaatgttatagggactaaaaagtgtgattttattttgtagg 9242429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 385
Target Start/End: Original strand, 16539421 - 16539490
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| ||| ||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||||    
T  16539421 tttataagaactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtaggaa 16539490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 12757355 - 12757288
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||  |||  ||||| ||||||||||||| ||| |||||||||||||||||||    
T  12757355 tttataaggactaaaaatgctgatggaaaattttatagggactagaaagtgtgattttattttgtagg 12757288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 32603389 - 32603322
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| |||||||| || ||||  ||||| |||  ||||||||||||||||||||||||||||||||    
T  32603389 tttacagggactaaagatgttgatggaaaattttgcagggactaaaaaatgtgattttattttgtagg 32603322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 6153863 - 6153797
Alignment:
Q  317 ttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| ||||  ||||| |||||| |||||||||| || ||||||||||| ||||    
T  6153863 ttacaaggactaaaaatgttgatggaaaattttataaggactaaaaagtgcgattttattttatagg 6153797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 14863907 - 14863849
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| | |||||||||||||||    
T  14863907 ggactaaaaatgttgatggaaaattttatagggactaaaaagtatgattttattttgta 14863849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 385
Target Start/End: Complemental strand, 11989932 - 11989839
Alignment:
Q  292 gactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||||| | ||||||||| |||| | |||||||||||   ||| ||||| | |||| |||||||||  ||| |||||||||||||||||    
T  11989932 gactaaaaatgatgatgatttttttttatagggactaaaaattaagacggaaaattatataaggactaaaatgtgtaattttattttgtaggaa 11989839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 20680671 - 20680731
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  ||| |||||| |||||||| |||||||| | |||||||||||||||||    
T  20680671 ggactaaaaatgctgatagaaaattttataggaactaaaaagtttgattttattttgtagg 20680731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 22787311 - 22787251
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| | ||  ||||| ||||||||||||||||||| |||||||||||| ||||    
T  22787311 ggactaaaaatgtggatggaaaattttatagggactaaaaaatatgattttattttatagg 22787251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 29758511 - 29758571
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||| |||||||||| ||||| |||||||||||||    
T  29758511 ggactaaaaatgttgatggaaaattttatacggactaaaaagtgtgactttattttgtagg 29758571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 5385446 - 5385513
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| || |  ||||| |||||| |||||||||| |||||||||||||| ||||    
T  5385446 tttataaggactaaaaatgttaaaggaaaattttataaggactaaaaagtgtgattttattttatagg 5385513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 12693388 - 12693349
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| ||||||||||||||||| |||||||||||||||||    
T  12693388 aaaattttatagggactaaaaagtgtgattttattttgta 12693349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Complemental strand, 15837480 - 15837449
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  15837480 agggactaaaaaatgtgattttattttgtagg 15837449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 15837570 - 15837625
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    ||||||||||| ||||   |||| ||||||||||||||||| ||||||||||||||    
T  15837570 ggactaaaaatgttgatgaaaaattttatagggactaaaaagtgtgattttatttt 15837625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 17205190 - 17205221
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  17205190 agggactaaaaaatgtgattttattttgtagg 17205221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 4058952 - 4058910
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  4058952 gaaaattttaaagggactaaaaagtgtgattttattttgtagg 4058910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 13685573 - 13685531
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||| |||||||||||| |||||||||||||||||||    
T  13685573 gaaaattttacagggactaaaaagtgtgattttattttgtagg 13685531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 382
Target Start/End: Original strand, 27771878 - 27771908
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||||||||||||||||||||||    
T  27771878 agggactaaaaaatgtgattttattttgtag 27771908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 30579358 - 30579325
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| |||||||||||||||||||||    
T  30579358 agggactaaaaagtgtgattttattttgtaggaa 30579325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 357 - 385
Target Start/End: Original strand, 3992548 - 3992576
Alignment:
Q  357 ctaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||||||||||||||||||||    
T  3992548 ctaaaaaatgtgattttattttgtaggaa 3992576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 6366637 - 6366673
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  6366637 tttatagagactaaaaagtgtgattttattttgtagg 6366673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 10118022 - 10117931
Alignment:
Q  287 acaaggactaaaaatgctaatgatttttctttacaaggactaaaaa-tattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    ||||||| |||||||||| |||| |||| |||||| |||| ||||| | ||||| ||||| |||| | |||||||||| || |||||||||||    
T  10118022 acaaggattaaaaatgctgatgaatttt-tttacagggacaaaaaaatgttgacggaaaattttacaaggactaaaaagtgcgattttatttt 10117931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 380
Target Start/End: Original strand, 14657362 - 14657418
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    ||||||||||  |||  ||||| ||||||||||||| ||| ||||||||||||||||    
T  14657362 gactaaaaatgctgatggaaaattttatagggactagaaagtgtgattttattttgt 14657418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Original strand, 18030850 - 18030878
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  18030850 gactaaaaaatgtgattttattttgtagg 18030878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 30579471 - 30579507
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| | |||||||||||||||||    
T  30579471 tttatagggactaaaaagtatgattttattttgtagg 30579507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 363
Target Start/End: Complemental strand, 32462294 - 32462222
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    ||||||||| || | ||||  ||| |||||| ||||||||| || |||  |||||||||||||||||||||||    
T  32462294 ggactaaaactgttgatgaaatttttttacagggactaaaagtactgatggaaaaatttatagggactaaaaa 32462222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 34556504 - 34556413
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| ||||  ||| |||||||||||||||||| |||||| || | |||| |||||| | ||| || ||||| ||||| ||||    
T  34556504 ggactaaaaatgctgatgaaattt-tttacaaggactaaaaatgttgacataatattttacagggaccataaagtgcgatttcattttatagg 34556413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 34785078 - 34785138
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  34785078 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 34785138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 38945031 - 38944971
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  38945031 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 38944971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 45954058 - 45953966
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||| ||| |||| | ||||| |||||  |||  ||||| |||||| |||||||||| |||||||||||||| ||||    
T  45954058 ggactaaaaatgctaatgatatttttttatagggactgaaaatgctgatggaaaattttataaggactaaaaagtgtgattttattttatagg 45953966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 4183247 - 4183180
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| |||||| ||||||||||||||||||||||||||||||    
T  4183247 tttataaggactaaaaatgttgatgaaaaattttataaggactaaaaaatgtgattttattttgtagg 4183180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 7014351 - 7014418
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||||| |||||||| |||||||||||||||||||    
T  7014351 tttataaggactaaaaatgttgatggaaaattttataggaactaaaaagtgtgattttattttgtagg 7014418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 11935894 - 11935827
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  11935894 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 11935827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 29359201 - 29359259
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  29359201 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgta 29359259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 54767807 - 54767865
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  54767807 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgta 54767865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 17605142 - 17605202
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  17605142 ggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 17605202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 34784671 - 34784731
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  34784671 ggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 34784731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 46175694 - 46175634
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  46175694 ggactaaaaatgctgatggaaaattttatagggactaaaaaatatgattttattttgtagg 46175634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 49029529 - 49029493
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||||||||||    
T  49029529 tttatagggactaaaaaatgtgattttattttgtagg 49029493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 15444931 - 15444998
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||| ||||  |||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  15444931 tttataaggactacaaatggtgatggaaaattttatagggactaaaaaatatgattttattttgtagg 15444998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 27814425 - 27814379
Alignment:
Q  340 agaaaaat-ttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  27814425 agaaaaatgttacagggactaaaaaatgtgattttattttgtaggaa 27814379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 46799452 - 46799394
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||    
T  46799452 ggactaaaaatgttgatggaaaattttatatggactaaaaagtgtgattttattttgta 46799394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 49422389 - 49422347
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||| ||||||||||||||||||||||||||||||    
T  49422389 gaaaattttataaggactaaaaaatgtgattttattttgtagg 49422347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 33479373 - 33479414
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  33479373 aaaattttatagggactaaaaagtgtgattttattttgtagg 33479414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 45693002 - 45692961
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  45693002 aaaattttatagggactaaaaagtgtgattttattttgtagg 45692961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 45753852 - 45753791
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||||||  ||||| |||||| ||| |||||| ||||||||||||||| |||||    
T  45753852 gactaaaaatattgatggaaaattttataaggattaaaaagtgtgattttattttgcaggaa 45753791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 2008777 - 2008813
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  2008777 tttatagggactaaaaagtgtgattttattttgtagg 2008813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 381
Target Start/End: Original strand, 11194791 - 11194831
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||| ||||||||||||||||| |||||||||||||||||    
T  11194791 gaaaattttatagggactaaaaagtgtgattttattttgta 11194831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 29843749 - 29843689
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||| ||||  ||||| ||||||||||||||||| | |||||||||||||||||    
T  29843749 ggaccaaaaatgttgatggaaaattttatagggactaaaaagtatgattttattttgtagg 29843689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 31270988 - 31271048
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||||| |||||||| |||||||||||||||||||    
T  31270988 ggactaaaaatgctgatggaaaattttataggaactaaaaagtgtgattttattttgtagg 31271048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 31798163 - 31798127
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  31798163 tttatagggactaaaaagtgtgattttattttgtagg 31798127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 41752602 - 41752542
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||| || |||||| |||||||||||||||||||    
T  41752602 ggactaaaaatgttgatggaaaattttatagagattaaaaagtgtgattttattttgtagg 41752542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 348 - 384
Target Start/End: Complemental strand, 45394249 - 45394213
Alignment:
Q  348 ttatagggactaaaaaatgtgattttattttgtagga 384  Q
    ||||||||||||||||||||||| |||||||||||||    
T  45394249 ttatagggactaaaaaatgtgatgttattttgtagga 45394213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 347 - 382
Target Start/End: Original strand, 7758569 - 7758604
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||||||||||||||| ||||||||||||||||    
T  7758569 tttatagggactaaaaaatatgattttattttgtag 7758604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 377
Target Start/End: Complemental strand, 20221944 - 20221909
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattt 377  Q
    |||| |||||||||||||||||||||||||||||||    
T  20221944 aaaattttatagggactaaaaaatgtgattttattt 20221909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 28541054 - 28540999
Alignment:
Q  328 aaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||| ||||  ||||| ||||||||||||||||| | |||||||||||||||||    
T  28541054 aaaaatgttgatggaaaattttatagggactaaaaagtatgattttattttgtagg 28540999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 31410665 - 31410598
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| ||||||||||||||||| | | |||||||||||||||    
T  31410665 tttataaggactaaaaatgttgatgaaaaattttatagggactaaaaagtataattttattttgtagg 31410598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 40593729 - 40593662
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||  ||||||||||||||||| |||||||||||||| ||||    
T  40593729 tttataaggactaaaaatgttgatgaaaatttttatagggactaaaaagtgtgattttattttatagg 40593662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Complemental strand, 43563621 - 43563590
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  43563621 agggactaaaaaatgtgattttattttgtagg 43563590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 382
Target Start/End: Original strand, 55453785 - 55453844
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||||| | ||||  ||||||||||||||||||||||| |||  |||||||||||||    
T  55453785 ggactaaaagtgttgatggaaaaatttatagggactaaaaagtgtagttttattttgtag 55453844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 382
Target Start/End: Original strand, 11691787 - 11691817
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||||||||||||||||||||||    
T  11691787 agggactaaaaaatgtgattttattttgtag 11691817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 36710985 - 36711043
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||||  ||| |||||| |||||||||  |||||||||| |||||||||||||    
T  36710985 ggactaaaaatgctgatagaaaattttatagggtttaaaaaatgtaattttattttgta 36711043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 323 - 385
Target Start/End: Complemental strand, 48585761 - 48585699
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||| | | || ||||| ||| ||||||||||||||||||||||  |||||||||||    
T  48585761 ggactaaaaacactaacggaaaattttgtagggactaaaaaatgtgatttatttttgtaggaa 48585699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 291 - 381
Target Start/End: Complemental strand, 52313305 - 52313215
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||||||| ||||  | | |||||| ||||||||||| ||||   |||  ||||||| ||||||||| |||||| ||||||||||    
T  52313305 ggactaaaaatgctgatgaaatatttttacagggactaaaaatgttgatgaaaatttttatagagactaaaaagtgtgatattattttgta 52313215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 1487485 - 1487534
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||||||| ||||||||||||| ||||||||    
T  1487485 ggactaaaaacactaacagaaaaatttgtagggactaaaaagtgtgattt 1487534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 385
Target Start/End: Complemental strand, 33390595 - 33390534
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||| ||| |||||||| ||| ||||||||||||| ||||||||  |||| ||||||    
T  33390595 gactaaaaacattaacagaaaattttgtagggactaaaaattgtgatttatttttataggaa 33390534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 51368021 - 51367972
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| |||||| |||||||||||||||||||    
T  51368021 ggactaaaaacactaacagaaaattttataaggactaaaaaatgtgattt 51367972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 53947774 - 53947823
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| |||||||| ||| ||| ||||||||| ||||||||    
T  53947774 ggactaaaaatattaacagaaaattttgtagagactaaaaagtgtgattt 53947823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 381
Target Start/End: Complemental strand, 24681551 - 24681495
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||| |||  ||||| ||||||| ||||||||| | |||||||||||||||    
T  24681551 actaaaaatactgatggaaaattttatagagactaaaaagtatgattttattttgta 24681495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 378
Target Start/End: Original strand, 35546789 - 35546825
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  35546789 aaaattttatagggactaaaaaatgtaattttatttt 35546825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 41309513 - 41309453
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||  ||||||||| | |||||||||||||||||    
T  41309513 ggactaaaaatgttgatggaaaactttataaagactaaaaagtatgattttattttgtagg 41309453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 49611852 - 49611804
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||| | | |||||||||||| ||||||||||||| ||||||||    
T  49611852 gactaaaaacactaacagaaaaatttgtagggactaaaaagtgtgattt 49611804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 54627011 - 54626951
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||| | ||| |||| ||| |||||| |||||||||||||||  |||||||||    
T  54627011 ggactaaaaatactaacaaaaaattttgtagggattaaaaaatgtgatttatttttgtagg 54626951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 291 - 383
Target Start/End: Complemental strand, 8778396 - 8778305
Alignment:
Q  291 ggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| ||| | ||| |||||||||||||||||| ||||| ||| | |||| |||||||||||| |||||||| ||||| ||||    
T  8778396 ggactaaaaatgctgatgctattt-tttacaaggactaaaaatgttgacggaatattttacagggactaaaaagtgtgatttcattttatagg 8778305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 20892674 - 20892618
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttg 379  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||||||||||||    
T  20892674 ggactaaaaatgttgatggaaaattttatagggactaaaaaatgtgattttattttg 20892618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 31765150 - 31765210
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  31765150 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgtagg 31765210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 725638 - 725573
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| ||||||||||||| ||||   |||| ||||||||||||||||| |||||||||||||||||    
T  725638 tttataaggactaaaaatgttgatgaaaaattttatagggactaaaaagtgtgattttattttgta 725573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 6334226 - 6334161
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| |||||||||||||  |||| |||||  |||||||||||||||| |||||||||||||||||    
T  6334226 tttataaggactaaaaatgctgacggaaaatcttatagggactaaaaagtgtgattttattttgta 6334161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 24664441 - 24664505
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||    
T  24664441 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgt 24664505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 25903561 - 25903621
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||||||| ||||||||||||||||||||| ||||    
T  25903561 ggactaaaaatgttgatggaaaattttatagggattaaaaaatgtgattttattttatagg 25903621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 4902389 - 4902294
Alignment:
Q  288 caaggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| || ||||  ||| |||| ||  ||||||||| ||||  ||||| || ||||||| |||||| |||||||||||||||||||    
T  4902389 caaggactaaaaatactgatgaaatttttttataaaaactaaaaatgttgatggaaaatttaatagggattaaaaagtgtgattttattttgtagg 4902294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 288 - 383
Target Start/End: Complemental strand, 4949787 - 4949692
Alignment:
Q  288 caaggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| || ||||  ||| |||| ||  ||||||||| ||||  ||||| || ||||||| |||||| |||||||||||||||||||    
T  4949787 caaggactaaaaatactgatgaaatttttttataaaaactaaaaatgttgatggaaaatttaatagggattaaaaagtgtgattttattttgtagg 4949692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 22039360 - 22039427
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||||||||| || || |||| |||| || ||||||||| |||||||||||||||||||    
T  22039360 tttataaggactaaaaataatggcaaaaaattttacagcgactaaaaagtgtgattttattttgtagg 22039427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 35428949 - 35428890
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||  |||  ||||| ||||||||||||||||| ||||||||||||||||||    
T  35428949 ggactaaaaattctgatggaaaattttatagggactaaaaagtgtgattttattttgtag 35428890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 14370113 - 14370155
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  14370113 gaaaattttatagggactaaaaagtgtgattttattttgtagg 14370155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 16970992 - 16970934
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||  |||| ||||| ||||||  |||||||||||||||||||||||||||||    
T  16970992 actaaaaatgctgacggaaaattttataaagactaaaaaatgtgattttattttgtagg 16970934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 380
Target Start/End: Original strand, 25921743 - 25921797
Alignment:
Q  326 ctaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    ||||||||  |||| ||||| ||||||||||||||||| ||||||||||||||||    
T  25921743 ctaaaaatgctgacggaaaattttatagggactaaaaagtgtgattttattttgt 25921797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 29419399 - 29419365
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||||||||||||||||||||||||||||    
T  29419399 tttatagggactaaaaaatgtgattttattttgta 29419365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 378
Target Start/End: Complemental strand, 36065828 - 36065766
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||    
T  36065828 tttataaggactaaaaattttgatggaaaattttataaggactaaaaagtgtgattttatttt 36065766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 1598772 - 1598731
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  1598772 aaaattttatagggactaaaaagtgtgattttattttgtagg 1598731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 8846823 - 8846786
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  8846823 gaaaattttatagggactaaaaaatgtgattttatttt 8846786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 10214378 - 10214329
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||  ||||||||||||||||||||||||||    
T  10214378 ggactaaaaacattaacagaaatttttatagggactaaaaaatgtgattt 10214329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 21099814 - 21099754
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||  |||||||| ||||||||||||||||||||||||||||    
T  21099814 ggactaaaaatgctgatggaaatttttataggaactaaaaaatgtgattttattttgtagg 21099754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 33940468 - 33940528
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||  ||||| |||||||| |||||||| | |||||||||||||||||    
T  33940468 ggactaaaaatgttgatggaaaattttataggaactaaaaagtatgattttattttgtagg 33940528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 128772 - 128733
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  128772 aaaaatttatagggactaaaaagtatgattttattttgta 128733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 16101251 - 16101318
Alignment:
Q  315 ctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||||||| |||||||| | ||||| |||| |||| |||||||||| | || |||||||||||||||    
T  16101251 ctttacaagaactaaaaacaatgacacaaaattttacagggactaaatagtgcgattttattttgtag 16101318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 378
Target Start/End: Original strand, 30098858 - 30098913
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||||| ||| |||||||| ||| ||||||||||||| ||||||||| ||||    
T  30098858 ggactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattttttttt 30098913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 350 - 385
Target Start/End: Original strand, 36387001 - 36387036
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| |||||||||||||||||||||||||||||||    
T  36387001 atagagactaaaaaatgtgattttattttgtaggaa 36387036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 41738016 - 41738083
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||   |||| ||||||| ||||||||| | |||||||||||||||||    
T  41738016 tttataaggactaaaaatgttgatgaaaaattttatagagactaaaaactttgattttattttgtagg 41738083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 45194645 - 45194578
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| ||| |||||| |||||||||||||| ||||    
T  45194645 tttataaggactaaaaatgttgatggaaaattttataaggattaaaaagtgtgattttattttatagg 45194578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 18677152 - 18677110
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||| |||||||||| |||||||||||||||||||    
T  18677152 gaaaattttataaggactaaaaagtgtgattttattttgtagg 18677110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 356 - 385
Target Start/End: Original strand, 5288359 - 5288388
Alignment:
Q  356 actaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||||||||||||||||||||||||    
T  5288359 actaaaaaatgtgattttattttgtaggaa 5288388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 19030063 - 19030022
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||| ||||||| |||||||||||||||||||    
T  19030063 aaaattttataggggctaaaaagtgtgattttattttgtagg 19030022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 350 - 383
Target Start/End: Complemental strand, 32210401 - 32210368
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||| |||||||||||||||||||    
T  32210401 atagggactaaaaagtgtgattttattttgtagg 32210368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 41974333 - 41974292
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||| | |||||||||||||||||||    
T  41974333 aaaattttatagggactaaatagtgtgattttattttgtagg 41974292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Original strand, 41974438 - 41974471
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| |||||||||||||||||||||    
T  41974438 agggactaaaaattgtgattttattttgtaggaa 41974471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 45416415 - 45416366
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    ||||||||||  ||||||||||| |||| |||||||||||| ||||||||    
T  45416415 ggactaaaaactttgacagaaaattttagagggactaaaaagtgtgattt 45416366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 350 - 378
Target Start/End: Complemental strand, 6828182 - 6828154
Alignment:
Q  350 atagggactaaaaaatgtgattttatttt 378  Q
    |||||||||||||||||||||||||||||    
T  6828182 atagggactaaaaaatgtgattttatttt 6828154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Complemental strand, 10300426 - 10300398
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  10300426 gactaaaaaatgtgattttattttgtagg 10300398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 382
Target Start/End: Complemental strand, 11688054 - 11688014
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| |||||||| |||||||| ||||||||||||||||||    
T  11688054 aaaagtttataggaactaaaaagtgtgattttattttgtag 11688014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 11723559 - 11723619
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||| ||||  ||||| |||| |||||||||||| |||||||||||||| ||||    
T  11723559 ggaccaaaaatgttgatggaaaattttacagggactaaaaagtgtgattttattttatagg 11723619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 12262847 - 12262787
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  ||||  |||  ||||||||||||||||| ||| |||||||||||||||    
T  12262847 ggactaaaaatgctgacgaaaatttttatagggactaaaaagtgttattttattttgtagg 12262787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 384
Target Start/End: Complemental strand, 14463370 - 14463338
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagga 384  Q
    |||||||||||||| ||||||||||||||||||    
T  14463370 agggactaaaaaatatgattttattttgtagga 14463338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Original strand, 22304005 - 22304033
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  22304005 gactaaaaaatgtgattttattttgtagg 22304033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 24861848 - 24861789
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||| |||| ||||| |||| ||| |||||||| | |||||||||||||||||    
T  24861848 ggactaaaaataatgacggaaaattttacagg-actaaaaagtttgattttattttgtagg 24861789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 15608848 - 15608908
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  ||| |||||| ||||||||||||||||| |||||||||||||||||||    
T  15608848 ggactaaaaatgctgatagaaaattttatagggactaaaaagtgtgattttattttgtagg 15608908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 52752365 - 52752429
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||||||||  ||||| |||||| |||||||||| ||||||||||||||||    
T  52752365 tttataaggactaaaaatattgatggaaaattttataaggactaaaaagtgtgattttattttgt 52752429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 382
Target Start/End: Complemental strand, 7065119 - 7065056
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||||||  |||  ||||| ||||||||||||||||| ||||||||||||||||||    
T  7065119 acaaggactaaaaatgctgatggaaaattttatagggactaaaaactgtgattttattttgtag 7065056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 381
Target Start/End: Original strand, 21068628 - 21068686
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||| ||||||||||||||    
T  21068628 ggactaaaaatgttgaaggaaaattttatagggactaaaaaatgcgattttattttgta 21068686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 316 - 382
Target Start/End: Original strand, 26674755 - 26674821
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||||    
T  26674755 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtag 26674821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 323 - 381
Target Start/End: Complemental strand, 28750164 - 28750106
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||    
T  28750164 ggactaaaaatgttgatggaaaattttatagggactaaaaagtgtgattttattttgta 28750106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 31730629 - 31730571
Alignment:
Q  325 actaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||| ||||  ||||| ||||||||||||||||| |||||||||||||||||||    
T  31730629 actaaaaatgttgatggaaaattttatagggactaaaaattgtgattttattttgtagg 31730571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 316 - 381
Target Start/End: Complemental strand, 12857730 - 12857665
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| |||||||||||||  |||  ||||| ||||||||||||||||| |||||||||||||||||    
T  12857730 tttataaggactaaaaatgctgatggaaaattttatagggactaaaaagtgtgattttattttgta 12857665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 1895859 - 1895915
Alignment:
Q  327 taaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| ||||  ||||| ||||||||||||||||||||| |||||||||||||||    
T  1895859 taaaaatgttgatggaaaattttatagggactaaaaaatgtaattttattttgtagg 1895915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 10066359 - 10066415
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttg 379  Q
    ||||||||||||||||  ||||| |||||||||||||||||  ||||||||||||||    
T  10066359 ggactaaaaatattgatggaaaattttatagggactaaaaagcgtgattttattttg 10066415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 372
Target Start/End: Complemental strand, 10371153 - 10371097
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||| |||||||||| | | |||||||||||||||||||||||||| ||||||||    
T  10371153 tttacagggactaaaaacactaacagaaaaatttatagggactaaaaagtgtgattt 10371097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 341 - 385
Target Start/End: Original strand, 46136833 - 46136877
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||    
T  46136833 gaaaattttatagggactaaaaagtgtgattttattttgtaggaa 46136877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 316 - 382
Target Start/End: Complemental strand, 2284459 - 2284394
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||| ||||||||| ||||  ||||||||||||| ||||||||| ||||||||||||||||||    
T  2284459 tttataagaactaaaaatgttgat-gaaaaatttatagagactaaaaagtgtgattttattttgtag 2284394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 26922255 - 26922213
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  26922255 gaaaattttatagggactaaaaagtgtgattttattttgtagg 26922213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 32155279 - 32155238
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||||||| |||||||||||||||    
T  32155279 aaaattttatagggactaaaaaatgtaattttattttgtagg 32155238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 316 - 381
Target Start/End: Original strand, 36772519 - 36772584
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||| |||||||||||||  ||| |||||| |||||||  |||||||| |||||||||||||||||    
T  36772519 tttataaggactaaaaatgctgatagaaaattttatagaaactaaaaagtgtgattttattttgta 36772584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 46184962 - 46185015
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | |||||||| ||| ||||||||||||||||||||||    
T  46184962 acaaggactaaaaacactaacagaaaattttgtagggactaaaaaatgtgattt 46185015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 51053704 - 51053745
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||||||||    
T  51053704 aaaattttatagggactaaaaagtgtgattttattttgtagg 51053745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 383
Target Start/End: Complemental strand, 51194879 - 51194846
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||||    
T  51194879 atagggactaaaaaatgtgattttattttgtagg 51194846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 3617328 - 3617364
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  3617328 tttatagggactaaaaagtgtgattttattttgtagg 3617364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 41807736 - 41807776
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||||||  ||||||||||||||||||||||||||||    
T  41807736 ggactaaaaatgctgacagaaaaatttatagggactaaaaa 41807776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 324 - 383
Target Start/End: Original strand, 28215930 - 28215989
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||| ||||  ||||| ||||||| ||||||||| ||||| |||||||||||||    
T  28215930 gactaaaaatgttgatggaaaattttatagagactaaaaagtgtgactttattttgtagg 28215989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 28259846 - 28259787
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||  |||  |||||  |||||||||||||||||| ||||||||||||||||    
T  28259846 ggactaaaaatgctgatggaaaatgttatagggactaaaaaatatgattttattttgtag 28259787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 5333676 - 5333718
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||| |||||||| |||||||||||||||||||||    
T  5333676 gaaaattttataaggactaaataatgtgattttattttgtagg 5333718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 383
Target Start/End: Complemental strand, 6057215 - 6057185
Alignment:
Q  353 gggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||||    
T  6057215 gggactaaaaaatgtgattttattttgtagg 6057185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Original strand, 6057291 - 6057333
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| ||||||||||||||||| ||||| |||||||||||||    
T  6057291 gaaaattttatagggactaaaaagtgtgaatttattttgtagg 6057333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 21390900 - 21390954
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttatttt 378  Q
    |||||||||| |||| |||||| || ||||||| |||| ||||||||||||||||    
T  21390900 gactaaaaatgttgatagaaaatttaatagggattaaataatgtgattttatttt 21390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 35937768 - 35937726
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||||| |||||||||| |||||||||||||||||    
T  35937768 gaaaattttataggaactaaaaaatatgattttattttgtagg 35937726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 383
Target Start/End: Complemental strand, 49804243 - 49804201
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||| |||||| |||||||||| |||||||||||||||||||    
T  49804243 gaaaattttataaggactaaaaagtgtgattttattttgtagg 49804201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 338 - 372
Target Start/End: Complemental strand, 50934272 - 50934238
Alignment:
Q  338 acagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||| ||||||||||||||||||||||||||    
T  50934272 acagaaaattttatagggactaaaaaatgtgattt 50934238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 347 - 381
Target Start/End: Complemental strand, 51345539 - 51345505
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgta 381  Q
    ||||||||||||||||| |||||||||||||||||    
T  51345539 tttatagggactaaaaagtgtgattttattttgta 51345505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 4058340 - 4058389
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  4058340 ggactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattt 4058389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 354 - 383
Target Start/End: Complemental strand, 10066237 - 10066208
Alignment:
Q  354 ggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||    
T  10066237 ggactaaaaaatgtgattttattttgtagg 10066208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 10372968 - 10373017
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||| | || ||||| ||| ||||||||||||||||||||||    
T  10372968 ggactaaaaatactaacggaaaattttgtagggactaaaaaatgtgattt 10373017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Complemental strand, 28215841 - 28215808
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    ||||||||||||||||||||||||||| ||||||    
T  28215841 agggactaaaaaatgtgattttattttataggaa 28215808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 352 - 385
Target Start/End: Original strand, 28750252 - 28750285
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| |||||||||||||||||||||    
T  28750252 agggactaaaaagtgtgattttattttgtaggaa 28750285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 316 - 385
Target Start/End: Complemental strand, 34340689 - 34340620
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||| |||||||||||||  ||| | |||| ||||||| ||||||||| | |||||||||||| ||||||    
T  34340689 tttataaggactaaaaatggtgataaaaaattttatagcgactaaaaagtatgattttattttataggaa 34340620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 36796570 - 36796619
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| ||| |||||||| ||| ||||||||||||| ||||||||    
T  36796570 ggactaaaaacattaacagaaaattttgtagggactaaaaagtgtgattt 36796619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Complemental strand, 42928712 - 42928671
Alignment:
Q  341 gaaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    ||||| |||||| |||||||||| ||||||||||||||||||    
T  42928712 gaaaattttataaggactaaaaagtgtgattttattttgtag 42928671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 342 - 383
Target Start/End: Complemental strand, 43684792 - 43684751
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||| |||||||||||||| ||||    
T  43684792 aaaattttatagggactaaaaagtgtgattttattttatagg 43684751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Original strand, 45323787 - 45323836
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | |||||||| ||| ||||||||||||||||||||||    
T  45323787 ggactaaaaacactaacagaaaattttgtagggactaaaaaatgtgattt 45323836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 372
Target Start/End: Complemental strand, 45583145 - 45583096
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||| | | | |||||| ||||||||||||||||||||||||||    
T  45583145 ggactaaaaacactaatagaaaattttatagggactaaaaaatgtgattt 45583096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 46668152 - 46668205
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||| | | |||||||| ||| ||||||||||||||| ||||||    
T  46668152 acaaggactaaaaacactaacagaaaattttgtagggactaaaaaatatgattt 46668205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 48468436 - 48468489
Alignment:
Q  319 acaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattt 372  Q
    |||||||||||||||| | || ||||| ||| ||||||||||||| ||||||||    
T  48468436 acaaggactaaaaatactaacggaaaattttgtagggactaaaaagtgtgattt 48468489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 44452004 - 44452064
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| ||||||||||||||| | | |||||||||||||||||    
T  44452004 ggactaaaaatgatgatggaaaattttatagggactaaatagtttgattttattttgtagg 44452064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 383
Target Start/End: Original strand, 45681253 - 45681313
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||  |||  ||||| |||||| |||||||| | |||||||||||||||||||    
T  45681253 ggactaaaaatgatgatggaaaattttataaggactaaatagtgtgattttattttgtagg 45681313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 383
Target Start/End: Original strand, 45967394 - 45967430
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| | |||||||||||||||||    
T  45967394 tttatagggactaaaaagtatgattttattttgtagg 45967430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 363
Target Start/End: Original strand, 46917666 - 46917706
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||||||| |||| ||||| |||||||||||||||||    
T  46917666 ggactaaaaatagtgactgaaaattttatagggactaaaaa 46917706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 322 - 385
Target Start/End: Complemental strand, 64751 - 64688
Alignment:
Q  322 aggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtaggaa 385  Q
    |||||||||||| ||||   |||| |||||||| ||||||||||||||||||||||||||||||    
T  64751 aggactaaaaatgttgatgaaaaattttataggtactaaaaaatgtgattttattttgtaggaa 64688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 383
Target Start/End: Original strand, 262799 - 262866
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| |||||||||||||||||||    
T  262799 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgtagg 262866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0115 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 316 - 380
Target Start/End: Complemental strand, 42969 - 42905
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| ||||  ||||| |||||| |||||||||| ||||||||||||||||    
T  42969 tttataaggactaaaaatgttgatggaaaattttataaggactaaaaagtgtgattttattttgt 42905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 316 - 383
Target Start/End: Complemental strand, 17262 - 17195
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| |||||||| ||||  |||  ||||| ||||||||||||||||||| |||||||||||||||||    
T  17262 tttataaggactacaaatggtgatggaaaattttatagggactaaaaaatatgattttattttgtagg 17195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 383
Target Start/End: Original strand, 26606 - 26647
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    |||| ||||||||||||||||||| |||||||||||||||||    
T  26606 aaaattttatagggactaaaaaatatgattttattttgtagg 26647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 350 - 383
Target Start/End: Complemental strand, 352687 - 352654
Alignment:
Q  350 atagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||||    
T  352687 atagggactaaaaaatgtgattttattttgtagg 352654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 287 - 383
Target Start/End: Complemental strand, 28254 - 28159
Alignment:
Q  287 acaaggactaaaaatgctaatgatttttctttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||| |||||||||| ||||   || |||| |||||||||||||  |||| ||||| |||| |||||||||||| ||  |||||||||||||||    
T  28254 acaaggattaaaaatgctgatgaaaatt-tttataaggactaaaaatgatgacggaaaattttacagggactaaaaagtgcaattttattttgtagg 28159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 347 - 383
Target Start/End: Complemental strand, 48885 - 48849
Alignment:
Q  347 tttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||| |||||||||||||||||||    
T  48885 tttatagggactaaaaagtgtgattttattttgtagg 48849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 380
Target Start/End: Original strand, 37779 - 37843
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgt 380  Q
    |||| ||||||||||||| || |  ||||| |||||| |||||||||| ||||||||||||||||    
T  37779 tttataaggactaaaaatgttaatggaaaattttataaggactaaaaagtgtgattttattttgt 37843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 146453 - 146397
Alignment:
Q  323 ggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttg 379  Q
    ||||||||||| ||||   |||| |||||||||| ||||||||||||||||||||||    
T  146453 ggactaaaaatgttgatgaaaaattttatagggattaaaaaatgtgattttattttg 146397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 352 - 383
Target Start/End: Original strand, 3578 - 3609
Alignment:
Q  352 agggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||||||||||||||||||||||||    
T  3578 agggactaaaaaatgtgattttattttgtagg 3609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 344 - 383
Target Start/End: Complemental strand, 16387 - 16348
Alignment:
Q  344 aaatttatagggactaaaaaatgtgattttattttgtagg 383  Q
    ||||||||||| ||||||||||||||||||||||| ||||    
T  16387 aaatttataggaactaaaaaatgtgattttattttatagg 16348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 316 - 379
Target Start/End: Original strand, 323 - 386
Alignment:
Q  316 tttacaaggactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttg 379  Q
    |||||||||||||| |||  |||  ||||| |||||| |||||||||| |||||||||||||||    
T  323 tttacaaggactaataatgctgatcgaaaattttataaggactaaaaagtgtgattttattttg 386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 324 - 381
Target Start/End: Original strand, 178404 - 178460
Alignment:
Q  324 gactaaaaatattgacagaaaaatttatagggactaaaaaatgtgattttattttgta 381  Q
    |||||||||| ||||  ||||| |||||||||||| |||| |||||||||||||||||    
T  178404 gactaaaaatgttgatggaaaattttatagggact-aaaagtgtgattttattttgta 178460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0483 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0483
Description:

Target: scaffold0483; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 355 - 383
Target Start/End: Original strand, 9463 - 9491
Alignment:
Q  355 gactaaaaaatgtgattttattttgtagg 383  Q
    |||||||||||||||||||||||||||||    
T  9463 gactaaaaaatgtgattttattttgtagg 9491  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 354 - 382
Target Start/End: Original strand, 18621 - 18649
Alignment:
Q  354 ggactaaaaaatgtgattttattttgtag 382  Q
    |||||||||||||||||||||||||||||    
T  18621 ggactaaaaaatgtgattttattttgtag 18649  T

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Target: scaffold0036 (Bit Score: 29; Significance: 0.0000006; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 363
Target Start/End: Original strand, 32643 - 32679
Alignment:
Q  327 taaaaatattgacagaaaaatttatagggactaaaaa 363  Q
    |||||||| |||||||||| |||||||||||||||||    
T  32643 taaaaatactgacagaaaattttatagggactaaaaa 32679  T

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Target: scaffold0036; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 382
Target Start/End: Original strand, 32689 - 32729
Alignment:
Q  342 aaaaatttatagggactaaaaaatgtgattttattttgtag 382  Q
    |||| ||||||||||||||||||||||||||  ||||||||    
T  32689 aaaattttatagggactaaaaaatgtgatttatttttgtag 32729  T

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