View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5745_low_1 (Length: 923)

Name: NF5745_low_1
Description: NF5745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5745_low_1
NF5745_low_1
[»] chr2 (63 HSPs)
chr2 (11-904)||(10618544-10619437)
chr2 (660-802)||(32592537-32592683)
chr2 (599-804)||(26201976-26202186)
chr2 (672-804)||(43279514-43279649)
chr2 (606-754)||(20952358-20952506)
chr2 (599-734)||(15305697-15305832)
chr2 (762-865)||(36114306-36114409)
chr2 (423-513)||(44439230-44439324)
chr2 (704-810)||(42868483-42868589)
chr2 (599-868)||(2416197-2416471)
chr2 (621-754)||(15757592-15757725)
chr2 (599-696)||(30331812-30331909)
chr2 (817-868)||(1633691-1633742)
chr2 (431-513)||(3476452-3476535)
chr2 (756-831)||(4026738-4026813)
chr2 (328-423)||(36307044-36307139)
chr2 (602-696)||(42419854-42419948)
chr2 (762-832)||(42420374-42420444)
chr2 (429-512)||(42982523-42982608)
chr2 (359-495)||(4894099-4894244)
chr2 (328-417)||(11759770-11759859)
chr2 (816-868)||(12795666-12795718)
chr2 (442-514)||(22535977-22536049)
chr2 (622-801)||(41851486-41851670)
chr2 (343-415)||(42774783-42774854)
chr2 (603-743)||(45229525-45229665)
chr2 (600-743)||(4606939-4607082)
chr2 (660-789)||(16451088-16451215)
chr2 (672-746)||(36125372-36125446)
chr2 (429-495)||(42740975-42741041)
chr2 (423-480)||(33961996-33962053)
chr2 (431-531)||(2002718-2002818)
chr2 (330-406)||(4007116-4007192)
chr2 (605-641)||(7103391-7103427)
chr2 (442-498)||(12037056-12037112)
chr2 (762-810)||(12464553-12464601)
chr2 (603-687)||(27317449-27317533)
chr2 (437-513)||(33019185-33019261)
chr2 (429-514)||(37420216-37420303)
chr2 (761-868)||(43570300-43570405)
chr2 (762-801)||(423773-423812)
chr2 (332-367)||(5973619-5973654)
chr2 (600-647)||(7928211-7928258)
chr2 (761-868)||(9395014-9395121)
chr2 (328-411)||(12110918-12111001)
chr2 (754-809)||(13325513-13325568)
chr2 (472-514)||(21743814-21743857)
chr2 (329-423)||(680203-680296)
chr2 (599-641)||(1830155-1830197)
chr2 (429-495)||(3352074-3352140)
chr2 (327-413)||(6767764-6767850)
chr2 (660-754)||(12289800-12289894)
chr2 (429-479)||(16488342-16488392)
chr2 (761-807)||(18962117-18962163)
chr2 (762-856)||(42457844-42457938)
chr2 (689-734)||(1633494-1633539)
chr2 (767-804)||(2195909-2195946)
chr2 (815-868)||(15757809-15757862)
chr2 (705-754)||(40279270-40279319)
chr2 (705-754)||(40279340-40279389)
chr2 (705-754)||(40279410-40279459)
chr2 (762-799)||(40835487-40835524)
chr2 (603-684)||(44590097-44590178)
[»] chr6 (47 HSPs)
chr6 (423-514)||(1485161-1485252)
chr6 (363-572)||(34620807-34621025)
chr6 (363-572)||(34748244-34748462)
chr6 (429-571)||(2234437-2234579)
chr6 (760-868)||(264255-264363)
chr6 (599-724)||(848022-848146)
chr6 (328-423)||(1499979-1500074)
chr6 (423-507)||(30926793-30926878)
chr6 (328-483)||(9505780-9505944)
chr6 (763-830)||(4163097-4163164)
chr6 (763-830)||(4224718-4224785)
chr6 (431-574)||(5724653-5724796)
chr6 (423-497)||(34898691-34898766)
chr6 (601-745)||(35070568-35070708)
chr6 (760-830)||(9093634-9093704)
chr6 (606-680)||(10645304-10645378)
chr6 (469-531)||(35098235-35098297)
chr6 (341-406)||(7953079-7953144)
chr6 (330-414)||(46201-46285)
chr6 (330-414)||(765298-765382)
chr6 (432-480)||(10874507-10874555)
chr6 (330-405)||(3436796-3436871)
chr6 (429-483)||(31305868-31305922)
chr6 (599-687)||(6538584-6538672)
chr6 (762-810)||(8147644-8147692)
chr6 (760-864)||(9559619-9559723)
chr6 (762-810)||(24626237-24626285)
chr6 (442-514)||(26280584-26280656)
chr6 (766-810)||(31623502-31623546)
chr6 (599-687)||(34404638-34404726)
chr6 (762-810)||(35070710-35070758)
chr6 (422-513)||(852512-852603)
chr6 (359-414)||(882774-882829)
chr6 (328-423)||(3525004-3525099)
chr6 (345-420)||(22692639-22692714)
chr6 (442-571)||(10400729-10400859)
chr6 (330-376)||(20871627-20871673)
chr6 (601-635)||(30536879-30536913)
chr6 (443-511)||(3436917-3436986)
chr6 (429-514)||(4910887-4910972)
chr6 (453-513)||(6544543-6544604)
chr6 (437-514)||(6654119-6654196)
chr6 (705-742)||(31624959-31624996)
chr6 (761-790)||(31671153-31671182)
chr6 (762-831)||(33117463-33117532)
chr6 (429-466)||(34027438-34027475)
chr6 (600-657)||(35069525-35069582)
[»] chr3 (71 HSPs)
chr3 (330-492)||(35264324-35264495)
chr3 (431-514)||(35058340-35058423)
chr3 (602-862)||(402457-402721)
chr3 (332-513)||(37334949-37335139)
chr3 (606-810)||(20880419-20880627)
chr3 (423-514)||(36302162-36302253)
chr3 (423-514)||(44958621-44958712)
chr3 (672-746)||(30443904-30443978)
chr3 (334-390)||(50427184-50427240)
chr3 (660-782)||(21367637-21367764)
chr3 (599-754)||(39980732-39980887)
chr3 (610-724)||(31365111-31365225)
chr3 (423-514)||(30301013-30301105)
chr3 (436-508)||(40147878-40147950)
chr3 (336-423)||(584712-584799)
chr3 (760-830)||(34638042-34638113)
chr3 (666-804)||(36631030-36631173)
chr3 (672-830)||(43062618-43062776)
chr3 (330-412)||(31766160-31766242)
chr3 (329-423)||(32112073-32112167)
chr3 (770-868)||(34235164-34235262)
chr3 (598-751)||(901930-902082)
chr3 (359-491)||(3776524-3776665)
chr3 (330-406)||(42644302-42644379)
chr3 (422-483)||(51285580-51285641)
chr3 (454-514)||(7717367-7717427)
chr3 (760-868)||(31403242-31403350)
chr3 (439-514)||(41115392-41115468)
chr3 (423-467)||(46853549-46853593)
chr3 (604-687)||(9832672-9832755)
chr3 (423-513)||(25359589-25359679)
chr3 (610-696)||(31365232-31365318)
chr3 (345-411)||(52925551-52925617)
chr3 (341-414)||(1441331-1441404)
chr3 (605-650)||(25447163-25447208)
chr3 (345-406)||(25577696-25577757)
chr3 (762-868)||(30956706-30956822)
chr3 (762-868)||(30972518-30972634)
chr3 (606-681)||(32582816-32582888)
chr3 (762-810)||(24684903-24684951)
chr3 (330-394)||(30958145-30958209)
chr3 (330-394)||(30973957-30974021)
chr3 (601-680)||(42799880-42799960)
chr3 (816-868)||(42800057-42800109)
chr3 (328-392)||(42913164-42913228)
chr3 (328-360)||(49356304-49356336)
chr3 (813-868)||(1508722-1508777)
chr3 (442-572)||(3845148-3845276)
chr3 (442-513)||(5406886-5406957)
chr3 (599-650)||(16072953-16073004)
chr3 (329-404)||(25620179-25620254)
chr3 (816-867)||(31365416-31365467)
chr3 (756-830)||(34632131-34632206)
chr3 (601-696)||(42545312-42545407)
chr3 (442-497)||(52364047-52364102)
chr3 (423-473)||(23187865-23187915)
chr3 (347-405)||(24916581-24916639)
chr3 (329-423)||(25129451-25129545)
chr3 (430-500)||(27499383-27499453)
chr3 (333-423)||(41591269-41591359)
chr3 (345-415)||(48089618-48089688)
chr3 (675-744)||(13715560-13715629)
chr3 (608-649)||(26911699-26911740)
chr3 (609-650)||(33405114-33405155)
chr3 (606-687)||(34610725-34610806)
chr3 (661-726)||(37689261-37689325)
chr3 (328-397)||(44958553-44958622)
chr3 (761-829)||(46030911-46030980)
chr3 (329-366)||(49158656-49158693)
chr3 (441-513)||(51167846-51167919)
chr3 (328-417)||(53567961-53568050)
[»] chr4 (75 HSPs)
chr4 (603-754)||(54426046-54426197)
chr4 (602-754)||(17822780-17822932)
chr4 (664-868)||(50662715-50662918)
chr4 (601-754)||(21731570-21731723)
chr4 (423-483)||(33843987-33844047)
chr4 (429-532)||(32818391-32818494)
chr4 (343-513)||(55927696-55927875)
chr4 (602-746)||(26780-26923)
chr4 (601-733)||(25904137-25904269)
chr4 (614-746)||(29657395-29657527)
chr4 (602-754)||(53294029-53294181)
chr4 (429-572)||(2635084-2635227)
chr4 (328-423)||(43868215-43868310)
chr4 (762-868)||(3155487-3155593)
chr4 (330-514)||(22250205-22250398)
chr4 (605-681)||(8705017-8705093)
chr4 (423-483)||(37439155-37439215)
chr4 (606-754)||(39603090-39603237)
chr4 (429-552)||(35065004-35065127)
chr4 (773-868)||(26982-27079)
chr4 (429-514)||(2206364-2206450)
chr4 (608-726)||(22030234-22030352)
chr4 (330-412)||(38740287-38740369)
chr4 (762-868)||(44863042-44863148)
chr4 (643-804)||(50681045-50681211)
chr4 (442-483)||(8330126-8330167)
chr4 (429-513)||(30357492-30357576)
chr4 (605-744)||(2244064-2244203)
chr4 (423-474)||(4243406-4243457)
chr4 (672-751)||(7839346-7839425)
chr4 (423-513)||(18597019-18597110)
chr4 (420-510)||(33843661-33843756)
chr4 (604-754)||(40830947-40831096)
chr4 (762-868)||(11389410-11389516)
chr4 (328-414)||(20911810-20911896)
chr4 (429-494)||(1048716-1048781)
chr4 (713-801)||(9760391-9760484)
chr4 (422-483)||(10185204-10185265)
chr4 (605-726)||(13126494-13126615)
chr4 (607-696)||(15173223-15173312)
chr4 (700-868)||(44138443-44138616)
chr4 (328-392)||(24364103-24364167)
chr4 (599-647)||(25571369-25571417)
chr4 (600-696)||(42403936-42404031)
chr4 (423-573)||(45329766-45329918)
chr4 (328-392)||(48575494-48575558)
chr4 (328-403)||(5835778-5835853)
chr4 (442-513)||(16643958-16644029)
chr4 (345-416)||(17898057-17898127)
chr4 (433-480)||(20712664-20712710)
chr4 (760-807)||(25885804-25885851)
chr4 (604-695)||(29774302-29774393)
chr4 (442-513)||(51093238-51093309)
chr4 (676-743)||(55302263-55302330)
chr4 (348-406)||(1023849-1023907)
chr4 (429-479)||(2206850-2206900)
chr4 (433-495)||(9064229-9064291)
chr4 (601-635)||(22662165-22662199)
chr4 (601-635)||(22666644-22666678)
chr4 (600-650)||(27043743-27043793)
chr4 (472-514)||(29779118-29779160)
chr4 (336-410)||(35122301-35122375)
chr4 (762-804)||(43505904-43505946)
chr4 (766-804)||(44797834-44797872)
chr4 (762-804)||(51630059-51630101)
chr4 (432-514)||(55639744-55639826)
chr4 (431-495)||(2206515-2206580)
chr4 (345-406)||(2206622-2206683)
chr4 (599-632)||(20109139-20109172)
chr4 (600-725)||(24169295-24169420)
chr4 (326-363)||(25405729-25405766)
chr4 (599-751)||(43505940-43506093)
chr4 (453-574)||(48045746-48045867)
chr4 (332-405)||(50945390-50945463)
chr4 (660-733)||(55064859-55064932)
[»] chr8 (54 HSPs)
chr8 (330-552)||(32927833-32928064)
chr8 (601-810)||(35534527-35534738)
chr8 (600-743)||(30251367-30251510)
chr8 (343-539)||(26100072-26100278)
chr8 (331-394)||(7602042-7602105)
chr8 (643-746)||(26771276-26771379)
chr8 (599-681)||(43717846-43717928)
chr8 (713-865)||(30657798-30657944)
chr8 (427-513)||(4554314-4554401)
chr8 (643-746)||(18133667-18133770)
chr8 (330-424)||(10368043-10368137)
chr8 (429-527)||(13418840-13418938)
chr8 (599-804)||(35643900-35644103)
chr8 (327-424)||(3206135-3206231)
chr8 (342-423)||(28805254-28805335)
chr8 (328-380)||(1820460-1820512)
chr8 (328-380)||(1854905-1854957)
chr8 (599-687)||(32840898-32840986)
chr8 (328-423)||(9461450-9461544)
chr8 (600-802)||(10758170-10758376)
chr8 (623-802)||(35749506-35749684)
chr8 (332-386)||(4336571-4336625)
chr8 (347-417)||(4950568-4950638)
chr8 (429-495)||(13384675-13384741)
chr8 (328-366)||(18355760-18355798)
chr8 (601-686)||(38602400-38602483)
chr8 (330-423)||(18123305-18123398)
chr8 (660-753)||(37945600-37945693)
chr8 (344-412)||(1373081-1373149)
chr8 (433-469)||(3478728-3478764)
chr8 (442-498)||(15677850-15677906)
chr8 (346-386)||(30706283-30706323)
chr8 (336-424)||(38516328-38516416)
chr8 (429-513)||(38868478-38868562)
chr8 (423-514)||(16972079-16972170)
chr8 (423-513)||(38203265-38203356)
chr8 (602-753)||(38648355-38648506)
chr8 (598-745)||(43045636-43045783)
chr8 (330-376)||(26559864-26559910)
chr8 (629-754)||(28763371-28763496)
chr8 (330-392)||(32994153-32994215)
chr8 (328-366)||(35550309-35550347)
chr8 (760-830)||(37444493-37444563)
chr8 (440-514)||(37684384-37684458)
chr8 (328-406)||(38715192-38715270)
chr8 (760-826)||(41475138-41475204)
chr8 (431-532)||(4662926-4663027)
chr8 (791-868)||(5404501-5404578)
chr8 (329-382)||(5893332-5893385)
chr8 (431-516)||(8693738-8693823)
chr8 (761-830)||(16210965-16211034)
chr8 (604-645)||(26479897-26479938)
chr8 (351-392)||(32681238-32681279)
chr8 (705-790)||(39881770-39881855)
[»] chr7 (56 HSPs)
chr7 (379-497)||(41788312-41788439)
chr7 (433-513)||(27571842-27571922)
chr7 (607-696)||(34464141-34464230)
chr7 (429-533)||(45004980-45005084)
chr7 (330-552)||(40491519-40491750)
chr7 (436-514)||(5489874-5489952)
chr7 (604-726)||(19302480-19302602)
chr7 (600-804)||(48469992-48470201)
chr7 (763-874)||(20881717-20881828)
chr7 (602-696)||(4970707-4970801)
chr7 (345-423)||(40795917-40795995)
chr7 (422-495)||(30182310-30182383)
chr7 (621-746)||(33601344-33601469)
chr7 (429-498)||(38123687-38123756)
chr7 (344-396)||(39734639-39734691)
chr7 (762-810)||(46078089-46078137)
chr7 (660-742)||(420375-420457)
chr7 (359-514)||(15050271-15050436)
chr7 (606-743)||(20526460-20526597)
chr7 (330-427)||(42481803-42481900)
chr7 (330-406)||(35105254-35105330)
chr7 (813-865)||(38500059-38500111)
chr7 (660-751)||(11619131-11619222)
chr7 (762-801)||(20269527-20269566)
chr7 (660-751)||(21568468-21568559)
chr7 (359-414)||(29829311-29829366)
chr7 (766-868)||(39279646-39279749)
chr7 (329-407)||(48158913-48158991)
chr7 (660-754)||(19022558-19022652)
chr7 (818-868)||(27863843-27863893)
chr7 (762-804)||(28613614-28613656)
chr7 (614-754)||(45790357-45790492)
chr7 (648-733)||(38499874-38499959)
chr7 (336-392)||(597862-597918)
chr7 (429-513)||(1410942-1411026)
chr7 (816-868)||(21568772-21568824)
chr7 (598-650)||(33673184-33673236)
chr7 (429-513)||(41386836-41386920)
chr7 (762-801)||(11700346-11700385)
chr7 (422-513)||(23441244-23441335)
chr7 (813-868)||(40196251-40196306)
chr7 (423-497)||(597961-598034)
chr7 (660-754)||(19214379-19214473)
chr7 (660-734)||(28614456-28614530)
chr7 (444-494)||(28725088-28725138)
chr7 (604-650)||(44822065-44822111)
chr7 (756-802)||(45004716-45004762)
chr7 (704-746)||(46280289-46280331)
chr7 (328-405)||(5489781-5489857)
chr7 (422-511)||(23458041-23458130)
chr7 (673-746)||(30570917-30570990)
chr7 (373-414)||(35222074-35222115)
chr7 (599-684)||(36517650-36517735)
chr7 (762-835)||(40009387-40009460)
chr7 (345-410)||(44856719-44856784)
chr7 (762-799)||(45264048-45264085)
[»] chr5 (60 HSPs)
chr5 (607-734)||(9107113-9107240)
chr5 (605-868)||(9202666-9202934)
chr5 (600-743)||(7705911-7706054)
chr5 (600-746)||(12857251-12857397)
chr5 (600-746)||(12857618-12857764)
chr5 (604-754)||(16937800-16937950)
chr5 (601-733)||(10639977-10640109)
chr5 (330-412)||(14299416-14299498)
chr5 (760-861)||(12425462-12425563)
chr5 (607-856)||(39105360-39105615)
chr5 (643-804)||(16457935-16458100)
chr5 (606-751)||(32009698-32009844)
chr5 (660-804)||(29925789-29925938)
chr5 (437-514)||(34250380-34250457)
chr5 (672-757)||(37954686-37954771)
chr5 (601-804)||(42500157-42500347)
chr5 (768-868)||(1465105-1465205)
chr5 (442-513)||(3738142-3738213)
chr5 (600-809)||(39594751-39594964)
chr5 (422-483)||(24306110-24306171)
chr5 (422-483)||(24367145-24367206)
chr5 (429-514)||(42858087-42858172)
chr5 (772-868)||(28776859-28776955)
chr5 (601-733)||(40426789-40426921)
chr5 (660-726)||(3735131-3735197)
chr5 (423-571)||(10898644-10898791)
chr5 (469-511)||(14299723-14299765)
chr5 (762-868)||(19460466-19460572)
chr5 (600-650)||(35299872-35299922)
chr5 (599-744)||(3932588-3932733)
chr5 (705-837)||(4014442-4014579)
chr5 (429-514)||(36639916-36640001)
chr5 (760-833)||(42569058-42569131)
chr5 (345-405)||(5465398-5465458)
chr5 (761-829)||(7674571-7674639)
chr5 (762-802)||(14932240-14932280)
chr5 (474-514)||(29922035-29922075)
chr5 (762-810)||(35445997-35446045)
chr5 (762-865)||(465841-465944)
chr5 (328-383)||(707644-707699)
chr5 (328-375)||(4848064-4848111)
chr5 (329-424)||(4975053-4975147)
chr5 (329-424)||(6095243-6095338)
chr5 (767-810)||(9107054-9107097)
chr5 (328-423)||(14671104-14671198)
chr5 (603-638)||(29336749-29336784)
chr5 (341-404)||(35138947-35139010)
chr5 (470-513)||(35139093-35139136)
chr5 (442-533)||(43310574-43310665)
chr5 (341-423)||(117420-117502)
chr5 (328-366)||(2124244-2124282)
chr5 (762-804)||(37112338-37112380)
chr5 (762-867)||(39247984-39248090)
chr5 (700-754)||(43300881-43300935)
chr5 (458-514)||(7667588-7667645)
chr5 (426-495)||(18585325-18585394)
chr5 (442-514)||(33608482-33608555)
chr5 (621-686)||(35445778-35445843)
chr5 (442-483)||(36927744-36927785)
chr5 (602-635)||(40335788-40335821)
[»] chr1 (65 HSPs)
chr1 (423-513)||(10324953-10325043)
chr1 (612-754)||(49938750-49938892)
chr1 (330-491)||(3515820-3515979)
chr1 (762-868)||(30581686-30581792)
chr1 (605-754)||(3233933-3234082)
chr1 (602-746)||(2295107-2295251)
chr1 (433-537)||(6021760-6021864)
chr1 (667-810)||(37631539-37631687)
chr1 (429-532)||(28083909-28084012)
chr1 (680-810)||(47432038-47432172)
chr1 (814-868)||(6556892-6556946)
chr1 (766-856)||(9572192-9572282)
chr1 (660-746)||(51929512-51929598)
chr1 (436-533)||(47892416-47892513)
chr1 (423-495)||(20026179-20026251)
chr1 (332-483)||(33693031-33693172)
chr1 (813-868)||(5894294-5894349)
chr1 (328-423)||(11817228-11817323)
chr1 (606-868)||(27146174-27146434)
chr1 (621-804)||(29904707-29904887)
chr1 (330-406)||(13344837-13344913)
chr1 (602-746)||(14576569-14576712)
chr1 (664-744)||(15477578-15477658)
chr1 (662-754)||(17603359-17603451)
chr1 (705-830)||(15784257-15784381)
chr1 (423-498)||(28287351-28287426)
chr1 (813-868)||(33541849-33541904)
chr1 (600-687)||(38001665-38001752)
chr1 (813-868)||(47498974-47499029)
chr1 (817-868)||(51688579-51688630)
chr1 (660-754)||(473167-473260)
chr1 (423-513)||(7790657-7790747)
chr1 (328-366)||(22548210-22548248)
chr1 (429-567)||(24587835-24587976)
chr1 (606-684)||(37617384-37617462)
chr1 (330-368)||(47899387-47899425)
chr1 (330-423)||(7524192-7524285)
chr1 (456-513)||(10325076-10325133)
chr1 (429-498)||(11049245-11049314)
chr1 (815-868)||(15477443-15477496)
chr1 (346-423)||(15514998-15515075)
chr1 (428-473)||(29759632-29759677)
chr1 (442-495)||(48549046-48549099)
chr1 (762-810)||(30582028-30582076)
chr1 (601-744)||(33186318-33186462)
chr1 (328-368)||(38512453-38512493)
chr1 (344-411)||(4347033-4347100)
chr1 (780-835)||(15942250-15942305)
chr1 (761-828)||(23544719-23544786)
chr1 (345-424)||(28464923-28465002)
chr1 (336-423)||(35961447-35961534)
chr1 (325-376)||(49537195-49537246)
chr1 (606-685)||(50644174-50644253)
chr1 (423-465)||(213552-213594)
chr1 (429-498)||(6574175-6574245)
chr1 (599-641)||(26184859-26184901)
chr1 (441-507)||(29964085-29964151)
chr1 (429-495)||(34387714-34387780)
chr1 (445-514)||(3016142-3016210)
chr1 (423-464)||(17284125-17284166)
chr1 (351-424)||(26382761-26382834)
chr1 (442-552)||(31362239-31362345)
chr1 (330-423)||(32369944-32370037)
chr1 (660-733)||(37473427-37473500)
chr1 (599-688)||(38247396-38247485)
[»] scaffold0361 (1 HSPs)
scaffold0361 (347-514)||(14044-14219)
[»] scaffold0024 (2 HSPs)
scaffold0024 (713-830)||(21311-21426)
scaffold0024 (760-804)||(58885-58929)
[»] scaffold0221 (1 HSPs)
scaffold0221 (676-743)||(22245-22312)
[»] scaffold0172 (1 HSPs)
scaffold0172 (328-411)||(15240-15323)


Alignment Details
Target: chr2 (Bit Score: 870; Significance: 0; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 870; E-Value: 0
Query Start/End: Original strand, 11 - 904
Target Start/End: Original strand, 10618544 - 10619437
Alignment:
Q  11 catcatcaacctctgcaacaccgcagaacttgcattcatctgattctgaagcaacggccccaaacaagtccccggatgaactgcaaccacatccacaccg 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10618544 catcatcaacctctgcaacaccgcagaacttgcattcatctgattctgaagcaacggccccaaacaagtccctggatgaactgcaaccacatccacaccg 10618643  T
Q  111 ctgtgtttctcacaaaactcccacgccgccttctccgcctccgttttcgacacgggataccacttccccctcaacttacagtactcaacatcagtccacg 210  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618644 ctgtgtttctcacaaaactcccacgccaccttctccgcctccgttttcgacacgggataccacttccccctcaacttacagtactcaacatcagtccacg 10618743  T
Q  211 acccctcgtcaatcgccttgttttccggccaattagggtttggtacctgttggagggacaaatttacttgtacttttataaataaataaatatgcaagaa 310  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618744 acccctcgtcaatcgccttgttttccggccaattagggtttggtacctgttggagggacaaatttacttgtacttttataaataaataaatatgcaagaa 10618843  T
Q  311 tggctaaaagtatgtttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 410  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618844 tggctaaaagtatgtttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 10618943  T
Q  411 catttatataaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatca 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10618944 catttatataaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatca 10619043  T
Q  511 attcaagtggaaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggcctagtagaagtgagcaaacatatactagggcctgttt 610  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619044 attcaagtggaaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggcctagtagaagtgagcaaacatatactagggcctgttt 10619143  T
Q  611 ggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttca 710  Q
    ||||||||||||||||||||||||| ||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619144 ggattgactcatttgagtttatctactgacacaagttttgtgagaccccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttca 10619243  T
Q  711 gcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619244 gcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgta 10619343  T
Q  811 tgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaagcatttaagtgcatggatgatattgagaacagtacc 904  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10619344 tgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaagcatttaagtgcatggatgatattgagaacagtacc 10619437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 660 - 802
Target Start/End: Complemental strand, 32592683 - 32592537
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt----- 754  Q
    ||||||||||| ||||||| |||||| | ||||||||   ||| ||| ||| ||||||||||||||| ||||||| | ||||||||| |||||||         
T  32592683 ttgggagaacttatgaaaatagcttacgacaattttcataagcttttctcaacttattttcataagttctccaatattgcttataaaaacaacttatagc 32592584  T
Q  755 gtatgcgaaaacaatttaactttgttttatctttttctataaaaatag 802  Q
    |||| | ||||||||||||| || ||||||||||||||||||||||||    
T  32592583 gtatac-aaaacaatttaacattattttatctttttctataaaaatag 32592537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 599 - 804
Target Start/End: Complemental strand, 26202186 - 26201976
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    ||||||||||||||||| ||| ||||||  ||||||  ||||| ||||||||  ||| || |||  |||| | |||| |||| |||||| ||||||||      
T  26202186 tagggcctgtttggattaacttatttgaacttatctgctgacataagttttgtgagattctttgctagaatttatgagaacaacttatgacaattttcat 26202087  T
Q  699 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta----tgcgaaaacaatttaactttgttttatct-ttttcta 793  Q
     ||| ||||||| ||||||||||||||| ||||||| || |||||||| ||||||| ||    | ||| | ||||||||| || |||||||| ||| |||    
T  26202086 aagcttttttcaacttattttcataagttctccaatatatcttataaaaacaacttatagcagtacgagaccaatttaacgttattttatctctttgcta 26201987  T
Q  794 taaaaatagct 804  Q
    |||||||||||    
T  26201986 taaaaatagct 26201976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 672 - 804
Target Start/End: Original strand, 43279514 - 43279649
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt---gtatgcgaaaacaa 768  Q
    |||||||||||||||| ||||||||   ||| ||||||| |||||||||| |||| ||||||| ||||||||||| |||||||   | || | |||||||    
T  43279514 atgaaaacagcttatgacaattttcataagcttttttcaacttattttcacaagttctccaatatagcttataaaaacaacttatagcatacaaaaacaa 43279613  T
Q  769 tttaactttgttttatctttttctataaaaatagct 804  Q
    ||| || || |||||||||||  |||||||||||||    
T  43279614 tttcacattattttatcttttgatataaaaatagct 43279649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 606 - 754
Target Start/End: Complemental strand, 20952506 - 20952358
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    |||||||||||||| ||||||| |||| || || || ||||||||  |||||  ||  ||||||| |||||||||| ||||| ||||||||   | | ||    
T  20952506 tgtttggattgacttatttgagcttatatactggcaaaagttttgttagactatttaagagaacttatgaaaacagtttatgccaattttcattaacttt 20952407  T
Q  706 tttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||| ||||||||||||||| ||||||| ||||| ||||| |||||||    
T  20952406 tttcaacttattttcataagttctccaatatagctaataaaaacaactt 20952358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 599 - 734
Target Start/End: Complemental strand, 15305832 - 15305697
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    |||||||||||||||||| || ||||||| ||||||||||||| ||||||||  | |||  |||| ||||||  ||| |||| |||||| ||||||||      
T  15305832 tagggcctgtttggattggcttatttgagcttatctattgacataagttttgtgaaactgtttggtagaacttttgacaacaacttatggcaattttcat 15305733  T
Q  699 gagcatttttcagcttattttcataagtactccaat 734  Q
     ||  ||||||| ||||||||||||||| |||||||    
T  15305732 aagtttttttcaacttattttcataagttctccaat 15305697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 762 - 865
Target Start/End: Complemental strand, 36114409 - 36114306
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||||||||||||| |||||||||||   ||||||||||||||| ||| ||| ||||||||||||| ||| | |||||||| || ||||||| || ||    
T  36114409 aaaacaatttaactttattttatcttttgtcataaaaatagctaatatataagcacttatcatgataaacacgtgtactataagctgcaaataacctatt 36114310  T
Q  862 tatc 865  Q
    ||||    
T  36114309 tatc 36114306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 44439324 - 44439230
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaa---ttctaaaggcaaaatcaatt 513  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| || || |||||||||  |||||||||   ||||| ||||||||||||||    
T  44439324 aacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaaattttagcttcaagttagaatcaattcttctagaggcaaaatcaatt 44439230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 704 - 810
Target Start/End: Original strand, 42868483 - 42868589
Alignment:
Q  704 tttttcagcttattttcataagtactccaatctagcttataaacacaacttg-tatgcgaaaacaatttaactttgttttatctttttctataaaaatag 802  Q
    ||||||||||||||||||||||| ||||||| || |||| ||| | | |||  ||| | |||||||||||||||| |||||||||||||||| |||||||    
T  42868483 tttttcagcttattttcataagttctccaatataacttacaaa-atagcttaatatacaaaaacaatttaactttattttatctttttctatgaaaatag 42868581  T
Q  803 ctaatgta 810  Q
    || |||||    
T  42868582 cttatgta 42868589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 599 - 868
Target Start/End: Complemental strand, 2416471 - 2416197
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    |||||| ||||| |||||||| ||||||||||||||| | ||| ||||||||  | ||| ||||| |||||| || |||||||||| ||||| | ||| |    
T  2416471 tagggcatgtttagattgacttatttgagtttatctactaacataagttttgtgaaactgcttggaagaacttattaaaacagcttttgtcattgttcac 2416372  T
Q  699 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttcta 793  Q
     |||   ||||||| || |||||||||| |||  || || |||||||| ||| |||      |||   |||||||||||||||  ||||||||||| |||    
T  2416371 aagctaatttcagcatactttcataagttctcttatataacttataaaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgcta 2416272  T
Q  794 taaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
     | ||||| || ||  || ||| |||| ||||||||| |||| | |||||| ||  ||||||| |||||||||||    
T  2416271 cagaaataacttatacataagcacttaacatgataagaacttgtgctataagctgaaaataagttgtttatccaa 2416197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 754
Target Start/End: Original strand, 15757592 - 15757725
Alignment:
Q  621 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 720  Q
    ||||||| |||| || || || ||||||||  ||||| |||||||||| | |||||||| ||||||| ||||||||   ||| |||||||||||||||||    
T  15757592 atttgagcttatttactggcataagttttgtgagactgcttgggagaatttatgaaaactgcttatgacaattttcagaagcttttttcagcttattttc 15757691  T
Q  721 ataagtactccaatctagcttataaacacaactt 754  Q
    ||| || |||   | ||||||||||| |||||||    
T  15757692 atacgttctcttgtatagcttataaatacaactt 15757725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 599 - 696
Target Start/End: Complemental strand, 30331909 - 30331812
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    |||||| |||||||||||||| |||| || ||||||| ||||| ||||||||  |||||  ||||||||||| ||||||| | |||||| ||||||||    
T  30331909 tagggcttgtttggattgacttatttcagcttatctactgacataagttttgtgagactgtttgggagaacttatgaaaaaaccttatgacaattttc 30331812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 817 - 868
Target Start/End: Original strand, 1633691 - 1633742
Alignment:
Q  817 cttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  1633691 cttatcatgataagcacttctgctataagctgcaaataagctgtttatccaa 1633742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 431 - 513
Target Start/End: Original strand, 3476452 - 3476535
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||| ||| ||||| |||| ||||||||||||||||||||| |||||| ||  |||||||||||||  ||||||||||||||    
T  3476452 atttgaatgtaaaaataaattctagaatcaaaagctctaatttttagctttaagttagaatcaattctggaggcaaaatcaatt 3476535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 756 - 831
Target Start/End: Complemental strand, 4026813 - 4026738
Alignment:
Q  756 tatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagc 831  Q
    ||||| |||| ||||||||||| ||||||||||| |||||||||||||| ||  || ||| |||||||||||||||    
T  4026813 tatgcaaaaataatttaactttattttatcttttgctataaaaatagcttatagataagcacttatcatgataagc 4026738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 36307139 - 36307044
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||||| || |||||||||||| ||||||||||||| | | ||||| ||| ||||| ||||||| | | ||||||||||  ||||||||||||    
T  36307139 aaaattgatcttgagtgaattgattatgtaaaattgattatggataaaagtgagttgaacgtaaagtaattgatgtttgtatgtatttatataaaa 36307044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 602 - 696
Target Start/End: Complemental strand, 42419948 - 42419854
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    ||||| |||||||||||| ||||||||||||||  ||||| |||||||   |||||  ||||||||||| | |||||||||||||| || |||||    
T  42419948 ggcctttttggattgacttatttgagtttatcttctgacataagttttttgagactgtttgggagaacttacgaaaacagcttatgacatttttc 42419854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 762 - 832
Target Start/End: Original strand, 42420374 - 42420444
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagca 832  Q
    ||||||||||||| || ||||||||||| |||||||||||||| ||   | ||||||||||||||||||||    
T  42420374 aaaacaatttaacgttattttatcttttgctataaaaatagcttatacgtaagcgcttatcatgataagca 42420444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 512
Target Start/End: Complemental strand, 42982608 - 42982523
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatc--aattctaaaggcaaaatcaat 512  Q
    ||||||| |||| |||||||||| | ||||||||||||  ||||||||||||||| |||||||  ||||||  |||||||||||||    
T  42982608 aaatttgtgtgtaaaaatcaattctggaatcaaaagctacaatttctagcttcaagtagaatcaaaattctggaggcaaaatcaat 42982523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 359 - 495
Target Start/End: Original strand, 4894099 - 4894244
Alignment:
Q  359 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa---------aacaacaaatttgagtgttaaaatcaa 449  Q
    |||||||||||||||||| | | ||||||||||||||| ||||||||  ||||||| || ||||         || || |||||||||| | | ||||||    
T  4894099 aattgattctagctaaaattaagttgaaggtaaagtgatttatgtttagatacattcatttaaaagtgacttgaataataaatttgagtataataatcaa 4894198  T
Q  450 ttatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    |||||||||||||||||   |||||||| ||||| | |||||||||    
T  4894199 ttatagaatcaaaagctacgatttctagtttcaagttgaatcaatt 4894244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 328 - 417
Target Start/End: Original strand, 11759770 - 11759859
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 417  Q
    |||||||| ||| |||||||||||||||||||||||||| |   ||||| ||| ||||||||||| ||  || |||||||||||| ||||    
T  11759770 aaaattgagtttgagtgaattgattttgtaaaattgattttgattaaaagtgagttgaaggtaaattggtttgtgtttgtatacacttat 11759859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 816 - 868
Target Start/End: Complemental strand, 12795718 - 12795666
Alignment:
Q  816 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||||||||||||||| | ||||||||| ||||||| ||||||||||||    
T  12795718 gcttatcatgataagcacttatgctataaactgcaaataaactgtttatccaa 12795666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 22536049 - 22535977
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| |||| || |||||||||||  || |||||  ||||| ||||||||||||||||||||||||||||||    
T  22536049 aaaattaattctaaaatcaaaagcttcaaattctaaattcaagtagaatcaattctaaaggcaaaatcaattc 22535977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 622 - 801
Target Start/End: Complemental strand, 41851670 - 41851486
Alignment:
Q  622 tttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttca 721  Q
    |||||| ||||||||||||| ||||||||  |||||  ||||||||| | ||| ||||| |||||| || |||||   ||| ||| |||||||| |||||    
T  41851670 tttgagcttatctattgacaaaagttttgtgagactgattgggagaatttatggaaacaacttatgacacttttcataagcttttctcagcttaatttca 41851571  T
Q  722 taagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaata 801  Q
    ||| | ||||||  |||||| | || |||||||      ||| | |||||||||||||||| || |||||||| ||||| |||||    
T  41851570 taaattctccaagatagcttctgaaaacaacttatagcatatacaaaaacaatttaactttattgtatcttttcctatataaata 41851486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 343 - 415
Target Start/End: Original strand, 42774783 - 42774854
Alignment:
Q  343 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattt 415  Q
    ||||||||||||||||||||||||||  |||||||| | ||||||||||| ||  ||||||||| ||||||||    
T  42774783 tgaattgattttgtaaaattgattctgactaaaaataagttgaaggtaaaatggtttatgtttg-atacattt 42774854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 603 - 743
Target Start/End: Complemental strand, 45229665 - 45229525
Alignment:
Q  603 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc 702  Q
    ||||||||||||||  | ||||||| ||||||| || || ||||| ||| | ||   ||||||||||| ||||||| | |||||| || |||||   |||    
T  45229665 gcctgtttggattggttgatttgagcttatctactggcataagttatgccacaccgtttgggagaacttatgaaaagaccttatgacatttttcattagc 45229566  T
Q  703 atttttcagcttattttcataagtactccaatctagcttat 743  Q
     ||||||||||||||||||||||| ||| ||  ||||||||    
T  45229565 ttttttcagcttattttcataagttctcgaagatagcttat 45229525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 743
Target Start/End: Complemental strand, 4607082 - 4606939
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||||||||||||||| || ||||||| |||||||   | | ||||||||  |||||  |||||||||||  |||||||| |||||| || | |||  |    
T  4607082 agggcctgtttggattggcttatttgagcttatctaccaatataagttttgtgagactatttgggagaacttgtgaaaacaacttatgacattgttcatg 4606983  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttat 743  Q
    |||   ||| ||||||||||||||||| ||||||  ||||||||    
T  4606982 agctgcttttagcttattttcataagttctccaagatagcttat 4606939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 789
Target Start/End: Complemental strand, 16451215 - 16451088
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatg 759  Q
    ||||||||||| ||||||||| |||||| || | |||  ||||  |||||||||||||||||  ||| ||||||  |||||||  || ||| ||| |||     
T  16451215 ttgggagaacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttatat- 16451117  T
Q  760 cgaaaacaatttaactttgttttatctttt 789  Q
     ||||||||||||||||  |||||||||||    
T  16451116 -gaaaacaatttaacttcattttatctttt 16451088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 672 - 746
Target Start/End: Complemental strand, 36125446 - 36125372
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    |||||||||||||||  ||||||||   ||| ||||| | ||||||||||||||| ||||||| |||||||||||    
T  36125446 atgaaaacagcttattgcaattttcgtaagctttttttaacttattttcataagttctccaatttagcttataaa 36125372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 42741041 - 42740975
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    |||||||||||| |||||||||| ||||||||||||||  || |  ||||||||| |||||||||||    
T  42741041 aaatttgagtgtaaaaatcaattctagaatcaaaagctacaaatcttagcttcaagtagaatcaatt 42740975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 480
Target Start/End: Original strand, 33961996 - 33962053
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 480  Q
    ||||| |||||||||| | |||||||||||||||||||||| ||| |||||| |||||    
T  33961996 aacaataaatttgagtctaaaaatcaattatagaatcaaaaactccaatttcaagctt 33962053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 431 - 531
Target Start/End: Original strand, 2002718 - 2002818
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 530  Q
    ||||| |||| |||||||||| |||||| |||| ||  || | |||||||||| ||||||||  |||  ||||||||||||||| | | |||||||||||    
T  2002718 atttgtgtgtaaaaatcaattttagaatgaaaaactacaaatcctagcttcaagtagaatcaggtctggaggcaaaatcaattctactagaaagcaacca 2002817  T
Q  531 a 531  Q
    |    
T  2002818 a 2002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 406
Target Start/End: Original strand, 4007116 - 4007192
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||| |||| ||||||||||||||||||||| | | ||||| ||| ||||| | ||||| | |||||||||    
T  4007116 aattgattttaagtggattgattttgtaaaattgattatggataaaagtgagttgaatgaaaagtaatttatgtttg 4007192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 605 - 641
Target Start/End: Original strand, 7103391 - 7103427
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgaca 641  Q
    ||||||||||||||| |||||||||||||||||||||    
T  7103391 ctgtttggattgacttatttgagtttatctattgaca 7103427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 498
Target Start/End: Complemental strand, 12037112 - 12037056
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 498  Q
    |||||||||| ||||||||||||||  || || ||| ||||||||||||||||||||    
T  12037112 aaaatcaattgtagaatcaaaagctacaaattttagtttcaactagaatcaattcta 12037056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Original strand, 12464553 - 12464601
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    |||||||||||||||| ||||||||||||||| | |||||||| |||||    
T  12464553 aaaacaatttaactttattttatctttttctacagaaatagcttatgta 12464601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 603 - 687
Target Start/End: Complemental strand, 27317533 - 27317449
Alignment:
Q  603 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    ||||||||||||||||| ||||||| |||||||  |||| |||||||   |||||  ||| ||||||| ||||||||| ||||||    
T  27317533 gcctgtttggattgacttatttgagcttatctaccgacataagttttatgagactgtttgagagaacttatgaaaacaacttatg 27317449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 437 - 513
Target Start/End: Original strand, 33019185 - 33019261
Alignment:
Q  437 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||| |||||||||| || || ||||||||  || |||||||||||| || ||||||||||| ||||| ||||||||    
T  33019185 gtgtgaaaatcaattctaaaaccaaaagctacaaattctagcttcaaatataatcaattctagaggcagaatcaatt 33019261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 514
Target Start/End: Original strand, 37420216 - 37420303
Alignment:
Q  429 aaatttgagtgttaaaatcaattataga--atcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||| |||||||||| ||||  || | |||||  | ||||||| ||| | |||||||||||||| |||||||||||||||    
T  37420216 aaatttgagtgtaaaaatcaattctagagaattagaagctacattttctagattctagtagaatcaattctagaggcaaaatcaattc 37420303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 868
Target Start/End: Complemental strand, 43570405 - 43570300
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgt 860  Q
    ||||||||||||||||  |||||| |||| ||||| || ||||| ||  |  ||||||||||||||||||  ||| | |||||| || ||||||||||||    
T  43570405 gaaaacaatttaacttcattttatattttactatagaattagcttataca--agcgcttatcatgataagtgcttgtgctataagctgcaaataagctgt 43570308  T
Q  861 ttatccaa 868  Q
    ||| ||||    
T  43570307 ttacccaa 43570300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 801
Target Start/End: Original strand, 423773 - 423812
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaata 801  Q
    |||||||| |||||| ||||||||||||||||||||||||    
T  423773 aaaacaatataacttagttttatctttttctataaaaata 423812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 332 - 367
Target Start/End: Original strand, 5973619 - 5973654
Alignment:
Q  332 ttgatttttagtgaattgattttgtaaaattgattc 367  Q
    |||||||||| |||||||||||||||||||||||||    
T  5973619 ttgatttttaatgaattgattttgtaaaattgattc 5973654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 647
Target Start/End: Original strand, 7928211 - 7928258
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagtt 647  Q
    ||||||||||||||||| || ||||||| ||||||||||||| |||||    
T  7928211 agggcctgtttggattggcttatttgagcttatctattgacataagtt 7928258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 868
Target Start/End: Complemental strand, 9395121 - 9395014
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgt 860  Q
    |||||||||||| |||| ||||||||||||||||| ||| | || ||  ||||| | |||||||||||||  ||| | |||||| |  |||||||||| |    
T  9395121 gaaaacaatttagctttattttatctttttctatagaaaaatcttatacatgagtgtttatcatgataagagcttgtgctataagccgcaaataagctat 9395022  T
Q  861 ttatccaa 868  Q
     |||||||    
T  9395021 gtatccaa 9395014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 12111001 - 12110918
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 411  Q
    |||||||||||| |  ||||||||||||| ||||||||| | | ||||| ||| |||||  |||||||| ||||||||| ||||    
T  12111001 aaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 12110918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 754 - 809
Target Start/End: Complemental strand, 13325568 - 13325513
Alignment:
Q  754 tgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgt 809  Q
    ||||| |||||| ||||||||||| ||||||| |||||||||||| ||||| ||||    
T  13325568 tgtatacgaaaataatttaactttattttatcattttctataaaactagcttatgt 13325513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 21743814 - 21743857
Alignment:
Q  472 ttctagcttcaacta-gaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||    
T  21743814 ttctagcttcaactaagaatcaagtctaaaggcaaaatcaattc 21743857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 423
Target Start/End: Original strand, 680203 - 680296
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||||||| |||||||||||| |||||| |||| |||  || ||| ||| ||||||||||||||  || |||||| ||||||| || |||||    
T  680203 aaattgattttgagtgaattgattatgtaaagttgagtctgtct-aaattgagttgaaggtaaagtgttttgtgtttgcatacattcatgtaaaa 680296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 599 - 641
Target Start/End: Complemental strand, 1830197 - 1830155
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgaca 641  Q
    ||||||||||||||||||||| |||||||||||| || |||||    
T  1830197 tagggcctgtttggattgacttatttgagtttatttactgaca 1830155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 429 - 495
Target Start/End: Complemental strand, 3352140 - 3352074
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    ||||||| |||| |||||||||||||||||||||||||  |||| | | |||||| || ||||||||    
T  3352140 aaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagtaaaatcaatt 3352074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 327 - 413
Target Start/End: Complemental strand, 6767850 - 6767764
Alignment:
Q  327 taaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacat 413  Q
    ||||| ||||||| | | || ||||||||||||||||||| |   ||||||||| ||||| ||||||||| ||| |||| |||||||    
T  6767850 taaaaatgattttgaataaactgattttgtaaaattgattgtgattaaaaatgagttgaatgtaaagtgatttacgtttatatacat 6767764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 660 - 754
Target Start/End: Complemental strand, 12289894 - 12289800
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    |||||||||||  | ||||||| ||||| |||| |||   ||| ||||||| ||||||||||||||| ||||||| ||  ||||||| |||||||    
T  12289894 ttgggagaactattaaaaacagtttatgacaatattcataagcttttttcaacttattttcataagttctccaatataaattataaaaacaactt 12289800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 429 - 479
Target Start/End: Complemental strand, 16488392 - 16488342
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagct 479  Q
    |||||||| ||||| |||||||| ||||||||| ||||| |||||||||||    
T  16488392 aaatttgattgttataatcaattctagaatcaacagctccaatttctagct 16488342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 761 - 807
Target Start/End: Original strand, 18962117 - 18962163
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaat 807  Q
    ||||||| ||||||||| |||||||||||  ||||||||||||||||    
T  18962117 gaaaacagtttaactttattttatcttttgttataaaaatagctaat 18962163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 856
Target Start/End: Complemental strand, 42457938 - 42457844
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 856  Q
    |||||||||||||||| ||||||||||| ||||| |||||| | ||  || |  ||||||||||||| || ||| | |||||| | |||||||||    
T  42457938 aaaacaatttaactttattttatcttttactatagaaatagattatacataaatgcttatcatgataggcgcttgtgctataagccacaaataag 42457844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 689 - 734
Target Start/End: Original strand, 1633494 - 1633539
Alignment:
Q  689 caattttctcgagcatttttcagcttattttcataagtactccaat 734  Q
    |||||||| | ||| ||||||||||||||||||||||| |||||||    
T  1633494 caattttcactagcctttttcagcttattttcataagttctccaat 1633539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 767 - 804
Target Start/End: Complemental strand, 2195946 - 2195909
Alignment:
Q  767 aatttaactttgttttatctttttctataaaaatagct 804  Q
    ||||||||||  ||||||||||||||||||||||||||    
T  2195946 aatttaacttcattttatctttttctataaaaatagct 2195909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 815 - 868
Target Start/End: Original strand, 15757809 - 15757862
Alignment:
Q  815 cgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||| ||| | |||||| ||  |||||||||||||||||||    
T  15757809 cgcttatcatgataagcgcttgtgctataagctgaaaataagctgtttatccaa 15757862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 754
Target Start/End: Complemental strand, 40279319 - 40279270
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||| |||||||||||| ||||||| |||||||| || |||||||    
T  40279319 ttttcagctaattttcataagttctccaatatagcttatgaaaacaactt 40279270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 754
Target Start/End: Complemental strand, 40279389 - 40279340
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||| |||||||||||| ||||||| |||||||| || |||||||    
T  40279389 ttttcagctaattttcataagttctccaatatagcttatgaaaacaactt 40279340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 754
Target Start/End: Complemental strand, 40279459 - 40279410
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    |||||| ||||||||||||||| ||||||| |||||||| || |||||||    
T  40279459 ttttcaacttattttcataagttctccaatatagcttatgaaaacaactt 40279410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 799
Target Start/End: Complemental strand, 40835524 - 40835487
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaa 799  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  40835524 aaaacaattcaactctgttttatctttttctataaaaa 40835487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 603 - 684
Target Start/End: Complemental strand, 44590178 - 44590097
Alignment:
Q  603 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 684  Q
    |||| ||||||||| || |||||||||||||||| |||| ||||||||  ||||   |||  |||||| |||||||||||||    
T  44590178 gcctctttggattggcttatttgagtttatctatagacataagttttgtgagaccgtttgaaagaacttatgaaaacagctt 44590097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 7e-30; HSPs: 47)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 1485161 - 1485252
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||| |||||    
T  1485161 aacaataaatttgagtgttaaaatcaattctagaatcaaaagctccaatttctagattcaagtagaatcaattctaaaggcaaaattaattc 1485252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 363 - 572
Target Start/End: Complemental strand, 34621025 - 34620807
Alignment:
Q  363 gattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattat 453  Q
    |||||| |||| || ||| ||||||||||||||| ||||||||| |||||||||| |||||         | || |||||| ||||| |||||||||| |    
T  34621025 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34620926  T
Q  454 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctacc 553  Q
    ||||||| ||||| | |||||||||||||  ||||||||||||   ||||||||| ||||| |||  | || |||||||| ||| | | ||||||||||     
T  34620925 agaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtcaaaatcaattctaca 34620826  T
Q  554 gctatagaatcaattttgg 572  Q
     || |||||||||||||||    
T  34620825 cctttagaatcaattttgg 34620807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 363 - 572
Target Start/End: Complemental strand, 34748462 - 34748244
Alignment:
Q  363 gattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattat 453  Q
    |||||| |||| || ||| ||||||||||||||| ||||||||| |||||||||| |||||         | || |||||| ||||| |||||||||| |    
T  34748462 gattctggctagaattgagttgaaggtaaagtgatttatgtttggatacatttatgtaaaagtgagttgaaaaataaattttagtgtaaaaatcaattct 34748363  T
Q  454 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctacc 553  Q
    ||||||| ||||| | |||||||||||||  ||||||||||||   ||||||||| ||||| |||  | || |||||||| ||| | | ||||||||||     
T  34748362 agaatcagaagctatgatttctagcttcatgtagaatcaattccggaggcaaaattaattctagtttataggaaccaaacatgtcaaaatcaattctaca 34748263  T
Q  554 gctatagaatcaattttgg 572  Q
     || |||||||||||||||    
T  34748262 cctttagaatcaattttgg 34748244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 429 - 571
Target Start/End: Complemental strand, 2234579 - 2234437
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    ||||||||||||||||||||||| ||||||||||||||  | ||| ||||||||| | ||||||||| | |||||||||||||||| | | ||||| ||     
T  2234579 aaatttgagtgttaaaatcaattctagaatcaaaagcttcagtttttagcttcaagttgaatcaattttgaaggcaaaatcaattctactcgaaagtaat 2234480  T
Q  529 caaacttgttatactcaattctaccgctatagaatcaattttg 571  Q
    | ||| ||||  | ||| ||||||   ||||||||||||||||    
T  2234479 cgaacatgtttgaatcagttctacacttatagaatcaattttg 2234437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 760 - 868
Target Start/End: Complemental strand, 264363 - 264255
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 859  Q
    ||||||| |||||||||| ||||||||||| || || |||||||| || ||| ||| ||||||||||||||||||| | |||||| || ||||| |||||    
T  264363 cgaaaacgatttaactttattttatcttttgctttagaaatagcttatatataagcacttatcatgataagcacttgtgctataagctgcaaattagctg 264264  T
Q  860 tttatccaa 868  Q
    || ||||||    
T  264263 ttaatccaa 264255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 599 - 724
Target Start/End: Complemental strand, 848146 - 848022
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    |||||||||||||||||| || ||||||| |||||||| | || ||||||||  |||||  |||| |||||| || ||||| ||||||| || ||||||     
T  848146 tagggcctgtttggattgccttatttgagcttatctatag-cataagttttgtgagactgtttggaagaacttataaaaactgcttatgacatttttctt 848048  T
Q  699 gagcatttttcagcttattttcataa 724  Q
     ||| |||||||||||||||||||||    
T  848047 aagcttttttcagcttattttcataa 848022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 1500074 - 1499979
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||||| | |||||||||||||||||||||||| | |||||||  || ||||  ||||| ||| ||||||||| |||||||||| |||||    
T  1500074 aaaattgattttgactgaattgattttgtaaaattgattttggctaaaagcgagttgagtgtaaattgatttatgtttgaatacatttatgtaaaa 1499979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 507
Target Start/End: Original strand, 30926793 - 30926878
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaa 507  Q
    ||||| |||||||||||| |||||||||| |||||| |||| ||| |||||||||||||||  ||||||| ||||||||| |||||    
T  30926793 aacaataaatttgagtgtaaaaatcaattctagaataaaaaactccaatttctagcttcaagttagaatccattctaaagccaaaa 30926878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 328 - 483
Target Start/End: Complemental strand, 9505944 - 9505780
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---- 423  Q
    |||||||||||| | |||||||||| |||||| || ||| | ||||||| ||| ||||||| |||||||  ||||||  |||| ||| || |||||        
T  9505944 aaaattgattttgaatgaattgattctgtaaagtttattttggctaaaattgagttgaaggcaaagtgatatatgttattatatattcatgtaaaagtgt 9505845  T
Q  424 -----acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
         |||| |||||||||| | ||||||||| |||||||||||||||| |||||||| ||||||    
T  9505844 gttgaacaataaatttgagtttaaaaatcaatcatagaatcaaaagctccaatttctatcttcaa 9505780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 763 - 830
Target Start/End: Complemental strand, 4163164 - 4163097
Alignment:
Q  763 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| | || | |||||||||||||    
T  4163164 aaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4163097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 763 - 830
Target Start/End: Complemental strand, 4224785 - 4224718
Alignment:
Q  763 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    ||||||||||||||| |||||||| ||||||||||||||||| |||| | || | |||||||||||||    
T  4224785 aaacaatttaactttattttatctatttctataaaaatagcttatgtgtaagtgtttatcatgataag 4224718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 431 - 574
Target Start/End: Original strand, 5724653 - 5724796
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 530  Q
    ||||| |||| ||||||||||||||||| ||||| |  || | |||||||||| ||||||||||| |  ||||||||||||||| |   ||||||| |||    
T  5724653 atttgtgtgtaaaaatcaattatagaataaaaagttacaaatcctagcttcaagtagaatcaattttggaggcaaaatcaattctacctgaaagcatcca 5724752  T
Q  531 aacttgttatactcaattctaccgctatagaatcaattttggcc 574  Q
    ||| ||| | | ||||||||||   | |||||| ||||||||||    
T  5724753 aacatgtcagaatcaattctacacttctagaattaattttggcc 5724796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 423 - 497
Target Start/End: Complemental strand, 34898766 - 34898691
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag-ctctaatttctagcttcaactagaatcaattct 497  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||  ||||||||||||||||||| ||||||| |||||    
T  34898766 aacaataaattcgagtgttaaaatcaattctagaataaaaaaactctaatttctagcttcaagtagaatcgattct 34898691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 601 - 745
Target Start/End: Original strand, 35070568 - 35070708
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    |||||||||||||||| || ||||||| ||| ||| || ||||||| |||  |||||    | ||||||| | |||||||||||||| |||||||| | |    
T  35070568 gggcctgtttggattggcttatttgagcttacctactggcacaagtcttgtgagact----gagagaacttacgaaaacagcttatgacaattttcacaa 35070663  T
Q  701 gcatttttcagcttattttcataagtactccaatctagcttataa 745  Q
    || |||||  |||| ||||||||||| ||||||  ||||||||||    
T  35070664 gcttttttgggcttgttttcataagttctccaaaatagcttataa 35070708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 760 - 830
Target Start/End: Original strand, 9093634 - 9093704
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    |||||||||||||||||| |||||||||||  |||| |||||||| ||  || ||||||||||||||||||    
T  9093634 cgaaaacaatttaactttattttatcttttgatatagaaatagcttatccataagcgcttatcatgataag 9093704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 606 - 680
Target Start/End: Original strand, 10645304 - 10645378
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaaca 680  Q
    ||||||||||| || ||||||| ||||||| ||||| |||||||| ||||||  ||||||||||| |||||||||    
T  10645304 tgtttggattggctaatttgaggttatctaatgacataagttttgtaagactgtttgggagaacttatgaaaaca 10645378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 469 - 531
Target Start/End: Original strand, 35098235 - 35098297
Alignment:
Q  469 aatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaa 531  Q
    ||||||||||||||| ||||||||||| |  ||||||||||||||| ||| ||||||||||||    
T  35098235 aatttctagcttcaattagaatcaattttgtaggcaaaatcaattctagttgaaagcaaccaa 35098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 341 - 406
Target Start/End: Complemental strand, 7953144 - 7953079
Alignment:
Q  341 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||||| || |||||||||||| || |||| ||| ||||||||||||||| |||||||||    
T  7953144 agtgaattgattatgaaaaattgattctggccaaaattgagttgaaggtaaagtgatttatgtttg 7953079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 46201 - 46285
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||||| |||||||||||| |||||||||||||||| |||||| ||| ||| |  |||||| | || |||||| |||||||    
T  46201 aattgattttgagtgaattgattctgtaaaattgattctaactaaaagtgagttgcaattaaagttatttgtgtttggatacatt 46285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 765298 - 765382
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||||| |||||| ||||| |||||||||||||||| |||||| | | ||||| ||||||||| || |||||  |||||||    
T  765298 aattgattttgagtgaaatgattgtgtaaaattgattctaactaaaagtaagttgaaagtaaagtgatttgtgtttccatacatt 765382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 480
Target Start/End: Complemental strand, 10874555 - 10874507
Alignment:
Q  432 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 480  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  10874555 tttgaatgtaaaaatcaattctagaatcaaaagctctaatttctagctt 10874507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 3436796 - 3436871
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 405  Q
    |||||||||||||||| |||||||| |||||||||||  | ||||||| ||||| | |||| ||||| ||||||||    
T  3436796 aattgatttttagtgagttgattttataaaattgatttcaactaaaaaagaatttacggtatagtgatttatgttt 3436871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 483
Target Start/End: Original strand, 31305868 - 31305922
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    ||||||||||||  ||||||||| ||||||||||||||| ||||| |||||||||    
T  31305868 aaatttgagtgtataaatcaattctagaatcaaaagctccaatttttagcttcaa 31305922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 687
Target Start/End: Complemental strand, 6538672 - 6538584
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    |||||||||||||||||| || |||||||||||| || || || |||||| |  |||||  | ||||||| | ||||||||||||||||    
T  6538672 tagggcctgtttggattgtcttatttgagtttatgtagtggcataagtttggtgagactgttcgggagaattgatgaaaacagcttatg 6538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 8147692 - 8147644
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||| |||||| ||||||||||| |||||||||||||| |||||    
T  8147692 aaaacaattcaactttattttatcttttgctataaaaatagcttatgta 8147644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 760 - 864
Target Start/End: Original strand, 9559619 - 9559723
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 859  Q
    |||||||||||||| ||| ||||||||||| ||||| ||||| || ||  || |||||||||| |||||| | |||   ||||||||| |||||| | ||    
T  9559619 cgaaaacaatttaaatttattttatcttttgctatagaaataacttatacataagcgcttatcttgataaactcttgagctataaactgcaaataggttg 9559718  T
Q  860 tttat 864  Q
    |||||    
T  9559719 tttat 9559723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 24626285 - 24626237
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    |||||||||||||||||||||||| ||| ||||| |||||||| |||||    
T  24626285 aaaacaatttaactttgttttatcctttcctatagaaatagcttatgta 24626237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 26280656 - 26280584
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||| | ||||||||| ||  || |||||||||||| | |||||||||||  |||||||||||||||    
T  26280656 aaaatcaattttggaatcaaaaactacaaattctagcttcaagtggaatcaattcttgaggcaaaatcaattc 26280584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 766 - 810
Target Start/End: Complemental strand, 31623546 - 31623502
Alignment:
Q  766 caatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||    
T  31623546 caatttaacgtcattttatctttttctataaaaatagctaatgta 31623502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 34404638 - 34404726
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    ||||| ||||||||||| ||| ||||||||||||| | ||||| ||||||||   || || ||||||||||| ||||||| | ||||||    
T  34404638 taggggctgtttggatttacttatttgagtttatcaactgacataagttttgtgtgagtctttgggagaacttatgaaaatatcttatg 34404726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Original strand, 35070710 - 35070758
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    |||||||||| | ||| |||||||||||||||||||||||||| |||||    
T  35070710 aaaacaattttattttattttatctttttctataaaaatagcttatgta 35070758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 513
Target Start/End: Complemental strand, 852603 - 852512
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||| | ||||| |||| |||||||||| |||||||| || ||  ||||||||||||||| | ||||||||| |  ||||||||| ||||    
T  852603 aaacaatacatttgggtgtaaaaatcaattctagaatcagaacctacaatttctagcttcaagttgaatcaattatggaggcaaaataaatt 852512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 359 - 414
Target Start/End: Complemental strand, 882829 - 882774
Alignment:
Q  359 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||||||| ||||| ||| ||||||||||| ||| ||||||||| |||||||    
T  882829 aattgattctagttaaaattgagttgaaggtaaaatgatttatgtttggatacatt 882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 3525099 - 3525004
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||| ||||| | |||||||||| ||||||||||||| | ||||||| ||| ||||| | ||| ||  |||| |||| |||||||||| |||||    
T  3525099 aaaattaattttgaatgaattgattatgtaaaattgattgtggctaaaagtgagttgaatgcaaactggtttatatttgaatacatttatgtaaaa 3525004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 420
Target Start/End: Complemental strand, 22692714 - 22692639
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatata 420  Q
    |||||||||||||||||||| ||| || |||| |||||| ||  |||||||| ||||| ||| || ||||||||||    
T  22692714 aattgattttgtaaaattgaatcttgcgaaaagtgaattaaatttaaagtgatttatgcttgcatgcatttatata 22692639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 442 - 571
Target Start/End: Original strand, 10400729 - 10400859
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagc-aaccaaacttgttat 540  Q
    |||||||||| |||||||||| |||  || | ||| ||||||||||||| |||||||  ||||||| |||||| | | |||||| |||||||| | | |     
T  10400729 aaaatcaattttagaatcaaaggctagaaatcctaacttcaactagaattaattctagtggcaaaaacaattctactcgaaagcaaaccaaacatatcaa 10400828  T
Q  541 actcaattctaccgctatagaatcaattttg 571  Q
    | |||||| |||  || ||||||||||||||    
T  10400829 aatcaattatacacctctagaatcaattttg 10400859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 20871673 - 20871627
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaa 376  Q
    |||||||||||| |||||||||| ||||||||||||| ||| |||||    
T  20871673 aattgatttttattgaattgattgtgtaaaattgattttagataaaa 20871627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 601 - 635
Target Start/End: Original strand, 30536879 - 30536913
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatcta 635  Q
    ||||||||||||||||||| |||||||||||||||    
T  30536879 gggcctgtttggattgacttatttgagtttatcta 30536913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 443 - 511
Target Start/End: Original strand, 3436917 - 3436986
Alignment:
Q  443 aaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct-aaaggcaaaatcaa 511  Q
    |||||||||||||||||||||| |  || || ||| ||||||||||||||||| | ||| ||||||||||    
T  3436917 aaatcaattatagaatcaaaagttacaaattatagattcaactagaatcaattttgaaaagcaaaatcaa 3436986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 4910972 - 4910887
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||  ||| |||||||||| ||||||||||||||  || |  ||||||||| ||||||||||| |  ||||| |||||||||    
T  4910972 aaatttgtatgtgaaaatcaattctagaatcaaaagctacaaatcatagcttcaagtagaatcaatttttgaggcagaatcaattc 4910887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 513
Target Start/End: Original strand, 6544543 - 6544604
Alignment:
Q  453 tagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaatt 513  Q
    |||| ||||||||||  | |||||||||||| | |||||||||||| |||||||||||||||    
T  6544543 tagagtcaaaagctccgagttctagcttcaagttagaatcaattctgaaggcaaaatcaatt 6544604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 437 - 514
Target Start/End: Original strand, 6654119 - 6654196
Alignment:
Q  437 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||| |||||||| | |||||| |||||||  || | |||||||||| |||||| |||||| |||| |||||||||||    
T  6654119 gtgtgaaaatcaaatctagaattaaaagctacaaatcctagcttcaagtagaattaattctgaaggaaaaatcaattc 6654196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 742
Target Start/End: Original strand, 31624959 - 31624996
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagctta 742  Q
    |||||||||||||||||||||| ||||||| |||||||    
T  31624959 ttttcagcttattttcataagttctccaatatagctta 31624996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 761 - 790
Target Start/End: Original strand, 31671153 - 31671182
Alignment:
Q  761 gaaaacaatttaactttgttttatcttttt 790  Q
    ||||||||||||||||||||||||||||||    
T  31671153 gaaaacaatttaactttgttttatcttttt 31671182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 831
Target Start/End: Complemental strand, 33117532 - 33117463
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagc 831  Q
    |||||||||||||||  |||||| |||| |||||||| ||||| ||| || || |||||| |||||||||    
T  33117532 aaaacaatttaacttaattttatattttgctataaaagtagcttatgcataagtgcttattatgataagc 33117463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 429 - 466
Target Start/End: Original strand, 34027438 - 34027475
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagct 466  Q
    |||||||||||| |||||||||| ||||||||||||||    
T  34027438 aaatttgagtgtaaaaatcaattctagaatcaaaagct 34027475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 657
Target Start/End: Original strand, 35069525 - 35069582
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagact 657  Q
    |||||||||||| |||| || ||||||| ||||||| ||||| |||||||| ||||||    
T  35069525 agggcctgtttgtattggcttatttgagcttatctactgacataagttttgtaagact 35069582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 7e-30; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 330 - 492
Target Start/End: Original strand, 35264324 - 35264495
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa----- 424  Q
    |||||||||| |||||||||||| ||||||||||||| || | |||| ||| ||||| ||||||||| |||||||||  |||||| || ||||||         
T  35264324 aattgattttgagtgaattgattctgtaaaattgattgtaaccaaaagtgagttgaaagtaaagtgagttatgtttgggtacattcatgtaaaaatgact 35264423  T
Q  425 ----caacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatca 492  Q
        ||| |||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||    
T  35264424 tgaacaataaatttaagtgttaaaatcaattctagaatcaaaagctctaatttctagtttcaagtagaatca 35264495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 431 - 514
Target Start/End: Complemental strand, 35058423 - 35058340
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||||||||||||  |||||||||||||||    
T  35058423 atttgagtgttaaaatcaattctagaatcaaaagctcgaatttctagctccaagtagaatcaattcttgaggcaaaatcaattc 35058340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 602 - 862
Target Start/End: Original strand, 402457 - 402721
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    ||||||||||| |||||  ||||||||||||| | | ||| |||||||||||||||  ||||||||||  |||||||||||||||| || | |||   ||    
T  402457 ggcctgtttgggttgacctatttgagtttatcaactaacataagttttgcaagactgtttgggagaacgtatgaaaacagcttatgacattgttcataag 402556  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataa 796  Q
    |  ||||||||||| ||||| |||| || |||  ||| ||||||| ||| |||      ||| |||||||||||||| |||   |||||||||||||||     
T  402557 ctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaacaatttaaattt-aattatctttttctatag 402655  T
Q  797 aaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttt 862  Q
    |||||||| ||  || ||| ||||||||||||||||||| | |||| | || |||||||| |||||    
T  402656 aaatagcttatacataagcccttatcatgataagcacttgtgctatgagctgcaaataagttgttt 402721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 332 - 513
Target Start/End: Original strand, 37334949 - 37335139
Alignment:
Q  332 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa--------- 422  Q
    |||||||| |||||||||||| | ||||||||||||   |||||| ||| ||||||||||||||| |||||| || ||||||| |||||||             
T  37334949 ttgattttaagtgaattgattatataaaattgattccgactaaaattgagttgaaggtaaagtgatttatgtctgaatacattcatataaaaatgagttg 37335048  T
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||  ||||  ||||| |||||||||| ||||||||||||||   ||||||| |||| | || ||||||||||  ||||||||||||||    
T  37335049 aacaatgaattcaagtgtaaaaatcaattctagaatcaaaagctacgatttctaacttctagtaaaatcaattctcgaggcaaaatcaatt 37335139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 606 - 810
Target Start/End: Complemental strand, 20880627 - 20880419
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    ||||||||||| || ||||||| ||||||| |  || ||||||    |||||  ||||||||||  |||||||||||||||| ||||||||   ||| ||    
T  20880627 tgtttggattggcttatttgagcttatctacttgcataagtttccttagactatttgggagaacctatgaaaacagcttatgacaattttcataagcttt 20880528  T
Q  706 tttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaat 800  Q
    ||| ||||||||||||||||| ||||||| |||||| |||| |||  ||      ||| | ||||||||||||| |||||||||| ||| ||||||||||    
T  20880527 tttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaacaatttaac-ttgttttatcatttgctataaaaat 20880429  T
Q  801 agctaatgta 810  Q
    |||| |||||    
T  20880428 agcttatgta 20880419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 423 - 514
Target Start/End: Complemental strand, 36302253 - 36302162
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| |||||| |||| ||||||||||| || |||||||| ||| ||| ||||||||||| ||||||||| ||| ||||||||||||||||    
T  36302253 aacaataaatttaagtgctaaaatcaattctaaaatcaaaatctccaatctctagcttcaaatagaatcaactctgaaggcaaaatcaattc 36302162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 44958621 - 44958712
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| ||| |||||||||||||||| || ||||||||||||||| |||||||||| || | ||||||||| |||  |||||||||||||||    
T  44958621 aacaataaagttgagtgttaaaatcatttctagaatcaaaagctccaatttctagcatcgagtagaatcaactctggaggcaaaatcaattc 44958712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 672 - 746
Target Start/End: Complemental strand, 30443978 - 30443904
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    |||||||||||||||| |||||||| | ||| ||||||||||||||||||||||| ||||||| ||| |||||||    
T  30443978 atgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaa 30443904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 334 - 390
Target Start/End: Complemental strand, 50427240 - 50427184
Alignment:
Q  334 gatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggta 390  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  50427240 gattttaagtgaattgaatttgtaaaattgattctagctaaaaatgagttgaaggta 50427184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 660 - 782
Target Start/End: Complemental strand, 21367764 - 21367637
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt----- 754  Q
    ||||||||||| |||||||||||||||| || | ||| | |||  |||||||||||||||||||||| ||||||  |||||||| || |||||||         
T  21367764 ttgggagaacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttataca 21367665  T
Q  755 gtatgcgaaaacaatttaactttgtttt 782  Q
     ||| |||||||||||||||||| ||||    
T  21367664 ttatacgaaaacaatttaactttatttt 21367637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 599 - 754
Target Start/End: Complemental strand, 39980887 - 39980732
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    ||||| |||||||||||| ||  |||||| ||||||| |  || ||||||||  |||||  ||  ||||||| |||||||||||||||| |   ||||      
T  39980887 tagggtctgtttggattggcttgtttgagcttatctactagcataagttttgtgagactgtttaagagaacttatgaaaacagcttatgactggtttcat 39980788  T
Q  699 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
     ||| ||||||| ||||||||||||||| ||||||| ||||||||||| |||||||    
T  39980787 aagcttttttcaacttattttcataagttctccaatatagcttataaaaacaactt 39980732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 610 - 724
Target Start/End: Original strand, 31365111 - 31365225
Alignment:
Q  610 tggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttc 709  Q
    ||||||| || ||||||| |||||||||| || ||||||||  |||||  ||||||||||| |||||| ||||||||| ||||||||   ||| ||||||    
T  31365111 tggattggcttatttgagcttatctattggcataagttttgtgagactgtttgggagaacttatgaaagcagcttatgacaattttcataagcttttttc 31365210  T
Q  710 agcttattttcataa 724  Q
    | || ||||||||||    
T  31365211 aactcattttcataa 31365225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 30301013 - 30301105
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag-ctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| ||||||||||||||||| ||||| |||||| ||||  ||| ||||||||||||||| |||| |||||| |  |||||||||||||||    
T  30301013 aacaataaatttgagtgttaaaaccaattctagaattaaaaaactccaatttctagcttcaaatagagtcaattttggaggcaaaatcaattc 30301105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 436 - 508
Target Start/End: Original strand, 40147878 - 40147950
Alignment:
Q  436 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaat 508  Q
    |||||| ||||||||| ||||||||||||||| || ||||||||| || ||||||||||||| ||| ||||||    
T  40147878 agtgttgaaatcaattctagaatcaaaagctccaaattctagcttgaagtagaatcaattctgaagacaaaat 40147950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 336 - 423
Target Start/End: Original strand, 584712 - 584799
Alignment:
Q  336 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||| |||||||||||||||||||||||||| ||||||||| | | |||||| ||||  || || |||||| |||||||||| |||||    
T  584712 ttttgagtgaattgattttgtaaaattgattttagctaaaattaagttgaagctaaatggatttctgtttggatacatttatgtaaaa 584799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 760 - 830
Target Start/End: Original strand, 34638042 - 34638113
Alignment:
Q  760 cgaaaacaatttaactttg-ttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    ||||||||||||||||||  ||||||||||||||||| |||||||| || ||| |||| |||||||||||||    
T  34638042 cgaaaacaatttaactttaattttatctttttctatagaaatagcttatatataagcggttatcatgataag 34638113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 666 - 804
Target Start/End: Original strand, 36631030 - 36631173
Alignment:
Q  666 gaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgc 760  Q
    ||||| |||||| ||||||||| | ||||||   ||| |||||| |||||||||||||||| ||||||| ||||| ||||| ||||||| ||     | |    
T  36631030 gaacttatgaaaccagcttatgacgattttcaaaagcttttttctgcttattttcataagttctccaatatagctcataaaaacaacttatagcatgtac 36631129  T
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
     ||||||||||||||||  |||||| ||| ||||| ||||||||    
T  36631130 aaaaacaatttaactttactttatcctttactatagaaatagct 36631173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 672 - 830
Target Start/End: Complemental strand, 43062776 - 43062618
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtat-gcgaaaacaatt 770  Q
    ||||||||||  |||| |||||||| | ||| ||||||||||| ||||||||||| ||||||| || ||| |||| ||| |||||||  |  ||||| ||    
T  43062776 atgaaaacagtatatggcaattttcacaagcttttttcagcttcttttcataagttctccaatata-cttgtaaaaacagcttgtatcacacaaacattt 43062678  T
Q  771 taactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
     |||  |||||||||||||||| ||||||| ||| ||| || ||| ||||||| ||||||    
T  43062677 aaacgatgttttatctttttctttaaaaatggcttatgcataagcacttatcacgataag 43062618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 31766160 - 31766242
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 412  Q
    |||||||||| | |||||||||||||||||||| ||| | | ||||| ||| |||||| |||||||| ||||||||| |||||    
T  31766160 aattgattttgaatgaattgattttgtaaaattaattttggataaaagtgagttgaagttaaagtgatttatgtttggataca 31766242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 329 - 423
Target Start/End: Complemental strand, 32112167 - 32112073
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||||||| |||||||||||| ||||||||||||| | | ||||||||| ||||| | ||||| | ||||||||| ||  |||||| |||||    
T  32112167 aaattgattttgagtgaattgattatgtaaaattgattatggataaaaatgagttgaatgaaaagtaatttatgtttggatttatttatgtaaaa 32112073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 770 - 868
Target Start/End: Original strand, 34235164 - 34235262
Alignment:
Q  770 ttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||| |||||| |||| ||||  ||||||||  |  || || |||||||||||||||||| | |||||||| ||||||||||| |||||||||||    
T  34235164 ttaactttattttatattttgctatggaaatagcttctacataagtgcttatcatgataagcacatgtactataagctacaaataagttgtttatccaa 34235262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 598 - 751
Target Start/End: Complemental strand, 902082 - 901930
Alignment:
Q  598 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttct 697  Q
    |||||| ||||||||||||  | ||||||| ||||||| || || |||||||||  | ||  |||||| |||| |||||||||||| ||  || ||| |     
T  902082 ctagggtctgtttggattgctttatttgagcttatctagtg-cagaagttttgcgtggctgtttgggaaaacttatgaaaacagctaataacattttcca 901984  T
Q  698 cgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
      ||| ||||||| ||||||||||||||| ||||||| ||||||||||| ||||    
T  901983 taagcttttttcaacttattttcataagttctccaatatagcttataaaaacaa 901930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 359 - 491
Target Start/End: Complemental strand, 3776665 - 3776524
Alignment:
Q  359 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa---------caacaaatttgagtgttaaaatcaa 449  Q
    |||||||||| ||||||| ||| ||||| ||||||||| ||||| ||| ||||||| || |||||          |||||||||||||||| ||||| ||    
T  3776665 aattgattctggctaaaattgagttgaatgtaaagtgatttatgcttggatacattgatgtaaaagtgagttcagcaacaaatttgagtgtaaaaattaa 3776566  T
Q  450 ttatagaatcaaaagctctaatttctagcttcaactagaatc 491  Q
    || |||||||| |||||  ||||||||| ||||| |||||||    
T  3776565 ttctagaatcagaagctacaatttctagattcaagtagaatc 3776524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 42644379 - 42644302
Alignment:
Q  330 aattgatttttagtgaattgattttgt-aaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||| |||||||||||||| | |||||||||| ||| ||||| ||| ||||| ||||||||| |||||||||    
T  42644379 aattgattttgagtgaattgattttataaaaattgattttagttaaaagtgagttgaatgtaaagtgatttatgtttg 42644302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 51285641 - 51285580
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    ||||||||||||||||||  |||||||||| |||||||||||||| | |||| |||||||||    
T  51285641 aaacaacaaatttgagtgcaaaaatcaattctagaatcaaaagctgtgatttttagcttcaa 51285580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 454 - 514
Target Start/End: Original strand, 7717367 - 7717427
Alignment:
Q  454 agaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||| |||||  ||||||||||||||| |||||||||||||  |||||||||||||||    
T  7717367 agaatcagaagctacaatttctagcttcaagtagaatcaattctggaggcaaaatcaattc 7717427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 760 - 868
Target Start/End: Complemental strand, 31403350 - 31403242
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 859  Q
    |||||||| ||||||||  |||||||||||  |||  |||||||| || ||| || |||||| |||||||||||||   ||| ||||| ||||||| |||    
T  31403350 cgaaaacattttaacttcattttatcttttgatatggaaatagcttatatataagtgcttatgatgataagcacttgggctagaaactgcaaataacctg 31403251  T
Q  860 tttatccaa 868  Q
    |||||||||    
T  31403250 tttatccaa 31403242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 439 - 514
Target Start/End: Original strand, 41115392 - 41115468
Alignment:
Q  439 gttaaaatcaattatagaatc-aaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||||||||| ||||| | |||||||  || |||||||||||| |||||||||||||| | |||||||||||||    
T  41115392 gttaaaatcaattgtagaagccaaaagctacaaattctagcttcaagtagaatcaattctacaagcaaaatcaattc 41115468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 423 - 467
Target Start/End: Original strand, 46853549 - 46853593
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctc 467  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  46853549 aacaataaatttgagtgttaaaatcaattctagaatcaaaagctc 46853593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 604 - 687
Target Start/End: Original strand, 9832672 - 9832755
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    ||||||| |||||||| ||||||| |||| |||||||| ||||||||  | |||  |||||||||||  |||||||||||||||    
T  9832672 cctgtttagattgacttatttgagcttatttattgacataagttttgtcaaactgtttgggagaacttttgaaaacagcttatg 9832755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 25359589 - 25359679
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||| |||| || |||| ||||||||||||||||| |||| ||  || ||||| |||||| |||||||||||||  ||||| ||||||||    
T  25359589 aacaataaatatgtgtgtgaaaatcaattatagaataaaaaactacaaattctaacttcaagtagaatcaattctggaggcagaatcaatt 25359679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 610 - 696
Target Start/End: Original strand, 31365232 - 31365318
Alignment:
Q  610 tggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    ||||||| || |||||||||||||||||| || || |||||  | |||  ||||||||||| ||||| |||||||||| ||||||||    
T  31365232 tggattggcttatttgagtttatctattggcataatttttgtgacactgtttgggagaacttatgaatacagcttatgacaattttc 31365318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 345 - 411
Target Start/End: Original strand, 52925551 - 52925617
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 411  Q
    ||||||||||||||||||||||||  |||||| ||| ||||| ||||||||  ||||||||| ||||    
T  52925551 aattgattttgtaaaattgattctcactaaaattgagttgaaagtaaagtggtttatgtttggatac 52925617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 341 - 414
Target Start/End: Original strand, 1441331 - 1441404
Alignment:
Q  341 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||| |||||||||||||||||||  |||||| ||| ||||| ||||||||| || |||||  |||||||    
T  1441331 agtgaattaattttgtaaaattgattctgtctaaaagtgagttgaacgtaaagtgatttgtgtttagatacatt 1441404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 650
Target Start/End: Original strand, 25447163 - 25447208
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    ||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  25447163 ctgtttggattgacttatttgagtttatctactgacataagttttg 25447208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 406
Target Start/End: Original strand, 25577696 - 25577757
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||||| |||||||||| || ||||  ||||||||||||||||| | |||||||||    
T  25577696 aattgattttgtgaaattgattcaagataaacttgaattgaaggtaaagttatttatgtttg 25577757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 868
Target Start/End: Original strand, 30956706 - 30956822
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgt----------atgagcgcttatcatgataagcacttctactataaactacaa 851  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||||          || |  |||||||||||||||| ||| | |||||| || |||    
T  30956706 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaa 30956805  T
Q  852 ataagctgtttatccaa 868  Q
    |||||||||||||||||    
T  30956806 ataagctgtttatccaa 30956822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 762 - 868
Target Start/End: Original strand, 30972518 - 30972634
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgt----------atgagcgcttatcatgataagcacttctactataaactacaa 851  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||||          || |  |||||||||||||||| ||| | |||||| || |||    
T  30972518 aaaacaatttaactttattttatcttttgctatagaaatagcttatgtaagcttatgcataaatgcttatcatgataagcccttgtgctataagctgcaa 30972617  T
Q  852 ataagctgtttatccaa 868  Q
    |||||||||||||||||    
T  30972618 ataagctgtttatccaa 30972634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 606 - 681
Target Start/End: Complemental strand, 32582888 - 32582816
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 681  Q
    |||||||||||||| ||||||||||||||| |  || |||||||   |||||  ||||||||||||||||||||||    
T  32582888 tgtttggattgacttatttgagtttatctactaccataagtttt---agactgtttgggagaactcatgaaaacag 32582816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Original strand, 24684903 - 24684951
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||| || ||| |||||||||||||||||||||||||| |||||    
T  24684903 aaaacaattaaaatttattttatctttttctataaaaatagcttatgta 24684951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 30958209 - 30958145
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 394  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||  ||| ||||| |||||||    
T  30958209 aattgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagt 30958145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 330 - 394
Target Start/End: Complemental strand, 30974021 - 30973957
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 394  Q
    |||||||||| | |||||||||||||||||||||||| | ||||||  ||| ||||| |||||||    
T  30974021 aattgattttgaatgaattgattttgtaaaattgattttggctaaatgtgagttgaatgtaaagt 30973957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 601 - 680
Target Start/End: Original strand, 42799880 - 42799960
Alignment:
Q  601 gggcctgtttggattgactcatttgag-tttatctattgacacaagttttgcaagactccttgggagaactcatgaaaaca 680  Q
    |||||||||||||||| || ||||||| |||||||| ||||| | ||||||  | |||| ||||||||||| |||||||||    
T  42799880 gggcctgtttggattggcttatttgagctttatctactgacatatgttttgtgaaactctttgggagaacttatgaaaaca 42799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 816 - 868
Target Start/End: Original strand, 42800057 - 42800109
Alignment:
Q  816 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||| |||||||||| ||||| |||||| |||||||||||||||| ||||||    
T  42800057 gcttaacatgataagcgcttctgctataagctacaaataagctgttaatccaa 42800109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 42913228 - 42913164
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    |||||||||||| |||||||||||| | ||||||| |||||| |||||| |||||| || |||||    
T  42913228 aaaattgattttgagtgaattgattgtataaaattaattctaactaaaagtgaattaaatgtaaa 42913164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 360
Target Start/End: Original strand, 49356304 - 49356336
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaa 360  Q
    |||||||||||||||||||||||||||||||||    
T  49356304 aaaattgatttttagtgaattgattttgtaaaa 49356336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 813 - 868
Target Start/End: Original strand, 1508722 - 1508777
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||||||| | ||||||  | |||||||||||||| |||||    
T  1508722 agcgcttatcatgataagcacttgtgctataagttgcaaataagctgtttttccaa 1508777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 572
Target Start/End: Original strand, 3845148 - 3845276
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttata 541  Q
    |||||||||| ||||||||||||||| | ||||||| ||||| |   || ||||||| ||||| ||||||||| | | || | ||| ||||| ||| | |    
T  3845148 aaaatcaattctagaatcaaaagctccagtttctagtttcaagt--tataaattctagaggcagaatcaattctacttgagatcaaacaaacatgtcaaa 3845245  T
Q  542 ctcaattctaccgctatagaatcaattttgg 572  Q
     ||||||||||  || |||||||||||||||    
T  3845246 atcaattctacacctctagaatcaattttgg 3845276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 513
Target Start/End: Complemental strand, 5406957 - 5406886
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||| || ||||| |||||   |||||||||||| | ||||||| |||||| ||||||||||||||    
T  5406957 aaaatcaattctataatcagaagctaccatttctagcttcgagtagaatccattctagaggcaaaatcaatt 5406886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 599 - 650
Target Start/End: Original strand, 16072953 - 16073004
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    |||| |||||||||||||||| ||||||| ||||||| ||||| ||||||||    
T  16072953 taggacctgtttggattgacttatttgagcttatctaatgacataagttttg 16073004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 404
Target Start/End: Complemental strand, 25620254 - 25620179
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtt 404  Q
    ||||| ||||| ||| |||||||||||||||||||||| ||  |||| || || |||| ||||||||| |||||||    
T  25620254 aaattaattttgagtaaattgattttgtaaaattgattataattaaatattaaatgaaagtaaagtgatttatgtt 25620179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 816 - 867
Target Start/End: Original strand, 31365416 - 31365467
Alignment:
Q  816 gcttatcatgataagcacttctactataaactacaaataagctgtttatcca 867  Q
    |||||||||||||| ||||| | |||||| || |||||||||||||||||||    
T  31365416 gcttatcatgataatcacttgtgctataagctgcaaataagctgtttatcca 31365467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 756 - 830
Target Start/End: Original strand, 34632131 - 34632206
Alignment:
Q  756 tatgcgaaaacaatttaactttg-ttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    |||| ||||||||||| |||||  ||||||||||||||||| |||| ||| || ||| |||| |||||||||||||    
T  34632131 tatgtgaaaacaatttgactttaattttatctttttctatagaaattgcttatatataagcgattatcatgataag 34632206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 601 - 696
Target Start/End: Original strand, 42545312 - 42545407
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    ||||||| || ||||| || ||||||  | ||||| |||||  |||||||  |||||  ||||||||||||||||||||||||||||  |||||||    
T  42545312 gggcctgcttagattggcttatttgaactcatctagtgacattagttttgttagactatttgggagaactcatgaaaacagcttatgataattttc 42545407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 497
Target Start/End: Complemental strand, 52364102 - 52364047
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct 497  Q
    ||||||||||||||||||||||||| ||| |  ||||||||| ||||| |||||||    
T  52364102 aaaatcaattatagaatcaaaagctataaatcatagcttcaagtagaaacaattct 52364047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 423 - 473
Target Start/End: Complemental strand, 23187915 - 23187865
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaattt 473  Q
    |||||||||||||||||| ||| |||||| |||||| |||||||| |||||    
T  23187915 aacaacaaatttgagtgtaaaattcaattctagaattaaaagctccaattt 23187865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 347 - 405
Target Start/End: Complemental strand, 24916639 - 24916581
Alignment:
Q  347 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 405  Q
    |||||||||||||||||||||  ||||||| ||| ||||| ||||| ||| ||||||||    
T  24916639 ttgattttgtaaaattgattcaggctaaaagtgagttgaatgtaaaatgatttatgttt 24916581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 329 - 423
Target Start/End: Original strand, 25129451 - 25129545
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||| || | ||||||||| |||||||||||||||  | ||||| ||| ||||| |||| |||| ||||||||| ||  |||||| |||||    
T  25129451 aaattgatcttgaatgaattgatgttgtaaaattgattcaggataaaagtgagttgaatgtaacgtgatttatgtttggatgtatttatgtaaaa 25129545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 430 - 500
Target Start/End: Original strand, 27499383 - 27499453
Alignment:
Q  430 aatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaa 500  Q
    ||||| ||| |||||||||||| |||||| |||||||  |||||||| ||||||| ||| |||||| ||||    
T  27499383 aatttaagtattaaaatcaattttagaattaaaagcttcaatttctaacttcaacaagagtcaattttaaa 27499453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 333 - 423
Target Start/End: Original strand, 41591269 - 41591359
Alignment:
Q  333 tgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||| | ||||||||||   |||||| | |||| ||||||||||| |||||  |||||||| ||||||||| ||||||| || |||||    
T  41591269 tgattttaaatgaattgattcaataaaataggttcttgctaaaaatgagttgaatttaaagtgatttatgtttggatacattcatgtaaaa 41591359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 345 - 415
Target Start/End: Original strand, 48089618 - 48089688
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattt 415  Q
    |||||||| | ||||||||||||||| ||||| ||| ||||| ||||| ||| ||||| ||| ||||||||    
T  48089618 aattgattctttaaaattgattctagttaaaagtgagttgaatgtaaaatgatttatgattggatacattt 48089688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 675 - 744
Target Start/End: Original strand, 13715560 - 13715629
Alignment:
Q  675 aaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttata 744  Q
    ||||||||||||| ||| ||||   ||||||||||| |||||||||||||||  |||||| | |||||||    
T  13715560 aaaacagcttatgacaactttcataagcatttttcaacttattttcataagttgtccaatatcgcttata 13715629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 608 - 649
Target Start/End: Complemental strand, 26911740 - 26911699
Alignment:
Q  608 tttggattgactcatttgagtttatctattgacacaagtttt 649  Q
    |||||||||||| ||||||||||||||| ||||| |||||||    
T  26911740 tttggattgacttatttgagtttatctactgacataagtttt 26911699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 609 - 650
Target Start/End: Original strand, 33405114 - 33405155
Alignment:
Q  609 ttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    ||||||||||| ||||||||||||||| ||||| ||||||||    
T  33405114 ttggattgacttatttgagtttatctactgacataagttttg 33405155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 606 - 687
Target Start/End: Original strand, 34610725 - 34610806
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    |||||| || |||| ||||||| ||||||| ||||| |||||||| |  |||  ||||||||||| |||||||| |||||||    
T  34610725 tgtttgtatggacttatttgagcttatctactgacataagttttgtacaactatttgggagaacttatgaaaactgcttatg 34610806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 661 - 726
Target Start/End: Complemental strand, 37689325 - 37689261
Alignment:
Q  661 tgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagt 726  Q
    |||||||||| | |||||||||||||| ||||||||   ||| ||||||| |||||||||||||||    
T  37689325 tgggagaacttaagaaaacagcttatgacaattttc-aaagcttttttcaacttattttcataagt 37689261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 397
Target Start/End: Original strand, 44958553 - 44958622
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaa 397  Q
    ||||| || ||| |||||||||||  ||||||||||||| | ||||||| ||| ||||| ||||||||||    
T  44958553 aaaatcgactttgagtgaattgatcatgtaaaattgattttggctaaaagtgagttgaaagtaaagtgaa 44958622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 761 - 829
Target Start/End: Complemental strand, 46030980 - 46030911
Alignment:
Q  761 gaaaacaattt-aactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataa 829  Q
    ||||||||||| |||||| ||||||||||||||||  |||||||| || ||| || | ||||||||||||    
T  46030980 gaaaacaattttaactttattttatctttttctatcgaaatagcttatatataagtgtttatcatgataa 46030911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 366
Target Start/End: Complemental strand, 49158693 - 49158656
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgatt 366  Q
    ||||||||||| | ||||||||||||||||||||||||    
T  49158693 aaattgattttgaatgaattgattttgtaaaattgatt 49158656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 513
Target Start/End: Complemental strand, 51167919 - 51167846
Alignment:
Q  441 taaaatcaattatagaa-tcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||||||| ||||| |||||||||  || || |||||| |||||||||||||| ||||  |||||||||||    
T  51167919 taaaatcaattgtagaagtcaaaagctgcaaattgtagcttaaactagaatcaattataaaaacaaaatcaatt 51167846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 417
Target Start/End: Complemental strand, 53568050 - 53567961
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 417  Q
    |||||||||||| ||||||||||||||  |||||||||| |   ||||| ||| ||||| | ||||| | ||||||||| |||| |||||    
T  53568050 aaaattgattttgagtgaattgattttacaaaattgattttgattaaaagtgagttgaatgaaaagtaatttatgtttggatacctttat 53567961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 2e-27; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 603 - 754
Target Start/End: Complemental strand, 54426197 - 54426046
Alignment:
Q  603 gcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc 702  Q
    |||||||||||||| || ||||||| ||||||| || || ||||||||  ||||| |||||||||||| | |||||||||||||| ||||||||   |||    
T  54426197 gcctgtttggattggcttatttgagcttatctactggcataagttttgtgagactgcttgggagaacttaggaaaacagcttatgacaattttcataagc 54426098  T
Q  703 atttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
     |||||||  |||||||||||||| ||||||| ||| ||||||| |||||||    
T  54426097 ttttttcaagttattttcataagttctccaatatagattataaaaacaactt 54426046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 602 - 754
Target Start/End: Original strand, 17822780 - 17822932
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    |||||||||||||| ||| ||||||| ||||||| ||||| ||||| ||  |||||  || |||||||  |||||||||||||||| || |||||   ||    
T  17822780 ggcctgtttggattaacttatttgagcttatctactgacataagttctgtgagactatttaggagaacatatgaaaacagcttatgacatttttcataag 17822879  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    | ||||| ||||||||||||||||| ||||||  |||||||| || |||||||    
T  17822880 ctttttttagcttattttcataagttctccaagatagcttatgaaaacaactt 17822932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 664 - 868
Target Start/End: Original strand, 50662715 - 50662918
Alignment:
Q  664 gagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaa 763  Q
    ||||||| |||||||||| | ||| ||||||||   ||| ||||||| |||||||||| || | ||||||| ||||||||| | ||||||| || ||  |    
T  50662715 gagaacttatgaaaacagttaatgacaattttcataagcttttttcaacttattttcacaatttctccaatatagcttatataaacaacttata-gcata 50662813  T
Q  764 aacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttta 863  Q
     |||||||||| || ||||||||| | |||||||||||||| ||  || | |||| |||||||||||| ||| |  ||||| || |||||||| ||||||    
T  50662814 tacaatttaacattattttatcttatgctataaaaatagcttatacataaacgctcatcatgataagctcttgtgatataagctgcaaataagttgttta 50662913  T
Q  864 tccaa 868  Q
    |||||    
T  50662914 tccaa 50662918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 601 - 754
Target Start/End: Original strand, 21731570 - 21731723
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    ||||||||||||||||  | |||||||  |||||| ||||| ||||||||  ||| |  ||||||||||| |||||||||||||||  ||||||||   |    
T  21731570 gggcctgtttggattggtttatttgagcatatctactgacataagttttgtgagattgtttgggagaacttatgaaaacagcttatcacaattttcataa 21731669  T
Q  701 gcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
     | ||||||| |||| |||||||| | ||||||| ||||||||||| |||||||    
T  21731670 acttttttcaacttactttcataaattctccaatatagcttataaaaacaactt 21731723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 33844047 - 33843987
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  33844047 aacaataaatttgagtgttaaaatcaattttagaatcaaaagctccaatttctagcttcaa 33843987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 429 - 532
Target Start/End: Original strand, 32818391 - 32818494
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    ||||||| |||  |||||||||| ||||||||||||||  || |||||||||||| |||||||||||||  ||||||||||||||| | | ||||| |||    
T  32818391 aaatttgtgtgcaaaaatcaattctagaatcaaaagctacaaattctagcttcaaatagaatcaattctggaggcaaaatcaattctactcgaaagaaac 32818490  T
Q  529 caaa 532  Q
    ||||    
T  32818491 caaa 32818494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 343 - 513
Target Start/End: Original strand, 55927696 - 55927875
Alignment:
Q  343 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatt 433  Q
    ||||||||||| ||||||||||||| || ||||| ||| ||| || ||| |||| ||||||||| ||||||| || |||||         |||| |||||    
T  55927696 tgaattgatttcgtaaaattgattccagttaaaattgagttggagttaatgtgatttatgtttggatacattcatgtaaaagtgacttgaacaataaatt 55927795  T
Q  434 tgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |  ||||||| |||||||| |||||  ||||| |||| |||| | ||||||||||| |||||||||||||||    
T  55927796 tgagtgtgacgatcaattctagaatcagaagctacaatttttagcctcaagtggaatcaattctgaaggcaaaatcaatt 55927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 746
Target Start/End: Original strand, 26780 - 26923
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    ||||||||||||||| || ||||||| ||||| | || || ||| ||||  |||||  ||  ||||| | |||||||||||||||| ||| |||| | ||    
T  26780 ggcctgtttggattggcttatttgagcttatcaactggcataagctttgttagactgtttccgagaaattatgaaaacagcttatgacaaatttcacaag 26879  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    | |||||||| |||||||||||||| ||||||| |||||||||||    
T  26880 c-tttttcagattattttcataagttctccaatatagcttataaa 26923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 601 - 733
Target Start/End: Original strand, 25904137 - 25904269
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    |||||||||| | |||||| ||||||| ||||| | ||||| || |||||  |||||  |||||||| || |||||||||||||||| || |||||   |    
T  25904137 gggcctgttttggttgacttatttgagcttatccaatgacataaattttgtgagactgtttgggagagcttatgaaaacagcttatgccatttttcataa 25904236  T
Q  701 gcatttttcagcttattttcataagtactccaa 733  Q
    || |||||||||||||||| |||||| ||||||    
T  25904237 gcttttttcagcttatttttataagttctccaa 25904269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 614 - 746
Target Start/End: Complemental strand, 29657527 - 29657395
Alignment:
Q  614 ttgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagct 713  Q
    |||||| ||||||| |||||||   ||||||||||||  ||| | |||| ||||||| |||||||||||||||| ||||||||   ||||||||| ||||    
T  29657527 ttgacttatttgagcttatctaccaacacaagttttgtgagattgcttgagagaacttatgaaaacagcttatgacaattttcaaaagcatttttgagct 29657428  T
Q  714 tattttcataagtactccaatctagcttataaa 746  Q
    || |||||||| | ||| ||| |||||| ||||    
T  29657427 taatttcataacttctctaatatagcttgtaaa 29657395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 754
Target Start/End: Original strand, 53294029 - 53294181
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    |||||||||||||||||| ||||| | ||||||| |||||  ||||||| ||||||  |||||| ||||||||||||||  |||||    |||||   ||    
T  53294029 ggcctgtttggattgactaatttgtgcttatctactgacatgagttttgtaagactgtttgggaaaactcatgaaaacaaattatgatggttttcaaaag 53294128  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    |  |||||||||| ||||||||||| ||| ||| ||| ||||||| |||||||    
T  53294129 ctattttcagcttgttttcataagttctctaatatagtttataaaaacaactt 53294181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 572
Target Start/End: Complemental strand, 2635227 - 2635084
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    |||||||||| |||||||||||| |||| |||||||||| ||| |||||||||||  | ||||||||||  ||||||||||| ||| | |  |||||||     
T  2635227 aaatttgagtcttaaaatcaattctagactcaaaagctccaatctctagcttcaagcataatcaattctggaggcaaaatcagttctacttaaaagcaat 2635128  T
Q  529 caaacttgttatactcaattctaccgctatagaatcaattttgg 572  Q
    ||||| ||| | | |||||| |||   | |||||||||||||||    
T  2635127 caaacatgtcaaaatcaattttacacttctagaatcaattttgg 2635084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 43868310 - 43868215
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||||| | |||||||||||||||||||| ||||||| ||||| | | ||||| ||||||||| || | |||| |||||||||| |||||    
T  43868310 aaaattgattttgaatgaattgattttgtaaaattaattctagttaaaagtaagttgaaagtaaagtgatttgtctttggatacatttatgtaaaa 43868215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 762 - 868
Target Start/End: Complemental strand, 3155593 - 3155487
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||||||||||||| ||||||||||| ||||| |||||||| ||  ||    |||||||||||||||| ||| |||||||| || || ||||| ||||    
T  3155593 aaaacaatttaactttattttatcttttgctatagaaatagcttatacatacatgcttatcatgataagcgcttgtactataagctgcagataagttgtt 3155494  T
Q  862 tatccaa 868  Q
    |||||||    
T  3155493 tatccaa 3155487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 330 - 514
Target Start/End: Complemental strand, 22250398 - 22250205
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa------ 423  Q
    |||||||||| || ||||||||| ||||||||||||| |  ||||||  || ||||| || |||||| |||  |||| ||||||| || |||||          
T  22250398 aattgattttgagggaattgattctgtaaaattgattatgactaaaagcgagttgaatgtgaagtgatttacatttggatacattcatgtaaaagtgaat 22250299  T
Q  424 ---acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
       |||| |||||||||| |||||| |||||  |||||||||||||  ||||||| ||||||| ||||| |||| ||| | |||||||||||||    
T  22250298 cgaacaataaatttgagtattaaaagcaatttcagaatcaaaagcttcaatttcttgcttcaagtagaaccaatcctagatgcaaaatcaattc 22250205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 605 - 681
Target Start/End: Complemental strand, 8705093 - 8705017
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 681  Q
    |||||||||||| |||||||||| ||||||||||||| ||||||||  |||||  ||||||||||| || |||||||    
T  8705093 ctgtttggattggctcatttgagcttatctattgacataagttttgtgagactgattgggagaacttataaaaacag 8705017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 423 - 483
Target Start/End: Complemental strand, 37439215 - 37439155
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    ||||| ||| |||||||| ||||||||||||||||| ||||||| ||||||||||||||||    
T  37439215 aacaataaaattgagtgtaaaaatcaattatagaattaaaagctataatttctagcttcaa 37439155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 606 - 754
Target Start/End: Original strand, 39603090 - 39603237
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    ||||||||||| || ||||||| || |||||||  | ||||||||  |||||  ||||||||||| | |||||||||||||| |||||||    ||| ||    
T  39603090 tgtttggattggcttatttgagctt-tctattggtataagttttgtgagactgtttgggagaacttaggaaaacagcttatgacaatttttataagcttt 39603188  T
Q  706 tttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||| |  |||||||||||||| ||||||| || |||||||| |||||||    
T  39603189 ttttaagttattttcataagttctccaatataccttataaaaacaactt 39603237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 429 - 552
Target Start/End: Complemental strand, 35065127 - 35065004
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    ||||||| |||| |||||||||| ||||||||||||    || | |||||||||| || |||||||| |  ||||||||||||||| | | |||||||||    
T  35065127 aaatttgtgtgtaaaaatcaattctagaatcaaaagtcacaaatactagcttcaagtaaaatcaattattgaggcaaaatcaattctactcgaaagcaac 35065028  T
Q  529 caaacttgttatactcaattctac 552  Q
    ||||  ||| ||| ||||||||||    
T  35065027 caaaaatgtcataatcaattctac 35065004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 773 - 868
Target Start/End: Original strand, 26982 - 27079
Alignment:
Q  773 actttgttttatctttttctataaaaatagctaatgtat--gagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||| ||||||||||||| |||||||| ||| ||||||  | |||||||||||||||||| ||| | |||||| || |||| ||| |||||||||||    
T  26982 actttattttatctttttccataaaaatggcttatgtatatgcgcgcttatcatgataagcgcttgtgctataagctgcaaacaagatgtttatccaa 27079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 514
Target Start/End: Original strand, 2206364 - 2206450
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||  |||||||||  ||||||||||||||| ||||| ||||||||| |||||||||||| |  ||| |||||||||||    
T  2206364 aaatttgagtgcaaaaatcaatcctagaatcaaaagctccaatttttagcttcaagctagaatcaattttggaggaaaaatcaattc 2206450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 608 - 726
Target Start/End: Complemental strand, 22030352 - 22030234
Alignment:
Q  608 tttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttt 707  Q
    |||| ||||||| ||||||| || ||||||  || ||||||||  || ||  ||||||||||| |||||||||||||||| ||||||||   ||| |||     
T  22030352 tttgtattgacttatttgagcttgtctattagcataagttttgtgagcctatttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttc 22030253  T
Q  708 tcagcttattttcataagt 726  Q
    |||| ||||||||||||||    
T  22030252 tcaggttattttcataagt 22030234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 412
Target Start/End: Original strand, 38740287 - 38740369
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 412  Q
    |||||||||| | |||||||||||||||||||||||| | | ||||| ||| |||||| | |||||| ||||||||| |||||    
T  38740287 aattgattttgaatgaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 38740369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 762 - 868
Target Start/End: Original strand, 44863042 - 44863148
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    ||||||||||||  || | ||| |||||||||||||||||||| ||| || ||| |||||||||| |||  ||| | |||||| || |||||||| ||||    
T  44863042 aaaacaatttaatgttatcttacctttttctataaaaatagcttatgcataagcacttatcatgacaagtgcttgtgctataagctgcaaataagttgtt 44863141  T
Q  862 tatccaa 868  Q
    |||||||    
T  44863142 tatccaa 44863148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 643 - 804
Target Start/End: Original strand, 50681045 - 50681211
Alignment:
Q  643 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 742  Q
    ||||||||  |||||  ||| ||||||| |||||||||| | ||| ||||||||   ||| |||||||  |||||||||||| | ||||||| |||||||    
T  50681045 aagttttgtgagactgtttgagagaacttatgaaaacagttaatgacaattttcataagcttttttcaatttattttcataatttctccaatatagctta 50681144  T
Q  743 taaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    || | |||||||      ||| | ||||||||||||| || ||||||||| | ||||||||||||||    
T  50681145 tataaacaacttatagcatatacaaaaacaatttaacattattttatcttatcctataaaaatagct 50681211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 442 - 483
Target Start/End: Complemental strand, 8330167 - 8330126
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  8330167 aaaatcaattatagaatcaaaagctccaatttctagcttcaa 8330126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 429 - 513
Target Start/End: Complemental strand, 30357576 - 30357492
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |||| ||||||||||||| |||||||||||  || |   |||||||| |||||||||||||||||  ||||||||||    
T  30357576 aaatttgtgtgtaaaaatcaattatataatcaaaagctacaaatcacagcttcaagtagaatcaattctaaagataaaatcaatt 30357492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 605 - 744
Target Start/End: Complemental strand, 2244203 - 2244064
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 704  Q
    ||||||||||||| | ||  ||||||||||| ||||| |||||||   | |||  ||||||||| |  | ||||||||||||| |||| |||   | | |    
T  2244203 ctgtttggattgatttatccgagtttatctactgacataagttttttgaaactgtttgggagaatttttaaaaacagcttatgacaatattcataaactt 2244104  T
Q  705 ttttcagcttattttcataagtactccaatctagcttata 744  Q
    |||||| ||||||||||||||| ||||||| |||||||||    
T  2244103 ttttcaccttattttcataagttctccaatatagcttata 2244064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 423 - 474
Target Start/End: Complemental strand, 4243457 - 4243406
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttc 474  Q
    ||||| |||||||||||| |||||||||| ||||||||||||||| ||||||    
T  4243457 aacaataaatttgagtgtaaaaatcaattctagaatcaaaagctccaatttc 4243406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 672 - 751
Target Start/End: Original strand, 7839346 - 7839425
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
    ||||||||| |||||| ||||||||   ||| ||||||| ||||||||| ||||| || |||||||||||||||| ||||    
T  7839346 atgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaa 7839425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 18597110 - 18597019
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||| || ||||| ||||||||||||||||||||||||||| |  || || |||||||||  |||||||||||||  ||| ||||||||||    
T  18597110 aacaataactttgaatgttaaaatcaattatagaatcaaaaggttcaaattatagcttcaagttagaatcaattctggaggtaaaatcaatt 18597019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 420 - 510
Target Start/End: Complemental strand, 33843756 - 33843661
Alignment:
Q  420 aaaaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttc-----tagcttcaactagaatcaattctaaaggcaaaatca 510  Q
    |||||||| ||||||||||||||||||||||| ||| || |||||||| ||||||      |||||||| ||||||||||| |  |||||||||||    
T  33843756 aaaaacaataaatttgagtgttaaaatcaattttaggataaaaagctccaatttcagaatcagcttcaagtagaatcaattttggaggcaaaatca 33843661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 604 - 754
Target Start/End: Original strand, 40830947 - 40831096
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatga-aaacagcttatgtcaattttctcgagc 702  Q
    ||||||||||||| || ||||||| |||||||||| || ||||||||  |||||  | || |||| | |||| |||||||||| | ||| |||    |||    
T  40830947 cctgtttggattggctaatttgagcttatctattg-cataagttttgtgagactgttcggaagaaattatgagaaacagcttacgacaacttttataagc 40831045  T
Q  703 atttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
     ||||||| ||||||| ||||||| ||||||||||||||||||| |||||||    
T  40831046 ttttttcaacttattt-cataagttctccaatctagcttataaaaacaactt 40831096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 762 - 868
Target Start/End: Complemental strand, 11389516 - 11389410
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||| |||||||||  ||||||||||| |||| |||||  | ||  || ||| ||||||||||||||||||  |  |||||||| |||||||| ||||    
T  11389516 aaaacagtttaactttactttatctttttttatagaaataatttatacataagcacttatcatgataagcactcatgatataaactgcaaataagttgtt 11389417  T
Q  862 tatccaa 868  Q
    |||||||    
T  11389416 tatccaa 11389410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 20911810 - 20911896
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||||||| |||||||||||| ||||||||||||| | || |||  ||| ||||||| ||| | | ||||||||| |||||||    
T  20911810 aaaattgattttgagtgaattgattatgtaaaattgattatggcaaaagttgagttgaaggcaaaataatttatgtttgaatacatt 20911896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 494
Target Start/End: Complemental strand, 1048781 - 1048716
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaat 494  Q
    |||||||||||| | ||||||||||||||| ||||||| ||| ||||| ||| || ||||||||||    
T  1048781 aaatttgagtgtaagaatcaattatagaattaaaagctataaattctaactttaagtagaatcaat 1048716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 713 - 801
Target Start/End: Complemental strand, 9760484 - 9760391
Alignment:
Q  713 ttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaata 801  Q
    |||||||||||||| ||||||| ||||||||||| |||||||      |||   |||| ||||||||||| ||||||||||||| |||||||||    
T  9760484 ttattttcataagttctccaatatagcttataaaaacaacttatagcatattaaaaaagaatttaactttattttatctttttcaataaaaata 9760391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 10185265 - 10185204
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    |||||| |||||||||||| || ||||||| ||||||||||||||  |||||||| ||||||    
T  10185265 aaacaataaatttgagtgtaaagatcaattttagaatcaaaagcttcaatttctaccttcaa 10185204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 605 - 726
Target Start/End: Original strand, 13126494 - 13126615
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 704  Q
    |||||||||||| || |||| || ||| ||| | ||| ||||||||  |||||  |||| |||||| || ||||||||||||| || || ||   ||| |    
T  13126494 ctgtttggattggcttattttagcttacctactaacataagttttgtgagactgtttggaagaacttataaaaacagcttatgacatttatcataagctt 13126593  T
Q  705 ttttcagcttattttcataagt 726  Q
    ||||||||||||||||||||||    
T  13126594 ttttcagcttattttcataagt 13126615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 607 - 696
Target Start/End: Original strand, 15173223 - 15173312
Alignment:
Q  607 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    ||||||||||||| ||||||  ||||||| ||||| ||||||||  |||||  ||||||||  | ||||||| |||||||| ||||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagttttgtgagactgtttgggagactttatgaaaatagcttatgacaattttc 15173312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 700 - 868
Target Start/End: Complemental strand, 44138616 - 44138443
Alignment:
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaacacaacttg-----tatgcgaaaacaatttaactttgttttatctttttctat 794  Q
    |||| |||||||||||||||||||||| ||||||  | | |||| || |||| ||      ||| ||||| |||||||||||| ||||||||| | ||||    
T  44138616 agcaattttcagcttattttcataagttctccaacatggtttatgaaaacaaattacaggctatacgaaagcaatttaactttattttatcttctgctat 44138517  T
Q  795 aaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    | ||| |||| ||  || |||   ||||||||||||  ||| ||||| || || ||||||||||||||||||||    
T  44138516 agaaacagcttatacataagcaagtatcatgataagtgcttgtactaaaagctgcaaataagctgtttatccaa 44138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 392
Target Start/End: Original strand, 24364103 - 24364167
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    |||||||||||| | |||||||||| |||||||||||||||  |||||| ||| ||||| |||||    
T  24364103 aaaattgattttgaatgaattgattatgtaaaattgattctcactaaaagtgatttgaatgtaaa 24364167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 599 - 647
Target Start/End: Complemental strand, 25571417 - 25571369
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagtt 647  Q
    |||||||||||||||||| || ||||||||||||||| ||||| |||||    
T  25571417 tagggcctgtttggattggcttatttgagtttatctactgacataagtt 25571369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 600 - 696
Target Start/End: Original strand, 42403936 - 42404031
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    |||||||||||||||||||| ||||||| ||||| | ||||| ||||||||   | ||  ||||||||| |  ||||||||||||||| ||||||||    
T  42403936 agggcctgtttggattgacttatttgagcttatcaactgacataagttttgtgtg-ctatttgggagaatttctgaaaacagcttatgacaattttc 42404031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 423 - 573
Target Start/End: Complemental strand, 45329918 - 45329766
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttc-aactagaatcaattctaaaggcaaaatcaattc-aagtgg 520  Q
    ||||| |||||||||||| || ||||||| |||||||||||| |  ||||| ||| ||| ||  |||||||||| |  ||||||||| ||||| || | |    
T  45329918 aacaaaaaatttgagtgtaaatatcaattttagaatcaaaagattcaatttatagattcaaagaagaatcaattatggaggcaaaataaattctaattag 45329819  T
Q  521 aaagcaaccaaacttgttatactcaattctaccgctatagaatcaattttggc 573  Q
    | ||||||||||| ||||| | |||||| |||  || || |||||||||||||    
T  45329818 agagcaaccaaacatgttaaagtcaattttacacctctataatcaattttggc 45329766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 392
Target Start/End: Complemental strand, 48575558 - 48575494
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    |||||| ||||| | |||||||||||||||||||||||| | | ||||||||| ||||| |||||    
T  48575558 aaaattaattttgaatgaattgattttgtaaaattgatttttgataaaaatgagttgaatgtaaa 48575494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 403
Target Start/End: Complemental strand, 5835853 - 5835778
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgt 403  Q
    |||||||||||| | ||||||||||||||| |||||||| |   ||||| ||||||||| | ||||||| ||||||    
T  5835853 aaaattgattttgattgaattgattttgtagaattgattttgattaaaactgaattgaatgaaaagtgatttatgt 5835778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 513
Target Start/End: Complemental strand, 16644029 - 16643958
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||| ||||||||||| || ||| || ||||||||| |||||| |||  |||| ||||||||||||    
T  16644029 aaaatcaattctagaatcaaaatctataaattatagcttcaagtagaataaatcataaacgcaaaatcaatt 16643958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 416
Target Start/End: Original strand, 17898057 - 17898127
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacattta 416  Q
    ||||||||||||| |||||||||| ||| ||| ||| ||||| ||||||||| ||||||||| ||| |||||    
T  17898057 aattgattttgtataattgattct-gctgaaagtgagttgaatgtaaagtgatttatgtttggatatattta 17898127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 433 - 480
Target Start/End: Complemental strand, 20712710 - 20712664
Alignment:
Q  433 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagctt 480  Q
    |||||||| ||||||||||||||||| |||||||| ||||||||||||    
T  20712710 ttgagtgtaaaaatcaattatagaat-aaaagctccaatttctagctt 20712664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 760 - 807
Target Start/End: Complemental strand, 25885851 - 25885804
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaat 807  Q
    |||||||||||||||||| ||||||||||| ||||| ||| |||||||    
T  25885851 cgaaaacaatttaactttattttatcttttgctatagaaagagctaat 25885804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 604 - 695
Target Start/End: Complemental strand, 29774393 - 29774302
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaatttt 695  Q
    |||||||||| ||||| |||||||||||| || ||||   |||||||  |||||  || |||||||| ||||||| ||||||||||| ||||    
T  29774393 cctgtttggaatgacttatttgagtttatttactgactagagttttgtgagactgtttaggagaacttatgaaaatagcttatgtcattttt 29774302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 513
Target Start/End: Complemental strand, 51093309 - 51093238
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||| ||||  ||||||||| || |||||||||||  ||||||||||| || ||||||||| ||||    
T  51093309 aaaatcaattgtagaggcaaaagctccaaattctagcttcagttagaatcaattatagaggcaaaataaatt 51093238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 743
Target Start/End: Complemental strand, 55302330 - 55302263
Alignment:
Q  676 aaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttat 743  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||||||||  |||||  ||||||||    
T  55302330 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 55302263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 348 - 406
Target Start/End: Original strand, 1023849 - 1023907
Alignment:
Q  348 tgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    ||||| ||||||| ||||| ||||||||| ||| ||||||||||||||| || ||||||    
T  1023849 tgattctgtaaaaatgattttagctaaaagtgagttgaaggtaaagtgatttttgtttg 1023907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 429 - 479
Target Start/End: Complemental strand, 2206900 - 2206850
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagct 479  Q
    |||||||||||||||| |||||| || |||||||||||| ||||| |||||    
T  2206900 aaatttgagtgttaaagtcaattctaaaatcaaaagctccaatttttagct 2206850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 433 - 495
Target Start/End: Complemental strand, 9064291 - 9064229
Alignment:
Q  433 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    |||||||| |||||||||| ||||||||||| ||  || |||||| ||||| |||||||||||    
T  9064291 ttgagtgtgaaaatcaattctagaatcaaaaactacaaattctagtttcaagtagaatcaatt 9064229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 601 - 635
Target Start/End: Original strand, 22662165 - 22662199
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatcta 635  Q
    ||||||||||||||||||| |||||||||||||||    
T  22662165 gggcctgtttggattgacttatttgagtttatcta 22662199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 601 - 635
Target Start/End: Original strand, 22666644 - 22666678
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatcta 635  Q
    ||||||||||||||||||| |||||||||||||||    
T  22666644 gggcctgtttggattgacttatttgagtttatcta 22666678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 600 - 650
Target Start/End: Original strand, 27043743 - 27043793
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    |||| ||||||||||||||| ||||||| ||||||| ||||| ||||||||    
T  27043743 agggtctgtttggattgacttatttgagcttatctactgacataagttttg 27043793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 472 - 514
Target Start/End: Original strand, 29779118 - 29779160
Alignment:
Q  472 ttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  29779118 ttctagcttcaagtagaatcaattctacaagcaaaatcaattc 29779160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 336 - 410
Target Start/End: Original strand, 35122301 - 35122375
Alignment:
Q  336 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 410  Q
    ||||||||||| | |||  ||||||||| |||||||||||| ||| ||||||||| ||| | |||||||| ||||    
T  35122301 tttttagtgaactaattaagtaaaattggttctagctaaaattgagttgaaggtatagttatttatgtttatata 35122375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 804
Target Start/End: Complemental strand, 43505946 - 43505904
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    ||||||||||||| || ||||||||||| ||||||||||||||    
T  43505946 aaaacaatttaacgttattttatcttttgctataaaaatagct 43505904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 766 - 804
Target Start/End: Complemental strand, 44797872 - 44797834
Alignment:
Q  766 caatttaactttgttttatctttttctataaaaatagct 804  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  44797872 caatttaacgttgttttatcttttgctataaaaatagct 44797834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 804
Target Start/End: Complemental strand, 51630101 - 51630059
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    |||||||||||||||| ||||||||||| ||||| ||||||||    
T  51630101 aaaacaatttaactttattttatcttttgctatataaatagct 51630059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 432 - 514
Target Start/End: Original strand, 55639744 - 55639826
Alignment:
Q  432 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||||| ||||| |||||| |||| ||  |||||||| | | || || |||||||| ||||| ||||||||||||    
T  55639744 tttgagtgttaaaaccaattctagaataaaaatcttcaatttctaaccttaagtaaaatcaattataaagacaaaatcaattc 55639826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 495
Target Start/End: Complemental strand, 2206580 - 2206515
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaatt 495  Q
    |||||||||| |||| ||||||||||||||||||||  ||| | |||||||||  |||||||||||    
T  2206580 atttgagtgtaaaaaacaattatagaatcaaaagctacaatgtttagcttcaagttagaatcaatt 2206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 406
Target Start/End: Complemental strand, 2206683 - 2206622
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    ||||||||||||||||||||||||  | |||| ||| |||||||| |||||| |||| ||||    
T  2206683 aattgattttgtaaaattgattctgacgaaaattgagttgaaggtgaagtgatttatttttg 2206622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 632
Target Start/End: Complemental strand, 20109172 - 20109139
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttat 632  Q
    ||||||||||||||| ||||||||||||||||||    
T  20109172 tagggcctgtttggaatgactcatttgagtttat 20109139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 600 - 725
Target Start/End: Complemental strand, 24169420 - 24169295
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||| ||||||||||| || ||| ||||||||||| || || ||||||||  |||||  ||| |||||||  | |||| |||||||| || |||||       
T  24169420 agggcttgtttggattggcttattagagtttatctactggcataagttttgtgagactatttgagagaacttttaaaaatagcttatgacatttttcata 24169321  T
Q  700 agcatttttcagcttattttcataag 725  Q
    ||  ||||||| ||||||||||||||    
T  24169320 agattttttcaacttattttcataag 24169295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 25405766 - 25405729
Alignment:
Q  326 ttaaaattgatttttagtgaattgattttgtaaaattg 363  Q
    |||||||||||||| |||||||||||| ||||||||||    
T  25405766 ttaaaattgattttgagtgaattgattatgtaaaattg 25405729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 751
Target Start/End: Complemental strand, 43506093 - 43505940
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    |||||| | |||| || |||| ||||||||||||| |  |||| ||||||||  |||||  | ||||| |||| |||||| ||||||||  | |||||      
T  43506093 tagggcatatttgaatcgacttatttgagtttatccaccgacaaaagttttgtgagactgttagggaggactcgtgaaaatagcttatgagagttttcat 43505994  T
Q  699 gagc-atttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
     |||  ||||||| |||||||||||| |  ||||||||||||||||||| ||||    
T  43505993 aagctttttttcaacttattttcatatgatctccaatctagcttataaaaacaa 43505940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 574
Target Start/End: Original strand, 48045746 - 48045867
Alignment:
Q  453 tagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttatactcaattctac 552  Q
    |||||| |||| ||| ||||||||||||||| | |||| ||||||   |||||||| | ||  | | |||||||||||||| |||   | ||||||||||    
T  48045746 tagaataaaaaactccaatttctagcttcaagtcgaataaattctggtggcaaaattagttttacttgaaagcaaccaaacatgtccgaatcaattctac 48045845  T
Q  553 cgctatagaatcaattttggcc 574  Q
      || |||||||||||||||||    
T  48045846 ttctctagaatcaattttggcc 48045867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 332 - 405
Target Start/End: Original strand, 50945390 - 50945463
Alignment:
Q  332 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 405  Q
    |||||||| |||||||||||||| ||||||||||||  | ||||  ||| || || ||||||||| ||||||||    
T  50945390 ttgattttgagtgaattgattttataaaattgattccggataaatttgagttaaatgtaaagtgatttatgttt 50945463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 733
Target Start/End: Complemental strand, 55064932 - 55064859
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 733  Q
    |||||||||||  |||||||| |||||| || |||||   ||| ||||||| ||||||||||||||| ||||||    
T  55064932 ttgggagaacttttgaaaacaacttatgacatttttcaatagcttttttcatcttattttcataagttctccaa 55064859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 4e-25; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 330 - 552
Target Start/End: Complemental strand, 32928064 - 32927833
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa------ 423  Q
    |||||||||| || ||||||||| |||||||||||||||  |||||| ||| ||||||| ||||||| || |||||| ||||||| || |||||          
T  32928064 aattgattttgagggaattgattatgtaaaattgattcttactaaaattgagttgaaggcaaagtgatttgtgtttggatacattcatgtaaaagtgagt 32927965  T
Q  424 ---acaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtgg 520  Q
       || | ||||||| |||| ||||| |||| || |||||||||||  || | |||||||||| ||||||||| | |  ||||||||||||||| | |||    
T  32927964 tgaactataaatttgtgtgtaaaaatgaattctataatcaaaagctacaaatcctagcttcaagtagaatcaactattgaggcaaaatcaattctactgg 32927865  T
Q  521 aaagcaaccaaacttgttatactcaattctac 552  Q
    ||||||||||||| ||| | | ||||||||||    
T  32927864 aaagcaaccaaacatgtcagagtcaattctac 32927833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 601 - 810
Target Start/End: Original strand, 35534527 - 35534738
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    |||||||||| || ||||| ||||||| ||||||| | ||| ||||||||  |||||  ||| |||||||  ||||||||||||||| |||||||  | |    
T  35534527 gggcctgtttagaatgacttatttgagcttatctactaacataagttttgtgagactgtttgagagaacttgtgaaaacagcttatgacaattttaacaa 35534626  T
Q  701 gcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgt---atgcgaaaacaatttaactttgttttatctttttctataaa 797  Q
    || |||||| ||||| |||||||||| ||||||| || ||||| || ||||| | |   || | |||||||||||||||| ||||||| |||||||||||    
T  35534627 gcttttttcggcttactttcataagttctccaatataacttatgaaaacaacatataacatacaaaaacaatttaactttattttatc-ttttctataaa 35534725  T
Q  798 aatagctaatgta 810  Q
    |||| || |||||    
T  35534726 aatatcttatgta 35534738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 600 - 743
Target Start/End: Original strand, 30251367 - 30251510
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||||||||||||||| || ||||||| ||||||| ||||| |||||| |  |||||  ||||||||||| | |||||||||||||  || |||||       
T  30251367 agggcctgtttggattggcttatttgagcttatctactgacataagtttcgtgagactgtttgggagaacttacgaaaacagcttattgcatttttcata 30251466  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttat 743  Q
    ||| |||| ||||||||||||||||||  |||||  ||||||||    
T  30251467 agctttttacagcttattttcataagtggtccaagatagcttat 30251510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 343 - 539
Target Start/End: Original strand, 26100072 - 26100278
Alignment:
Q  343 tgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatt 433  Q
    |||||||||| |||||||||||||||  ||||||| || ||||||||||||  | || |||||| || ||||||| |||||         || | |||||    
T  26100072 tgaattgattatgtaaaattgattctgactaaaaacgagttgaaggtaaagctatttgtgtttggatgcatttatgtaaaagtgagttgaaccataaatt 26100171  T
Q  434 tgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaag-gcaaaatcaattcaagtggaaagcaaccaaa 532  Q
    || |||| |||||||||||||||||||||||||  || | |||||||||| ||||| |||||||| ||  |||| ||||||| | | | |||||||||||    
T  26100172 tgtgtgtaaaaatcaattatagaatcaaaagctacaaatcctagcttcaaatagaaccaattctagagaccaaagtcaattctacttggaagcaaccaaa 26100271  T
Q  533 cttgtta 539  Q
    | |||||    
T  26100272 catgtta 26100278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 331 - 394
Target Start/End: Original strand, 7602042 - 7602105
Alignment:
Q  331 attgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagt 394  Q
    ||||||||| |||||||||||||| |||||||||||| | |||||||||||||||| |||||||    
T  7602042 attgattttgagtgaattgattttataaaattgattcgaactaaaaatgaattgaatgtaaagt 7602105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 643 - 746
Target Start/End: Complemental strand, 26771379 - 26771276
Alignment:
Q  643 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 742  Q
    ||||||||  |||||  ||||||||||| |||||||||||||||| ||||||||   ||| ||||||| ||||||||||||||| ||| ||| || ||||    
T  26771379 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcctttttcaacttattttcataagttctctaatatatctta 26771280  T
Q  743 taaa 746  Q
    ||||    
T  26771279 taaa 26771276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 599 - 681
Target Start/End: Original strand, 43717846 - 43717928
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacag 681  Q
    |||||||| ||||||||| || ||||||| ||||||||||||| ||||||||  |||||  ||||||||||| ||||||||||    
T  43717846 tagggcctatttggattggcttatttgagcttatctattgacataagttttgtgagactatttgggagaacttatgaaaacag 43717928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 713 - 865
Target Start/End: Original strand, 30657798 - 30657944
Alignment:
Q  713 ttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatg 812  Q
    |||||||||||||| ||||||| ||||||||||| ||| ||| ||     | ||||||||| ||| |   |||||||||||||||||||| | ||||||     
T  30657798 ttattttcataagttctccaatatagcttataaaaacatcttataac---atacaatttaaatttat---atctttttctataaaaatagtttatgtata 30657891  T
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatc 865  Q
    ||||||||||||||| |    || | |||||||||||||||||| ||||||||    
T  30657892 agcgcttatcatgattaatgtttgtgctataaactacaaataagttgtttatc 30657944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 427 - 513
Target Start/End: Complemental strand, 4554401 - 4554314
Alignment:
Q  427 acaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||||| | |||||||||| ||| ||||||||||| ||||||| |||||||  |||||||||||||  || |||||||||||    
T  4554401 acaaatttgagtataaaaatcaattttagtatcaaaagctcaaatttcttgcttcaagatagaatcaattcttgagacaaaatcaatt 4554314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 643 - 746
Target Start/End: Complemental strand, 18133770 - 18133667
Alignment:
Q  643 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 742  Q
    ||||||||  |||||  |||||||| ||  ||||| ||||||||  |||||||| | ||| ||||||||||||||||||||||| ||||||| ||| |||    
T  18133770 aagttttgtgagactgtttgggagagcttgtgaaatcagcttataacaattttcacaagcttttttcagcttattttcataagttctccaatatagttta 18133671  T
Q  743 taaa 746  Q
    ||||    
T  18133670 taaa 18133667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 330 - 424
Target Start/End: Complemental strand, 10368137 - 10368043
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    |||||||||| ||||||||| |||||||||||||||| |   ||||| ||| ||||||||||||||| || |||||  ||||||| || ||||||    
T  10368137 aattgattttgagtgaattgtttttgtaaaattgattttgagtaaaagtgagttgaaggtaaagtgatttgtgtttagatacattcatgtaaaaa 10368043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 429 - 527
Target Start/End: Original strand, 13418840 - 13418938
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaa 527  Q
    |||||||| |||||||||||||||| |||||||||||||  ||||||  ||| || ||||||||||| | ||| |||||| ||||| | | ||||||||    
T  13418840 aaatttgaatgttaaaatcaattatggaatcaaaagctccgatttcttactttaagtagaatcaattttgaagacaaaattaattctacttgaaagcaa 13418938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 599 - 804
Target Start/End: Original strand, 35643900 - 35644103
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    ||||||||||| |||||| || ||||| | ||||||| || || || |||||  |||||  |||||| |||| ||||||| || ||||| ||||||||      
T  35643900 tagggcctgttgggattggcttatttgggcttatctactggcataatttttgtgagactgtttgggataacttatgaaaatagtttatgacaattttcat 35643999  T
Q  699 gagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaa 798  Q
     ||| ||||||| ||||||||||||||  ||||||| ||| || || | |||||   ||| |||||||||||||||  |  |||||||||| | | ||||    
T  35644000 aagcttttttcaacttattttcataagctctccaatatagtttgtataaacaac--ctatacgaaaacaatttaacggtaatttatcttttgccagaaaa 35644097  T
Q  799 atagct 804  Q
    ||||||    
T  35644098 atagct 35644103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 327 - 424
Target Start/End: Complemental strand, 3206231 - 3206135
Alignment:
Q  327 taaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    ||||||||||||| ||  |||| ||||||||||||||||| ||  ||||||| | || ||| |||| |||||| |||||| |||||||||||||||||    
T  3206231 taaaattgattttaagctaatttattttgtaaaattgattttacgtaaaaat-agtttaagataaaatgaattttgtttgaatacatttatataaaaa 3206135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 342 - 423
Target Start/End: Complemental strand, 28805335 - 28805254
Alignment:
Q  342 gtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||| ||||||||||||| |||||| |  ||||||||| ||||| ||||| ||| ||||||||| ||||||| ||||||||    
T  28805335 gtgaagtgattttgtaaaactgattccaaataaaaatgatttgaaagtaaaatgatttatgtttgaatacattaatataaaa 28805254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 1820512 - 1820460
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatga 380  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  1820512 aaaattgattttgagtgaattggttttgttaaattgattctggctaaaaatga 1820460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 328 - 380
Target Start/End: Complemental strand, 1854957 - 1854905
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatga 380  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  1854957 aaaattgattttgagtgaattggttttgttaaattgattctggctaaaaatga 1854905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 599 - 687
Target Start/End: Original strand, 32840898 - 32840986
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    ||||| || |||| ||||||| | ||||| ||||||| | ||||||||||||| |||||  ||||||||||| ||||||||| ||||||    
T  32840898 tagggtctatttgaattgacttacttgagcttatctactcacacaagttttgcgagactgtttgggagaacttatgaaaacaacttatg 32840986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 9461450 - 9461544
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||||| ||| |||||||| | |||||||||||||  || ||||||||||| |  |||||||| || |||||| ||||||| ||||||||    
T  9461450 aaaattgattttgagttaattgattatttaaaattgattctgact-aaaatgaattgcaactaaagtgatttgtgtttggatacattcatataaaa 9461544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 802
Target Start/End: Original strand, 10758170 - 10758376
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||| |||||| ||||||| ||||||  ||||||  | ||| ||||||||  |||||  |||  |||| | |||||||||||||||| ||||||||       
T  10758170 agggcatgtttgaattgacttatttgaacttatctgctaacataagttttgtgagactgtttgatagaatttatgaaaacagcttatgacaattttcaaa 10758269  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctat 794  Q
    ||| ||||||||||| |||||||||||   | ||| ||||||||||| |||||||      ||| | |||||||||||||||| ||||||  ||| ||||    
T  10758270 agcttttttcagcttgttttcataagt-tgctaatatagcttataaagacaacttatagcatatacaaaaacaatttaactttattttatgatttgctat 10758368  T
Q  795 aaaaatag 802  Q
    | ||||||    
T  10758369 agaaatag 10758376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 623 - 802
Target Start/End: Original strand, 35749506 - 35749684
Alignment:
Q  623 ttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcat 722  Q
    ||||| ||||||||||||| ||||||||| || ||  ||| ||||||| ||||||||||||| |  || |||||   | | ||||||| | |||||||||    
T  35749506 ttgagcttatctattgacataagttttgcgaggctgtttgagagaacttatgaaaacagcttgtagcatttttcataaacttttttcaacatattttcat 35749605  T
Q  723 aagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatag 802  Q
    |||| ||  ||  ||||||||  | ||||||| |||   ||||||| ||||||| |||||||||||| ||||| ||||||    
T  35749606 aagttctttaagatagcttatggaaacaacttatataaaaaaacaa-ttaacttagttttatcttttgctatagaaatag 35749684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 4336571 - 4336625
Alignment:
Q  332 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaa 386  Q
    |||||||| |||||||||||||||||||||||||| | ||||||| |||| ||||    
T  4336571 ttgattttgagtgaattgattttgtaaaattgattgtggctaaaagtgaactgaa 4336625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 417
Target Start/End: Complemental strand, 4950638 - 4950568
Alignment:
Q  347 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttat 417  Q
    |||||||| ||||||||||| | |||| || ||| ||||||||||||||| ||||||||| ||| ||||||    
T  4950638 ttgattttttaaaattgattattgctataattgagttgaaggtaaagtgatttatgtttggatatatttat 4950568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 13384675 - 13384741
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    ||||||| |||| |||||||||| ||||||||||||||  || || ||||||||| |||||||||||    
T  13384675 aaatttgtgtgtgaaaatcaattctagaatcaaaagctacaaattttagcttcaaatagaatcaatt 13384741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 18355760 - 18355798
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgatt 366  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  18355760 aaaattgattttgagtgaattgattttgtaaaattgatt 18355798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 601 - 686
Target Start/End: Complemental strand, 38602483 - 38602400
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttat 686  Q
    ||||||||||||||||||| ||||||| ||||||| ||||| ||||||||  || ||  ||||||||||| ||  |||||||||||    
T  38602483 gggcctgtttggattgacttatttgagcttatctactgacataagttttgtgaggctgtttgggagaacttat--aaacagcttat 38602400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 18123398 - 18123305
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||  |||||||||||  |||||||| || |||| |||||| ||||||||||||||| ||| || |||| | ||| |||||| |||||    
T  18123398 aattgatttagagtgaattgatgatgtaaaatcgactctaactaaaagtgaattgaaggtaaaatgatttgtgttggaatatatttatgtaaaa 18123305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 660 - 753
Target Start/End: Complemental strand, 37945693 - 37945600
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaact 753  Q
    |||||||||||  ||||||||||||||| |||||| |   ||||||||| | |||||||||| ||||  | |||| ||||||||||| ||||||    
T  37945693 ttgggagaacttctgaaaacagcttatgacaatttccataagcattttttaacttattttcagaagttgtacaatatagcttataaaaacaact 37945600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 344 - 412
Target Start/End: Complemental strand, 1373149 - 1373081
Alignment:
Q  344 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 412  Q
    ||||||||||||||||||||||| | | ||||| ||| |||||| | |||||| ||||||||| |||||    
T  1373149 gaattgattttgtaaaattgattttggataaaagtgagttgaagttgaagtgatttatgtttggataca 1373081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 433 - 469
Target Start/End: Original strand, 3478728 - 3478764
Alignment:
Q  433 ttgagtgttaaaatcaattatagaatcaaaagctcta 469  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3478728 ttgagtgttaaaatcaattttagaatcaaaagctcta 3478764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 442 - 498
Target Start/End: Original strand, 15677850 - 15677906
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 498  Q
    |||||||||| || ||||||||||| ||| | |||||||||| ||||||||||||||    
T  15677850 aaaatcaattctataatcaaaagctataaatcctagcttcaagtagaatcaattcta 15677906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 346 - 386
Target Start/End: Complemental strand, 30706323 - 30706283
Alignment:
Q  346 attgattttgtaaaattgattctagctaaaaatgaattgaa 386  Q
    |||||||||||||||||||||||| || |||||||||||||    
T  30706323 attgattttgtaaaattgattctaactgaaaatgaattgaa 30706283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 424
Target Start/End: Complemental strand, 38516416 - 38516328
Alignment:
Q  336 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    |||| ||||||||||||||||| |||||||| | | ||| | ||| ||||| ||||||||| ||||||||| ||  |||||| ||||||    
T  38516416 ttttgagtgaattgattttgtagaattgattttcgataatagtgagttgaatgtaaagtgatttatgtttggatgtatttatgtaaaaa 38516328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 513
Target Start/End: Complemental strand, 38868562 - 38868478
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |||| |||||||||||||||| ||||||||  || |  ||||||||| ||||||||||| || |||||  |||||||    
T  38868562 aaatttgtgtgtgaaaatcaattatagaaccaaaagctacaaatcttagcttcaagtagaatcaattttagaggcatcatcaatt 38868478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 514
Target Start/End: Original strand, 16972079 - 16972170
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||| ||||||| || | |||||||||| || ||| |||| ||  || |||||||||||| || |||||| ||| ||||||||||||||||    
T  16972079 aacaataaatttgtgtttaaaaatcaattctaaaattaaaaactacaaattctagcttcaaatacaatcaactctgaaggcaaaatcaattc 16972170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 423 - 513
Target Start/End: Complemental strand, 38203356 - 38203265
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||||| | | ||||||| |||| |||||||| || ||||||||| || ||||||  |||||| || |||| ||||||||||||||    
T  38203356 aacaacaaatttaaatattaaaattaattctagaatcataacctctaatttttaacttcaagttagaataaactctagaggcaaaatcaatt 38203265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 602 - 753
Target Start/End: Complemental strand, 38648506 - 38648355
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    |||||||| |||||| || |||| || ||||||| ||||| ||||||||  |||||  |||||||| || |||||||||||| ||| || || ||   ||    
T  38648506 ggcctgttaggattggcttatttaagattatctactgacataagttttgtgagactgtttgggagaccttatgaaaacagctcatgacagttctcataag 38648407  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaacacaact 753  Q
    | ||||| ||| || |||||||||| || |||  |||||||| || ||||||    
T  38648406 cttttttaagcgtaatttcataagttctacaagatagcttatgaaaacaact 38648355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 598 - 745
Target Start/End: Original strand, 43045636 - 43045783
Alignment:
Q  598 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttct 697  Q
    |||| |||||||||||||| || |||| || ||||||| |  || ||| ||||  |||||  || ||||| || ||||||||||||||   |||||||      
T  43045636 ctagagcctgtttggattggcttatttaagcttatctactagcataagatttgtgagactgttttggagatcttatgaaaacagcttacaacaattttaa 43045735  T
Q  698 cgagcatttttcagcttattttcataagtactccaatctagcttataa 745  Q
      ||| ||||||| ||||||||||||||| ||||||| ||| ||||||    
T  43045736 taagcttttttcaacttattttcataagttctccaatatagtttataa 43045783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 376
Target Start/End: Original strand, 26559864 - 26559910
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaa 376  Q
    |||||||||| |||||||||||||  |||||||||||||| ||||||    
T  26559864 aattgattttgagtgaattgatttgataaaattgattctaactaaaa 26559910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 629 - 754
Target Start/End: Complemental strand, 28763496 - 28763371
Alignment:
Q  629 ttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagc-atttttcagcttattttcataagta 727  Q
    ||||||| | ||| ||||||||  |||||  ||||||||||| |||||||||||||||  ||||||||   |||  ||||||| |||| ||||||||||     
T  28763496 ttatctagtaacataagttttgtgagactgtttgggagaacttatgaaaacagcttataacaattttcataagctttttttcaactta-tttcataagtt 28763398  T
Q  728 ctccaatctagcttataaacacaactt 754  Q
    |  |||| ||||||||||| |||||||    
T  28763397 cagcaatatagcttataaaaacaactt 28763371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 330 - 392
Target Start/End: Original strand, 32994153 - 32994215
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    |||||||||| | |||| ||||| ||||||||||||||| ||| ||| ||| |||||||||||    
T  32994153 aattgattttgaatgaactgattatgtaaaattgattctggctgaaagtgagttgaaggtaaa 32994215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 35550347 - 35550309
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgatt 366  Q
    |||||||||||| | ||||||||||||||||||||||||    
T  35550347 aaaattgattttgattgaattgattttgtaaaattgatt 35550309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 760 - 830
Target Start/End: Original strand, 37444493 - 37444563
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    ||||||||||||||||||  ||||||||||  ||||  ||||||| ||  || ||||||||||||||||||    
T  37444493 cgaaaacaatttaactttactttatcttttgttatagtaatagcttatacataagcgcttatcatgataag 37444563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 440 - 514
Target Start/End: Complemental strand, 37684458 - 37684384
Alignment:
Q  440 ttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||| |||||||||||||   || | ||| |||||| |||||||||||||  || ||||||||||||    
T  37684458 ttaaaatcaattttagaatcaaaagccacaaatcctaacttcaagtagaatcaattctggagacaaaatcaattc 37684384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 406
Target Start/End: Original strand, 38715192 - 38715270
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||||| | ||||||||||||| | |||||||| ||| ||||| ||| || |  ||||||||| |||||||||    
T  38715192 aaaattgattttaattgaattgattttgcagaattgattttagttaaaattgagttaagtgtaaagtgatttatgtttg 38715270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 760 - 826
Target Start/End: Original strand, 41475138 - 41475204
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatga 826  Q
    |||||||||||||||| | ||||||||||| |||||||| ||||| ||  || || |||||||||||    
T  41475138 cgaaaacaatttaactgtattttatcttttgctataaaattagcttatacataagtgcttatcatga 41475204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 532
Target Start/End: Original strand, 4662926 - 4663027
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaacca 530  Q
    ||||| |||| |||||||||| ||||| ||||||||  || | |||||||||| |||||| |||||   | ||||||||||||| |   |||||||||||    
T  4662926 atttgtgtgtaaaaatcaattctagaaacaaaagctacaaatcctagcttcaagtagaataaattccggatgcaaaatcaattctatccgaaagcaacca 4663025  T
Q  531 aa 532  Q
    ||    
T  4663026 aa 4663027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 791 - 868
Target Start/End: Complemental strand, 5404578 - 5404501
Alignment:
Q  791 ctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||||||||| || ||  || | |||||||||||||||||| | || ||| || |||||||| |||||||||||    
T  5404578 ctataaaaatagcttatatacaagtggttatcatgataagcacttattctttaatctgcaaataagttgtttatccaa 5404501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 329 - 382
Target Start/End: Complemental strand, 5893385 - 5893332
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaat 382  Q
    ||||||||||| ||| |||||||| ||||||||||||| |  ||||||||||||    
T  5893385 aaattgattttgagttaattgattctgtaaaattgattgtgactaaaaatgaat 5893332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 431 - 516
Target Start/End: Complemental strand, 8693823 - 8693738
Alignment:
Q  431 atttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaa 516  Q
    |||||||| | ||| ||||||||||||||| ||| |  || || ||| |||||||| |||||| |||| ||||||| |||||||||    
T  8693823 atttgagtataaaagtcaattatagaatcacaagttacaacttatagtttcaactataatcaactctagaggcaaattcaattcaa 8693738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 761 - 830
Target Start/End: Original strand, 16210965 - 16211034
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataag 830  Q
    ||||||||| ||||||| ||||||| ||| ||||| |||||||| ||  ||||| || ||||||||||||    
T  16210965 gaaaacaatgtaactttattttatcatttactatagaaatagcttatacatgagtgcgtatcatgataag 16211034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 604 - 645
Target Start/End: Complemental strand, 26479938 - 26479897
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaag 645  Q
    |||||||||||||||| |||| || |||||||||||||||||    
T  26479938 cctgtttggattgacttatttaagcttatctattgacacaag 26479897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 32681238 - 32681279
Alignment:
Q  351 ttttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    ||||||||||||||||||  ||||||||||||||||| ||||    
T  32681238 ttttgtaaaattgattctcactaaaaatgaattgaagataaa 32681279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 705 - 790
Target Start/End: Original strand, 39881770 - 39881855
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatcttttt 790  Q
    |||||||||||||| ||||||  |||||   ||||||||||| |||| || | | | |||||||||| ||||| ||||||||||||    
T  39881770 ttttcagcttatttccataagctctccatgatagcttataaaaacaatttatttacaaaaacaatttgactttattttatcttttt 39881855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 4e-25; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 379 - 497
Target Start/End: Complemental strand, 41788439 - 41788312
Alignment:
Q  379 gaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaattatagaatcaaaagctcta 469  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||         ||| ||||||||||||||||||||||||||||| ||||||| |  |    
T  41788439 gaattgaaggtaaagtgatttatgtttgtatacattaatataaaagtgagttgaacagcaaatttgagtgttaaaatcaattatagactcaaaagtttca 41788340  T
Q  470 atttctagcttcaactagaatcaattct 497  Q
    ||||||||||| || |||||||||||||    
T  41788339 atttctagctttaagtagaatcaattct 41788312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 433 - 513
Target Start/End: Complemental strand, 27571922 - 27571842
Alignment:
Q  433 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||||||||||||||| ||||||||||||||| |||||||| |||||| |||||||||||||  ||| ||||||||||    
T  27571922 ttgagtgttaaaatcaattctagaatcaaaagctccaatttctaacttcaagtagaatcaattcttgaggtaaaatcaatt 27571842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 607 - 696
Target Start/End: Original strand, 34464141 - 34464230
Alignment:
Q  607 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    ||||||||||| | ||||||||||||||||||||| || |||| |||||||  ||||||| ||| |||||||||||||||| ||||||||    
T  34464141 gtttggattgatttatttgagtttatctattgacataaattttacaagactttttgggaggacttatgaaaacagcttatgacaattttc 34464230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 429 - 533
Target Start/End: Complemental strand, 45005084 - 45004980
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    ||||||||||| ||| ||||||| || |||||||  ||| ||||| ||||||||| ||||||||||||| |||||||||||||||| | | || ||||||    
T  45005084 aaatttgagtgctaagatcaattctataatcaaagcctccaatttttagcttcaagtagaatcaattctgaaggcaaaatcaattctattcgagagcaac 45004985  T
Q  529 caaac 533  Q
    |||||    
T  45004984 caaac 45004980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 330 - 552
Target Start/End: Complemental strand, 40491750 - 40491519
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataa-------- 421  Q
    |||||||||| |||||||||||| ||||||||||||| |  |||||| ||| ||||||||||||||| |||| |||| ||||||| || |||            
T  40491750 aattgattttgagtgaattgattctgtaaaattgattttgactaaaagtgagttgaaggtaaagtgatttatttttggatacattcatgtaaaagtgagt 40491651  T
Q  422 -aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtgg 520  Q
     ||||   ||||||| |||| ||| |||||| ||||||||||||||  ||    || |||||| |||| |||||||| |||||||||||||||    | |    
T  40491650 taaactttaaatttgtgtgtaaaagtcaattctagaatcaaaagctacaaaacttaacttcaagtagagtcaattctgaaggcaaaatcaattatcttcg 40491551  T
Q  521 aaagcaaccaaacttgttatactcaattctac 552  Q
    ||||||||||| | ||||| | ||||||||||    
T  40491550 aaagcaaccaaccatgttagaatcaattctac 40491519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 436 - 514
Target Start/End: Original strand, 5489874 - 5489952
Alignment:
Q  436 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||||||||||||||| |||||||||||| |||||||||| |||| ||||||||||| |  ||||||||| |||||    
T  5489874 agtgttaaaatcaattatataatcaaaagctccaatttctagcatcaagtagaatcaattttggaggcaaaattaattc 5489952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 604 - 726
Target Start/End: Original strand, 19302480 - 19302602
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagca 703  Q
    |||||||| ||||||| ||||||| ||||||| ||||| ||||||||  ||| |  ||||||||| | |||||||||||||||| ||||||||   | |     
T  19302480 cctgtttgaattgacttatttgagcttatctactgacataagttttgtgagaatatttgggagaatttatgaaaacagcttatgacaattttcataaact 19302579  T
Q  704 tttttcagcttattttcataagt 726  Q
    ||||||| |||||||||||||||    
T  19302580 tttttcaacttattttcataagt 19302602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 600 - 804
Target Start/End: Complemental strand, 48470201 - 48469992
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    |||||||||| |||||| || ||||||| |||||||| |||| |||||||   ||| |  ||||||||||| |||||||||||||||| || |||||       
T  48470201 agggcctgttaggattggcttatttgagcttatctatagacataagttttatgagattgtttgggagaacttatgaaaacagcttatggcatttttcata 48470102  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaacacaac-----ttgtatgcgaaaacaatttaactttgttttatctttttctat 794  Q
    ||| ||||| ||||||| |||||||||  | |||  |||||||| || |||||     || ||| | |||||||||||||||  ||||||||||| || |    
T  48470101 agcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatatacaaaaacaatttaacttaattttatcttttgctgt 48470002  T
Q  795 aaaaatagct 804  Q
    | ||||||||    
T  48470001 agaaatagct 48469992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 763 - 874
Target Start/End: Original strand, 20881717 - 20881828
Alignment:
Q  763 aaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgttt 862  Q
    |||||||||||||| |||||||||||| ||||| | |||||| ||  || || |||||||||||||||  ||| | |||||||||||||||||| ||||     
T  20881717 aaacaatttaacttcgttttatcttttgctatagatatagctcatacataagagcttatcatgataagtgcttgtgctataaactacaaataagttgttc 20881816  T
Q  863 atccaagcattt 874  Q
    ||| || |||||    
T  20881817 atctaaacattt 20881828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 602 - 696
Target Start/End: Original strand, 4970707 - 4970801
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc 696  Q
    |||||||||||||||||| ||||||| ||||||  ||||| |||| |||  |||||  ||||||||||| ||||||||| |||||| ||||||||    
T  4970707 ggcctgtttggattgacttatttgagcttatctcgtgacataagtcttgtgagactgtttgggagaacttatgaaaacaacttatggcaattttc 4970801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 345 - 423
Target Start/End: Original strand, 40795917 - 40795995
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||  ||||| ||| ||||||| || |||||    
T  40795917 aattgattttgtaaaattgatgttaggtaaaaatgaattgaaggtaaagtggtttatgattggatacattcatgtaaaa 40795995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 30182310 - 30182383
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    |||||| |||||||||||| ||||| |||| ||||||||||||||  ||||| ||||||||| |||||||||||    
T  30182310 aaacaataaatttgagtgtaaaaattaattctagaatcaaaagctacaatttttagcttcaagtagaatcaatt 30182383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 621 - 746
Target Start/End: Original strand, 33601344 - 33601469
Alignment:
Q  621 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 720  Q
    ||||||| |||||||||| || ||||||||  |||||| ||  ||||||| |||||||||||||||| || |||||   ||| ||||||||||||  |||    
T  33601344 atttgagcttatctattggcataagttttgtgagactcttttcgagaacttatgaaaacagcttatgacacttttcataagcttttttcagcttaaattc 33601443  T
Q  721 ataagtactccaatctagcttataaa 746  Q
    |||||| ||| ||  |||||||||||    
T  33601444 ataagttctctaagatagcttataaa 33601469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 429 - 498
Target Start/End: Original strand, 38123687 - 38123756
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 498  Q
    |||||||||||| |||||||||| |||||| | |||||  ||||||||||||||| ||||||||||||||    
T  38123687 aaatttgagtgtaaaaatcaattctagaattagaagctacaatttctagcttcaagtagaatcaattcta 38123756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 39734639 - 39734691
Alignment:
Q  344 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtga 396  Q
    ||||||||||||||||||||||||||||||||| ||| || ||||||||||||    
T  39734639 gaattgattttgtaaaattgattctagctaaaactgagtttaaggtaaagtga 39734691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 46078137 - 46078089
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    |||||||||||||||||||||||||||||||||||||||| || |||||    
T  46078137 aaaacaatttaactttgttttatctttttctataaaaataacttatgta 46078089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 660 - 742
Target Start/End: Complemental strand, 420457 - 420375
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 742  Q
    ||||||||||| |||||||||  ||||| || ||||||  ||| ||||||| ||||||||||||||| ||||||| |||||||    
T  420457 ttgggagaacttatgaaaacaatttatgacagttttctaaagcctttttcaacttattttcataagttctccaatatagctta 420375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 359 - 514
Target Start/End: Complemental strand, 15050436 - 15050271
Alignment:
Q  359 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa---------acaacaaatttgagtgttaaaatcaa 449  Q
    ||||||||||||||||||||||||| | |||||||| | ||||||||| ||| ||||  ||||||         || | | |||| | ||| ||||||||    
T  15050436 aattgattctagctaaaaatgaatttagggtaaagtaatttatgtttggatatatttccataaaagtgggttgaaccaaacatttcattgtaaaaatcaa 15050337  T
Q  450 ttatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattctaaaggcaaaatcaattc 514  Q
    || ||||||  |||||||||||||||||||||||  |  ||||||||||| | |||||||||||||    
T  15050336 ttttagaatggaaagctctaatttctagcttcaagattaaatcaattctacaagcaaaatcaattc 15050271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 606 - 743
Target Start/End: Complemental strand, 20526597 - 20526460
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    |||||||||||||| ||||||||||||||||||  | || |||||  |||||  ||| ||||||| |||||||||| ||||  || |||||   |||  |    
T  20526597 tgtttggattgacttatttgagtttatctattggtagaaattttgtgagactgtttgagagaacttatgaaaacagtttatcacatttttcgtaagctgt 20526498  T
Q  706 tttcagcttattttcataagtactccaatctagcttat 743  Q
    ||| ||||||||||||| ||| ||||||  ||||||||    
T  20526497 ttttagcttattttcattagttctccaaaatagcttat 20526460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 330 - 427
Target Start/End: Original strand, 42481803 - 42481900
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaa 427  Q
    |||||||||| |||||||||||| |||||||||||||||    |||| ||| ||||| ||||| ||| ||||||| | || ||||||| |||||||||    
T  42481803 aattgattttaagtgaattgattatgtaaaattgattctgaaaaaaagtgagttgaatgtaaaatgatttatgttcggatgcatttatctaaaaacaa 42481900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 35105330 - 35105254
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||| |||||||||||||| ||||||||||||| | | ||| || |||||| | ||||||| |||||||||    
T  35105330 aattgattttgagtgaattgattttttaaaattgattctggatgaaagtggattgaatgaaaagtgatttatgtttg 35105254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 813 - 865
Target Start/End: Original strand, 38500059 - 38500111
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatc 865  Q
    ||||||||||||||||||| ||| | ||||||||| |||||||||||||||||    
T  38500059 agcgcttatcatgataagcgcttgtgctataaactgcaaataagctgtttatc 38500111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 660 - 751
Target Start/End: Original strand, 11619131 - 11619222
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
    ||||||||| | ||||||||| |||||| ||||||||   ||| ||||||| |||| |||||||||| ||||||  ||||||||||| ||||    
T  11619131 ttgggagaatttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaa 11619222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 762 - 801
Target Start/End: Complemental strand, 20269566 - 20269527
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaata 801  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  20269566 aaaacaatttaactttgttttatcttttgctataaaaata 20269527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 660 - 751
Target Start/End: Original strand, 21568468 - 21568559
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
    ||||||||||| |||||||||||||||  ||||||||   |||  |||||| |||| || ||||||| ||||||| ||||||||||| ||||    
T  21568468 ttgggagaacttatgaaaacagcttataacaattttcataagctcttttcaacttagttccataagttctccaatatagcttataaaaacaa 21568559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 359 - 414
Target Start/End: Original strand, 29829311 - 29829366
Alignment:
Q  359 aattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||||||| ||||||||||| ||||| ||||||||| ||||||||| |||||||    
T  29829311 aattgattctggctaaaaatgagttgaatgtaaagtgatttatgtttggatacatt 29829366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 766 - 868
Target Start/End: Complemental strand, 39279749 - 39279646
Alignment:
Q  766 caatttaactttgttttatctttttctataaaaatagctaatgt-atgagcgcttatcatgataagcacttctactataaactacaaataagctgtttat 864  Q
    |||||||||||||||||||||||| ||||| ||| |||| |||| || ||| ||||| || |||||| ||| | |  |||  ||||||||||||||||||    
T  39279749 caatttaactttgttttatcttttgctatagaaacagcttatgtaataagcacttattataataagcccttgtgccttaagatacaaataagctgtttat 39279650  T
Q  865 ccaa 868  Q
    ||||    
T  39279649 ccaa 39279646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 329 - 407
Target Start/End: Original strand, 48158913 - 48158991
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaa-tgaattgaaggtaaagtgaattatgtttgt 407  Q
    ||||||||| | ||||||||||||||||| ||||||||| | ||||||| ||| ||||||||||| || |||||||||||    
T  48158913 aaattgattgtgagtgaattgattttgtataattgattcaaactaaaaagtgagttgaaggtaaaatg-attatgtttgt 48158991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 754
Target Start/End: Original strand, 19022558 - 19022652
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||| | ||||||||| |||||| ||||||||   ||   | |||| ||||||||||||||| ||||||| ||||||||||| |||||||    
T  19022558 ttgggagaatttatgaaaacaacttatgacaattttcataagttgtcttcaacttattttcataagttctccaatatagcttataaaaacaactt 19022652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 818 - 868
Target Start/End: Original strand, 27863843 - 27863893
Alignment:
Q  818 ttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||||||||||||| | |||||| ||||||||||| |||||||||||    
T  27863843 ttatcatgataagcacttgtgctataagctacaaataagttgtttatccaa 27863893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 762 - 804
Target Start/End: Original strand, 28613614 - 28613656
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    ||||||||||||||||||||||||||||  |||||||||||||    
T  28613614 aaaacaatttaactttgttttatcttttgttataaaaatagct 28613656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 614 - 754
Target Start/End: Original strand, 45790357 - 45790492
Alignment:
Q  614 ttgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagct 713  Q
    |||||| |||||| |||||||||||||| |||||||  | || |  || |||||||| ||||||| | |||||| |||||||    ||| ||||||||||    
T  45790357 ttgacttatttgaatttatctattgacataagtttt--atgagt--ttcggagaacttatgaaaataacttatgacaatttttaaaagc-tttttcagct 45790451  T
Q  714 tattttcataagtactccaatctagcttataaacacaactt 754  Q
    |||||||||||||  |||||| ||| ||||||| |||||||    
T  45790452 tattttcataagttatccaatatagtttataaaaacaactt 45790492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 648 - 733
Target Start/End: Original strand, 38499874 - 38499959
Alignment:
Q  648 ttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 733  Q
    |||| |||||| |||||||||||  | ||||||||||||| || |||||   ||| |||| |||||||||||||||||| ||||||    
T  38499874 ttgcgagactctttgggagaacttttcaaaacagcttatgacatttttcataagctttttccagcttattttcataagttctccaa 38499959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 336 - 392
Target Start/End: Original strand, 597862 - 597918
Alignment:
Q  336 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaa 392  Q
    ||||||||||||||| | ||||||||||||| | ||||||| ||| |||||||||||    
T  597862 tttttagtgaattgagtatgtaaaattgattttggctaaaactgagttgaaggtaaa 597918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 513
Target Start/End: Complemental strand, 1411026 - 1410942
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |||| |||||||||| || || ||||| ||  || || || |||||| |||||||||||||||||||||||| ||||    
T  1411026 aaatttgcgtgtgaaaatcaattctaaaaacaaaatctacaaattataacttcaaatagaatcaattctaaaggcaaaattaatt 1410942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 816 - 868
Target Start/End: Original strand, 21568772 - 21568824
Alignment:
Q  816 gcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||||||||||||||| | |||||| || |||| |||||||||||||||    
T  21568772 gcttatcatgataagcacttatgctataagctgcaaacaagctgtttatccaa 21568824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 598 - 650
Target Start/End: Complemental strand, 33673236 - 33673184
Alignment:
Q  598 ctagggcctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    ||||||||| |||||||||||||||||||| ||||||| ||||| ||| ||||    
T  33673236 ctagggcctttttggattgactcatttgagcttatctactgacataagctttg 33673184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 429 - 513
Target Start/End: Original strand, 41386836 - 41386920
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |||| || ||||||| |||||| |||||||  || | |||||||||| ||||||||||||| ||||  |||||||||    
T  41386836 aaatttgtgtgtaaatatcaattctagaattaaaagctacaaatcctagcttcaagtagaatcaattctgaaggtgaaatcaatt 41386920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 801
Target Start/End: Original strand, 11700346 - 11700385
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaata 801  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  11700346 aaaacaatgtaactttattttatctttttctataaaaata 11700385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 422 - 513
Target Start/End: Original strand, 23441244 - 23441335
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||||||||| || ||||||||||  | |||||||||  | || ||||| ||  |||||||||||||| |  ||||||||||||||    
T  23441244 aaacaacaaatttgagggtcaaaatcaattccaaaatcaaaagtcccaacttctaactctaactagaatcaattatggaggcaaaatcaatt 23441335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 813 - 868
Target Start/End: Complemental strand, 40196306 - 40196251
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||| | | | || ||||||||||||||| |||||||||||    
T  40196306 agcgcttatcatgataagcgcatgtgctgtaaactacaaataagttgtttatccaa 40196251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 423 - 497
Target Start/End: Original strand, 597961 - 598034
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattct 497  Q
    ||||| |||||| ||||  | |||||||||||||||| ||||||  ||||| ||||||||| |||||||||||||    
T  597961 aacaataaattttagtgcaagaatcaattatagaatcgaaagctacaattt-tagcttcaagtagaatcaattct 598034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 660 - 754
Target Start/End: Original strand, 19214379 - 19214473
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||||| |||||||||||  ||| ||||||||   | | | ||||| ||||||||||||||| || |||| ||||||||| | |||||||    
T  19214379 ttgggagaacttatgaaaacagcaaatgacaattttcataaacttgtttcaacttattttcataagttctacaatatagcttatacaaacaactt 19214473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 660 - 734
Target Start/End: Complemental strand, 28614530 - 28614456
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaat 734  Q
    ||||||||||| ||||||||| | |||  |||||||| | ||| |||||||| ||| |||||||||| |||||||    
T  28614530 ttgggagaacttatgaaaacaacatataacaattttcacaagcttttttcagtttaatttcataagttctccaat 28614456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 444 - 494
Target Start/End: Original strand, 28725088 - 28725138
Alignment:
Q  444 aatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaat 494  Q
    |||||||||||||||||||||||  || |||||||||||| || |||||||    
T  28725088 aatcaattatagaatcaaaagctacaaattctagcttcaagtataatcaat 28725138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 604 - 650
Target Start/End: Complemental strand, 44822111 - 44822065
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    |||||||||||||||| ||||||||||||||  ||||| ||||||||    
T  44822111 cctgtttggattgacttatttgagtttatctgctgacataagttttg 44822065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 756 - 802
Target Start/End: Complemental strand, 45004762 - 45004716
Alignment:
Q  756 tatgcgaaaacaatttaactttgttttatctttttctataaaaatag 802  Q
    ||||| || ||||||||||||| ||||||||||| ||||||||||||    
T  45004762 tatgcaaatacaatttaactttattttatcttttgctataaaaatag 45004716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 704 - 746
Target Start/End: Original strand, 46280289 - 46280331
Alignment:
Q  704 tttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    ||||||||| ||||||||||||| ||||||| |||||||||||    
T  46280289 tttttcagcctattttcataagttctccaatatagcttataaa 46280331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 5489781 - 5489857
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 405  Q
    ||||||| |||| |||||||||||| ||| ||||||||||  | ||||||||| ||||| ||||||| | ||||||||    
T  5489781 aaaattggttttaagtgaattgattgtgt-aaattgattccggttaaaaatgagttgaatgtaaagttatttatgttt 5489857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 422 - 511
Target Start/End: Complemental strand, 23458130 - 23458041
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaa 511  Q
    |||||||||||||||| || |||||||||| || | |||||||  | || ||||| ||  |||||||||||||| |  ||||||||||||    
T  23458130 aaacaacaaatttgagggtcaaaatcaattctaaattcaaaagtcccaacttctaactctaactagaatcaattatggaggcaaaatcaa 23458041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 673 - 746
Target Start/End: Original strand, 30570917 - 30570990
Alignment:
Q  673 tgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    ||||||||||||||| ||||||||   ||| |||||||  ||| |||||||||| ||||||| ||| |||||||    
T  30570917 tgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaa 30570990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 35222115 - 35222074
Alignment:
Q  373 aaaaatgaattgaaggtaaagtgaattatgtttgtatacatt 414  Q
    |||||| | ||||||||||||||| |||||||||||||||||    
T  35222115 aaaaattagttgaaggtaaagtgatttatgtttgtatacatt 35222074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 684
Target Start/End: Complemental strand, 36517735 - 36517650
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 684  Q
    ||||||||||||||||| | | ||||||| ||| ||| || || |||||||  ||||||  ||||||||||| || ||||||||||    
T  36517735 tagggcctgtttggattcatttatttgagcttagctactggcataagttttctaagactgtttgggagaacttattaaaacagctt 36517650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 835
Target Start/End: Complemental strand, 40009460 - 40009387
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcactt 835  Q
    |||||||||||||||| |||| ||||||  |||||||| |||| ||  || |||||| ||||||||||| ||||    
T  40009460 aaaacaatttaactttattttgtcttttgttataaaaacagcttatacataagcgctaatcatgataagtactt 40009387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 345 - 410
Target Start/End: Original strand, 44856719 - 44856784
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtata 410  Q
    ||||||||| ||||| ||||||||  |||||| ||| ||||| |||||| || |||||||||||||    
T  44856719 aattgatttggtaaagttgattctgcctaaaagtgagttgaatgtaaagcgatttatgtttgtata 44856784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 762 - 799
Target Start/End: Complemental strand, 45264085 - 45264048
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaa 799  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  45264085 aaaacaatttaactttatttcatctttttctataaaaa 45264048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 4e-25; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 607 - 734
Target Start/End: Complemental strand, 9107240 - 9107113
Alignment:
Q  607 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcattt 706  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||  ||| |  |||||||||||||||||||||||||| | |||||||| | | | |||    
T  9107240 gtttggattgacttatttgagtttatctagtgacataagttttgtgagaatgtttgggagaactcatgaaaacagcttaggacaattttcacaaactttt 9107141  T
Q  707 ttcagcttattttcataagtactccaat 734  Q
    ||| ||| |||||||||||| |||||||    
T  9107140 ttctgctaattttcataagttctccaat 9107113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 605 - 868
Target Start/End: Original strand, 9202666 - 9202934
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 704  Q
    |||| |||||||||| ||||||| ||||||  || || |||||||| ||||||  || ||| |||| ||| |||||||||||| || | |||   |||      
T  9202666 ctgtatggattgacttatttgagcttatctcctggcataagttttgtaagactatttcggaaaactaatggaaacagcttatgacattgttcataagctg 9202765  T
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgt-----atgcgaaaacaatttaactttgttttatctttttctataaaaa 799  Q
    ||| |||||||||||||||||| || |||  || ||||| || ||| ||| |     ||  ||||||||||||||||| ||||||||||| ||| | |||    
T  9202766 tttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatcttttgctacagaaa 9202865  T
Q  800 tagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||| || ||| ||| ||||||||||||| ||||| | |||||| || |||||||| |||||||||||    
T  9202866 tagcttatatataagcacttatcatgataaacacttgtgctataagctgcaaataagatgtttatccaa 9202934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 600 - 743
Target Start/End: Original strand, 7705911 - 7706054
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    |||||||||||||||||||| |||||||  |||||| |  || ||||||||  |  ||| ||||||||||| |||||||||||||||| || ||||| |     
T  7705911 agggcctgtttggattgacttatttgagcatatctactagcataagttttgtgacgctctttgggagaacttatgaaaacagcttatgacagttttcacc 7706010  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttat 743  Q
     || |||||| ||||||||||| |||| ||||||| ||||||||    
T  7706011 tgcttttttcggcttattttcacaagttctccaatatagcttat 7706054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 600 - 746
Target Start/End: Original strand, 12857251 - 12857397
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||| |||||||||||  | ||||||| ||||||||||||  ||||||||  | |||  |  |||||||| ||||||||| |||||| |||||||| |     
T  12857251 agggcttgtttggattggtttatttgagcttatctattgacgtaagttttgtgaaacttttccggagaacttatgaaaacaacttatgacaattttcaca 12857350  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    ||| ||||||||||||||||  ||||| ||||||| |||||||||||    
T  12857351 agcttttttcagcttatttttgtaagttctccaatatagcttataaa 12857397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 600 - 746
Target Start/End: Original strand, 12857618 - 12857764
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||| |||||||||||  | ||||||| | ||||||||||  ||||||||  | |||  |  |||||||| ||||||||| |||||| |||||||| |     
T  12857618 agggcttgtttggattggtttatttgagctcatctattgacgtaagttttgtgaaactgttccggagaacttatgaaaacaacttatgacaattttcaca 12857717  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    | | ||||||||||||||||||||||| ||||||| |||||||||||    
T  12857718 accttttttcagcttattttcataagttctccaatatagcttataaa 12857764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 604 - 754
Target Start/End: Original strand, 16937800 - 16937950
Alignment:
Q  604 cctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagca 703  Q
    ||||||||||||| || ||||||| ||||||| |  || ||||||||  ||| |  |||| |||||| |||||||||||||||| ||| ||||   |||     
T  16937800 cctgtttggattggcttatttgagcttatctactagcataagttttgtgagagtgtttggaagaacttatgaaaacagcttatgacaaatttcataagct 16937899  T
Q  704 tttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||||||||||| ||||| ||||||| |||| |||||| |||||||    
T  16937900 tttttcagcttattttcctaagttctccaatatagcgtataaaaacaactt 16937950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 601 - 733
Target Start/End: Complemental strand, 10640109 - 10639977
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    |||||||||||||||  || ||||||||||||||| ||||| ||||||||  | | |  ||||||||||| |||||||||||||||| || |||||   |    
T  10640109 gggcctgtttggattagcttatttgagtttatctactgacataagttttgtgatattgtttgggagaacttatgaaaacagcttatgacatttttcataa 10640010  T
Q  701 gcatttttcagcttattttcataagtactccaa 733  Q
    || ||||  ||||||||||||||||| ||||||    
T  10640009 gctttttctagcttattttcataagttctccaa 10639977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 330 - 412
Target Start/End: Complemental strand, 14299498 - 14299416
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtataca 412  Q
    |||| ||||| |||||||||||| ||||||||||||||||| ||||| ||| ||||||||||||||| || |||||| |||||    
T  14299498 aatttattttgagtgaattgattgtgtaaaattgattctagataaaagtgagttgaaggtaaagtgatttgtgtttgaataca 14299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 760 - 861
Target Start/End: Complemental strand, 12425563 - 12425462
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctg 859  Q
    |||||||||||||||||| ||||||||||| ||||| |||||| | ||  || |||| |||||||||||| ||||| |||||||| || |||||||| ||    
T  12425563 cgaaaacaatttaactttattttatcttttactatataaatagtttatacataagcgtttatcatgataaacacttgtactataagctgcaaataagatg 12425464  T
Q  860 tt 861  Q
    ||    
T  12425463 tt 12425462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 607 - 856
Target Start/End: Complemental strand, 39105615 - 39105360
Alignment:
Q  607 gtttggattgactcatttgagtttatctattgacacaagttttgcaagactcctt-gggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    ||||||||||||| |||||||||||||||  |  | |||||||   |||||  || ||||||| | |||||||||||||||| || | |||   |||  |    
T  39105615 gtttggattgacttatttgagtttatctaggggtataagttttatgagacttttttgggagaatttatgaaaacagcttatgacattgttcataagctat 39105516  T
Q  706 tttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaactttgttttatctttttctataaaaat 800  Q
    ||| ||||||||||||||||| ||||||  |||||||| || |||  || ||     | |||||||||||||||||  ||| || |||  ||||| ||||    
T  39105515 ttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaaacaatttaacttcatttcatatttagctatagaaat 39105416  T
Q  801 agctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 856  Q
    |||| ||  || ||||||||||||||||||||||| | |||||| || ||||||||    
T  39105415 agcttatacataagcgcttatcatgataagcacttatgctataagctgcaaataag 39105360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 643 - 804
Target Start/End: Original strand, 16457935 - 16458100
Alignment:
Q  643 aagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagctta 742  Q
    ||||||||  |||||  ||||||||||| |||||||||||||||| || |||||   |||  ||||||| ||||||||| |||| ||||||| ||||| |    
T  16457935 aagttttgtgagactgtttgggagaacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctca 16458034  T
Q  743 taaacacaactt-----gtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    |||| |||||||      ||| | ||||||||||||  || ||||||||||| ||||||||||||||    
T  16458035 taaaaacaacttatagcatatacaaaaacaatttaa-gttattttatcttttgctataaaaatagct 16458100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 606 - 751
Target Start/End: Complemental strand, 32009844 - 32009698
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttc-tcgagcat 704  Q
    |||||||||||||  |||||||| ||||| |||||  ||||||||  |||||  |||| | |||| ||||||||||||| || |||||||| |  ||| |    
T  32009844 tgtttggattgacatatttgagtctatctgttgacctaagttttgtgagactatttggaaaaacttatgaaaacagcttgtgacaattttcataaagctt 32009745  T
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaa 751  Q
    |||| | ||| ||||||||||| ||||||| ||||||||||| ||||    
T  32009744 ttttgaacttgttttcataagttctccaatatagcttataaaaacaa 32009698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 660 - 804
Target Start/End: Complemental strand, 29925938 - 29925789
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgt--- 756  Q
    ||||||||||| |||||||||||||||| |||| |||  | |  ||||||| ||||||||||||||| ||||||| ||||||||  | ||||||| |       
T  29925938 ttgggagaacttatgaaaacagcttatgacaatgttcatgtgtttttttcaacttattttcataagttctccaatatagcttatgtaaacaacttatagc 29925839  T
Q  757 --atgcgaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
      || |  ||||||||||||  | ||||||||||| ||||||||||||||    
T  29925838 acatacagaaacaatttaacgctattttatcttttgctataaaaatagct 29925789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 437 - 514
Target Start/End: Original strand, 34250380 - 34250457
Alignment:
Q  437 gtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||| |||| ||||| ||||||||||||||  |||||||||| |||| |||||||||||||| ||||| |||||||||    
T  34250380 gtgtgaaaaacaattgtagaatcaaaagctacaatttctagcatcaagtagaatcaattctagaggcataatcaattc 34250457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 672 - 757
Target Start/End: Complemental strand, 37954771 - 37954686
Alignment:
Q  672 atgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta 757  Q
    ||||||||||||||||  |||||||   ||| ||||||| |||||||||||| || ||||||| ||||||||||| ||||||||||    
T  37954771 atgaaaacagcttatgaaaattttcattagcttttttcaacttattttcatatgttctccaatatagcttataaaaacaacttgta 37954686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 601 - 804
Target Start/End: Original strand, 42500157 - 42500347
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    ||||||||||||||||  | |||||   ||| ||| ||||| ||||||||  |||||| |||| |||||| ||| ||||| |||| | ||||||||   |    
T  42500157 gggcctgtttggattggtttatttggacttacctactgacataagttttgtgagactctttgg-agaacttatggaaacaacttacgacaattttcataa 42500255  T
Q  701 gcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaat 800  Q
    || ||||||| ||||||||||||||| ||||||| ||||||||| |||||           |||||||||||||||| |||||||||||  |||||||||    
T  42500256 gc-tttttcaacttattttcataagttctccaatatagcttatatacaca-----------aaaacaatttaactttattttatcttttgatataaaaat 42500343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 768 - 868
Target Start/End: Original strand, 1465105 - 1465205
Alignment:
Q  768 atttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatcca 867  Q
    |||||||||| ||||||| | | ||||| |||||||| ||  || |||||||||| |||||||||||| | ||||||||| | ||||| |||||||||||    
T  1465105 atttaactttattttatcctatgctatagaaatagcttatacataagcgcttatcttgataagcacttatgctataaactgcgaataatctgtttatcca 1465204  T
Q  868 a 868  Q
    |    
T  1465205 a 1465205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 442 - 513
Target Start/End: Original strand, 3738142 - 3738213
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||||||||||||||| ||  || ||||| |||||||||||||||||| |||||  ||||||||||    
T  3738142 aaaatcaattatagaatcaaaaactacaacttctaacttcaactagaatcaattttaaagttaaaatcaatt 3738213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 600 - 809
Target Start/End: Complemental strand, 39594964 - 39594751
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcg 699  Q
    ||||| |||||||||||||| ||||||| |||||||  |||| ||||||||  ||| |  |||||| |||| |||||||||||| | |  ||| || |      
T  39594964 agggcttgtttggattgacttatttgagcttatctaccgacataagttttgttagattgtttgggacaacttatgaaaacagctgaagataatgttatta 39594865  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaacacaacttg-----tatgcgaaaacaatttaactttgttttatctttttctat 794  Q
    ||   |||||||||||||||||||||| |  |||  || ||||| || ||| |||      ||||||||||||||||| |||| ||||||||||||||||    
T  39594864 agttgttttcagcttattttcataagttcaacaagatatcttatgaaaacagcttacaacttatgcgaaaacaattta-ctttattttatctttttctat 39594766  T
Q  795 aaaaatagctaatgt 809  Q
    | |||||||| ||||    
T  39594765 agaaatagcttatgt 39594751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 483
Target Start/End: Original strand, 24306110 - 24306171
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |  |||||||| ||||||    
T  24306110 aaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24306171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 422 - 483
Target Start/End: Complemental strand, 24367206 - 24367145
Alignment:
Q  422 aaacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    |||||| |||||||||||| ||||||||||||||||||||||| |  |||||||| ||||||    
T  24367206 aaacaataaatttgagtgtaaaaatcaattatagaatcaaaagttacaatttctaacttcaa 24367145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 42858172 - 42858087
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||| |||| ||||||||||||||||| |||||||| || | ||| |||||| || ||||||||||| || |||||| |||||    
T  42858172 aaatttgtgtgtgaaaatcaattatagaattaaaagctccaaatcctaacttcaagtaaaatcaattctagagtcaaaatgaattc 42858087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 772 - 868
Target Start/End: Complemental strand, 28776955 - 28776859
Alignment:
Q  772 aactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||| ||||||||||||| |||||||||||| ||  || ||| ||||||||||||||  |||   |||||| || |||||||| |||||||||||    
T  28776955 aactttattttatctttttcaataaaaatagcttatacataagcacttatcatgataagtgcttaggctataagctgcaaataagttgtttatccaa 28776859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 601 - 733
Target Start/End: Complemental strand, 40426921 - 40426789
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcga 700  Q
    |||||||||| | |||||| ||||||| ||||||| ||||| || |||||  |||||  ||||| |  || |||||||||||||||| || |||||   |    
T  40426921 gggcctgttttggttgacttatttgagcttatctaatgacataaattttgtgagactgtttgggggtgcttatgaaaacagcttatgccatttttcataa 40426822  T
Q  701 gcatttttcagcttattttcataagtactccaa 733  Q
    || ||||| ||||||||||| ||||| ||||||    
T  40426821 gcttttttaagcttattttcgtaagttctccaa 40426789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 726
Target Start/End: Original strand, 3735131 - 3735197
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagt 726  Q
    |||| |||||| |||||||||||||||| ||||||||   ||| ||||||||||||| |||||||||    
T  3735131 ttggtagaactgatgaaaacagcttatgacaattttcaaaagcttttttcagcttatcttcataagt 3735197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 571
Target Start/End: Complemental strand, 10898791 - 10898644
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattcaagtgga 521  Q
    ||||| ||||||| |||| |||||||||||  || |||| | ||| |||||||  |||||| | ||||||||||||| ||||||||||||||  | | ||    
T  10898791 aacaataaatttgtgtgtaaaaatcaatta--gattcaataactccaatttcttacttcaagttagaatcaattctagaggcaaaatcaattttactcga 10898694  T
Q  522 aagcaaccaaacttgttatactcaattctaccgctatagaatcaattttg 571  Q
     ||||||||||| ||| | | | ||||| || ||| ||||||||||||||    
T  10898693 gagcaaccaaacatgtcaaaattaattcgacagctctagaatcaattttg 10898644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 469 - 511
Target Start/End: Complemental strand, 14299765 - 14299723
Alignment:
Q  469 aatttctagcttcaactagaatcaattctaaaggcaaaatcaa 511  Q
    |||||||||||||||||| ||||||||||| ||||||||||||    
T  14299765 aatttctagcttcaactaaaatcaattctataggcaaaatcaa 14299723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 762 - 868
Target Start/End: Original strand, 19460466 - 19460572
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||||||||||||| ||  || ||||  |||| |||||| | ||  || || ||||||||||||||||| || | |||||| || |||||||||||||    
T  19460466 aaaacaatttaactttattcaatgttttgatatagaaatagtttatacataagtgcttatcatgataagcatttgtgctataagctgcaaataagctgtt 19460565  T
Q  862 tatccaa 868  Q
    |||||||    
T  19460566 tatccaa 19460572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 600 - 650
Target Start/End: Complemental strand, 35299922 - 35299872
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttg 650  Q
    |||||||||||||||||||| ||||||| |||||||||||||  |||||||    
T  35299922 agggcctgtttggattgacttatttgagcttatctattgacatgagttttg 35299872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 599 - 744
Target Start/End: Original strand, 3932588 - 3932733
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctc 698  Q
    ||||| ||||||||||||||| ||||||| |||||||   ||| ||| ||||  |||||  ||| || ||||    |||||||||||||  |||||||      
T  3932588 tagggactgtttggattgactaatttgagcttatctaacaacataagctttgtgagactgtttgagaaaacttgcaaaaacagcttatgataattttcat 3932687  T
Q  699 gagcatttttcagcttattttcataagtactccaatctagcttata 744  Q
     ||| |||| |||||||||||| ||||| ||||| |||||||||||    
T  3932688 aagctttttacagcttattttcgtaagttctccagtctagcttata 3932733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 705 - 837
Target Start/End: Original strand, 4014442 - 4014579
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaactttgttttatctttttctataaaaa 799  Q
    |||||||||||||||||||||| ||||||  |||||||| || ||| ||| |      | | |||||||| ||||||| ||||||||||| ||||| |||    
T  4014442 ttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatcttttgctatagaaa 4014541  T
Q  800 tagctaatgtatgagcgcttatcatgataagcacttct 837  Q
    ||||| ||  ||  |||||||||||||| ||| |||||    
T  4014542 tagcttatacataggcgcttatcatgatgagcgcttct 4014579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 514
Target Start/End: Complemental strand, 36640001 - 36639916
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||||| |||| ||||| |||||| | |||||  |||||| |||||||| ||||||| ||| |  |||||||||||||||    
T  36640001 aaatttgagtgtaaaaaacaattctagaattagaagctacaatttccagcttcaagtagaatctattttggaggcaaaatcaattc 36639916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 760 - 833
Target Start/End: Original strand, 42569058 - 42569131
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcac 833  Q
    |||||||||||  ||||| ||||||||||| ||||| ||||||||  |  || |||||||||||||||||||||    
T  42569058 cgaaaacaattagactttattttatcttttgctatagaaatagctttttcataagcgcttatcatgataagcac 42569131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 345 - 405
Target Start/End: Original strand, 5465398 - 5465458
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgttt 405  Q
    |||||||||||||||||||||| ||| ||||| ||||||||| | ||| ||| ||||||||    
T  5465398 aattgattttgtaaaattgattttagataaaagtgaattgaatgaaaaatgatttatgttt 5465458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 761 - 829
Target Start/End: Complemental strand, 7674639 - 7674571
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataa 829  Q
    ||||||||||||| ||| |||||||||||  |||| |||||||| || ||| || ||||||||||||||    
T  7674639 gaaaacaatttaaatttattttatcttttggtatagaaatagcttatatataagtgcttatcatgataa 7674571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 802
Target Start/End: Complemental strand, 14932280 - 14932240
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatag 802  Q
    |||||||||||||||| ||||||||||| ||||||||||||    
T  14932280 aaaacaatttaactttattttatcttttgctataaaaatag 14932240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 474 - 514
Target Start/End: Complemental strand, 29922075 - 29922035
Alignment:
Q  474 ctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  29922075 ctagcttcaactagaatcaattctacaagcaaaatcaattc 29922035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Complemental strand, 35446045 - 35445997
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    |||||||||||||||| ||||||| ||| |||||||||||||| |||||    
T  35446045 aaaacaatttaactttattttatcatttgctataaaaatagcttatgta 35445997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 762 - 865
Target Start/End: Complemental strand, 465944 - 465841
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||||||||||||| |||||||||||   ||| |||||||| || ||| || ||||||||||| | |  ||| |  |||||||| |||||||| ||||    
T  465944 aaaacaatttaactttattttatcttttgtcatagaaatagcttatatataagtgcttatcatgaaatgagcttatgttataaactgcaaataagttgtt 465845  T
Q  862 tatc 865  Q
    ||||    
T  465844 tatc 465841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 383
Target Start/End: Complemental strand, 707699 - 707644
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaatt 383  Q
    ||||||||||||  ||||||||||| ||||| |||||||| | |||||||||||||    
T  707699 aaaattgattttgcgtgaattgattatgtaagattgattccaactaaaaatgaatt 707644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 375
Target Start/End: Original strand, 4848064 - 4848111
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaa 375  Q
    |||||||||||| |||||||| || |||||| ||||||||||||||||    
T  4848064 aaaattgattttgagtgaattaatgttgtaagattgattctagctaaa 4848111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 424
Target Start/End: Original strand, 4975053 - 4975147
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    ||||| ||||| |||||||||||||| |||| |||||||||||||||| | ||||||| | ||| ||  ||||||||  ||||||| |||| ||||    
T  4975053 aaattaattttcagtgaattgattttataaa-ttgattctagctaaaattaaattgaaagcaaaatgctttatgttttgatacattcatatgaaaa 4975147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 329 - 424
Target Start/End: Original strand, 6095243 - 6095338
Alignment:
Q  329 aaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    ||||| ||||| ||| |||||||||  ||||||||||||||| ||| ||||| ||||  | ||| ||| ||||||||| ||| |||||| ||||||    
T  6095243 aaattaattttgagtaaattgatttgataaaattgattctagataataatgagttgattgaaaaatgatttatgtttgaatatatttatgtaaaaa 6095338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 767 - 810
Target Start/End: Complemental strand, 9107097 - 9107054
Alignment:
Q  767 aatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||||| |||||||||||||| ||||||||||| |||||    
T  9107097 aatttaactttattttatctttttctttaaaaatagcttatgta 9107054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 14671198 - 14671104
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||| ||||||| | |||||||||||||| ||||||||| | ||||||| ||||||||| || |||| | ||||||||| || |||| || |||||    
T  14671198 aaaaatgattttgaatgaattgattttgtgaaattgattatggctaaaagtgaattgaatgtgaagt-atttatgtttggatgcattcatgtaaaa 14671104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 638
Target Start/End: Complemental strand, 29336784 - 29336749
Alignment:
Q  603 gcctgtttggattgactcatttgagtttatctattg 638  Q
    ||||||||||||||| ||||||||||||||||||||    
T  29336784 gcctgtttggattgaatcatttgagtttatctattg 29336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 341 - 404
Target Start/End: Original strand, 35138947 - 35139010
Alignment:
Q  341 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtt 404  Q
    |||||||||||| |||||| ||||||||  |||||| ||| ||||||||||| ||| |||||||    
T  35138947 agtgaattgattatgtaaacttgattctgtctaaaattgagttgaaggtaaaatgatttatgtt 35139010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 470 - 513
Target Start/End: Original strand, 35139093 - 35139136
Alignment:
Q  470 atttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    |||||||||||||| || ||||||||||| ||||||||||||||    
T  35139093 atttctagcttcaagtaaaatcaattctagaggcaaaatcaatt 35139136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 442 - 533
Target Start/End: Original strand, 43310574 - 43310665
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaac 533  Q
    |||||||||| || |||||||||||  |||||||| |||||| ||  | |||||||||| | ||||||||||| | | |||| |||||||||    
T  43310574 aaaatcaattctataatcaaaagctacaatttctatcttcaaataacaacaattctaaaagtaaaatcaattctactcgaaaacaaccaaac 43310665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 341 - 423
Target Start/End: Original strand, 117420 - 117502
Alignment:
Q  341 agtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||||| ||||| |||||||||  ||| || ||| ||||||||||| ||| | ||||||| |||||| ||| |||||    
T  117420 agtgaattgattatgtaatattgattctgactagaagtgagttgaaggtaaaatgattcatgtttggatacatctatgtaaaa 117502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 2124282 - 2124244
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgatt 366  Q
    |||||||||||| || |||||||||||||||||||||||    
T  2124282 aaaattgattttaagagaattgattttgtaaaattgatt 2124244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 804
Target Start/End: Original strand, 37112338 - 37112380
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    |||||||||||||||||||||||||||| || || ||||||||    
T  37112338 aaaacaatttaactttgttttatcttttgctgtagaaatagct 37112380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 762 - 867
Target Start/End: Complemental strand, 39248090 - 39247984
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaa-ctacaaataagctgt 860  Q
    |||||||||||| ||| |||||   ||| ||||| ||||||||  |  || |||||||||||| ||||||| || | ||||||| || ||||||||||||    
T  39248090 aaaacaatttaaatttattttagtatttgctatagaaatagcttttacataagcgcttatcatcataagcaattatgctataaagctgcaaataagctgt 39247991  T
Q  861 ttatcca 867  Q
    |||||||    
T  39247990 ttatcca 39247984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 700 - 754
Target Start/End: Complemental strand, 43300935 - 43300881
Alignment:
Q  700 agcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||| ||||||||||||||||||||| ||||||  ||||||| ||| |||||||    
T  43300935 agcatgtttcagcttattttcataagttctccaagatagcttacaaaaacaactt 43300881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 514
Target Start/End: Complemental strand, 7667645 - 7667588
Alignment:
Q  458 tcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattc 514  Q
    |||||||||| || |||||||||||| | |||||||||||| |||||||| |||||||    
T  7667645 tcaaaagctccaaattctagcttcaagttagaatcaattctgaaggcaaagtcaattc 7667588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 426 - 495
Target Start/End: Original strand, 18585325 - 18585394
Alignment:
Q  426 aacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    ||||||||||| | ||||||| |||| |||| ||||||||| |||||| |||||| || || ||||||||    
T  18585325 aacaaatttgattattaaaataaattttagattcaaaagctttaatttttagcttgaagtaaaatcaatt 18585394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 514
Target Start/End: Complemental strand, 33608555 - 33608482
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaact-agaatcaattctaaaggcaaaatcaattc 514  Q
    |||||| ||| |||||| |||| ||| || |||||||||||| | |||||||||||| ||||||||| ||||||    
T  33608555 aaaatccattctagaatgaaaaactccaacttctagcttcaagttagaatcaattctcaaggcaaaaccaattc 33608482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 621 - 686
Target Start/End: Original strand, 35445778 - 35445843
Alignment:
Q  621 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttat 686  Q
    ||||||||||||||| ||||| ||||||||  |||||| |||  |||| | |||||||||||||||    
T  35445778 atttgagtttatctactgacataagttttgtgagactctttgacagaatttatgaaaacagcttat 35445843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 483
Target Start/End: Complemental strand, 36927785 - 36927744
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    |||||||||| |||||| ||||||||||| ||||||||||||    
T  36927785 aaaatcaattttagaattaaaagctctaaattctagcttcaa 36927744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 602 - 635
Target Start/End: Original strand, 40335788 - 40335821
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatcta 635  Q
    |||||||||||||||||| |||||||||||||||    
T  40335788 ggcctgtttggattgacttatttgagtttatcta 40335821  T

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Target: chr1 (Bit Score: 55; Significance: 4e-22; HSPs: 65)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 10324953 - 10325043
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||| |||||||||||| |||||||||||||||||||||||||  |||||||| |||||| |||| ||||||||| ||||||||| ||||    
T  10324953 aacaataaatttgagtgtaaaaatcaattatagaatcaaaagctacaatttctatcttcaagtagactcaattctagaggcaaaattaatt 10325043  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 612 - 754
Target Start/End: Complemental strand, 49938892 - 49938750
Alignment:
Q  612 gattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcag 711  Q
    |||||||| |||||||||||| |  || || ||||||||  ||| |  ||||||||||| |||||||||||||||| ||||||||   ||| |||||||     
T  49938892 gattgacttatttgagtttatatcgtggcataagttttgtgagattgtttgggagaacttatgaaaacagcttatgacaattttcaaaagcttttttcaa 49938793  T
Q  712 cttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||||||||| ||| ||| ||||||||||| |||||||    
T  49938792 cttattttcataagttctctaatatagcttataaaaacaactt 49938750  T

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Target: chr1; HSP #3
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 330 - 491
Target Start/End: Complemental strand, 3515979 - 3515820
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaaca 429  Q
    ||||| |||| |||||||||||| ||||||||||||||| |  |||| ||| |||||||| |||||| || |||||| |||||||||  |   ||  | |    
T  3515979 aattggttttgagtgaattgattatgtaaaattgattctggtgaaaattgagttgaaggtgaagtgatttgtgtttggatacatttagtt--gaatgata 3515882  T
Q  430 aatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatc 491  Q
    | ||||||||| |||||||||| |||||| |||||||  ||||||||||||||| |||||||    
T  3515881 attttgagtgtaaaaatcaattctagaatgaaaagctacaatttctagcttcaagtagaatc 3515820  T

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Target: chr1; HSP #4
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 762 - 868
Target Start/End: Complemental strand, 30581792 - 30581686
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtt 861  Q
    |||||||||||||||| ||| ||| |||||||||||||||||| |||||| |  ||||||||||| ||| |||| | |||||| || ||||||| |||||    
T  30581792 aaaacaatttaactttatttcatcgttttctataaaaatagcttatgtataactgcttatcatgaaaagtacttgttctataagctgcaaataaactgtt 30581693  T
Q  862 tatccaa 868  Q
    |||||||    
T  30581692 tatccaa 30581686  T

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Target: chr1; HSP #5
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 605 - 754
Target Start/End: Original strand, 3233933 - 3234082
Alignment:
Q  605 ctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcat 704  Q
    ||||||||||||||| ||||||| ||||||| || |  ||||||||  |||||  | ||||||||| ||||||||| |||||  || |||||   ||  |    
T  3233933 ctgtttggattgacttatttgagcttatctagtgccgtaagttttgtgagactgttagggagaacttatgaaaacaacttataacagttttcataagttt 3234032  T
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    |||||  ||||||||||||||| ||||||| ||||||||||| |||||||    
T  3234033 ttttctacttattttcataagttctccaatatagcttataaaaacaactt 3234082  T

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Target: chr1; HSP #6
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 602 - 746
Target Start/End: Complemental strand, 2295251 - 2295107
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    |||||||||| |||| || ||||||| ||||||| || || ||||||||  |||||  ||||||||||| |||||||||||||||| ||||||||   ||    
T  2295251 ggcctgtttgaattggcttatttgagcttatctactggcataagttttgtgagactgtttgggagaacttatgaaaacagcttatgacaattttcataag 2295152  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    |  | |||| |||||||||| |||| |||  || |||||||||||    
T  2295151 ctctattcaacttattttcacaagttctctgatatagcttataaa 2295107  T

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Target: chr1; HSP #7
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 433 - 537
Target Start/End: Complemental strand, 6021864 - 6021760
Alignment:
Q  433 ttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaa 532  Q
    |||||||| |||||| ||||||||||||||||||  |  | |||||||||| ||||||| |||||| ||||||||||||||| | | |||| ||| ||||    
T  6021864 ttgagtgtaaaaatctattatagaatcaaaagctacatatcctagcttcaagtagaatcgattctagaggcaaaatcaattctacttgaaatcaatcaaa 6021765  T
Q  533 cttgt 537  Q
    |||||    
T  6021764 cttgt 6021760  T

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Target: chr1; HSP #8
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 667 - 810
Target Start/End: Original strand, 37631539 - 37631687
Alignment:
Q  667 aactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgtat-----gcg 761  Q
    |||| ||||||||||||| || |||||||| | ||| ||||||||||||||||||||||| ||||||| ||||||| ||| ||| ||  |||      |     
T  37631539 aacttatgaaaacagcttctgacaattttcacaagcttttttcagcttattttcataagttctccaatatagcttacaaaaacagctaatatcatacaca 37631638  T
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||||||| |||  |||||||||| |||||||| |||||| |||||    
T  37631639 aaaacaatttagcttcattttatctttctctataaagatagcttatgta 37631687  T

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Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 429 - 532
Target Start/End: Original strand, 28083909 - 28084012
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaac 528  Q
    ||||||| |||| ||||| |||||||||||||||||||  || |||||||||||| |||||||||||   ||| |||||||||||| | | |||| ||||    
T  28083909 aaatttgtgtgtaaaaattaattatagaatcaaaagctacaaattctagcttcaagtagaatcaattacgaagacaaaatcaattctactcgaaaacaac 28084008  T
Q  529 caaa 532  Q
    ||||    
T  28084009 caaa 28084012  T

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Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 680 - 810
Target Start/End: Complemental strand, 47432172 - 47432038
Alignment:
Q  680 agcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaacttgta-----tgcgaaaacaatttaac 774  Q
    ||||||||  ||||||| | ||| ||||||||||||||||||||| | || |||| || |||||||| ||| ||| ||     | | |||||||||||||    
T  47432172 agcttatggtaattttcacaagcttttttcagcttattttcataaattcttcaatataacttataaa-acaccttatagcatattcaaaaacaatttaac 47432074  T
Q  775 tttgttttatctttttctataaaaatagctaatgta 810  Q
    ||| |||||||||||||||||||||||||| |||||    
T  47432073 tttattttatctttttctataaaaatagcttatgta 47432038  T

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Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 814 - 868
Target Start/End: Complemental strand, 6556946 - 6556892
Alignment:
Q  814 gcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||||    
T  6556946 gcgcttatcatgataagcacttgtgctataaactacaaagaagctgtttatccaa 6556892  T

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Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 766 - 856
Target Start/End: Original strand, 9572192 - 9572282
Alignment:
Q  766 caatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcacttctactataaactacaaataag 856  Q
    |||||||||||| ||||||||||| ||||| |||||||||||  || |||||| ||||||||| |||||| | |||||| || ||||||||    
T  9572192 caatttaactttattttatcttttgctatagaaatagctaatacattagcgctgatcatgataggcacttgtgctataagctgcaaataag 9572282  T

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Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 660 - 746
Target Start/End: Original strand, 51929512 - 51929598
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    ||||||||| |||||||||||||||||| ||||||||   ||| ||||||| ||||||| ||||||| ||||||| ||| |||||||    
T  51929512 ttgggagaattcatgaaaacagcttatgacaattttcataagcttttttcaacttatttccataagttctccaatatagtttataaa 51929598  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 436 - 533
Target Start/End: Original strand, 47892416 - 47892513
Alignment:
Q  436 agtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaac 533  Q
    |||||||||||||||| ||||||||||||||  |||||||||||| || |||||||| |||||   | ||||||||||| | |  |||||||||||||    
T  47892416 agtgttaaaatcaattctagaatcaaaagcttcaatttctagctttaagtagaatcagttctaggtgaaaaatcaattctactcaaaagcaaccaaac 47892513  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 423 - 495
Target Start/End: Original strand, 20026179 - 20026251
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    ||||| ||||||||||||| ||||||||| |||| | |||||||  ||||||||||||||| |||||||||||    
T  20026179 aacaataaatttgagtgttcaaatcaattctagagttaaaagcttgaatttctagcttcaagtagaatcaatt 20026251  T

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Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 332 - 483
Target Start/End: Complemental strand, 33693172 - 33693031
Alignment:
Q  332 ttgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaacaacaaa 431  Q
    |||||||| |||||||||||| | |||||||| |||  | |||||  || ||||| ||||||||| ||||||||| ||||||| || |           |    
T  33693172 ttgattttaagtgaattgattctataaaattgtttccggttaaaagcgagttgaacgtaaagtgatttatgtttggatacattcatgt----------ca 33693083  T
Q  432 tttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa 483  Q
    ||||||||| |||||||||||||||||||||||||  |||||||||||||||    
T  33693082 tttgagtgtaaaaatcaattatagaatcaaaagctacaatttctagcttcaa 33693031  T

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Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 813 - 868
Target Start/End: Original strand, 5894294 - 5894349
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||||||| | |||||| || ||||||||||||||||||||    
T  5894294 agcgcttatcatgataagcacttgtgctataagcttcaaataagctgtttatccaa 5894349  T

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Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 11817228 - 11817323
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||||  || |||||| |||| ||| || | |||| ||||||| || |||||    
T  11817228 aaaattgagtttgagtgaattgattttgtaaaattgattctaactaaaagcgagttgaagataaaatgatttttatttgaatacattaatgtaaaa 11817323  T

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Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 606 - 868
Target Start/End: Original strand, 27146174 - 27146434
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatt 705  Q
    |||||||||||||| ||||||| |||||||||| || ||||||||  |||||  |||| |||||| | | ||||| |||||| || | |||   |||  |    
T  27146174 tgtttggattgactgatttgagcttatctattggcataagttttgtgagacttgttggaagaacttaaggaaacaacttatgacattgttcataagctgt 27146273  T
Q  706 tttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagcta 805  Q
    ||||| |||| |||| ||||| || |||  ||| ||| ||| | ||||  ||| |||||  ||||||| ||| ||||||||||| || || ||||| ||     
T  27146274 tttcaacttactttcgtaagttcttcaagatagtttacaaaaataact--tatacgaaactaatttaaatttattttatcttttgctgtagaaatacctt 27146371  T
Q  806 atgtatgagcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||  || | |||||||||||||| | |||| | |||||| || |||||||||| |||||||||    
T  27146372 atacataaacgcttatcatgatatgtacttatgctataagctgcaaataagctatttatccaa 27146434  T

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Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 621 - 804
Target Start/End: Complemental strand, 29904887 - 29904707
Alignment:
Q  621 atttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttc 720  Q
    ||||||| ||||||| |  || ||||||||  |||||  ||| ||||||| || ||||||||||||| ||||||||   ||| ||||||| |||||||||    
T  29904887 atttgagcttatctacttgcataagttttgtgagactgtttgagagaacttataaaaacagcttatggcaattttcaaaagcttttttcaccttattttc 29904788  T
Q  721 ataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    |||||| ||  ||| ||| |||||||   |||||  |   | ||||| ||||| ||| ||||||||||| ||||||||||||||    
T  29904787 ataagttctataatatagtttataaaattaacttaca---gcaaacattttaaatttattttatcttttgctataaaaatagct 29904707  T

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Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 330 - 406
Target Start/End: Complemental strand, 13344913 - 13344837
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttg 406  Q
    |||||||||| | ||||||||||||||| |||||||| | | ||||| ||| ||||| ||||||||| |||||||||    
T  13344913 aattgattttgattgaattgattttgtagaattgattttggttaaaagtgagttgaacgtaaagtgatttatgtttg 13344837  T

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Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 602 - 746
Target Start/End: Original strand, 14576569 - 14576712
Alignment:
Q  602 ggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaattttctcgag 701  Q
    ||||||||||||||| || ||||||| ||||||| || |  || |||||    |||  |||||| ||||  ||||||||||||||| ||||||||   ||    
T  14576569 ggcctgtttggattggcttatttgagcttatctactggcttaaattttgtggcactgtttgggacaacttgtgaaaacagcttatgacaattttcaaaag 14576668  T
Q  702 catttttcagcttattttcataagtactccaatctagcttataaa 746  Q
    | |||||||||||||||||| |||| ||| ||| |||||||||||    
T  14576669 cttttttcagcttattttca-aagttctctaatatagcttataaa 14576712  T

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Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 664 - 744
Target Start/End: Complemental strand, 15477658 - 15477578
Alignment:
Q  664 gagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttata 744  Q
    ||||||| |||||||||||||||| ||||||||   ||| ||||||||||||| ||||||||| ||| ||| || ||||||    
T  15477658 gagaacttatgaaaacagcttatgacaattttcaaaagcttttttcagcttatattcataagttctctaatataacttata 15477578  T

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Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 662 - 754
Target Start/End: Original strand, 17603359 - 17603451
Alignment:
Q  662 gggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||| | |||||||||||||| ||||||||   | | |||| || |||||||||| |||| ||||||| ||||||||||| |||||||    
T  17603359 gggagaacttacgaaaacagcttatgacaattttcataaactttttacaacttattttcagaagttctccaatatagcttataaaaacaactt 17603451  T

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Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 705 - 830
Target Start/End: Complemental strand, 15784381 - 15784257
Alignment:
Q  705 ttttcagcttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatcttttt-ctataaaaatagc 803  Q
    |||| |||||||||||| |||| ||||||  |||||||||||  || ||| ||  |||||||||||||||||| ||||| |||||| || || |||||||    
T  15784381 tttttagcttattttcacaagttctccaagatagcttataaaaccagcttata--cgaaaacaatttaactttattttacctttttactttagaaatagc 15784284  T
Q  804 taatgtatgagcgcttatcatgataag 830  Q
    | ||  || |||||||||||| |||||    
T  15784283 ttatacataagcgcttatcataataag 15784257  T

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Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 423 - 498
Target Start/End: Original strand, 28287351 - 28287426
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 498  Q
    ||||| ||||||||||||||||||||||| || |||||||||||  || | || ||||||| ||||| ||||||||    
T  28287351 aacaataaatttgagtgttaaaatcaattctaaaatcaaaagctacaaatccttgcttcaagtagaaccaattcta 28287426  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 813 - 868
Target Start/End: Original strand, 33541849 - 33541904
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||| ||||| | ||||||||| |||||||| |||||||||||    
T  33541849 agcgcttatcatgataaacacttgtgctataaactgcaaataagttgtttatccaa 33541904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 687
Target Start/End: Complemental strand, 38001752 - 38001665
Alignment:
Q  600 agggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatg 687  Q
    |||||||| ||||||   || ||||||||||||| | ||||| ||||||||  |||||  ||||||||||| ||||||||||||||||    
T  38001752 agggcctgcttggataagcttatttgagtttatcaactgacataagttttgtgagactgtttgggagaacttatgaaaacagcttatg 38001665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 813 - 868
Target Start/End: Original strand, 47498974 - 47499029
Alignment:
Q  813 agcgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||||||| | |||||| || |||||||| |||||||||||    
T  47498974 agcgcttatcatgataagcacttgtgctataagctgcaaataagttgtttatccaa 47499029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 817 - 868
Target Start/End: Complemental strand, 51688630 - 51688579
Alignment:
Q  817 cttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||||||||| |||||||| || |||||||| |||||||||||    
T  51688630 cttatcatgataagcacttgtactataagctgcaaataagttgtttatccaa 51688579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 660 - 754
Target Start/End: Complemental strand, 473260 - 473167
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttataaacacaactt 754  Q
    ||||||||||| ||||||| |||||||  ||||||||   ||| ||||||| ||||||||||||||| |||||||  | |||||||| |||||||    
T  473260 ttgggagaacttatgaaaaaagcttata-caattttcataagcttttttcaacttattttcataagttctccaatagaacttataaaaacaactt 473167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 423 - 513
Target Start/End: Original strand, 7790657 - 7790747
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||| ||||||| |||| |||||||||||||||||| ||| ||  || |  || |||||| ||||||||||||||||| ||| |||||||    
T  7790657 aacaataaatttgtgtgtaaaaatcaattatagaatctaaatctacaaatcataacttcaagtagaatcaattctaaagacaatatcaatt 7790747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 328 - 366
Target Start/End: Original strand, 22548210 - 22548248
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgatt 366  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  22548210 aaaattgattttaagtgaattgattttgtaaaattgatt 22548248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 429 - 567
Target Start/End: Complemental strand, 24587976 - 24587835
Alignment:
Q  429 aaatttgagtgttaaaatcaattat--agaatcaaaagctctaatttct-agcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagc 525  Q
    |||||||||||||||||||||||||  |||||||||||||| ||| ||| | |||||| |||||||| ||||   | |||| ||||||| | |  | |||    
T  24587976 aaatttgagtgttaaaatcaattatagagaatcaaaagctccaatatctaaacttcaagtagaatcagttctggcgtcaaagtcaattctactcaagagc 24587877  T
Q  526 aaccaaacttgttatactcaattctaccgctatagaatcaat 567  Q
    |||||||| ||| | | ||||||||||  || ||||||||||    
T  24587876 aaccaaacatgtcacaatcaattctacacctctagaatcaat 24587835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 606 - 684
Target Start/End: Original strand, 37617384 - 37617462
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctt 684  Q
    |||||||||||||| |||||||||||||||||| |  ||||||||  |||||  ||| ||||| | |||||||||||||    
T  37617384 tgtttggattgacttatttgagtttatctattgccgtaagttttgtgagactgtttgcgagaatttatgaaaacagctt 37617462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 330 - 368
Target Start/End: Complemental strand, 47899425 - 47899387
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattct 368  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  47899425 aattgattttgagtgaattgattttgtaaaattgattct 47899387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 423
Target Start/End: Complemental strand, 7524285 - 7524192
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||||||  ||||| ||||| | |||||||||||||| |||||| |||  | |||||||||||| || |||||| | |||||||| |||||    
T  7524285 aattgattttgggtgaactgattctataaaattgattctaactaaaagtgagctcaaggtaaagtgatttgtgtttggacacatttatgtaaaa 7524192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 456 - 513
Target Start/End: Complemental strand, 10325133 - 10325076
Alignment:
Q  456 aatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaatt 513  Q
    ||||||| |||| |||||||| |||||||||||| ||||||| |||| ||||||||||    
T  10325133 aatcaaatgctccaatttctaccttcaactagaaacaattctgaaggaaaaatcaatt 10325076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 11049314 - 11049245
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattcta 498  Q
    ||||||| |||| |||||||||| ||||||||||||||  || | |||||||||| ||||||| ||||||    
T  11049314 aaatttgtgtgtaaaaatcaattttagaatcaaaagctacaaatcctagcttcaagtagaatcgattcta 11049245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 815 - 868
Target Start/End: Complemental strand, 15477496 - 15477443
Alignment:
Q  815 cgcttatcatgataagcacttctactataaactacaaataagctgtttatccaa 868  Q
    ||||||||||||| |||||||  ||||||| ||||||||||||| |||||||||    
T  15477496 cgcttatcatgattagcacttgcactataagctacaaataagctctttatccaa 15477443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 346 - 423
Target Start/End: Original strand, 15514998 - 15515075
Alignment:
Q  346 attgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    ||||||||||| ||||||| ||||||||||| ||| |||||||||||| || ||||| ||| ||| ||| || |||||    
T  15514998 attgattttgtgaaattgagtctagctaaaagtgagttgaaggtaaagcgatttatgattggataaattcatgtaaaa 15515075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 428 - 473
Target Start/End: Complemental strand, 29759677 - 29759632
Alignment:
Q  428 caaatttgagtgttaaaatcaattatagaatcaaaagctctaattt 473  Q
    ||||||||||||| ||||||||||||||||||| |||||| |||||    
T  29759677 caaatttgagtgtaaaaatcaattatagaatcagaagctccaattt 29759632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 442 - 495
Target Start/End: Original strand, 48549046 - 48549099
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    |||||||||| |||||||| |||||  ||||||||||||||| |||||||||||    
T  48549046 aaaatcaattctagaatcagaagctacaatttctagcttcaagtagaatcaatt 48549099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 762 - 810
Target Start/End: Original strand, 30582028 - 30582076
Alignment:
Q  762 aaaacaatttaactttgttttatctttttctataaaaatagctaatgta 810  Q
    ||||||| |||||||| ||||||||||||||||||||||| || |||||    
T  30582028 aaaacaagttaactttattttatctttttctataaaaataccttatgta 30582076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 601 - 744
Target Start/End: Complemental strand, 33186462 - 33186318
Alignment:
Q  601 gggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgtcaa-ttttctcg 699  Q
    |||||||||||||||| || |||||||||||||  ||| || ||||||||  |||||   | |||||||| |||||||| | ||||| ||| |||||       
T  33186462 gggcctgtttggattggcttatttgagtttatccgttggcataagttttgtgagactgtctaggagaacttatgaaaactggttatgacaatttttcaaa 33186363  T
Q  700 agcatttttcagcttattttcataagtactccaatctagcttata 744  Q
    ||| |||||||||||||||  |||||| ||| ||| ||| |||||    
T  33186362 agcttttttcagcttatttatataagttctctaatatagattata 33186318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 328 - 368
Target Start/End: Complemental strand, 38512493 - 38512453
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattct 368  Q
    |||||||||||| |||||||||||||||||||||| |||||    
T  38512493 aaaattgattttaagtgaattgattttgtaaaattaattct 38512453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 344 - 411
Target Start/End: Complemental strand, 4347100 - 4347033
Alignment:
Q  344 gaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 411  Q
    |||||||||||||| |||||||| | | ||||| ||| ||||| ||||||||| ||||||||| ||||    
T  4347100 gaattgattttgtagaattgattttggttaaaagtgagttgaatgtaaagtgatttatgtttggatac 4347033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 780 - 835
Target Start/End: Complemental strand, 15942305 - 15942250
Alignment:
Q  780 tttatctttttctataaaaatagctaatgtatgagcgcttatcatgataagcactt 835  Q
    |||||||||||||||| |||||||| ||  || ||| |||||||||||||||||||    
T  15942305 tttatctttttctatataaatagcttatacataagcacttatcatgataagcactt 15942250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 761 - 828
Target Start/End: Original strand, 23544719 - 23544786
Alignment:
Q  761 gaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatgagcgcttatcatgata 828  Q
    ||||||||||| ||||  ||||||||||||| ||| |||||||| ||  || ||||||||||||||||    
T  23544719 gaaaacaatttgacttaattttatctttttccatagaaatagcttatacataagcgcttatcatgata 23544786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 345 - 424
Target Start/End: Original strand, 28464923 - 28465002
Alignment:
Q  345 aattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    ||||||||||| ||| ||||||||| ||||||  || ||||| ||||  ||| |||||||||| ||||||||| ||||||    
T  28464923 aattgattttgaaaatttgattctatctaaaagcgagttgaatgtaacatgatttatgtttgtgtacatttatgtaaaaa 28465002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 423
Target Start/End: Complemental strand, 35961534 - 35961447
Alignment:
Q  336 tttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||| ||| |||||||| |||||||| ||||   ||||||| ||| ||||||||||| ||| |||||||| |||||||| || |||||    
T  35961534 ttttgagtaaattgattctgtaaaatagattacggctaaaagtgagttgaaggtaaaatgatttatgtttctatacattcatgtaaaa 35961447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 49537246 - 49537195
Alignment:
Q  325 tttaaaattgatttttagtgaattgattttgtaaaattgattctagctaaaa 376  Q
    ||||||||||| ||| | ||||||||||||||||| ||| ||||||||||||    
T  49537246 tttaaaattgactttgaatgaattgattttgtaaagttgtttctagctaaaa 49537195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 606 - 685
Target Start/End: Original strand, 50644174 - 50644253
Alignment:
Q  606 tgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagctta 685  Q
    |||||||||||||| ||||||| ||||||| | ||| | ||||||  |||||  ||||||||||| ||||||||| ||||    
T  50644174 tgtttggattgacttatttgagcttatctactaacatatgttttgtgagactgtttgggagaacttatgaaaacaactta 50644253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 423 - 465
Target Start/End: Original strand, 213552 - 213594
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaagc 465  Q
    |||||||||||||||| | |||||||||| |||||||||||||    
T  213552 aacaacaaatttgagtttaaaaatcaattctagaatcaaaagc 213594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 429 - 498
Target Start/End: Complemental strand, 6574245 - 6574175
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaa-ctagaatcaattcta 498  Q
    |||||||||| | ||||| |||| || |||||||||||||||||| |||||| ||  ||||||||||||||    
T  6574245 aaatttgagtctgaaaattaattctacaatcaaaagctctaatttttagcttaaagttagaatcaattcta 6574175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 599 - 641
Target Start/End: Complemental strand, 26184901 - 26184859
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgaca 641  Q
    |||| |||||||||||||||| |||||||||| ||||||||||    
T  26184901 taggacctgtttggattgacttatttgagtttttctattgaca 26184859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 441 - 507
Target Start/End: Complemental strand, 29964151 - 29964085
Alignment:
Q  441 taaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaa 507  Q
    |||||| |||| |||||| || | ||||||||| ||||||||| ||||||||||| |||||| ||||    
T  29964151 taaaataaattttagaattaataactctaatttatagcttcaagtagaatcaattataaaggaaaaa 29964085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 429 - 495
Target Start/End: Original strand, 34387714 - 34387780
Alignment:
Q  429 aaatttgagtgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaatt 495  Q
    ||||||| |||| |||||||||||||||||||||||||  |||| | | |||||| || ||||||||    
T  34387714 aaatttgtgtgtgaaaatcaattatagaatcaaaagctgcaattcccaacttcaagtaaaatcaatt 34387780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 445 - 514
Target Start/End: Complemental strand, 3016210 - 3016142
Alignment:
Q  445 atcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||||||| ||||||||||||||  || |||||  ||||| ||||||||||| |||| |||||||||||||    
T  3016210 atcaattctagaatcaaaagctacaaattctaagttcaagtagaatcaattataaa-gcaaaatcaattc 3016142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 423 - 464
Target Start/End: Complemental strand, 17284166 - 17284125
Alignment:
Q  423 aacaacaaatttgagtgttaaaatcaattatagaatcaaaag 464  Q
    ||||| |||||||||||| |||||||||| ||||||||||||    
T  17284166 aacaataaatttgagtgtaaaaatcaattttagaatcaaaag 17284125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 424
Target Start/End: Complemental strand, 26382834 - 26382761
Alignment:
Q  351 ttttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaaa 424  Q
    |||| ||||||||||| ||  |||||||||||  || ||||| ||| ||||||||  |||||||||||||||||    
T  26382834 ttttataaaattgattataattaaaaatgaataaaatgtaaactgatttatgtttaaatacatttatataaaaa 26382761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 442 - 552
Target Start/End: Original strand, 31362239 - 31362345
Alignment:
Q  442 aaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattcaagtggaaagcaaccaaacttgttata 541  Q
    |||||||||| ||||||||||||||  || ||||| |||||    ||||||||| |  ||||||||||||||| |   |||||||||||||| ||||| |    
T  31362239 aaaatcaattctagaatcaaaagctacaaattctaacttca----gaatcaattatggaggcaaaatcaattctacatgaaagcaaccaaacatgttaga 31362334  T
Q  542 ctcaattctac 552  Q
     || |||||||    
T  31362335 gtcgattctac 31362345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 32369944 - 32370037
Alignment:
Q  330 aattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaaa 423  Q
    |||||||||| |||||||||||| |||| |||||||| |  |||| |||| |||||   |||||||| || |||||| ||||||| || |||||    
T  32369944 aattgattttgagtgaattgattgtgtagaattgattttgactaataatggattgattataaagtgatttgtgtttggatacattcatgtaaaa 32370037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 660 - 733
Target Start/End: Complemental strand, 37473500 - 37473427
Alignment:
Q  660 ttgggagaactcatgaaaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaa 733  Q
    |||||||||||  |||||||| |||||| || |||||   ||| |||| |||||||||||||||||| ||||||    
T  37473500 ttgggagaacttttgaaaacaacttatgacatttttcataagctttttccagcttattttcataagttctccaa 37473427  T

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Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 599 - 688
Target Start/End: Complemental strand, 38247485 - 38247396
Alignment:
Q  599 tagggcctgtttggattgactcatttgagtttatctattgacacaagttttgcaagactccttgggagaactcatgaaaacagcttatgt 688  Q
    ||||||||||||||||||  | ||||||  ||||||| || || ||||||||    |||  ||||||||||| |||||||||||||||||    
T  38247485 tagggcctgtttggattgggttatttgaacttatctactggcataagttttgtgtcactgtttgggagaacttatgaaaacagcttatgt 38247396  T

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Target: scaffold0361 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 347 - 514
Target Start/End: Original strand, 14044 - 14219
Alignment:
Q  347 ttgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatacatttatataaa---------aacaacaaatttgag 437  Q
    |||||||||||||||||||||| |||| || ||| ||||||||||||||| ||||||||| ||||||| || | ||         || || |||||||||    
T  14044 ttgattttgtaaaattgattcttgctacaattgagttgaaggtaaagtgatttatgtttggatacattcatgtgaaagtgagttgaaaaataaatttgag 14143  T
Q  438 tgttaaaatcaattatagaatcaaaagctctaatttctagcttcaactagaatcaattctaaaggcaaaatcaattc 514  Q
    ||| |||||||||| |||||||| |||||   ||| |||||||||| |||||||||||||   | ||||||||||||    
T  14144 tgtaaaaatcaattctagaatcataagct-agattgctagcttcaagtagaatcaattcttgtgacaaaatcaattc 14219  T

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Target: scaffold0024 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 713 - 830
Target Start/End: Original strand, 21311 - 21426
Alignment:
Q  713 ttattttcataagtactccaatctagcttataaacacaacttgtatgcgaaaacaatttaactttgttttatctttttctataaaaatagctaatgtatg 812  Q
    |||||||||||| | ||||||| |||||||| || ||| ||| ||  |||||||||||||||||| ||||||||||| |||||||||||||| ||  ||     
T  21311 ttattttcataatttctccaatatagcttatgaaaacagcttata--cgaaaacaatttaactttattttatcttttcctataaaaatagcttatacata 21408  T
Q  813 agcgcttatcatgataag 830  Q
    || |||||||||| ||||    
T  21409 agtgcttatcatggtaag 21426  T

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Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 760 - 804
Target Start/End: Complemental strand, 58929 - 58885
Alignment:
Q  760 cgaaaacaatttaactttgttttatctttttctataaaaatagct 804  Q
    |||||||||||||||||| ||||| ||||| ||||||||||||||    
T  58929 cgaaaacaatttaactttattttaacttttcctataaaaatagct 58885  T

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Target: scaffold0221 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 676 - 743
Target Start/End: Complemental strand, 22312 - 22245
Alignment:
Q  676 aaacagcttatgtcaattttctcgagcatttttcagcttattttcataagtactccaatctagcttat 743  Q
    |||||||||||| ||||||||   ||| |||||||||||||||||||||||  |||||  ||||||||    
T  22312 aaacagcttatgacaattttcgtaagcttttttcagcttattttcataagttttccaacatagcttat 22245  T

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Target: scaffold0172 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 15240 - 15323
Alignment:
Q  328 aaaattgatttttagtgaattgattttgtaaaattgattctagctaaaaatgaattgaaggtaaagtgaattatgtttgtatac 411  Q
    |||||||||||| |  ||||||||||||| ||||||||| | | ||||| ||| |||||  |||||||| ||||||||| ||||    
T  15240 aaaattgattttgatagaattgattttgtcaaattgattttggttaaaagtgagttgaatataaagtgatttatgtttggatac 15323  T

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