View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5745_low_15 (Length: 335)
Name: NF5745_low_15
Description: NF5745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5745_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 23 - 322
Target Start/End: Complemental strand, 25259910 - 25259608
Alignment:
| Q |
23 |
tgcagagccattagatctaagaaatagaaattcaaaactcatatctaactcaaaaatcaacagttatataggagtgtaggatccaaattcaaaaatgtca |
122 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||| |
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| T |
25259910 |
tgcagagccattagatctaagaaatagaaattcaaaactcatatctaactcaaaaatcaacagttatataggagtgcaggatccaaaatcaaaaatgtca |
25259811 |
T |
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| Q |
123 |
aaattaccactaaattgatgatcataaataaagctatcttcaaactaaattgagagttcatagaacaaacctctaaaacaagcattgcttgatgtgagga |
222 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25259810 |
aaattaccactaaattgatgatcataaataaagctatcttcaaactaaattgagagttcatagaacaaacctctaaaacaagcattgcttgatgtgagga |
25259711 |
T |
|
| Q |
223 |
agaaacaatacaaaatagttagctctat---caactaaccaaagaaactactacatgtcttctcttgtaagcttatcaagcaaagcagtgattaattcat |
319 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25259710 |
agaaacaatacaaaatagttagctctattagcaactaaccaaagaaactactacatgtcttctcttgtaagcttatcaagcaaagcagtgattaattcat |
25259611 |
T |
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| Q |
320 |
ctc |
322 |
Q |
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||| |
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| T |
25259610 |
ctc |
25259608 |
T |
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