View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746-Insertion-7 (Length: 259)
Name: NF5746-Insertion-7
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746-Insertion-7 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 8 - 259
Target Start/End: Original strand, 31319959 - 31320230
Alignment:
| Q |
8 |
cttatttcctttaaatccatttttcttttgaagagatggacaatcaacattgatatgaccgtgttttacacactcaaaacaagtc--------------- |
92 |
Q |
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| T |
31319959 |
cttatttcctttaaatccatttttcttttgaagagatggacaatcaacattgatatgaccgtgttttacaaactcaaaacaagtgaagttttgatttgat |
31320058 |
T |
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| Q |
93 |
-----tctttccttattcttcacaagtctctttccttgaacaaatttgattgtcttgtctttctttaagaattttcttannnnnnnagtttcaactcatg |
187 |
Q |
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| T |
31320059 |
gttaatgtttccttattcttcacaagtctctttccttgaacaaatttgattgtcttgtctttctttaagaattttcttatttttttagtttcaactcatg |
31320158 |
T |
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| Q |
188 |
ttcttgcagttttccaaatagtgccgccagtgacatttttcctagggattttattttctgaaatggttgtcg |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31320159 |
ttcttgcagttttccaaatagtgccgccagtgacatttttcctagggattttattttctgaaatggttgtcg |
31320230 |
T |
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