View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746-Insertion-8 (Length: 120)
Name: NF5746-Insertion-8
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746-Insertion-8 |
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| [»] chr3 (1 HSPs) |
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Alignment Details
Target: chr3 (Bit Score: 110; Significance: 7e-56; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 110; E-Value: 7e-56
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 1178937 - 1179050
Alignment:
| Q |
7 |
acagcaaactaataaattttgaagcattacctcaggagacatgtggatttgcatatcttgttcatttcgcccttcatcgaattcattctctaaatcatca |
106 |
Q |
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| T |
1178937 |
acagcaaactaataaattttgaagcattacctcaggagacatggggatttgcatatcttgttcatttcgcccttcatcgaattcattctctaaatcatca |
1179036 |
T |
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| Q |
107 |
atgtcatcttcctc |
120 |
Q |
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| T |
1179037 |
atgtcatcttcctc |
1179050 |
T |
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