View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746_high_108 (Length: 217)
Name: NF5746_high_108
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746_high_108 |
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Alignment Details
Target: chr8 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 19 - 207
Target Start/End: Complemental strand, 37504046 - 37503858
Alignment:
| Q |
19 |
cacctgtgatcaatgatgctgcagaggtgagtatcacagtcactgatcaacttgattcaatttcaaatatttctgttgagactcagaatcaaggacatac |
118 |
Q |
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| T |
37504046 |
cacctgttatcaatgatgctgcagaggtgagtatcacagtcactgatcaacttgattcaatttcaaatatttctggtgacactcagaatcaaggacatac |
37503947 |
T |
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| Q |
119 |
agaaagctctgataatgctgttgggagaggattagggtcacataatgtaggagagtttgatattattattagagtagataatgatgatg |
207 |
Q |
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| T |
37503946 |
agaaagctctgataatgctgttgggagaggattagggtcacataatgtaggagagtttgatattattattagagtagataatgatgatg |
37503858 |
T |
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