View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746_high_69 (Length: 282)
Name: NF5746_high_69
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746_high_69 |
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Alignment Details
Target: chr7 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 42223909 - 42224173
Alignment:
| Q |
1 |
ttaagatccatttttatttcaaaacaattcatatagaaaaatctgtaacaagaaagttaattacctcaacagagccatttgtgaccgtgtaacgagtgta |
100 |
Q |
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| T |
42223909 |
ttaagatccatttttatttcaaaacaattcatatagaaaaatctgtaacaagaaagttaattacctcaacagagccatttgtgaccgtgtaacgagtgta |
42224008 |
T |
|
| Q |
101 |
atcatttccagcgacagagacaagagcaactgaattattgatgtctgaggctgtgtacactttgtcttttatgacttgttggaaaaaattgatctgggtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42224009 |
atcatttccagcgacagagacaagagcaactgaattattgatgtctgaggctgtgtacactttgtcttttatgacttgttggaaaaaattgatctgggtt |
42224108 |
T |
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| Q |
201 |
gtcatgtttgggcctggattcaacgtatcaaacacaccagtaccaccaaatgcaaagttcattcc |
265 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42224109 |
gtcatgtttgggcctggattcaacgtatcaaacacaccagtaccaccaaatgcaaagttcattcc |
42224173 |
T |
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