View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746_high_88 (Length: 246)
Name: NF5746_high_88
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746_high_88 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-128; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-128
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 48631522 - 48631756
Alignment:
| Q |
1 |
aattaaactaatgccggctagtagaatcagaaactgcactcaaagacctaaacaagaaactattatgtctcctcagaacggggaagaatttttgtttagt |
100 |
Q |
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| T |
48631522 |
aattaaactaatgccggctagtagaatcagaaactgcactcaaagacctaaacaagaaactattatgtctcctcagaacggggaagaatttttgtttagt |
48631621 |
T |
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| Q |
101 |
tgaaagaaataaacaatgtttatgaccttatattatagttagtgtatgacatatatagtgaatgtgggaaacaaacccaacatgtctcaaattcacaaag |
200 |
Q |
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| T |
48631622 |
tgaaagaaataaacaatgtttatgaccttatattatagttagtgtatgacatatatagtgaatgtgggaaacaaacccaacatgtctcaaattcacaaag |
48631721 |
T |
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| Q |
201 |
cccacgcttgtgtgcaggccaagaagaaattgatg |
235 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
48631722 |
cccacgcttgtgtgcaggccaagaagaaatggatg |
48631756 |
T |
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