View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5746_low_112 (Length: 211)

Name: NF5746_low_112
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5746_low_112
NF5746_low_112
[»] chr7 (39 HSPs)
chr7 (1-195)||(11831435-11831629)
chr7 (5-106)||(24339649-24339750)
chr7 (6-128)||(7438714-7438836)
chr7 (1-75)||(9408316-9408390)
chr7 (5-82)||(26033436-26033513)
chr7 (6-105)||(6028633-6028732)
chr7 (18-89)||(27229279-27229350)
chr7 (5-128)||(5409771-5409888)
chr7 (1-61)||(7058429-7058489)
chr7 (5-57)||(25481909-25481961)
chr7 (1-130)||(32093952-32094077)
chr7 (1-41)||(35861967-35862007)
chr7 (6-42)||(38143231-38143267)
chr7 (57-128)||(598256-598327)
chr7 (6-78)||(2334256-2334329)
chr7 (1-47)||(3991327-3991373)
chr7 (5-47)||(11061086-11061128)
chr7 (1-91)||(11665406-11665496)
chr7 (5-106)||(43027426-43027521)
chr7 (8-128)||(9778510-9778624)
chr7 (16-105)||(21560521-21560610)
chr7 (5-42)||(42720905-42720942)
chr7 (1-49)||(4024030-4024078)
chr7 (1-74)||(11272569-11272644)
chr7 (1-105)||(25822658-25822762)
chr7 (1-45)||(7973135-7973181)
chr7 (1-47)||(8234149-8234195)
chr7 (5-127)||(32308127-32308249)
chr7 (4-45)||(5954253-5954294)
chr7 (5-42)||(5956280-5956317)
chr7 (6-66)||(18039006-18039067)
chr7 (4-61)||(27945047-27945104)
chr7 (1-42)||(41020499-41020540)
chr7 (6-42)||(11700811-11700847)
chr7 (3-43)||(13300415-13300455)
chr7 (6-42)||(15902830-15902866)
chr7 (5-61)||(18215182-18215238)
chr7 (6-82)||(26329357-26329433)
chr7 (12-44)||(48438560-48438592)
[»] chr1 (48 HSPs)
chr1 (1-128)||(32461393-32461519)
chr1 (5-130)||(18556383-18556508)
chr1 (6-131)||(47989505-47989630)
chr1 (5-128)||(40917758-40917879)
chr1 (4-128)||(9828050-9828174)
chr1 (1-47)||(22881626-22881672)
chr1 (1-105)||(6427464-6427571)
chr1 (1-61)||(24577182-24577242)
chr1 (6-109)||(6612119-6612222)
chr1 (5-105)||(31694662-31694764)
chr1 (5-47)||(5927350-5927392)
chr1 (5-47)||(22515897-22515939)
chr1 (5-47)||(38078671-38078713)
chr1 (5-61)||(113306-113362)
chr1 (6-42)||(16164330-16164366)
chr1 (1-60)||(6332674-6332732)
chr1 (5-106)||(1486666-1486761)
chr1 (1-47)||(32434726-32434772)
chr1 (1-47)||(40258943-40258989)
chr1 (5-47)||(46348393-46348435)
chr1 (5-47)||(48450597-48450639)
chr1 (1-58)||(2283669-2283726)
chr1 (5-61)||(1704988-1705044)
chr1 (5-61)||(6427357-6427413)
chr1 (7-47)||(18337338-18337378)
chr1 (5-49)||(37055864-37055908)
chr1 (23-67)||(48547975-48548019)
chr1 (6-41)||(15323171-15323206)
chr1 (1-80)||(28273065-28273144)
chr1 (5-128)||(5944288-5944413)
chr1 (4-82)||(12713302-12713380)
chr1 (4-82)||(12717393-12717471)
chr1 (4-42)||(14332657-14332695)
chr1 (5-47)||(14359532-14359573)
chr1 (5-47)||(18190118-18190160)
chr1 (1-39)||(30359391-30359429)
chr1 (5-47)||(31015050-31015092)
chr1 (5-47)||(31672905-31672947)
chr1 (5-47)||(41877480-41877522)
chr1 (5-47)||(42359459-42359501)
chr1 (8-78)||(44482240-44482310)
chr1 (5-42)||(398780-398817)
chr1 (17-74)||(15449215-15449272)
chr1 (5-42)||(23531793-23531830)
chr1 (12-89)||(24462238-24462315)
chr1 (8-77)||(25361896-25361965)
chr1 (6-42)||(17425108-17425144)
chr1 (6-42)||(41017419-41017455)
[»] scaffold0086 (1 HSPs)
scaffold0086 (16-106)||(2946-3036)
[»] chr8 (36 HSPs)
chr8 (5-82)||(2572031-2572108)
chr8 (1-128)||(15816058-15816185)
chr8 (1-133)||(29447034-29447166)
chr8 (5-128)||(22651983-22652106)
chr8 (5-106)||(8343323-8343424)
chr8 (5-82)||(21465419-21465496)
chr8 (5-105)||(22197694-22197794)
chr8 (6-47)||(4298896-4298937)
chr8 (5-128)||(29510233-29510356)
chr8 (5-47)||(8342979-8343021)
chr8 (6-47)||(20873077-20873118)
chr8 (57-109)||(3951495-3951547)
chr8 (3-47)||(4948657-4948701)
chr8 (6-109)||(4673373-4673476)
chr8 (5-60)||(25566848-25566903)
chr8 (50-129)||(34450960-34451039)
chr8 (1-47)||(36450764-36450810)
chr8 (5-78)||(28745505-28745578)
chr8 (5-57)||(30077387-30077439)
chr8 (21-92)||(29447467-29447538)
chr8 (6-108)||(4122198-4122300)
chr8 (5-67)||(13436954-13437016)
chr8 (5-42)||(14731719-14731756)
chr8 (5-42)||(20785480-20785517)
chr8 (1-105)||(29655930-29656035)
chr8 (5-42)||(31236592-31236629)
chr8 (5-42)||(39954294-39954331)
chr8 (6-47)||(41831950-41831991)
chr8 (16-49)||(45208442-45208475)
chr8 (1-61)||(17468504-17468564)
chr8 (1-45)||(18170494-18170538)
chr8 (1-45)||(18634062-18634106)
chr8 (5-57)||(22596001-22596053)
chr8 (4-130)||(27067229-27067351)
chr8 (5-33)||(27101522-27101550)
chr8 (7-47)||(40332200-40332240)
[»] chr4 (39 HSPs)
chr4 (1-128)||(24613630-24613757)
chr4 (1-128)||(19482671-19482798)
chr4 (5-108)||(30982827-30982930)
chr4 (5-80)||(51701265-51701340)
chr4 (1-105)||(27706129-27706233)
chr4 (1-78)||(4383371-4383447)
chr4 (6-47)||(6485621-6485662)
chr4 (5-82)||(30838217-30838294)
chr4 (5-61)||(11596348-11596404)
chr4 (5-61)||(12895112-12895168)
chr4 (5-44)||(14465088-14465127)
chr4 (6-136)||(903930-904060)
chr4 (4-42)||(7214537-7214575)
chr4 (5-47)||(28964258-28964300)
chr4 (5-47)||(29205451-29205493)
chr4 (5-47)||(37203271-37203313)
chr4 (1-47)||(54580033-54580079)
chr4 (2-47)||(35157995-35158040)
chr4 (5-61)||(3947762-3947818)
chr4 (16-128)||(22234819-22234931)
chr4 (6-42)||(44081592-44081628)
chr4 (18-129)||(5414100-5414211)
chr4 (5-40)||(33950143-33950178)
chr4 (5-47)||(2361985-2362027)
chr4 (1-47)||(4157153-4157198)
chr4 (1-47)||(12895284-12895330)
chr4 (5-47)||(21945510-21945552)
chr4 (5-47)||(23292996-23293038)
chr4 (5-47)||(31800488-31800530)
chr4 (1-47)||(40481640-40481685)
chr4 (16-109)||(19500806-19500899)
chr4 (16-61)||(28084540-28084585)
chr4 (5-42)||(28158015-28158052)
chr4 (5-106)||(47263993-47264094)
chr4 (5-109)||(847958-848062)
chr4 (5-44)||(888207-888247)
chr4 (3-47)||(12797348-12797391)
chr4 (6-42)||(18491894-18491930)
chr4 (5-61)||(35952613-35952669)
[»] chr3 (48 HSPs)
chr3 (1-128)||(14209116-14209243)
chr3 (5-106)||(4987242-4987343)
chr3 (5-104)||(14832106-14832205)
chr3 (1-128)||(41961579-41961706)
chr3 (1-127)||(14216895-14217021)
chr3 (1-127)||(14223024-14223150)
chr3 (6-128)||(15796223-15796345)
chr3 (1-47)||(55401078-55401124)
chr3 (5-130)||(34185050-34185175)
chr3 (5-73)||(1509546-1509614)
chr3 (5-106)||(11313746-11313852)
chr3 (1-75)||(28812518-28812592)
chr3 (1-82)||(750593-750674)
chr3 (6-47)||(10268496-10268537)
chr3 (5-73)||(14747568-14747637)
chr3 (1-46)||(34910320-34910365)
chr3 (5-109)||(11665951-11666055)
chr3 (5-92)||(25064916-25065001)
chr3 (5-61)||(25948883-25948939)
chr3 (5-61)||(49651782-49651838)
chr3 (6-61)||(39756244-39756299)
chr3 (1-47)||(10954955-10955001)
chr3 (5-47)||(26508117-26508159)
chr3 (5-47)||(28918008-28918050)
chr3 (6-47)||(17568693-17568734)
chr3 (6-111)||(55212971-55213075)
chr3 (6-78)||(16192729-16192801)
chr3 (5-128)||(27505253-27505370)
chr3 (9-60)||(15314873-15314924)
chr3 (9-47)||(8587031-8587069)
chr3 (1-47)||(10335296-10335342)
chr3 (4-90)||(17005586-17005672)
chr3 (1-47)||(20503468-20503514)
chr3 (5-47)||(21256996-21257038)
chr3 (5-47)||(51206363-51206405)
chr3 (6-39)||(5339116-5339149)
chr3 (5-42)||(7928457-7928494)
chr3 (5-42)||(9624648-9624685)
chr3 (5-105)||(14829697-14829797)
chr3 (5-42)||(27277853-27277890)
chr3 (5-42)||(49505169-49505206)
chr3 (5-61)||(3164021-3164077)
chr3 (6-42)||(4201404-4201440)
chr3 (5-41)||(14979188-14979224)
chr3 (5-49)||(26492213-26492257)
chr3 (6-42)||(32804555-32804591)
chr3 (10-42)||(39002044-39002076)
chr3 (6-42)||(48202284-48202320)
[»] chr6 (53 HSPs)
chr6 (5-106)||(16766704-16766805)
chr6 (1-127)||(31384923-31385048)
chr6 (6-88)||(4118302-4118384)
chr6 (1-106)||(8365470-8365575)
chr6 (1-108)||(17302559-17302667)
chr6 (6-78)||(5970087-5970159)
chr6 (1-61)||(10770670-10770730)
chr6 (5-108)||(9522898-9523001)
chr6 (5-47)||(17841599-17841641)
chr6 (1-133)||(34595137-34595258)
chr6 (6-47)||(426524-426565)
chr6 (5-106)||(9107321-9107422)
chr6 (1-57)||(8776973-8777029)
chr6 (5-89)||(17435206-17435290)
chr6 (130-189)||(33722445-33722504)
chr6 (1-47)||(853869-853915)
chr6 (1-47)||(1681761-1681807)
chr6 (1-47)||(7801166-7801212)
chr6 (1-67)||(10827551-10827617)
chr6 (1-47)||(15489742-15489788)
chr6 (1-47)||(16833311-16833357)
chr6 (6-47)||(403874-403915)
chr6 (6-78)||(8713987-8714060)
chr6 (5-109)||(12696331-12696429)
chr6 (52-129)||(16488518-16488595)
chr6 (5-128)||(28715302-28715414)
chr6 (5-42)||(33001304-33001341)
chr6 (5-61)||(2117083-2117138)
chr6 (1-61)||(7930308-7930368)
chr6 (52-128)||(18367890-18367966)
chr6 (147-183)||(21241919-21241955)
chr6 (5-73)||(21395292-21395359)
chr6 (5-40)||(10842539-10842574)
chr6 (5-59)||(7151419-7151473)
chr6 (5-47)||(7938123-7938165)
chr6 (5-47)||(7977840-7977882)
chr6 (58-104)||(9658928-9658974)
chr6 (5-47)||(31959166-31959208)
chr6 (5-42)||(7086802-7086839)
chr6 (5-42)||(8805587-8805624)
chr6 (5-82)||(9195729-9195806)
chr6 (1-42)||(24115862-24115903)
chr6 (6-99)||(25038029-25038122)
chr6 (57-106)||(29020960-29021009)
chr6 (5-42)||(30866159-30866196)
chr6 (1-42)||(34225824-34225865)
chr6 (6-42)||(9617442-9617478)
chr6 (5-61)||(10888970-10889026)
chr6 (6-66)||(18252742-18252802)
chr6 (143-183)||(21286749-21286789)
chr6 (4-44)||(25096429-25096469)
chr6 (57-129)||(28152146-28152218)
chr6 (138-178)||(33709853-33709893)
[»] scaffold0003 (1 HSPs)
scaffold0003 (5-128)||(241601-241724)
[»] chr2 (27 HSPs)
chr2 (5-128)||(30717459-30717582)
chr2 (7-128)||(37419752-37419873)
chr2 (1-128)||(26769514-26769641)
chr2 (5-105)||(11223816-11223915)
chr2 (2-126)||(15657868-15657992)
chr2 (1-45)||(30335420-30335464)
chr2 (1-47)||(18841023-18841069)
chr2 (5-47)||(20539684-20539726)
chr2 (5-47)||(37558984-37559026)
chr2 (6-47)||(18255990-18256031)
chr2 (6-47)||(30404860-30404901)
chr2 (1-106)||(36756295-36756400)
chr2 (1-45)||(12940947-12940991)
chr2 (5-61)||(33153431-33153487)
chr2 (1-60)||(974750-974809)
chr2 (1-47)||(19536407-19536454)
chr2 (5-47)||(2438729-2438771)
chr2 (5-75)||(4882678-4882748)
chr2 (3-61)||(12668419-12668477)
chr2 (5-47)||(21374709-21374751)
chr2 (8-42)||(36409642-36409676)
chr2 (5-47)||(5040739-5040783)
chr2 (5-42)||(28677916-28677953)
chr2 (5-33)||(3415014-3415042)
chr2 (1-89)||(34784950-34785038)
chr2 (5-57)||(38117159-38117211)
chr2 (6-42)||(40361769-40361805)
[»] chr5 (33 HSPs)
chr5 (1-109)||(21542033-21542141)
chr5 (5-129)||(39698548-39698672)
chr5 (5-106)||(19579708-19579809)
chr5 (5-108)||(21522757-21522860)
chr5 (5-108)||(21533323-21533426)
chr5 (5-106)||(7677712-7677813)
chr5 (5-47)||(14674276-14674318)
chr5 (1-47)||(15405065-15405111)
chr5 (5-47)||(31084330-31084372)
chr5 (1-47)||(33178028-33178074)
chr5 (1-61)||(5894829-5894889)
chr5 (1-45)||(12159955-12159999)
chr5 (6-89)||(12641682-12641765)
chr5 (1-104)||(30183552-30183655)
chr5 (1-76)||(40131624-40131699)
chr5 (5-47)||(6247629-6247671)
chr5 (5-47)||(8420034-8420076)
chr5 (1-47)||(10298572-10298618)
chr5 (5-47)||(21191066-21191108)
chr5 (5-47)||(21576755-21576797)
chr5 (52-129)||(21814315-21814392)
chr5 (6-131)||(30098334-30098459)
chr5 (1-42)||(41995474-41995515)
chr5 (1-73)||(21351889-21351961)
chr5 (6-61)||(13287395-13287450)
chr5 (6-40)||(16881144-16881178)
chr5 (4-42)||(35017043-35017081)
chr5 (5-47)||(42893367-42893409)
chr5 (5-47)||(43001807-43001849)
chr5 (5-42)||(23012423-23012460)
chr5 (6-47)||(24906311-24906352)
chr5 (5-82)||(32766918-32766995)
chr5 (6-42)||(38749578-38749614)
[»] scaffold0719 (1 HSPs)
scaffold0719 (129-195)||(5714-5779)
[»] scaffold0272 (1 HSPs)
scaffold0272 (129-195)||(19787-19852)
[»] scaffold0016 (1 HSPs)
scaffold0016 (129-195)||(39885-39950)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-47)||(17759-17805)
[»] scaffold0008 (1 HSPs)
scaffold0008 (5-83)||(263346-263424)
[»] scaffold0361 (1 HSPs)
scaffold0361 (1-47)||(14533-14579)
[»] scaffold0136 (1 HSPs)
scaffold0136 (6-128)||(3778-3900)
[»] scaffold0223 (2 HSPs)
scaffold0223 (5-61)||(20179-20235)
scaffold0223 (8-41)||(19465-19498)
[»] scaffold0044 (1 HSPs)
scaffold0044 (7-111)||(53189-53293)
[»] scaffold0227 (1 HSPs)
scaffold0227 (1-47)||(7321-7367)
[»] scaffold0103 (1 HSPs)
scaffold0103 (5-47)||(51818-51860)
[»] scaffold0036 (1 HSPs)
scaffold0036 (4-88)||(9716-9800)
[»] scaffold0019 (1 HSPs)
scaffold0019 (5-106)||(71730-71833)
[»] scaffold0450 (1 HSPs)
scaffold0450 (1-104)||(8588-8691)
[»] scaffold0027 (1 HSPs)
scaffold0027 (6-45)||(46690-46729)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-47)||(178828-178875)
[»] scaffold0722 (1 HSPs)
scaffold0722 (5-47)||(7042-7084)
[»] scaffold0652 (1 HSPs)
scaffold0652 (5-47)||(472-514)
[»] scaffold0246 (1 HSPs)
scaffold0246 (1-47)||(19579-19624)
[»] scaffold0053 (1 HSPs)
scaffold0053 (5-47)||(8805-8847)
[»] scaffold0306 (1 HSPs)
scaffold0306 (1-46)||(13403-13448)
[»] scaffold0152 (1 HSPs)
scaffold0152 (1-46)||(21879-21924)
[»] scaffold0021 (1 HSPs)
scaffold0021 (6-47)||(130490-130531)
[»] scaffold0066 (1 HSPs)
scaffold0066 (5-45)||(33375-33415)


Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 195
Target Start/End: Original strand, 11831435 - 11831629
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| || ||||| ||||||||| ||||||||||||||||||||||    
T  11831435 acaactaataatttgaaaaaatcatataatttagtgtaattacaagtattcgtgtcgtatcggtgtcggacacgacatgtgtttgacaccggagcacgcc 11831534  T
Q  101 taatccaagaactgttcatgcttcatagtttgaaatcaaacaattttatatgttttgttcttcatcctgctcatgtttctagctttattctttat 195  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||| |||||||||||||||||||||||||||    
T  11831535 taatccaagaactgttcatgcttcatagtttgaaatcaaacaactttatatgttttgctcttcctccggctcatgtttctagctttattctttat 11831629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 24339649 - 24339750
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  |||||||||| ||||| |||||||||||| |  ||||||||  ||||||||||    
T  24339649 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtatccgacaccgggacacgcctaat 24339748  T
Q  105 cc 106  Q
    ||    
T  24339749 cc 24339750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 7438714 - 7438836
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    |||||||||||||||||||||||||| ||||||||||||||| |  ||||| |||| |||||| ||||||||| |||  |||||  |  ||||||||||     
T  7438714 taataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtcatgtcggtgtcaaacacgacacatgtgcgacactaggacacgcctaatt 7438813  T
Q  106 caagaactgttcatgcttcatag 128  Q
    |||| | ||| | ||||||||||    
T  7438814 caaggagtgtccgtgcttcatag 7438836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 9408390 - 9408316
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacga 75  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||| |  ||||||| || |||||||||||||    
T  9408390 acaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcggtgtcagacacga 9408316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 26033513 - 26033436
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  || ||||||| |||||||||| |||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtctcgtgtcggtgtcagacatgacacgtgt 26033436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 6028633 - 6028732
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    |||||||||||||| || |||||||||||||||||||||| | |  |||||||||| |||||  |||||||||| ||| ||||| |   |||||||||||    
T  6028633 taataatttgaaaatataacataatttaatgtaattacaaatgtcggtgtcgtgtcagtgtcgaacacgacacgagttcgacactgagacacgcctaatc 6028732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 27229350 - 27229279
Alignment:
Q  18 aaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacac 89  Q
    |||||||||||||||| |||||||| ||||||  ||||||||||  |||||||||||| ||||||| |||||    
T  27229350 aaaatcacataatttagtgtaattataagtatcggtgtcgtgtcactgtcagacacgatacgtgttcgacac 27229279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 5409888 - 5409771
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | || |||||||||| |  |||||      ||||| ||||||||||||||  ||||||||  ||||||||||    
T  5409888 ctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtc------gtgtcggacacgacacgtgtccgacaccgggacacgcctaat 5409795  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || || | ||| | ||||||||||    
T  5409794 ccgaggagtgtccgtgcttcatag 5409771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7058429 - 7058489
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||  ||||| | ||||||||||||| || ||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgttggtgtcgtgtc 7058489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25481909 - 25481961
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcg 57  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || ||||||    
T  25481909 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgtcg 25481961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 32094077 - 32093952
Alignment:
Q  1 acaactaataatttgaaaaaa-tcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggag-cacg 98  Q
    ||||||||||||||||||||| |||||||||| | ||||||||||| | |  |||||      ||||| ||||||||||||||  |||||||| | ||||    
T  32094077 acaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtc------gtgtcggacacgacacgtgtccgacaccggggacacg 32093984  T
Q  99 cctaatccaagaactgttcatgcttcatagtt 130  Q
    |||||||| || | ||||| ||||||||||||    
T  32093983 cctaatccgaggagtgttcgtgcttcatagtt 32093952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35861967 - 35862007
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaatt 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  35861967 acaactaataatttgaaaaaatcacataattcaatgtaatt 35862007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 38143231 - 38143267
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  38143231 taataatttgaaaaaatcacataatttaatgtaatta 38143267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 57 - 128
Target Start/End: Original strand, 598256 - 598327
Alignment:
Q  57 gtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatag 128  Q
    ||||| ||||||||||||||||||||  ||||||||  |||||||||||| |||| ||| | ||||||||||    
T  598256 gtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaatccgagaagtgtccgtgcttcatag 598327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 2334256 - 2334329
Alignment:
Q  6 taataatttgaaaa--aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    ||||||||||||||  |||||||||||||| ||||||||||||| |  |||||||||| ||||| ||||||||||    
T  2334256 taataatttgaaaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtc-gtgtcggacacgacac 2334329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 3991327 - 3991373
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| | | |||||||||||    
T  3991327 acaactaataatttgaaaaaatcacataattcagtataattacaagt 3991373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 11061128 - 11061086
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| | |||||||||||    
T  11061128 ctaataatttgaaaaaatcacataatttagtataattacaagt 11061086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 11665496 - 11665406
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccg 91  Q
    ||||||||||||||||||||||||||||||| | | |||||| |||| |   |||| |||| |||||  |||||||||||||  |||||||    
T  11665496 acaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtcatgtcggtgtcgaacacgacacgtgtccgacaccg 11665406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 43027521 - 43027426
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||  | ||||| ||||||| |  |||||      ||||||||||||||||||||  ||||||||  ||||||||||    
T  43027521 ctaataatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtc------gtgtcagacacgacacgtgtccgacaccgggacacgcctaat 43027428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 9778510 - 9778624
Alignment:
Q  8 ataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatcca 107  Q
    |||||||||||||||||||||||| | | ||||||||||| |  |||||      ||||| ||||| ||||||||  ||||||||  |||||||||||||    
T  9778510 ataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc------gtgtcggacacaacacgtgtccgacaccgggacacgcctaatcca 9778603  T
Q  108 agaactgttcatgcttcatag 128  Q
    || | ||| | ||||||||||    
T  9778604 aggagtgtccgtgcttcatag 9778624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 105
Target Start/End: Original strand, 21560521 - 21560610
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    |||||||||||||||| | ||||||||||||| |  ||||||| || |||||| |||||| || ||| | |||||| | |||||||||||    
T  21560521 aaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcggtgtcaaacacgatacatgtctaacaccgaaacacgcctaatc 21560610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 42720942 - 42720905
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  42720942 ctaataatttgaaaaaatcacataattaaatgtaatta 42720905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 4024030 - 4024078
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtat 49  Q
    |||||||||||||| ||||||| |||||||||||| |||||| ||||||    
T  4024030 acaactaataatttaaaaaaatgacataatttaatataattataagtat 4024078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 11272644 - 11272569
Alignment:
Q  1 acaactaataatttgaaaaaatcac--ataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacg 74  Q
    |||||| ||||||||||||||||||  |||||| | ||||||||||||| |  |||||||||| ||||| ||||||    
T  11272644 acaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacg 11272569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 25822658 - 25822762
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||||||||||   || |||| | ||||||||||||| |  ||||||| || || || |||||||||||||| ||||| |||  || |||    
T  25822658 acaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcggtatcggacacgacacgtgtctgacatcgggacatgcc 25822757  T
Q  101 taatc 105  Q
    |||||    
T  25822758 taatc 25822762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7973181 - 7973135
Alignment:
Q  1 acaactaataatttgaaaaaa--tcacataatttaatgtaattacaa 45  Q
    |||| ||||||||||||||||  ||||||||||||||||||||||||    
T  7973181 acaattaataatttgaaaaaaaatcacataatttaatgtaattacaa 7973135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8234149 - 8234195
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||| |||||||| | |||| ||||||||    
T  8234149 acaactaataatttgaaaaaataacataattcagtgtagttacaagt 8234195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 32308127 - 32308249
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||| |||||||||||||| | |||||||  | || |  |||||||||| ||||  |||||||||| |||  |||||||   |||  |||||    
T  32308127 ctaataatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccgagacacagctaat 32308226  T
Q  105 ccaagaactgttcatgcttcata 127  Q
    || || | |||||||||||||||    
T  32308227 ccgaggagtgttcatgcttcata 32308249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 45
Target Start/End: Original strand, 5954253 - 5954294
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    ||||||||||||||||||| ||||||| || |||||||||||    
T  5954253 actaataatttgaaaaaattacataatctagtgtaattacaa 5954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 5956280 - 5956317
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||| ||||||||| |||||||||||||||||    
T  5956280 ctaataatttaaaaaaatcaaataatttaatgtaatta 5956317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 66
Target Start/End: Original strand, 18039006 - 18039067
Alignment:
Q  6 taataatttgaaaa-aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgt 66  Q
    |||||||||||||| |||||||||||| | ||||||||||||| |  |||||||||| ||||    
T  18039006 taataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgt 18039067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 27945047 - 27945104
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||| ||||| |||||||| | ||||||||||||| |  ||||||||||    
T  27945047 actaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41020499 - 41020540
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||  ||||||||||||||||| ||||||||    
T  41020499 acaactaataatttacaaaaatcacataatttagtgtaatta 41020540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 11700811 - 11700847
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  11700811 taataatttgacaaaatcacataattcaatgtaatta 11700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 43
Target Start/End: Original strand, 13300415 - 13300455
Alignment:
Q  3 aactaataatttgaaaaaatcacataatttaatgtaattac 43  Q
    |||||||||||||||||||||| |||||| | |||||||||    
T  13300415 aactaataatttgaaaaaatcatataattcagtgtaattac 13300455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 15902830 - 15902866
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  15902830 taataatttgataaaatcacataatttagtgtaatta 15902866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 18215238 - 18215182
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||  | |||| |||||||| |  ||||||||||    
T  18215238 ctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtcgtgtc 18215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 26329433 - 26329357
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||| |||| |||| |||| | |||||||| | || |  | |||||||| ||||||||||||||||||||    
T  26329433 taataatttgagaaaaacacacaattcagtgtaattatatgtgtcggcgtcgtgtcggtgtcagacacgacacgtgt 26329357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 48438560 - 48438592
Alignment:
Q  12 tttgaaaaaatcacataatttaatgtaattaca 44  Q
    |||||||||||||||||||| ||||||||||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattaca 48438592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 76; Significance: 3e-35; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 32461519 - 32461393
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| ||||| |||||||||||||| |||||| ||  ||||||    
T  32461519 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtgttggtgt-gtgtcggtgtcggacacgacacgtgtctgacactgggacacgcc 32461421  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    ||||||||||| ||| | ||||||||||    
T  32461420 taatccaagaagtgtccgtgcttcatag 32461393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 18556508 - 18556383
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| | ||||||||| |||||||| |  ||||| ||  ||||||||||    
T  18556508 ctaataatttgaaaatatcacataatttaatgtaattacaagtattggtgtcgtgacggtgtcagacccgacacgtatccgacactgggacacgcctaat 18556409  T
Q  105 ccaagaactgttcatgcttcatagtt 130  Q
    || |||| ||| | ||||||||||||    
T  18556408 ccgagaagtgtccgtgcttcatagtt 18556383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 47989505 - 47989630
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||| |||||||||||||||| | ||||||||||||| |  |||||||||| ||||| |||||||||| ||| ||||| |||  |||||||||||    
T  47989505 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacatgtctgacatcgggacacgcctaatc 47989604  T
Q  106 caagaactgttcatgcttcatagttt 131  Q
    | || | ||| | |||||||||||||    
T  47989605 cgaggagtgtccgtgcttcatagttt 47989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 40917758 - 40917879
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||  ||| | ||||||||||||| |  |||||||||| ||||  ||||||||||||||  ||||||||  ||||||||||    
T  40917758 ctaataatttgaaaaaatcaca--attaagtgtaattacaagtctcggtgtcgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaat 40917855  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || || ||||| | ||||||||||    
T  40917856 ccgaggactgtccgtgcttcatag 40917879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 9828050 - 9828174
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaa 103  Q
    ||||||||||||| |||||||||||||| | |||||||  | || |  |||||||||| ||||||||||||||||||||  ||||||||  |||| ||||    
T  9828050 actaataatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtccgtgtcagacacgacacgtgtccgacaccgggacacgtctaa 9828149  T
Q  104 tccaagaactgttcatgcttcatag 128  Q
    ||| || | ||| | ||||||||||    
T  9828150 tccgaggagtgtccgtgcttcatag 9828174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22881672 - 22881626
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  22881672 acaactaataatttgaaaaaatcacataatttagtgtaattacaagt 22881626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 6427464 - 6427571
Alignment:
Q  1 acaactaataatttgaaaa---aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcac 97  Q
    |||||||||||||||||||   |||||||||||| ||||||| ||||||| |  |||||||||  | ||| ||||||||||||||  ||||||||  |||    
T  6427464 acaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtcagtgtcgtgtaggcgtcggacacgacacgtgtccgacaccgggacac 6427563  T
Q  98 gcctaatc 105  Q
    ||||||||    
T  6427564 gcctaatc 6427571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24577242 - 24577182
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  24577242 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 24577182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 6612222 - 6612119
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||||||||||| |||||||| | ||||||||||||| |  ||||||||||  |||| ||||||| | ||||  |||||| |  |||||||||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcgatgtcggacacgatatgtgtccgacaccaggacacgcctaatc 6612123  T
Q  106 caag 109  Q
    ||||    
T  6612122 caag 6612119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 31694764 - 31694662
Alignment:
Q  5 ctaataatttgaaaaaa--tcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgccta 102  Q
    |||||||||||||||||  |||||||||| | | ||||||||||| |  |||||||||| ||||| ||||| |||| | || ||||||||| ||||||||    
T  31694764 ctaataatttgaaaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggtgtcggacacaacacatattcgacaccggaacacgccta 31694665  T
Q  103 atc 105  Q
    |||    
T  31694664 atc 31694662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 5927392 - 5927350
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| ||||||||||||||||||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagt 5927350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 22515939 - 22515897
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  22515939 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 22515897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 38078713 - 38078671
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  38078713 ctaataatttgaaaaaatcacataattcaatgtaattacaagt 38078671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 113306 - 113362
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  113306 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 113362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 16164366 - 16164330
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||||||||||||||||||||||    
T  16164366 taataatttgaaaaaatcacataatttaatgtaatta 16164330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6332674 - 6332732
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgt 60  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||||  |||||||||    
T  6332674 acaactaataatttgaaaa-atcacataattcagtgtaattacaagtatcggtgtcgtgt 6332732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 1486761 - 1486666
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | |||||||| |||| |  |||||      ||||| ||||||||||||||  ||||||||  ||||||||||    
T  1486761 ctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc------gtgtcggacacgacacgtgtccgacaccgggacacgcctaat 1486668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32434772 - 32434726
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||    
T  32434772 acaactaataatttgaaaaagtcacataattcattgtaattacaagt 32434726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40258989 - 40258943
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||| |||||||||||||||||||||||||| | |||||||||||||    
T  40258989 acaattaataatttgaaaaaatcacataattcagtgtaattacaagt 40258943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 46348435 - 46348393
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  46348435 ctaataatttgaaaaaatcatataatttagtgtaattacaagt 46348393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 48450639 - 48450597
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  48450639 ctaataatttgaaaaaataacataatttagtgtaattacaagt 48450597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2283669 - 2283726
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgt 58  Q
    |||||| |||||||||||||||||||| ||| |||||||||| |||| || |||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgttggtgtcgt 2283726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 1705044 - 1704988
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| |  |||||||||||| |  ||||||||||    
T  1705044 ctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtcgtgtc 1704988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 6427357 - 6427413
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||| |||||||||||||| |||||||||| | || || ||||||||||    
T  6427357 ctaataatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 18337338 - 18337378
Alignment:
Q  7 aataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagt 18337378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 37055908 - 37055864
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtat 49  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||    
T  37055908 ctaataatttgagaaaattacataatttagtgtaattacaagtat 37055864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 48548019 - 48547975
Alignment:
Q  23 cacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtc 67  Q
    ||||||||| |||||||||||||||||| |||||||||| |||||    
T  48548019 cacataattcaatgtaattacaagtattggtgtcgtgtcggtgtc 48547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 41
Target Start/End: Original strand, 15323171 - 15323206
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatt 41  Q
    |||||||||||||||||||||||||||| |||||||    
T  15323171 taataatttgaaaaaatcacataatttagtgtaatt 15323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 28273144 - 28273065
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgt 80  Q
    ||||||||| |||||||||||||| |||||| | ||||||||||||| |  ||||| | ||  |||| ||||||||||||    
T  28273144 acaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcgatgtcggacacgacacgt 28273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 5944288 - 5944413
Alignment:
Q  5 ctaataatttgaaaa--aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgccta 102  Q
    |||||||||||||||  |||||||||||| | |||||||| |||| |  ||||||||||  || | ||||| |||| |||  ||||||||   |||||||    
T  5944288 ctaataatttgaaaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcgatgacggacacaacacatgtccgacaccgggatacgccta 5944387  T
Q  103 atccaagaactgttcatgcttcatag 128  Q
    |||| || | ||||| ||||||||||    
T  5944388 atccgaggagtgttcgtgcttcatag 5944413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 12713380 - 12713302
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||| | |||||||||||||||| |||||||| | ||||| ||||  |||| |||||  |||| ||||||||    
T  12713380 actaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12713302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 82
Target Start/End: Complemental strand, 12717471 - 12717393
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||| | |||||||||||||||| |||||||| | ||||| ||||  |||| |||||  |||| ||||||||    
T  12717471 actaataatttaagaaaatcacataatttagtgtaattatatgtattggtgttatgtcggtgtcgtacacaacacgtgt 12717393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 14332695 - 14332657
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  14332695 actaataatttgagaaaatcacataatttagtgtaatta 14332657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 14359573 - 14359532
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||| |||||||||||| |||||||||||||    
T  14359573 ctaataatttgaaaaa-tcacataatttagtgtaattacaagt 14359532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 18190160 - 18190118
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  18190160 ctaataatttgaaaaaattacataattcagtgtaattacaagt 18190118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 30359391 - 30359429
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaa 39  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  30359391 acaactgataatttgaaaaaatcacataatttagtgtaa 30359429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 31015050 - 31015092
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||| |||||||||||||| | |||||||||||||    
T  31015050 ctaataatttgagaaaatcacataattcagtgtaattacaagt 31015092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 31672947 - 31672905
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||| ||||| | |||||||||||||    
T  31672947 ctaataatttgaaaaaatcacttaattcagtgtaattacaagt 31672905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 41877522 - 41877480
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||| ||||| |||||||||| |||||||||||||    
T  41877522 ctaataatttgagaaaattacataatttagtgtaattacaagt 41877480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 42359501 - 42359459
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||| |||| | |||||||||||||    
T  42359501 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagt 42359459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 44482240 - 44482310
Alignment:
Q  8 ataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    ||||||||| |||||||||||||| | |||||||| | || |  |||||||||| ||||| ||||||||||    
T  44482240 ataatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacacgacac 44482310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 398817 - 398780
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  398817 ctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 17 - 74
Target Start/End: Complemental strand, 15449272 - 15449215
Alignment:
Q  17 aaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacg 74  Q
    ||||||||||||||||| ||||||||||||| |  ||||||| || ||||| ||||||    
T  15449272 aaaaatcacataatttagtgtaattacaagtgtctgtgtcgtatcggtgtcggacacg 15449215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 23531830 - 23531793
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  23531830 ctaataatttgaaaatatcacataattcaatgtaatta 23531793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 24462315 - 24462238
Alignment:
Q  12 tttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacac 89  Q
    ||||||||||| |||||||| |||||||| |||||| |  |||||||||  |||||  ||| |||||||||| |||||    
T  24462315 tttgaaaaaatgacataattcaatgtaatcacaagtttcagtgtcgtgttggtgtctaacatgacacgtgttggacac 24462238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 77
Target Start/End: Original strand, 25361896 - 25361965
Alignment:
Q  8 ataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgaca 77  Q
    ||||||||| |||||||||||||| | |||||||| | || |  |||||||||| ||||| |||||||||    
T  25361896 ataatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcggtgtcggacacgaca 25361965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 17425144 - 17425108
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  17425144 taataatttgataaaatcacataattcaatgtaatta 17425108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 41017455 - 41017419
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| ||||| |||||||||||||||||||    
T  41017455 taataatttgagaaaatgacataatttaatgtaatta 41017419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 2946 - 3036
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatcc 106  Q
    |||||||||||||||||| |||||||||||||||  |||||||||| || |||||||||||||||||| ||||||||| ||||||||||||    
T  2946 aaaaaatcacataatttagtgtaattacaagtatcagtgtcgtgtcggtatcagacacgacacgtgttcgacaccggaacacgcctaatcc 3036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 1e-24; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 2572108 - 2572031
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |  |||||||||||||||| ||||||||||||||    
T  2572108 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtgtctgtgtcggacacgacacgtgt 2572031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 15816185 - 15816058
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||| |  |||||||||  ||||| |||||||||||  |  ||||||||  ||||||    
T  15816185 acaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtcgtgttggtgtcggacacgacacgaatccgacaccgggacacgcc 15816086  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    |||||| |||| ||| | ||||||||||    
T  15816085 taatccgagaagtgtccgtgcttcatag 15816058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 29447166 - 29447034
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||| |  ||||| |||| ||||| ||||||||| |||| ||||||| |  ||||||    
T  29447166 acaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtcatgtcggtgtcggacacgacatgtgtctgacaccaggacacgcc 29447067  T
Q  101 taatccaagaactgttcatgcttcatagtttga 133  Q
    |||||| || | ||| | ||||||||| |||||    
T  29447066 taatcctaggagtgtccgtgcttcataatttga 29447034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 22651983 - 22652106
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| ||| ||||||||||| |  |||||||||| ||||| ||||||||| ||||  ||||||||  |||| |||||    
T  22651983 ctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtcgtgtcggtgtcggacacgacatgtgtccgacaccgggacacgtctaat 22652082  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || || | ||| | ||||||||||    
T  22652083 ccgaggagtgtccgtgcttcatag 22652106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 8343323 - 8343424
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |  |||||||    ||||| ||||||||||||||  ||||||||  ||||||||||    
T  8343323 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcagtgtcgtacacgtgtccgacacgacacgtgtccgacaccgggacacgcctaat 8343422  T
Q  105 cc 106  Q
    ||    
T  8343423 cc 8343424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 21465419 - 21465496
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    |||||||||||||||||||| ||||||  |||||||||||||| || |||||||||| ||||| ||||||||||||||    
T  21465419 ctaataatttgaaaaaatcatataattcgatgtaattacaagtgttggtgtcgtgtcagtgtcggacacgacacgtgt 21465496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 22197794 - 22197694
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtc-gtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaa 103  Q
    |||||||||||||||| |||||||||||| ||||||||||||| |  ||||| ||||| ||||| |||| |||||||||  ||||||||| |||||||||    
T  22197794 ctaataatttgaaaaattcacataatttagtgtaattacaagtgtcagtgtcagtgtc-gtgtcggacatgacacgtgtccgacaccggatcacgcctaa 22197696  T
Q  104 tc 105  Q
    ||    
T  22197695 tc 22197694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 4298937 - 4298896
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  4298937 taataatttgaaaaaatcacataatttaatgtaattacaagt 4298896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 29510356 - 29510233
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||||||||||||| |||| | | ||||||||||| |  |||| ||||| ||||| |||||||| |||||  ||||||||  ||| ||||||    
T  29510356 ctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcggtgtagtgtcggtgtcggacacgacgcgtgtccgacaccgggacacacctaat 29510257  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || || | ||| | ||||||||||    
T  29510256 ccgaggagtgtccgtgcttcatag 29510233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 8342979 - 8343021
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  8342979 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 8343021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 20873077 - 20873118
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  20873077 taataatttgaaaaaatcacataatttagtgtaattacaagt 20873118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 109
Target Start/End: Complemental strand, 3951547 - 3951495
Alignment:
Q  57 gtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaag 109  Q
    ||||| |||||||||||||||||||| |||||| ||| |||||||||||||||    
T  3951547 gtgtcggtgtcagacacgacacgtgtctgacacgggaacacgcctaatccaag 3951495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 4948657 - 4948701
Alignment:
Q  3 aactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| | |||||||||||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagt 4948701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 109
Target Start/End: Complemental strand, 4673476 - 4673373
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||||||||||||| | |||| | |||||||||||||||  ||||| |||   |||| |||||||| | | |  ||||||||| |||||||||||    
T  4673476 taataatttgaaaaaatcataaaattcagtgtaattacaagtatcagtgtcttgttgatgtcggacacgacgcatatccgacaccggaacacgcctaatc 4673377  T
Q  106 caag 109  Q
    ||||    
T  4673376 caag 4673373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 25566848 - 25566903
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgt 60  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  |||||||||    
T  25566848 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgt 25566903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 129
Target Start/End: Complemental strand, 34451039 - 34450960
Alignment:
Q  50 tcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatagt 129  Q
    |||||||||||| ||||| |||||||||||||| |||||| ||  ||||||| ||||||| | ||| | |||||||||||    
T  34451039 tcgtgtcgtgtcggtgtcggacacgacacgtgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatagt 34450960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 36450810 - 36450764
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||| |||| | |||||||||||||    
T  36450810 acaactaataatttgaaaaaatcacagaattcagtgtaattacaagt 36450764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 28745505 - 28745578
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    |||||||||||||||| |||||||||| ||||||| ||||| | |   ||||||||| ||||| ||||||||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtcgtgtcggtgtcggacacgacac 28745578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30077439 - 30077387
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcg 57  Q
    ||||||||||||||| ||||||||||| | ||||||||||||| | |||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtccgtgtcg 30077387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 29447467 - 29447538
Alignment:
Q  21 atcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccgg 92  Q
    ||||||||||| | |||||||| | || || |||||||||| ||||||||||||||| ||||  ||||||||    
T  29447467 atcacataattaagtgtaattatatgtgttggtgtcgtgtcggtgtcagacacgacatgtgtccgacaccgg 29447538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 108
Target Start/End: Complemental strand, 4122300 - 4122198
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    |||||||| || ||||| | |||||| | |||||||| | || |  |||| |||||  ||||| |||||||||||||| ||||||||| |||| ||||||    
T  4122300 taataattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtcaatgtcaaacacgacacgtgttggacaccggaacacgtctaatc 4122201  T
Q  106 caa 108  Q
    |||    
T  4122200 caa 4122198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 67
Target Start/End: Complemental strand, 13437016 - 13436954
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtc 67  Q
    ||||||||||||||||||||||||||| |  ||||| |||||| |  |||||||||| |||||    
T  13437016 ctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtcgtgtcggtgtc 13436954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 14731719 - 14731756
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  14731719 ctaataatttgagaaaatcacataatttagtgtaatta 14731756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 20785517 - 20785480
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  20785517 ctaataatttgaggaaatcacataatttaatgtaatta 20785480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 29656035 - 29655930
Alignment:
Q  1 acaactaataatttgaaaaaatcacataa-tttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgc 99  Q
    |||||||||||||| ||||||   ||||| |||||| ||||||||||| |  | |||||||| ||||| ||||| |||| | | |||||||| | |||||    
T  29656035 acaactaataatttaaaaaaaaatcataaatttaatataattacaagtgtaggcgtcgtgtcagtgtcggacacaacacatatctgacaccgaaacacgc 29655936  T
Q  100 ctaatc 105  Q
    ||||||    
T  29655935 ctaatc 29655930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 31236629 - 31236592
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  31236629 ctaataatttgagaaaatcacataattcaatgtaatta 31236592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 39954331 - 39954294
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  39954331 ctaataatttgagaaaatcacataatttagtgtaatta 39954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 41831991 - 41831950
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||| | ||||| |||||||    
T  41831991 taataatttgaaaaaatcacataattcagtgtaactacaagt 41831950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 49
Target Start/End: Complemental strand, 45208475 - 45208442
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtat 49  Q
    ||||||| ||||||||||||||||||||||||||    
T  45208475 aaaaaatgacataatttaatgtaattacaagtat 45208442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17468564 - 17468504
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||| ||||||||| ||||||||||||||    ||||||||||||| || ||||||||||    
T  17468564 acaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgttggtgtcgtgtc 17468504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18170538 - 18170494
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||| ||| ||||||||||||| |||||||| |||||||||||||    
T  18170538 acaattaaaaatttgaaaaaattacataattcaatgtaattacaa 18170494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 18634106 - 18634062
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||| ||| ||||||||||||| |||||||| |||||||||||||    
T  18634106 acaattaaaaatttgaaaaaattacataattcaatgtaattacaa 18634062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22596001 - 22596053
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcg 57  Q
    |||||||||| ||||||| |||||||| | ||||||||||||| || ||||||    
T  22596001 ctaataatttaaaaaaataacataattcagtgtaattacaagtgttggtgtcg 22596053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 27067351 - 27067229
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaa 103  Q
    |||||| |||||| ||||| ||||||||   ||||||||||||| |  |||||||||| ||||| ||||||||| ||||   ||||||||  ||| ||||    
T  27067351 actaatgatttgagaaaattacataattc--tgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtgtcgaacaccgga--acgtctaa 27067256  T
Q  104 tccaagaactgttcatgcttcatagtt 130  Q
    ||| || | ||| | ||||||||||||    
T  27067255 tccgaggagtgtccgtgcttcatagtt 27067229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 27101522 - 27101550
Alignment:
Q  5 ctaataatttgaaaaaatcacataattta 33  Q
    |||||||||||||||||||||||||||||    
T  27101522 ctaataatttgaaaaaatcacataattta 27101550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 47
Target Start/End: Original strand, 40332200 - 40332240
Alignment:
Q  7 aataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||| |||||||||||||| | |||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagt 40332240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 2e-23; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 24613757 - 24613630
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||||| |||||||||||||| ||||||| ||||||| |  ||||| |||| |||||||||||||||||||| ||||||| |  |||| |    
T  24613757 acaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtcatgtcggtgtcagacacgacacgtgtctgacaccaggacacgtc 24613658  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    |||||| || | ||| | ||||||||||    
T  24613657 taatcctaggagtgtccgtgcttcatag 24613630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 19482671 - 19482798
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||| || |||||||||| || |  ||||||||||||||  ||||| ||  ||| ||    
T  19482671 acaactaataatttgaaaatatcacataattcggtgtaattacaagtgttggtgtcgtgtcggtattggacacgacacgtgtccgacactgggacacacc 19482770  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    |||||| || | ||||| ||||||||||    
T  19482771 taatccgaggagtgttcgtgcttcatag 19482798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 30982930 - 30982827
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||| |||||| ||||||||||| || | |||||||| |||| |  |||||||||| ||||||||||||||||||||  ||||||||  ||||||||||    
T  30982930 ctaatgatttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcggtgtcagacacgacacgtgtccgacaccgggacacgcctaat 30982831  T
Q  105 ccaa 108  Q
    ||||    
T  30982830 ccaa 30982827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 80
Target Start/End: Original strand, 51701265 - 51701340
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgt 80  Q
    |||||||||||||||||| |||||||| | ||||||||||||| || |||||||||| |||||  |||||||||||    
T  51701265 ctaataatttgaaaaaattacataattgagtgtaattacaagtgttagtgtcgtgtcggtgtcgaacacgacacgt 51701340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 27706233 - 27706129
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||| ||||||||| |||||||||||||||||| ||||||||||||| |  |||||||||   |||| |||||||||||| |  || |||||  ||||||    
T  27706233 acaattaataatttaaaaaaatcacataatttagtgtaattacaagtgtgagtgtcgtgttaatgtcggacacgacacgtatccgataccgggacacgcc 27706134  T
Q  101 taatc 105  Q
    |||||    
T  27706133 taatc 27706129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 4383371 - 4383447
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    ||||||||||||||||||| ||||||||||| | ||||||||||| | |  |||||||||| |||||| |||||||||    
T  4383371 acaactaataatttgaaaa-atcacataattcagtgtaattacaaatgtcagtgtcgtgtcggtgtcaaacacgacac 4383447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 6485662 - 6485621
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagt 6485621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 82
Target Start/End: Original strand, 30838217 - 30838294
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    |||||||||||| ||||| | |||||||| |||||||| ||||||  |||||||||| ||||| ||| ||||||||||    
T  30838217 ctaataatttgataaaattatataatttagtgtaattataagtatcggtgtcgtgtcagtgtcggacgcgacacgtgt 30838294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 11596404 - 11596348
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  11596404 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtaggtgtcgtgtc 11596348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 12895168 - 12895112
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| || |||||||||||| |  ||||||||||    
T  12895168 ctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtc 12895112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 14465127 - 14465088
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattaca 44  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  14465127 ctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 6 - 136
Target Start/End: Original strand, 903930 - 904060
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||||| |||||||||||||| | |||||||| | ||||  || |||| || ||||  ||||||||| ||||  ||||| ||  |||  ||||||    
T  903930 taataatttgagaaaatcacataattcagtgtaattatatgtatcagtatcgtatcggtgttggacacgacatgtgtccgacactgggacacatctaatc 904029  T
Q  106 caagaactgttcatgcttcatagtttgaaat 136  Q
    |||||| ||| | |||||||||||| |||||    
T  904030 caagaaatgtccttgcttcatagttagaaat 904060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 4 - 42
Target Start/End: Complemental strand, 7214575 - 7214537
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  7214575 actaataatttgagaaaatcacataatttaatgtaatta 7214537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 28964300 - 28964258
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 28964258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 29205451 - 29205493
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 29205493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 37203271 - 37203313
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||||| |||||||||||||    
T  37203271 ctaataatttgaaaaaatgacataatttagtgtaattacaagt 37203313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 54580079 - 54580033
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||    
T  54580079 acaactaataatttgaaaaaatcacataattcagtgtaattataagt 54580033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 35158040 - 35157995
Alignment:
Q  2 caactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||    
T  35158040 caactaataatttggaaaaatcacataatttagtgtaattataagt 35157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3947818 - 3947762
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| |  ||||||||||    
T  3947818 ctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtc 3947762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 128
Target Start/End: Complemental strand, 22234931 - 22234819
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgt 115  Q
    |||||||||||||||| | |||||||  | || |  |||||||||| ||||| ||||||||||||||  |||||| |  |||  ||||||| |||| |||    
T  22234931 aaaaaatcacataattcagtgtaattctatgtgtcggtgtcgtgtcggtgtctgacacgacacgtgtccgacaccaggacacagctaatccgagaagtgt 22234832  T
Q  116 tcatgcttcatag 128  Q
    || ||||||||||    
T  22234831 tcgtgcttcatag 22234819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 44081628 - 44081592
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||| |||||||||||||||||    
T  44081628 taataatttgaaaaaatcatataatttaatgtaatta 44081592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 5414211 - 5414100
Alignment:
Q  18 aaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttc 117  Q
    ||||||||| |||  | |||||||| | ||||  |||||||||| ||||| |||||||||||||| |||||| ||  ||| ||| ||||||| | ||| |    
T  5414211 aaaatcacaaaatgcagtgtaattatatgtatcggtgtcgtgtcagtgtcggacacgacacgtgtctgacacagggacacaccttatccaaggagtgtcc 5414112  T
Q  118 atgcttcatagt 129  Q
     |||||||||||    
T  5414111 gtgcttcatagt 5414100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 33950143 - 33950178
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaat 40  Q
    |||||||||||| |||||||||||||||||||||||    
T  33950143 ctaataatttgagaaaatcacataatttaatgtaat 33950178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 2362027 - 2361985
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||||| |||||||| ||||    
T  2362027 ctaataatttgaaaaaattacataatttagtgtaattaaaagt 2361985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4157153 - 4157198
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||    
T  4157153 acaactaataatttgaaaa-atcacataatttagtgcaattacaagt 4157198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12895330 - 12895284
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||| |||||||||||||||||||||||||||  |||||||| ||||    
T  12895330 acaaataataatttgaaaaaatcacataattttgtgtaattataagt 12895284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 21945510 - 21945552
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  21945510 ctaataatttgaaaaaatgacataattcagtgtaattacaagt 21945552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 23293038 - 23292996
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  23293038 ctaataatttgaaaaaatcacataattcagtataattacaagt 23292996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 31800530 - 31800488
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||| ||||||| | ||||||||||||||||||||||    
T  31800530 ctaataattttaaaaaattaaataatttaatgtaattacaagt 31800488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40481640 - 40481685
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||    
T  40481640 acaactaataatttgaaaa-atcacataattcagtgtaattacaagt 40481685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 109
Target Start/End: Complemental strand, 19500899 - 19500806
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaag 109  Q
    |||||| |||||| |||| |||||||| | ||  | |||||||||| ||||| |||||||||||  | ||| ||||  ||||||||||||||||    
T  19500899 aaaaaaacacatattttagtgtaattatatgtgatggtgtcgtgtcggtgtcggacacgacacgcctctgataccgaggcacgcctaatccaag 19500806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 28084540 - 28084585
Alignment:
Q  16 aaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||||||| ||||||||||||||| |  ||||||||||    
T  28084540 aaaaaatcacataattcaatgtaattacaagtgtctgtgtcgtgtc 28084585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 28158015 - 28158052
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  28158015 ctaataatttgaaaaaatgacatgatttaatgtaatta 28158052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 47263993 - 47264094
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||| |||||||||||||||   ||||||||||| | |   |||| |||  |||||||| ||||||| ||| ||||||| |  ||||||||||    
T  47263993 ctaataatttgtaaaaatcacataattctgtgtaattacaaatgtcgatgtcatgttggtgtcagatacgacacatgtctgacaccaggacacgcctaat 47264092  T
Q  105 cc 106  Q
    ||    
T  47264093 cc 47264094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 847958 - 848062
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||| ||||| |||||||| | | ||||||||||| |  ||||| |||  ||||| ||||||| ||||||   |||||||  ||| ||||||    
T  847958 ctaataatttgagaaaattacataattcactataattacaagtgtcggtgtcttgttggtgtcggacacgaaacgtgtcgaacaccgggacacacctaat 848057  T
Q  105 ccaag 109  Q
    |||||    
T  848058 ccaag 848062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 888247 - 888207
Alignment:
Q  5 ctaataatttgaaaaaa-tcacataatttaatgtaattaca 44  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  888247 ctaataatttgaaaaaaatcacataatttaatataattaca 888207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 12797391 - 12797348
Alignment:
Q  3 aactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||||| | |||||||||||||    
T  12797391 aactaataatttgaaaaa-tcacataattcagtgtaattacaagt 12797348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 18491930 - 18491894
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  18491930 taataatttaaaaaaatcatataatttaatgtaatta 18491894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 35952669 - 35952613
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||| ||||||| |||||| |||||||||| | ||||  ||||||||||    
T  35952669 ctaataatttgataaaatcatataattcaatgtaattatatgtatcagtgtcgtgtc 35952613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 2e-23; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 14209116 - 14209243
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||| |||||||||||||||| | ||||||||||||| |  |||||||||| ||||| ||||||||||||||  |||| |||   || ||    
T  14209116 acaactaataattttaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacacgtgtacgacatcgggatacacc 14209215  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    ||||||||||| ||| | ||||||||||    
T  14209216 taatccaagaagtgtccgtgcttcatag 14209243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 4987343 - 4987242
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | ||||||||||||| || ||| |||||| ||||  ||||||||||||||  ||||||||  ||||||||||    
T  4987343 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgttggtgacgtgtcggtgttggacacgacacgtgtccgacaccgggacacgcctaat 4987244  T
Q  105 cc 106  Q
    ||    
T  4987243 cc 4987242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 104
Target Start/End: Original strand, 14832106 - 14832205
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||| | ||||||||||||||| |  |||||||||| || || ||||||||||||||  ||||||||  ||||||||||    
T  14832106 ctaataatttgaaaaaatcacataactcaatgtaattacaagtgtcagtgtcgtgtcggtatcggacacgacacgtgtccgacaccgggacacgcctaat 14832205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 41961706 - 41961579
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| ||||||| |||   ||||||||||||| |  |||||||||| || || ||||||||||||||  ||||| ||  ||||||    
T  41961706 acaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcc 41961607  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    |||||| |||| ||| | ||||||||||    
T  41961606 taatccgagaagtgtccgtgcttcatag 41961579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14216895 - 14217021
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||| |||| |||| |||||| | ||||||||||||| | ||||||||||  ||||| ||||||||||||||  ||||| ||  ||| ||    
T  14216895 acaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacc 14216994  T
Q  101 taatccaagaactgttcatgcttcata 127  Q
    |||||| |||| ||| | |||||||||    
T  14216995 taatccgagaagtgtccgtgcttcata 14217021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 14223024 - 14223150
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||| |||| |||| |||||| | ||||||||||||| | ||||||||||  ||||| ||||||||||||||  ||||| ||  ||| ||    
T  14223024 acaactaataattttaaaatatcatataattcagtgtaattacaagtgtccgtgtcgtgttagtgtcggacacgacacgtgtacgacactgggacacacc 14223123  T
Q  101 taatccaagaactgttcatgcttcata 127  Q
    |||||| |||| ||| | |||||||||    
T  14223124 taatccgagaagtgtccgtgcttcata 14223150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 15796345 - 15796223
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||||||||||||| |||||| | ||||||||||| | |  |||||||||  ||||| ||||| ||||||||   |||||||| |||||||||||    
T  15796345 taataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtcgtgtaggtgtcggacacaacacgtgtccaacaccggaacacgcctaatc 15796246  T
Q  106 caagaactgttcatgcttcatag 128  Q
    |||  | ||||| ||||||||||    
T  15796245 caaagagtgttcgtgcttcatag 15796223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 55401078 - 55401124
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  55401078 acaactaataatttgaaaaaatcacataatttagtgtaattacaagt 55401124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 34185175 - 34185050
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||| ||||||||||| |||| | ||||||||||||| |  ||||||||||  |||| |||| |||| ||||  ||||||||  ||||||||||    
T  34185175 ctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtcgtgtccatgtcggacaagacatgtgtccgacaccgggacacgcctaat 34185076  T
Q  105 ccaagaactgttcatgcttcatagtt 130  Q
    || || | ||| | ||||||||||||    
T  34185075 ccgaggagtgtccgtgcttcatagtt 34185050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 1509546 - 1509614
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacac 73  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |  ||||||| || ||||| |||||    
T  1509546 ctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtttcggtgtccgacac 1509614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 11313852 - 11313746
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtat-----tcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgc 99  Q
    |||||||||||| |||||||||||||||| |||||||| | || |     |||||||||||  |||||||||||| |||||||||||||| ||  ||| |    
T  11313852 ctaataatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcgtgttagtgtcagacacgtcacgtgtttgacactgggacactc 11313753  T
Q  100 ctaatcc 106  Q
    |||||||    
T  11313752 ctaatcc 11313746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 28812518 - 28812592
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacga 75  Q
    ||||||||||||||||| ||||||||||||| | |||| |||||||| |  |||||||||  |||||||||||||    
T  28812518 acaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtcgtgttggtgtcagacacga 28812592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 750674 - 750593
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    ||||||||||||||||||| |||||||||||   || |||||||||| |  |||||||||| || || ||||||||||||||    
T  750674 acaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgt 750593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 10268537 - 10268496
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  10268537 taataatttgaaaaaatcacataatttagtgtaattacaagt 10268496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Original strand, 14747568 - 14747637
Alignment:
Q  5 ctaataatttgaaaa-aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacac 73  Q
    ||||||||||||||| |||||||||||||| ||||||||||||  | |||||||||||||| || |||||    
T  14747568 ctaataatttgaaaaaaatcacataatttagtgtaattacaagggtccgtgtcgtgtctgtatccgacac 14747637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34910320 - 34910365
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaag 46  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||    
T  34910320 acaactaataatttgaaaaaatcacataattcagtgtaattacaag 34910365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 11665951 - 11666055
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||| ||||||||| |||||| |||||||| | || |  |||||||||   ||| ||||||||||||||| ||| | |||| ||||||||||    
T  11665951 ctaataatttgataaaatcacacaatttagtgtaattatatgtgtcggtgtcgtgttgatgttagacacgacacgtgtctgatatcggaacacgcctaat 11666050  T
Q  105 ccaag 109  Q
     ||||    
T  11666051 tcaag 11666055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 25064916 - 25065001
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccgg 92  Q
    ||||| ||||||||||||||||||||||| |||||||  | || || || ||||||  ||||| |||||||||||||| |||||||||    
T  25064916 ctaatgatttgaaaaaatcacataatttagtgtaatt--atgtgttggtatcgtgttggtgtcggacacgacacgtgtctgacaccgg 25065001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 25948939 - 25948883
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | |||||||| |||| || ||||||||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtc 25948883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 49651838 - 49651782
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  49651838 ctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtc 49651782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 61
Target Start/End: Original strand, 39756244 - 39756299
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||| |||||||||||||||||||| ||||||||||| |  ||||||||||    
T  39756244 taataatttaaaaaaatcacataatttaatataattacaagtgtcggtgtcgtgtc 39756299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10954955 - 10955001
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| | |||||| ||||||    
T  10954955 acaactaataatttgaaaaaatcacataattcagtgtaatcacaagt 10955001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 26508117 - 26508159
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  26508117 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 26508159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 28918008 - 28918050
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  28918008 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 28918050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 17568734 - 17568693
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||| ||||| ||||||||||||||||||||||||    
T  17568734 taataatttgagaaaattacataatttaatgtaattacaagt 17568693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 111
Target Start/End: Original strand, 55212971 - 55213075
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||| |||||||||||||||||| || |||||||||| |  |||| ||||| ||||| | ||| ||||||||  |||||||   ||||| |||||    
T  55212971 taataattttaaaaaatcacataatttagtgcaattacaagtgtcggtgt-gtgtcggtgtcgggcacaacacgtgtccgacaccgagacacgcataatc 55213069  T
Q  106 caagaa 111  Q
    ||||||    
T  55213070 caagaa 55213075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 16192801 - 16192729
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    ||||||||||| ||||| |||||||| | |||||||| | || ||  ||||||||| ||||||||||||||||    
T  16192801 taataatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcggtgtcagacacgacac 16192729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 27505253 - 27505370
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||  ||||||||||||||| | ||||||||||||| |  |||||||||||      ||||||||||||||  ||||||||  || |||||||    
T  27505253 ctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtct------gacacgacacgtgtccgacaccgggacatgcctaat 27505346  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || || | ||| | ||||||||||    
T  27505347 ccgaggagtgtccgtgcttcatag 27505370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 60
Target Start/End: Complemental strand, 15314924 - 15314873
Alignment:
Q  9 taatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgt 60  Q
    ||||||||||||||||||||||||| |||||||| | || || |||||||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Complemental strand, 8587069 - 8587031
Alignment:
Q  9 taatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  8587069 taatttgaaaaaatcacataattaagtgtaattacaagt 8587031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10335342 - 10335296
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| ||||||| |||| ||||| |||||||    
T  10335342 acaactaataatttgaaaaagtcacatattttagtgtaaatacaagt 10335296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 90
Target Start/End: Complemental strand, 17005672 - 17005586
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacacc 90  Q
    ||||||||||||| ||||||| |||||| | |||||||| |||| |  |||| ||||  ||||||||||  |||||||| |||||||    
T  17005672 actaataatttgataaaatcatataattcagtgtaattataagtgtcggtgttgtgttggtgtcagacataacacgtgtctgacacc 17005586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20503468 - 20503514
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||| |||||||||||||||| |||||||| | |||||||||||||    
T  20503468 acaacaaataatttgaaaaaatgacataattcagtgtaattacaagt 20503514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21257038 - 21256996
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | | |||||||||||    
T  21257038 ctaataatttgaaaaaatcacataattcagtataattacaagt 21256996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 51206405 - 51206363
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | ||||| |||||||    
T  51206405 ctaataatttgaaaaaatcacataattcagtgtaaatacaagt 51206363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 39
Target Start/End: Original strand, 5339116 - 5339149
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaa 39  Q
    ||||||||||| ||||||||||||||||||||||    
T  5339116 taataatttgagaaaatcacataatttaatgtaa 5339149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 7928457 - 7928494
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  7928457 ctaataatttgaaaaaatcacataattcagtgtaatta 7928494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 9624648 - 9624685
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  9624648 ctaataatttgagaaaatcacataattcaatgtaatta 9624685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 105
Target Start/End: Original strand, 14829697 - 14829797
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgt-gtttgacaccggagcacgcctaa 103  Q
    ||||||||||||||| ||||||||||| |  |||||||||||| |  |||||||||| ||||  ||||||| | || ||| ||||||||  |||||||||    
T  14829697 ctaataatttgaaaa-atcacataattcatggtaattacaagtgtcggtgtcgtgtcggtgttggacacgagatgtggttcgacaccgggacacgcctaa 14829795  T
Q  104 tc 105  Q
    ||    
T  14829796 tc 14829797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 27277890 - 27277853
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  27277890 ctaataatttgagaaaatcacataatttagtgtaatta 27277853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 49505206 - 49505169
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  49505206 ctaataatttgagaaaatcacataatttagtgtaatta 49505169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3164077 - 3164021
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | |||||  |||||| ||  |||||||||    
T  3164077 ctaataatttgaaaaaatcacataattcagtgtaagaacaagtgttgatgtcgtgtc 3164021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 4201404 - 4201440
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||||||||||| | ||||||||    
T  4201404 taataatttgaaaaaatcacataattaagtgtaatta 4201440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 14979188 - 14979224
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatt 41  Q
    ||||||||||||||||||||||||||| | |||||||    
T  14979188 ctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 26492257 - 26492213
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtat 49  Q
    |||||||||||||||||||| | |||| | |||||||||||||||    
T  26492257 ctaataatttgaaaaaatcatacaattcagtgtaattacaagtat 26492213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 32804591 - 32804555
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  32804591 taataatttgagaaaatcacataatttagtgtaatta 32804555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 42
Target Start/End: Original strand, 39002044 - 39002076
Alignment:
Q  10 aatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||||||| ||||||||||    
T  39002044 aatttgaaaaaatcacataattcaatgtaatta 39002076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 48202320 - 48202284
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||| ||||| |||||||||||||||||||||||||    
T  48202320 taatagtttgagaaaatcacataatttaatgtaatta 48202284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 3e-22; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 16766704 - 16766805
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  |||||||||| ||||| ||||| ||||||||  ||||||||  ||||||||||    
T  16766704 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgcctaat 16766803  T
Q  105 cc 106  Q
    ||    
T  16766804 cc 16766805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 31384923 - 31385048
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| |  |||||||||  ||||  ||||||||||||||   |||||||  ||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgt-agtgttggacacgacacgtgtcctacaccgggacacgcc 31385021  T
Q  101 taatccaagaactgttcatgcttcata 127  Q
    ||||||||| | ||| | |||||||||    
T  31385022 taatccaaggagtgtccgtgcttcata 31385048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 4118384 - 4118302
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgaca 88  Q
    |||||||||||||||||||||||||| ||||||||||||||| || || | ||||| ||||| ||||| | ||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgttggttttgtgtcagtgtcggacacaatacgtgtttgaca 4118302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 8365575 - 8365470
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| |||||||||||   ||||||||||||| |  |||||||||| || || ||||||||||||||  ||||| ||  ||||||    
T  8365575 acaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtcgtgtcggtatcggacacgacacgtgtccgacactgggacacgcc 8365476  T
Q  101 taatcc 106  Q
    ||||||    
T  8365475 taatcc 8365470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 17302559 - 17302667
Alignment:
Q  1 acaactaataatttgaaaa-aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgc 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||| |   ||||||||| || | |||||| ||||||||  |||| |||| ||| |    
T  17302559 acaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtcgtgtcagtattagacacaacacgtgtccgacatcggaacacac 17302658  T
Q  100 ctaatccaa 108  Q
    |||||||||    
T  17302659 ctaatccaa 17302667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 5970159 - 5970087
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    |||||||||||||||||||||||||| | ||||||||||| | |  |||||||||| ||||| ||||||||||    
T  5970159 taataatttgaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 5970087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10770730 - 10770670
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  10770730 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtc 10770670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 9522898 - 9523001
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||| |||||||||||||||| | ||||||||||||| |  |||| ||||| ||||| ||  ||||||||||  |||||||   ||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgttgtgtcggtgtcggatccgacacgtgtccgacaccgagacacgcctaat 9522997  T
Q  105 ccaa 108  Q
    ||||    
T  9522998 ccaa 9523001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 17841641 - 17841599
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  17841641 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 17841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 34595137 - 34595258
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||           ||| ||||| |||||||||||||| |||||||||  ||| ||    
T  34595137 acaactaataatttgaaaaaatcacataattcagtgtaattacaagt-----------gtcggtgtcggacacgacacgtgtctgacaccgggacacacc 34595225  T
Q  101 taatccaagaactgttcatgcttcatagtttga 133  Q
    |||||| || | ||| | |||||||||| ||||    
T  34595226 taatccgaggagtgtccgtgcttcatagattga 34595258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 426565 - 426524
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||| |||||||||||||||    
T  426565 taataatttgaaaaaatcacataattaaatgtaattacaagt 426524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 106
Target Start/End: Complemental strand, 9107422 - 9107321
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||||||||||||| |||| | ||||||||||||| |  |||||||||| ||||| ||||| ||  ||||  ||||||||  ||| ||||||    
T  9107422 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacaacgtgtgtccgacaccgggacacacctaat 9107323  T
Q  105 cc 106  Q
    ||    
T  9107322 cc 9107321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 8777029 - 8776973
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcg 57  Q
    |||||||||||||||||||||||||| |||| | ||||||||||||| || ||||||    
T  8777029 acaactaataatttgaaaaaatcacaaaattcagtgtaattacaagtgttggtgtcg 8776973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 17435206 - 17435290
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacac 89  Q
    |||||||||| ||||||| |||||||| | ||||||||||||| || ||||  ||||  |||| ||||||||||||||| |||||    
T  17435206 ctaataattttaaaaaattacataattcagtgtaattacaagtgttagtgttttgtcgatgtcggacacgacacgtgttcgacac 17435290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 189
Target Start/End: Original strand, 33722445 - 33722504
Alignment:
Q  130 ttgaaatcaaacaattttatatgttttgttcttcatcctgctcatgtttctagctttatt 189  Q
    |||||||||||||||||||||||   |||||||| |||||||||||||||  ||||||||    
T  33722445 ttgaaatcaaacaattttatatgccatgttcttcctcctgctcatgtttccggctttatt 33722504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 853915 - 853869
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| | || ||||||||||    
T  853915 acaactaataatttgaaaaaatcacataattaagtgcaattacaagt 853869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1681761 - 1681807
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||| ||||| | |||||||||||||    
T  1681761 acaactaataatttgaaaaaatcacgtaattcagtgtaattacaagt 1681807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7801212 - 7801166
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||||    
T  7801212 acaactaataatttgaaaaaatcacataattcagcgtaattacaagt 7801166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 10827617 - 10827551
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtc 67  Q
    ||||||||||||||||| |||||||||||  || ||||||||||| |||  ||||||| ||||||||    
T  10827617 acaactaataatttgaagaaatcacataacatagtgtaattacaaatatcagtgtcgtatctgtgtc 10827551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15489788 - 15489742
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||| ||| |||| |||||||||||||||    
T  15489788 acaactaataatttgaaaaaattacacaattcaatgtaattacaagt 15489742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 16833311 - 16833357
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||||| || | |||||||||||||    
T  16833311 acaactaataatttgaaaaaatcacatacttcagtgtaattacaagt 16833357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 403915 - 403874
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||||| ||||| |||||||    
T  403915 taataatttgaaaaaatcacataatttagtgtaactacaagt 403874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 8713987 - 8714060
Alignment:
Q  6 taataatttgaaaa-aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacac 78  Q
    |||||||||||||| |||||||||||| | ||||||||||| | |  |||||||||| ||||| ||||||||||    
T  8713987 taataatttgaaaaaaatcacataattcagtgtaattacaaatgtgggtgtcgtgtcggtgtcggacacgacac 8714060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 109
Target Start/End: Original strand, 12696331 - 12696429
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||||||||| |||||||| | ||||||||||||| |  |||||      ||||| |||||||||||||| |||||||||  ||| ||| ||    
T  12696331 ctaataatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtc------gtgtcggacacgacacgtgtctgacaccgggacacaccttat 12696424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Complemental strand, 16488595 - 16488518
Alignment:
Q  52 gtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatagt 129  Q
    |||||||||| ||||| |||||||||||||| || ||| ||  ||||||| ||||||| | ||||| |||||||||||    
T  16488595 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatagt 16488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 28715302 - 28715414
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||||||||| |||||||| | |||||||||||||           ||| ||||| ||||||||||||||| ||||||||  ||||||||||    
T  28715302 ctaataatttgaaaaaatgacataattcagtgtaattacaagt-----------gtcggtgtcggacacgacacgtgttcgacaccgggacacgcctaat 28715390  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
     | |||| ||| | ||||||||||    
T  28715391 tcgagaagtgtacgtgcttcatag 28715414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 33001341 - 33001304
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  33001341 ctaataatttgaaaaaatcacataattaaatgtaatta 33001304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 2117083 - 2117138
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| |||| ||||| ||||  ||||||||||||    
T  2117083 ctaataatttgaaaaaatcacataattcaatgcaattataagt-gtcgtgtcgtgtc 2117138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 7930308 - 7930368
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||| |||||||||||||||||||||||||||| || |||| ||||| |  ||||||||||    
T  7930308 acaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtcgtgtc 7930368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 128
Target Start/End: Original strand, 18367890 - 18367966
Alignment:
Q  52 gtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatag 128  Q
    |||||||||| |||||||||||||||| ||| |||||| ||  ||||||| ||||||| | ||| | ||||||||||    
T  18367890 gtgtcgtgtcggtgtcagacacgacacatgtctgacacggggacacgccttatccaaggagtgtccgtgcttcatag 18367966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 147 - 183
Target Start/End: Complemental strand, 21241955 - 21241919
Alignment:
Q  147 tatatgttttgttcttcatcctgctcatgtttctagc 183  Q
    ||||||||||||| |||||||||||||||||||||||    
T  21241955 tatatgttttgtttttcatcctgctcatgtttctagc 21241919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 21395359 - 21395292
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacac 73  Q
    |||||||||||| ||||| |||||||||| ||||||||||||| |  |||||||||| ||||| |||||    
T  21395359 ctaataatttgagaaaat-acataatttagtgtaattacaagtgtcggtgtcgtgtcagtgtcggacac 21395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Original strand, 10842539 - 10842574
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaat 40  Q
    ||||||||||||||||||||||||||||| ||||||    
T  10842539 ctaataatttgaaaaaatcacataatttagtgtaat 10842574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 7151419 - 7151473
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtg 59  Q
    ||||||||||||||||||||||||||| | |||||||| | || || ||||||||    
T  7151419 ctaataatttgaaaaaatcacataattaagtgtaattatatgtgttggtgtcgtg 7151473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 7938123 - 7938165
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| |||||||| |||||||| ||||    
T  7938123 ctaataatttgaaaaaatcatataatttagtgtaattataagt 7938165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 7977882 - 7977840
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  7977882 ctaataatttgaaaaaattacataattcagtgtaattacaagt 7977840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 9658928 - 9658974
Alignment:
Q  58 tgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||| |||| ||||||||||||||| |||||||||| ||||||||||    
T  9658928 tgtcggtgttagacacgacacgtgtctgacaccggaacacgcctaat 9658974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 31959166 - 31959208
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  31959166 ctaataatttgaaaaaatcacataatgcagtgtaattacaagt 31959208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 7086802 - 7086839
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  7086802 ctaataatttgagaaaatcacataatttagtgtaatta 7086839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 8805624 - 8805587
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  8805624 ctaataatttgagaaaatcacataatttagtgtaatta 8805587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 9195806 - 9195729
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    |||||||||||| ||||| |||||||||| |||||||| | || |  |||||||||  ||||| ||||||||| ||||    
T  9195806 ctaataatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgtaggtgtctgacacgacatgtgt 9195729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 24115903 - 24115862
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||| |||||||||||||||| ||| ||||||    
T  24115903 acaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 99
Target Start/End: Complemental strand, 25038122 - 25038029
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgc 99  Q
    ||||||||||| ||||| |||||||||| ||||||||||| | |  || | ||||  ||||| ||||||||||||||  |||||| || |||||    
T  25038122 taataatttgagaaaattacataatttagtgtaattacaaatgtcggtattgtgttggtgtccgacacgacacgtgtccgacaccagaacacgc 25038029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 57 - 106
Target Start/End: Original strand, 29020960 - 29021009
Alignment:
Q  57 gtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatcc 106  Q
    |||| |||||| ||||||||||||||| |||||||  |||||||||||||    
T  29020960 gtgtttgtgtcggacacgacacgtgttcgacaccgaggcacgcctaatcc 29021009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 30866196 - 30866159
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| |||||||||||||| ||||||||||    
T  30866196 ctaataatttgagaaaatcacataattcaatgtaatta 30866159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 34225865 - 34225824
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||| ||||||| | ||||||||    
T  34225865 acaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 9617442 - 9617478
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||| |||||||||||||| ||||||||||    
T  9617442 taataatttgagaaaatcacataattcaatgtaatta 9617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 10889026 - 10888970
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||| |||||||||||||||| ||| |||| | || || ||||||||||    
T  10889026 ctaataatttgataaaatcacataatttagtgtgattatatgtgttagtgtcgtgtc 10888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 66
Target Start/End: Complemental strand, 18252802 - 18252742
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgt 66  Q
    ||||||||| ||||||| |||||||||| |||||||||| || |  || ||||||||||||    
T  18252802 taataatttaaaaaaatgacataatttagtgtaattacaggtgtcggtatcgtgtctgtgt 18252742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 183
Target Start/End: Original strand, 21286749 - 21286789
Alignment:
Q  143 attttatatgttttgttcttcatcctgctcatgtttctagc 183  Q
    ||||||||||| ||||| || ||||||||||||||||||||    
T  21286749 attttatatgtcttgtttttaatcctgctcatgtttctagc 21286789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 44
Target Start/End: Original strand, 25096429 - 25096469
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattaca 44  Q
    ||||||||||||| ||||||||||||| || ||||||||||    
T  25096429 actaataatttgagaaaatcacataatctagtgtaattaca 25096469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 129
Target Start/End: Original strand, 28152146 - 28152218
Alignment:
Q  57 gtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatagt 129  Q
    ||||| ||||| ||||||||||||||  ||||||||  || ||||||||| || | ||||| |||||||||||    
T  28152146 gtgtcggtgtcggacacgacacgtgtccgacaccgggacaggcctaatccgaggagtgttcgtgcttcatagt 28152218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 33709853 - 33709893
Alignment:
Q  138 aaacaattttatatgttttgttcttcatcctgctcatgttt 178  Q
    |||| ||||||||||||||||||||| |||||||| |||||    
T  33709853 aaactattttatatgttttgttcttcctcctgctcttgttt 33709893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 241601 - 241724
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||| ||||||||||||||||| ||||||||  ||| |  |||||||||  ||||| ||||||||||||||  ||||||||  ||||||||||    
T  241601 ctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtcgtgttggtgtcggacacgacacgtgtccgacaccgggacacgcctaat 241700  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    || |||| ||| | ||||||||||    
T  241701 ccgagaagtgtccgtgcttcatag 241724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 5e-21; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 5 - 128
Target Start/End: Complemental strand, 30717582 - 30717459
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |   |||||||||  |||| ||||||||||||||| ||||| ||   |||||||||    
T  30717582 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtcgtgtcgttgtcggacacgacacgtgttcgacactgggatacgcctaat 30717483  T
Q  105 ccaagaactgttcatgcttcatag 128  Q
    ||||| | ||| | ||||||||||    
T  30717482 ccaaggagtgtccgtgcttcatag 30717459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 7 - 128
Target Start/End: Original strand, 37419752 - 37419873
Alignment:
Q  7 aataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatcc 106  Q
    |||||||||||||||||||| |||| | |||||||||||||    |||||||||| ||||| |||||||  |||||  ||||||||  ||||||||||||    
T  37419752 aataatttgaaaaaatcacaaaattcagtgtaattacaagtgccggtgtcgtgtcggtgtcggacacgatgcgtgtccgacaccgggacacgcctaatcc 37419851  T
Q  107 aagaactgttcatgcttcatag 128  Q
     || | ||| | ||||||||||    
T  37419852 gaggagtgtccgtgcttcatag 37419873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 26769514 - 26769641
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| ||||||| || |  ||||||||||||| |  ||||| |||| || || ||||||||||||||  ||||| ||  ||||||    
T  26769514 acaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtcatgtcggtatcggacacgacacgtgtccgacactgggacacgcc 26769613  T
Q  101 taatccaagaactgttcatgcttcatag 128  Q
    |||||| || | ||| | ||||||||||    
T  26769614 taatccgaggagtgtccgtgcttcatag 26769641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 105
Target Start/End: Complemental strand, 11223915 - 11223816
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||| ||||||||||| |||||||| | ||||||||||||| |  ||||| |||  ||||| |||||||||| ||| |||||||||  ||||||||||    
T  11223915 ctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtcatgtaggtgtcggacacgacac-tgtctgacaccgggacacgcctaat 11223817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 126
Target Start/End: Original strand, 15657868 - 15657992
Alignment:
Q  2 caactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcct 101  Q
    |||||||||||||| ||||||||||||||| | ||||||||||| | |  |||||||||   |||| ||| ||||||||||  ||| ||||  |||||||    
T  15657868 caactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgttgatgtcggacgcgacacgtgtccgacgccgggacacgcct 15657967  T
Q  102 aatccaagaactgttcatgcttcat 126  Q
    | ||| || | ||| ||||||||||    
T  15657968 agtccgaggagtgtccatgcttcat 15657992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 30335420 - 30335464
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||||||||||||||||||||| |||||||||| |||||||||||    
T  30335420 acaactaataatttgaaaaaatgacataatttagtgtaattacaa 30335464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18841069 - 18841023
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||| |||||||| | |||||||||||||    
T  18841069 acaactaataatttgaaaaaattacataattaagtgtaattacaagt 18841023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 20539726 - 20539684
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  20539726 ctaataatttgaaaaaatcatataatttagtgtaattacaagt 20539684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 37558984 - 37559026
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||| ||||||||||||||| |||||||||||||||    
T  37558984 ctaataatttgtaaaaatcacataattcaatgtaattacaagt 37559026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 18256031 - 18255990
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||| ||||||||||||||||||||||||||| ||||    
T  18256031 taataatttaaaaaaatcacataatttaatgtaattagaagt 18255990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 30404901 - 30404860
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  30404901 taataatttgaaaaaatcacataattcagtgtaattacaagt 30404860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 36756400 - 36756295
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||| |||| |||||||| | |||||||| |||| |  |||||||||  |||||  |||| |||| |||  ||||||| | ||||||    
T  36756400 acaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtcgtgttagtgtcgaacacaacacatgtccgacaccgcaacacgcc 36756301  T
Q  101 taatcc 106  Q
    ||||||    
T  36756300 taatcc 36756295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 12940991 - 12940947
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||||||||||||||||||||||| |||||| | |||||||||||    
T  12940991 acaactaataatttgaaaaaatcatataattcagtgtaattacaa 12940947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 33153431 - 33153487
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||| |||| |||||||||||||||| | ||||||||||||| | |||||||||||    
T  33153431 ctaatgatttaaaaaaatcacataattcagtgtaattacaagtgtccgtgtcgtgtc 33153487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 974750 - 974809
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgt 60  Q
    ||||||||||||||||||| ||||||| ||| | ||||||||||||| |  |||||||||    
T  974750 acaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtcgtgt 974809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19536454 - 19536407
Alignment:
Q  1 acaactaataatttgaaaaaa-tcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||| |||||||||| | |||||||||||||    
T  19536454 acaactaataatttgaaaaaaatcacataattcagtgtaattacaagt 19536407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 2438771 - 2438729
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||| |||||||||||||||| | |||||||||||||    
T  2438771 ctaataatttcaaaaaatcacataattcagtgtaattacaagt 2438729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 4882748 - 4882678
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacga 75  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |   ||||||||| |||||||||||||    
T  4882748 ctaattatttgaaaaaatgatataattcagtgtaattacaagtgtcgatgtcgtgtcggtgtcagacacga 4882678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 12668477 - 12668419
Alignment:
Q  3 aactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||||||||||| |||||||| | |||||||| |||| |  ||||||||||    
T  12668477 aactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtc 12668419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21374751 - 21374709
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  21374751 ctaataatttgaaaaaattacataattcagtgtaattacaagt 21374709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 36409676 - 36409642
Alignment:
Q  8 ataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||||||||||||||||| ||||||||    
T  36409676 ataatttgaaaaaatcacataatttagtgtaatta 36409642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 5040739 - 5040783
Alignment:
Q  5 ctaataatttgaaaa--aatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||  |||||||||||| |||||||||||||||    
T  5040739 ctaataatttgaaaaaaaatcacataattcaatgtaattacaagt 5040783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Original strand, 28677916 - 28677953
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||||||||||||| | ||||||||    
T  28677916 ctaataatttgaaaaaatcacataattcagtgtaatta 28677953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 33
Target Start/End: Complemental strand, 3415042 - 3415014
Alignment:
Q  5 ctaataatttgaaaaaatcacataattta 33  Q
    |||||||||||||||||||||||||||||    
T  3415042 ctaataatttgaaaaaatcacataattta 3415014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34785038 - 34784950
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacac 89  Q
    |||||||||  ||| | |||||||||||||||| |||||||| | || |  |||||||||| || || |||||||||| ||| ||||||    
T  34785038 acaactaatttttttagaaaatcacataatttagtgtaattatatgtgtcggtgtcgtgtcggtatcggacacgacacctgtctgacac 34784950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 38117211 - 38117159
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcg 57  Q
    |||||||||||||||||||||||| ||   ||||||||||||| || ||||||    
T  38117211 ctaataatttgaaaaaatcacatacttcggtgtaattacaagtgttggtgtcg 38117159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 40361805 - 40361769
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  40361805 taataatttgaaaaaattacataatttagtgtaatta 40361769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 49; Significance: 3e-19; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21542033 - 21542141
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    |||||||||||||| |||| || |||||||| | ||||||||||||| |  |||||||||| ||||| ||||||||||||||  ||||||||  ||||||    
T  21542033 acaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtcgtgtcggtgtcggacacgacacgtgtccgacaccgggacacgcc 21542132  T
Q  101 taatccaag 109  Q
     ||||||||    
T  21542133 gaatccaag 21542141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 39698548 - 39698672
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  |||||||||| ||||| ||||||||| || |  |||||||   ||||||||||    
T  39698548 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtcggtgtcggacacgacatgtatccgacaccgagacacgcctaat 39698647  T
Q  105 ccaagaactgttcatgcttcatagt 129  Q
    || || | ||| | |||||||||||    
T  39698648 ccgaggagtgtccgtgcttcatagt 39698672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 19579708 - 19579809
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||||| |||||||||||||||| || |||||||||| |  |||||||||| ||||| |||||||||  ||| | |||||||  ||||||||||    
T  19579708 ctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtcgtgtcagtgtcggacacgacatatgtctaacaccgggacacgcctaat 19579807  T
Q  105 cc 106  Q
    ||    
T  19579808 cc 19579809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 21522757 - 21522860
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||| ||||||| |||||||| | ||||||||||| | |  |||||||||| ||||| ||||||||||||||  | ||||||  ||||||||||    
T  21522757 ctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaat 21522856  T
Q  105 ccaa 108  Q
    ||||    
T  21522857 ccaa 21522860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 21533323 - 21533426
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    |||||||||| ||||||| |||||||| | ||||||||||| | |  |||||||||| ||||| ||||||||||||||  | ||||||  ||||||||||    
T  21533323 ctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtcgtgtcggtgtcggacacgacacgtgtccggcaccgggacacgcctaat 21533422  T
Q  105 ccaa 108  Q
    ||||    
T  21533423 ccaa 21533426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 7677712 - 7677813
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaat 104  Q
    ||||||||||||||||||||||||||| | || ||||| |||| |  |||||||||| ||||| |||||| ||| |||  ||||||||  ||||||||||    
T  7677712 ctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtcgtgtcggtgtctgacacgtcacatgtccgacaccgggacacgcctaat 7677811  T
Q  105 cc 106  Q
    ||    
T  7677812 cc 7677813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 14674276 - 14674318
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  14674276 ctaataatttgaaaaaatcacataatttagtgtaattacaagt 14674318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 15405111 - 15405065
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||    
T  15405111 acaactaataatttgaaaaaatcatataattcaatgtaattacaagt 15405065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 31084330 - 31084372
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  31084330 ctaataatttgaaaaaatcacataattcaatgtaattacaagt 31084372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33178028 - 33178074
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||    
T  33178028 acaactaataatttaaaaaaatcacataatttagtgtaattacaagt 33178074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 5894889 - 5894829
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||| |  ||||||||||    
T  5894889 acaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtc 5894829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 12159955 - 12159999
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||||||||||||| |||||| |||||||||||||||||||||||    
T  12159955 acaactaataatttaaaaaaaacacataatttaatgtaattacaa 12159999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 12641682 - 12641765
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacac 89  Q
    ||||||||| |||||||||||||||||| | ||||| || || |  |||||||||  ||||||||||| ||||||||| |||||    
T  12641682 taataatttaaaaaaatcacataatttagtataattgcacgtgtcagtgtcgtgttggtgtcagacacaacacgtgttcgacac 12641765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 30183552 - 30183655
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| ||||||| |||   | ||||||||||| |  |||||||||  || |||||||||||||||||  ||||| ||  ||||||    
T  30183552 acaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtcgtgttggtatcagacacgacacgtgtccgacactgggacacgcc 30183651  T
Q  101 taat 104  Q
    ||||    
T  30183652 taat 30183655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 40131624 - 40131699
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgac 76  Q
    ||||||||||||||||||||||||||||||| | | |||||| || |||  ||||||| ||  |||||||||||||    
T  40131624 acaactaataatttgaaaaaatcacataattcagtttaattataaatatcggtgtcgtatcgatgtcagacacgac 40131699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 6247629 - 6247671
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  6247629 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 6247671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 8420034 - 8420076
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| |||||||||||||||    
T  8420034 ctaataatttgaaaaaataacataattcaatgtaattacaagt 8420076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10298572 - 10298618
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| |||||||||  |||||||||||||||    
T  10298572 acaactaataatttgaaaaagtcacataatacaatgtaattacaagt 10298618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21191108 - 21191066
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  21191108 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 21191066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 21576797 - 21576755
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  21576797 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 21576755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 21814315 - 21814392
Alignment:
Q  52 gtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatccaagaactgttcatgcttcatagt 129  Q
    |||||||||| ||||| |||||||||||||| || ||| ||  ||||||| ||||||| | ||||| |||||||||||    
T  21814315 gtgtcgtgtcggtgtcggacacgacacgtgtctggcacggggacacgccttatccaaggaatgttcgtgcttcatagt 21814392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 30098334 - 30098459
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||||| |||||||||||||| |||||||||| |  | |  || ||| ||| ||||| ||||||||||||||  |||||| |  ||| |||||||    
T  30098334 taataatttgagaaaatcacataattcaatgtaattatagatgtcggtatcgagtcagtgtcggacacgacacgtgtcagacaccaggacacacctaatc 30098433  T
Q  106 caagaactgttcatgcttcatagttt 131  Q
    | || | ||| | |||||||||||||    
T  30098434 cgaggaatgtccgtgcttcatagttt 30098459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 41995474 - 41995515
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||| ||||||||||||||||| ||||||||||    
T  41995474 acaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 21351961 - 21351889
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacac 73  Q
    ||||||||||||| |||||| |||||||||| | ||||||||||||| |  ||||| |||| ||||| |||||    
T  21351961 acaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtcatgtcggtgtccgacac 21351889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 61
Target Start/End: Complemental strand, 13287450 - 13287395
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    |||||||||||||||||||||||||| | ||||| ||||||| |  ||||||||||    
T  13287450 taataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtcgtgtc 13287395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Original strand, 16881144 - 16881178
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaat 40  Q
    ||||||||||||||||| |||||||||||||||||    
T  16881144 taataatttgaaaaaatgacataatttaatgtaat 16881178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 35017043 - 35017081
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  35017043 actaataatttgagaaaatcacataatttagtgtaatta 35017081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 42893367 - 42893409
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||  | |||||||||||||    
T  42893367 ctaataatttgaaaaaatcacataatccagtgtaattacaagt 42893409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 43001807 - 43001849
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||| | |||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagt 43001849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 23012460 - 23012423
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaatta 42  Q
    |||||||||||| ||||||| |||||||||||||||||    
T  23012460 ctaataatttgagaaaatcatataatttaatgtaatta 23012423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Complemental strand, 24906352 - 24906311
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||| |||||||| | |||||||||||||    
T  24906352 taataatttgaaaaaatgacataattcagtgtaattacaagt 24906311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 82
Target Start/End: Complemental strand, 32766995 - 32766918
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgt 82  Q
    |||||||||||| |||||| || |||| |||||||||| | || || |||||||||| |||||  | |||||||||||    
T  32766995 ctaataatttgagaaaatcgcacaattcaatgtaattatatgtgtttgtgtcgtgtcggtgtcgaaaacgacacgtgt 32766918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 38749614 - 38749578
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaatta 42  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  38749614 taataatttgaaaaaatgacataattcaatgtaatta 38749578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0719 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0719
Description:

Target: scaffold0719; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 5714 - 5779
Alignment:
Q  129 tttgaaatcaaacaattttatatgttttgttcttcatcctgctcatgtttctagctttattctttat 195  Q
    |||||||| ||| |||||||||||| ||||||||| || ||||||||||||||||||||||||||||    
T  5714 tttgaaataaaagaattttatatgtcttgttcttcctc-tgctcatgtttctagctttattctttat 5779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Original strand, 19787 - 19852
Alignment:
Q  129 tttgaaatcaaacaattttatatgttttgttcttcatcctgctcatgtttctagctttattctttat 195  Q
    |||||||| |||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  19787 tttgaaataaaacaattttatatgtcttgttcttcct-ctgatcatgtttctagctttattctttat 19852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 195
Target Start/End: Complemental strand, 39950 - 39885
Alignment:
Q  129 tttgaaatcaaacaattttatatgttttgttcttcatcctgctcatgtttctagctttattctttat 195  Q
    |||||||| |||||||||||||||| ||||||||| | ||| |||||||||||||||||||||||||    
T  39950 tttgaaataaaacaattttatatgtcttgttcttcct-ctgttcatgtttctagctttattctttat 39885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 17805 - 17759
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||    
T  17805 acaactaataatttgaaaaaatcacataatttagtgtaattacaagt 17759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 83
Target Start/End: Complemental strand, 263424 - 263346
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtt 83  Q
    |||||||||||| |||| ||||||||| | |||||||| |||| |  |||||||||| |||||||||||||||||||||    
T  263424 ctaataatttgagaaaaccacataattcagtgtaattataagtgtcagtgtcgtgtcggtgtcagacacgacacgtgtt 263346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14533 - 14579
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||    
T  14533 acaactaataatttgaaaaaatcacataattcagtgtaattacaagt 14579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 6 - 128
Target Start/End: Complemental strand, 3900 - 3778
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatc 105  Q
    ||||||||| |||||||||||||||| | ||||||||||||| |  |||||||||  ||||| |||||||||| |||  |||| ||   |||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgttggtgtcggacacgacacatgtccgacatcgagacacgcctaatc 3801  T
Q  106 caagaactgttcatgcttcatag 128  Q
    | || | ||| | ||||||||||    
T  3800 cgaggagtgtccttgcttcatag 3778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 20179 - 20235
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtc 61  Q
    ||||||||||||||||||||||||||| | ||||||||||||| |  ||||||||||    
T  20179 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcagtgtcgtgtc 20235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 8 - 41
Target Start/End: Original strand, 19465 - 19498
Alignment:
Q  8 ataatttgaaaaaatcacataatttaatgtaatt 41  Q
    |||| |||||||||||||||||||||||||||||    
T  19465 ataaattgaaaaaatcacataatttaatgtaatt 19498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 111
Target Start/End: Original strand, 53189 - 53293
Alignment:
Q  7 aataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcctaatcc 106  Q
    |||||||||| |||||||||||||| | |||||||| |||| |  ||| |||||| ||||| |||| |||||||||  ||||||||  ||||  ||||||    
T  53189 aataatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccgggacacgtttaatcc 53288  T
Q  107 aagaa 111  Q
    |||||    
T  53289 aagaa 53293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7367 - 7321
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||| ||||||||||||||||| |||||||| ||||    
T  7367 acaactaataatttggaaaaatcacataatttagtgtaattataagt 7321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 35; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 51818 - 51860
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  51818 ctaataatttgaaaaaatcacataattcagtgtaattacaagt 51860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 9800 - 9716
Alignment:
Q  4 actaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgaca 88  Q
    ||||||||||||| |||||||| ||||| | |||||||| | || |  |||||||||  |||||||||||||||| ||| |||||    
T  9800 actaataatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgttggtgtcagacacgacacttgtctgaca 9716  T

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Target: scaffold0019 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 106
Target Start/End: Original strand, 71730 - 71833
Alignment:
Q  5 ctaataatttgaaaa--aatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgccta 102  Q
    |||||||||||||||  ||||||| |||| | ||||||||| ||| |  |||||||||| ||||| ||||| ||||||||  ||||||||  |||| |||    
T  71730 ctaataatttgaaaaaaaatcacacaattcagtgtaattactagtgtcagtgtcgtgtcggtgtcggacacaacacgtgtccgacaccgggacacgacta 71829  T
Q  103 atcc 106  Q
    ||||    
T  71830 atcc 71833  T

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Target: scaffold0450 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 8691 - 8588
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagtattcgtgtcgtgtctgtgtcagacacgacacgtgtttgacaccggagcacgcc 100  Q
    ||||||||||||||||||| |||||||||||   | ||||||||| | |  |||||||||| || || ||||||| ||||||  ||||| ||  ||||||    
T  8691 acaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtcgtgtcggtatcggacacgatacgtgtccgacactggtacacgcc 8592  T
Q  101 taat 104  Q
    ||||    
T  8591 taat 8588  T

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Target: scaffold0027 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 45
Target Start/End: Original strand, 46690 - 46729
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||||||||||||||||||||||||| | |||||||||||    
T  46690 taataatttgaaaaaatcacataattcagtgtaattacaa 46729  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 178875 - 178828
Alignment:
Q  1 acaactaataatttgaaaaaatca-cataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||||| ||||||| | |||||||||||||    
T  178875 acaactaataatttgaaaaaatcatcataattcagtgtaattacaagt 178828  T

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Target: scaffold0722 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 7084 - 7042
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||| |||||||||| | |||||||||||    
T  7084 ctaataatttgaaaaaattacataatttagtataattacaagt 7042  T

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Target: scaffold0652 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 514 - 472
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||||| |||| | |||||||||||||    
T  514 ctaataatttgaaaaaatcacaaaattcagtgtaattacaagt 472  T

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Target: scaffold0246 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19579 - 19624
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||||||||||||||||| ||||||||||| | |||||||||||||    
T  19579 acaactaataatttgaaaa-atcacataattcagtgtaattacaagt 19624  T

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Target: scaffold0053 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 8805 - 8847
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    |||||||||||||||||||| || ||||| |||||||||||||    
T  8805 ctaataatttgaaaaaatcatattatttagtgtaattacaagt 8847  T

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Target: scaffold0306 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 13403 - 13448
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaag 46  Q
    |||||||||||||||| |||||||||||||| | || |||||||||    
T  13403 acaactaataatttgagaaaatcacataattcagtgcaattacaag 13448  T

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Target: scaffold0152 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21924 - 21879
Alignment:
Q  1 acaactaataatttgaaaaaatcacataatttaatgtaattacaag 46  Q
    |||||||||||||||| |||||||||||||| | || |||||||||    
T  21924 acaactaataatttgagaaaatcacataattcagtgcaattacaag 21879  T

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Target: scaffold0021 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 6 - 47
Target Start/End: Original strand, 130490 - 130531
Alignment:
Q  6 taataatttgaaaaaatcacataatttaatgtaattacaagt 47  Q
    ||||| |||||||||||||||||||| | |||||||||||||    
T  130490 taatagtttgaaaaaatcacataattcagtgtaattacaagt 130531  T

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Target: scaffold0066 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 33415 - 33375
Alignment:
Q  5 ctaataatttgaaaaaatcacataatttaatgtaattacaa 45  Q
    |||||||||||||||||| |||||||| | |||||||||||    
T  33415 ctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

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