View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5746_low_3 (Length: 681)

Name: NF5746_low_3
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5746_low_3
NF5746_low_3
[»] chr7 (45 HSPs)
chr7 (121-536)||(41353852-41354267)
chr7 (541-670)||(38472851-38472980)
chr7 (541-670)||(46438235-46438364)
chr7 (541-668)||(24227147-24227274)
chr7 (19-120)||(37114424-37114525)
chr7 (19-119)||(13169159-13169259)
chr7 (19-120)||(46438130-46438231)
chr7 (20-120)||(22155352-22155452)
chr7 (20-120)||(22211267-22211367)
chr7 (19-119)||(38472746-38472846)
chr7 (19-119)||(39858174-39858274)
chr7 (19-114)||(6604897-6604992)
chr7 (19-118)||(48851042-48851141)
chr7 (25-118)||(35691927-35692020)
chr7 (19-120)||(34775534-34775635)
chr7 (21-118)||(38550017-38550115)
chr7 (19-120)||(45360788-45360889)
chr7 (597-670)||(48851253-48851326)
chr7 (25-118)||(77511-77604)
chr7 (597-670)||(22155169-22155242)
chr7 (597-670)||(22211084-22211157)
chr7 (597-670)||(38550227-38550300)
chr7 (597-670)||(45360605-45360678)
chr7 (19-118)||(47384778-47384877)
chr7 (597-670)||(6604709-6604782)
chr7 (19-119)||(24227048-24227142)
chr7 (597-666)||(47384989-47385058)
chr7 (597-670)||(34775745-34775818)
chr7 (541-598)||(45360727-45360784)
chr7 (25-105)||(27664943-27665023)
chr7 (25-118)||(20479174-20479267)
chr7 (541-598)||(38550121-38550178)
chr7 (597-669)||(77327-77399)
chr7 (597-669)||(35692132-35692204)
chr7 (541-590)||(6604839-6604888)
chr7 (541-598)||(34775639-34775696)
chr7 (541-598)||(48851147-48851204)
chr7 (546-598)||(22155291-22155343)
chr7 (546-598)||(22211206-22211258)
chr7 (25-105)||(29995413-29995493)
chr7 (541-598)||(77448-77505)
chr7 (541-598)||(20479111-20479168)
chr7 (541-584)||(37114529-37114572)
chr7 (541-598)||(47384883-47384940)
chr7 (544-598)||(35692029-35692083)
[»] chr8 (44 HSPs)
chr8 (541-668)||(41041311-41041438)
chr8 (541-670)||(40338399-40338528)
chr8 (19-120)||(22273394-22273495)
chr8 (19-118)||(26239204-26239303)
chr8 (19-116)||(13485008-13485105)
chr8 (19-120)||(41041206-41041307)
chr8 (19-120)||(42942921-42943021)
chr8 (21-118)||(41824436-41824533)
chr8 (597-670)||(41824644-41824717)
chr8 (605-670)||(7744112-7744177)
chr8 (25-118)||(8608739-8608832)
chr8 (25-118)||(13107305-13107398)
chr8 (25-118)||(13283490-13283583)
chr8 (609-670)||(9672095-9672156)
chr8 (597-670)||(26239415-26239488)
chr8 (25-118)||(27404721-27404814)
chr8 (25-118)||(29238648-29238741)
chr8 (25-118)||(38548326-38548419)
chr8 (19-119)||(40338301-40338394)
chr8 (597-669)||(15307562-15307634)
chr8 (597-669)||(15487931-15488003)
chr8 (597-669)||(27404926-27404998)
chr8 (597-669)||(29238464-29238536)
chr8 (32-114)||(29693830-29693910)
chr8 (25-118)||(15307746-15307839)
chr8 (25-118)||(15488115-15488208)
chr8 (541-598)||(26239309-26239366)
chr8 (31-107)||(11719933-11720009)
chr8 (25-105)||(27692313-27692393)
chr8 (25-105)||(33707707-33707787)
chr8 (541-584)||(42942874-42942917)
chr8 (541-598)||(13107404-13107461)
chr8 (541-598)||(15307683-15307740)
chr8 (541-598)||(15488052-15488109)
chr8 (541-598)||(27404820-27404877)
chr8 (541-598)||(38548263-38548320)
chr8 (541-598)||(41824539-41824595)
chr8 (541-593)||(22273338-22273390)
chr8 (541-598)||(13283427-13283484)
chr8 (541-591)||(7743998-7744048)
chr8 (597-647)||(11720132-11720182)
chr8 (597-654)||(13107510-13107567)
chr8 (597-654)||(13283321-13283378)
chr8 (597-654)||(38548157-38548214)
[»] chr5 (42 HSPs)
chr5 (541-670)||(34328192-34328321)
chr5 (19-120)||(34328325-34328426)
chr5 (541-669)||(18624044-18624169)
chr5 (19-120)||(8540796-8540897)
chr5 (19-120)||(32134730-32134831)
chr5 (19-116)||(30464436-30464533)
chr5 (19-119)||(12801020-12801120)
chr5 (587-670)||(28821663-28821746)
chr5 (19-119)||(12738197-12738297)
chr5 (25-118)||(7268950-7269043)
chr5 (25-118)||(17575389-17575482)
chr5 (25-118)||(17577420-17577513)
chr5 (19-115)||(18623939-18624035)
chr5 (53-120)||(2181223-2181290)
chr5 (25-118)||(40781683-40781776)
chr5 (597-669)||(17575206-17575278)
chr5 (597-669)||(17575926-17575998)
chr5 (597-669)||(17577237-17577309)
chr5 (597-669)||(42472265-42472337)
chr5 (19-114)||(41494328-41494423)
chr5 (25-118)||(17576109-17576202)
chr5 (597-670)||(2181040-2181113)
chr5 (541-598)||(2181162-2181219)
chr5 (25-118)||(29620679-29620772)
chr5 (25-118)||(42472060-42472153)
chr5 (25-118)||(21842456-21842546)
chr5 (35-106)||(27076996-27077067)
chr5 (597-666)||(21842275-21842344)
chr5 (541-598)||(21842393-21842450)
chr5 (541-598)||(42472159-42472216)
chr5 (541-598)||(17575326-17575383)
chr5 (541-598)||(17576046-17576103)
chr5 (541-598)||(17577357-17577414)
chr5 (541-598)||(29620778-29620835)
chr5 (541-598)||(30464541-30464598)
chr5 (541-582)||(40781636-40781677)
chr5 (545-598)||(41494437-41494490)
chr5 (29-105)||(2853169-2853245)
chr5 (25-81)||(24540298-24540354)
chr5 (545-584)||(18341571-18341610)
chr5 (541-591)||(32134835-32134885)
chr5 (597-654)||(7268782-7268839)
[»] chr4 (32 HSPs)
chr4 (541-670)||(11254657-11254786)
chr4 (541-670)||(41760326-41760455)
chr4 (541-668)||(42981866-42981993)
chr4 (19-120)||(35402242-35402343)
chr4 (19-120)||(42981997-42982098)
chr4 (19-118)||(54387398-54387497)
chr4 (19-120)||(11254552-11254653)
chr4 (19-113)||(2691858-2691952)
chr4 (19-120)||(41760221-41760322)
chr4 (25-118)||(51013381-51013474)
chr4 (598-670)||(48645721-48645793)
chr4 (25-118)||(833734-833827)
chr4 (25-118)||(5439132-5439225)
chr4 (541-598)||(54387335-54387392)
chr4 (25-105)||(43520585-43520665)
chr4 (605-669)||(51013197-51013261)
chr4 (597-656)||(35402453-35402512)
chr4 (624-670)||(54387219-54387265)
chr4 (597-670)||(11641358-11641431)
chr4 (541-594)||(48645607-48645660)
chr4 (541-598)||(833833-833890)
chr4 (597-669)||(833939-834014)
chr4 (541-598)||(5439069-5439126)
chr4 (541-598)||(51013318-51013375)
chr4 (605-665)||(2692076-2692136)
chr4 (542-598)||(35402348-35402404)
chr4 (61-114)||(11641550-11641603)
chr4 (19-52)||(49524322-49524355)
chr4 (546-598)||(11641480-11641532)
chr4 (545-591)||(2691966-2692012)
chr4 (597-669)||(5438945-5439020)
chr4 (550-598)||(10544447-10544495)
[»] chr2 (27 HSPs)
chr2 (541-670)||(6798794-6798923)
chr2 (541-662)||(17697503-17697624)
chr2 (541-670)||(42518156-42518283)
chr2 (541-670)||(2768202-2768331)
chr2 (541-670)||(34400909-34401038)
chr2 (19-120)||(42518051-42518152)
chr2 (19-120)||(2768335-2768436)
chr2 (19-120)||(34400804-34400905)
chr2 (19-119)||(19907211-19907311)
chr2 (19-120)||(6798927-6799028)
chr2 (19-120)||(17697628-17697729)
chr2 (19-120)||(39663636-39663737)
chr2 (597-669)||(39663847-39663919)
chr2 (597-670)||(44708604-44708677)
chr2 (25-118)||(40561373-40561466)
chr2 (597-670)||(19581872-19581945)
chr2 (597-669)||(6784070-6784142)
chr2 (25-118)||(6783865-6783958)
chr2 (25-118)||(24206110-24206203)
chr2 (25-118)||(37021641-37021734)
chr2 (597-669)||(24206313-24206385)
chr2 (541-598)||(39663741-39663798)
chr2 (538-598)||(37021578-37021638)
chr2 (541-584)||(40561324-40561367)
chr2 (541-598)||(6783964-6784021)
chr2 (541-598)||(19581766-19581823)
chr2 (31-86)||(26581474-26581526)
[»] chr1 (43 HSPs)
chr1 (541-670)||(37087498-37087627)
chr1 (19-120)||(37087631-37087732)
chr1 (19-117)||(50554674-50554772)
chr1 (541-670)||(15105715-15105841)
chr1 (19-116)||(31237313-31237410)
chr1 (19-120)||(51895061-51895162)
chr1 (19-118)||(52642398-52642497)
chr1 (19-115)||(15105850-15105946)
chr1 (19-120)||(3012349-3012450)
chr1 (597-670)||(50554885-50554958)
chr1 (19-114)||(6817373-6817468)
chr1 (25-118)||(4854898-4854991)
chr1 (597-670)||(52642609-52642682)
chr1 (605-670)||(6817591-6817656)
chr1 (25-118)||(33599720-33599813)
chr1 (25-118)||(1443653-1443746)
chr1 (541-598)||(50554779-50554836)
chr1 (597-669)||(33599925-33599997)
chr1 (25-105)||(46582485-46582565)
chr1 (541-598)||(6817477-6817534)
chr1 (25-118)||(9120580-9120673)
chr1 (597-666)||(26224327-26224396)
chr1 (597-662)||(27088563-27088628)
chr1 (25-118)||(27088740-27088833)
chr1 (25-118)||(47011980-47012073)
chr1 (32-118)||(34777077-34777162)
chr1 (25-118)||(26224122-26224215)
chr1 (541-598)||(31237418-31237475)
chr1 (541-596)||(51895166-51895221)
chr1 (541-598)||(1443590-1443647)
chr1 (541-598)||(9120679-9120736)
chr1 (541-598)||(33599819-33599876)
chr1 (541-598)||(52642503-52642560)
chr1 (541-584)||(3012454-3012497)
chr1 (541-584)||(26224221-26224264)
chr1 (19-56)||(2870635-2870672)
chr1 (541-598)||(4854997-4855054)
chr1 (541-582)||(34777168-34777209)
chr1 (541-598)||(47012079-47012136)
chr1 (19-48)||(25277268-25277297)
chr1 (541-582)||(27088693-27088734)
chr1 (597-654)||(34777274-34777331)
chr1 (19-48)||(45045404-45045433)
[»] chr3 (45 HSPs)
chr3 (544-670)||(44274947-44275073)
chr3 (541-670)||(46199008-46199137)
chr3 (541-670)||(21349983-21350112)
chr3 (547-670)||(43766410-43766533)
chr3 (546-670)||(30598940-30599063)
chr3 (20-116)||(21350120-21350216)
chr3 (21-120)||(30598833-30598932)
chr3 (19-120)||(23292065-23292166)
chr3 (19-120)||(27897686-27897787)
chr3 (19-118)||(42281996-42282095)
chr3 (20-118)||(51685874-51685972)
chr3 (19-120)||(2378435-2378536)
chr3 (19-120)||(43766543-43766644)
chr3 (25-118)||(41978847-41978940)
chr3 (31-114)||(24846074-24846157)
chr3 (599-670)||(27897899-27897970)
chr3 (27-118)||(53188279-53188370)
chr3 (597-670)||(51685689-51685762)
chr3 (54-120)||(44274874-44274940)
chr3 (25-118)||(35904326-35904419)
chr3 (605-670)||(42281811-42281876)
chr3 (597-669)||(53188482-53188554)
chr3 (624-670)||(2378278-2378324)
chr3 (541-598)||(2378374-2378431)
chr3 (541-598)||(27897791-27897848)
chr3 (541-598)||(51685811-51685868)
chr3 (597-669)||(35904531-35904603)
chr3 (25-105)||(44795366-44795446)
chr3 (25-114)||(7883829-7883915)
chr3 (541-594)||(42281937-42281990)
chr3 (542-598)||(48829711-48829767)
chr3 (631-670)||(48829831-48829870)
chr3 (541-598)||(7883925-7883982)
chr3 (541-598)||(35904425-35904482)
chr3 (541-598)||(41978784-41978841)
chr3 (541-598)||(53188376-53188433)
chr3 (25-105)||(2661381-2661461)
chr3 (544-596)||(23292173-23292225)
chr3 (545-596)||(24846009-24846060)
chr3 (541-584)||(1847132-1847175)
chr3 (552-598)||(35862131-35862177)
chr3 (597-670)||(13466474-13466547)
chr3 (31-108)||(13466639-13466716)
chr3 (597-634)||(24845922-24845959)
chr3 (597-654)||(41978678-41978735)
[»] chr6 (29 HSPs)
chr6 (541-670)||(7371710-7371839)
chr6 (541-670)||(20524696-20524825)
chr6 (19-120)||(20524829-20524930)
chr6 (19-118)||(6902413-6902512)
chr6 (19-120)||(11356647-11356748)
chr6 (19-120)||(7371605-7371706)
chr6 (19-118)||(9399572-9399671)
chr6 (19-118)||(33267514-33267618)
chr6 (604-670)||(6902228-6902294)
chr6 (604-670)||(11356464-11356530)
chr6 (597-670)||(7050837-7050910)
chr6 (597-670)||(9399387-9399460)
chr6 (597-670)||(10569478-10569551)
chr6 (541-598)||(7050959-7051016)
chr6 (25-118)||(32454789-32454882)
chr6 (25-118)||(32437662-32437752)
chr6 (25-90)||(13611181-13611246)
chr6 (597-666)||(32437864-32437933)
chr6 (541-598)||(33267624-33267681)
chr6 (541-598)||(6902350-6902407)
chr6 (541-594)||(9399513-9399566)
chr6 (543-598)||(10569599-10569654)
chr6 (60-118)||(18644675-18644733)
chr6 (541-598)||(11356586-11356643)
chr6 (597-662)||(18644558-18644623)
chr6 (597-643)||(33267730-33267776)
chr6 (541-582)||(32454888-32454929)
chr6 (34-90)||(14338165-14338221)
chr6 (544-598)||(32437761-32437815)
[»] scaffold0345 (3 HSPs)
scaffold0345 (19-120)||(1008-1109)
scaffold0345 (604-670)||(825-891)
scaffold0345 (541-598)||(947-1004)
[»] scaffold0004 (3 HSPs)
scaffold0004 (604-670)||(107376-107442)
scaffold0004 (19-118)||(107158-107257)
scaffold0004 (541-598)||(107263-107320)


Alignment Details
Target: chr7 (Bit Score: 376; Significance: 0; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 376; E-Value: 0
Query Start/End: Original strand, 121 - 536
Target Start/End: Original strand, 41353852 - 41354267
Alignment:
Q  121 atttgccgaaattcattatgttatgatgttatcatgaagttaaagctgatccatgtcttatgttatcatgaagtttataattatctcaatgttgagattt 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  41353852 atttgccgaaattcattatgttatgatgttatcatgaagttaaagctgaatcatgtcttatgttatcatgaagtttataattatctcaatgttgagattt 41353951  T
Q  221 gagaaattcagccacctaggcatctatacctcacttatatcttgagtcaagcctaatctggcagcttttctttgctctggtgtgaagcatgtctttctga 320  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41353952 gagaaattcagccacctaggtatctatacctcacttaaatcttgagtcaagcctaatctggcagcttttctttgctctggtgtgaagcatgtctttctga 41354051  T
Q  321 ttagtgaaaatcaccgaaaacaatccattgaatctaatttcgtgaggaattttactacttaagaggtctgatgacttgggtcttttgaagtaattttgtc 420  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  41354052 ttagtgaaaatcaccgaaaacaatccagtgaatctaatttcgtgaggaattttactacttaagaggtctgatgacttggatcttttgaagtaattttgtc 41354151  T
Q  421 tgatatatgaaagttgttggctgattggtcagcaacatatgtttctgatagtcccagtcctacttattcatcatcaaaacctaaaatacttgtcaattag 520  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||||| |||||||||||||||||||    
T  41354152 tgatatatgaaagttgttggctggttggtcagcaacatatgtttctgatagtcccagttctacttatacatcatcaaaacttaaaatacttgtcaattag 41354251  T
Q  521 ctgccgaaggtgtgca 536  Q
    ||||||||||||||||    
T  41354252 ctgccgaaggtgtgca 41354267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 38472851 - 38472980
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||| | ||||    
T  38472851 gagagcttcaatgttggtgtcttagaatttgtgttgtaagaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaacaatact 38472950  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  38472951 gattttgtcttttgattgtataggatgatg 38472980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 46438235 - 46438364
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46438235 gagagcttcaatgttggtgtcctataatttgtgttgtaaaaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtact 46438334  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    || ||||||||||||||| || ||||||||    
T  46438335 gaatttgtcttttgattgcattggatgatg 46438364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 541 - 668
Target Start/End: Original strand, 24227147 - 24227274
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||||  ||||||||||||||||||||||||||||||| ||||    
T  24227147 gagagcttcaatgttagtgtcctagaatttgtgttgtaagaaaagccaacactgttaacaatgattatgtgatgtgtgaatgatttgtttaaatattact 24227246  T
Q  641 gattttgtcttttgattgtataggatga 668  Q
    ||||||||||||||||||||||||||||    
T  24227247 gattttgtcttttgattgtataggatga 24227274  T

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Target: chr7; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 37114424 - 37114525
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||| |||||||| ||||||||||||||||||    
T  37114424 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaatagtgagtcttcatcttcaaactctatgtacaatgatga 37114523  T
Q  119 gg 120  Q
    ||    
T  37114524 gg 37114525  T

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Target: chr7; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 13169259 - 13169159
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  13169259 tgttgaatattcggtgttcagaaatgatgagtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 13169160  T
Q  119 g 119  Q
    |    
T  13169159 g 13169159  T

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Target: chr7; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 46438130 - 46438231
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||    
T  46438130 tgttgaagattcggtgttcataaatgatgggtggtgggcgtatgggcaaaaagaactacaacagtcgctcttcatcttcaagctctatgtacaatgatga 46438229  T
Q  119 gg 120  Q
    ||    
T  46438230 gg 46438231  T

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Target: chr7; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 22155452 - 22155352
Alignment:
Q  20 gttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatgag 119  Q
    ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22155452 gttgaagattcggtgttcaaaaatgatgggtggtggacgtctgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatgag 22155353  T
Q  120 g 120  Q
    |    
T  22155352 g 22155352  T

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Target: chr7; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 20 - 120
Target Start/End: Complemental strand, 22211367 - 22211267
Alignment:
Q  20 gttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatgag 119  Q
    ||||||||||||||||||| ||||||||| |||||| | | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  22211367 gttgaagattcggtgttcaaaaatgatgggtggtggacgtctgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatgag 22211268  T
Q  120 g 120  Q
    |    
T  22211267 g 22211267  T

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Target: chr7; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 38472746 - 38472846
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  38472746 tgttgaagattcggtgttcacaaatgatgggtggtgggcgtatggacaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaattatga 38472845  T
Q  119 g 119  Q
    |    
T  38472846 g 38472846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 39858174 - 39858274
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  39858174 tgttgaatattcggtgttcagaaatgatgagtggtgggcgtatgggcaaaaacaacttcaacagtcggtcttcatcttcaagctctatgtacaatgatga 39858273  T
Q  119 g 119  Q
    |    
T  39858274 g 39858274  T

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Target: chr7; HSP #12
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 114
Target Start/End: Complemental strand, 6604992 - 6604897
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    ||||||||||||||||||| |||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6604992 tgttgaagattcggtgttcggaaatgatgggtggtgggtgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatg 6604897  T

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Target: chr7; HSP #13
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 48851042 - 48851141
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||||||||||||||||| |||||||||||||||| ||||||||||    
T  48851042 tgttgaagattcggtgttcagaaatgatgggtggtggacgtatgggcaaaaacagctacaacagtcggtcttcatcttcaagctctatgcacaatgatga 48851141  T

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Target: chr7; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 35691927 - 35692020
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  35691927 agattcggtgttcataattgatgggtggtgggcatatgggcaaaaacaactacaacagccggtcttcatcttcaagctctatgtacaatgatga 35692020  T

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Target: chr7; HSP #15
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 34775534 - 34775635
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||  ||||||   |||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  34775534 tgttgaagattcggtgttcagaaatgatgagtggtggaagtatgggaaaaaacaactacaacagtaggtcttcatcttcaagctctatgtacaatgatga 34775633  T
Q  119 gg 120  Q
    ||    
T  34775634 gg 34775635  T

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Target: chr7; HSP #16
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 38550017 - 38550115
Alignment:
Q  21 ttgaagattcggtgttcagaaatgatggatggtgggcatatggg-caaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||| |||||||||||||||||| |||||||| |||||| |||||||| ||| ||||||||||||| |||||||||||||||||||||||||||    
T  38550017 ttgaagatttggtgttcagaaatgatgggtggtgggcgtatggggcaaaaacagctataacagtcggtctttatcttcaagctctatgtacaatgatga 38550115  T

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Target: chr7; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 45360889 - 45360788
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||| ||||||||  |||||| | ||||||||||||||||||||| ||| |||| | |||||||||||||||||||||||||||    
T  45360889 tgttgaagattcagtgttcataaatgatgagtggtggacgtatgggcaaaaacaactacaatagtaggtcctcatcttcaagctctatgtacaatgatga 45360790  T
Q  119 gg 120  Q
    ||    
T  45360789 gg 45360788  T

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Target: chr7; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 48851253 - 48851326
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  48851253 aacaatggttatgtgatgtgtgaatggtttgtttaaatagtactgattttgtcttttgattgtataagatgatg 48851326  T

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Target: chr7; HSP #19
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 77604 - 77511
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  77604 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 77511  T

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Target: chr7; HSP #20
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 22155242 - 22155169
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  22155242 aacaatggttatgtgatgtgtgaatggtttgtttaaatagtactgaatttgtcctttgattgtataggatgatg 22155169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 22211157 - 22211084
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||    
T  22211157 aacaatggttatgtgatgtgtgaatggtttgtttaaatagtactgaatttgtcctttgattgtataggatgatg 22211084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 38550227 - 38550300
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  38550227 aacaatggttatgtgatgtgtgaatggtttgttaaaatagtactgattttgtcttttgattttataggatgatg 38550300  T

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Target: chr7; HSP #23
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 45360678 - 45360605
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  45360678 aacaatggttatgtgatgtgcgaatggtctgtttaaatagtactgattttgtcttttgattgtataggatgatg 45360605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 47384778 - 47384877
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||||||||||||| |||||| | |||||| ||||||| ||||||||| | ||||| ||||||||||||| ||| |||||||||    
T  47384778 tgttgaagatttggtgttcagaaatgatgggtggtggacgtatgggaaaaaacagctacaacagacagtcttcatcttcaagctctctgttcaatgatga 47384877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 6604782 - 6604709
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||  ||||||||||||||||| ||||| |||||||||||||||||||||||    
T  6604782 aacaatggttatgtgatgtgtgaatagtttgtttaaatagtacttattttatcttttgattgtataggatgatg 6604709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 24227048 - 24227142
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||||||  |||| |  |||||      ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24227048 tgttgaagattcggtgttcagaaatgatgggaggtgtgtgtatgg------acaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 24227141  T

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Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 666
Target Start/End: Original strand, 47384989 - 47385058
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggat 666  Q
    |||||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||    
T  47384989 aacaatggttatgtgatgtgtgaatggtttgtttaaatggtactgattttgtcttttgattgtacaggat 47385058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 34775745 - 34775818
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||| ||||||| ||||| ||||||||||||||| ||||||||||||||| |||||||||||||||    
T  34775745 aacaatggttatatgatgtgcgaatggtttgtttaaatagtattgattttgtcttttggttgtataggatgatg 34775818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 45360784 - 45360727
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  45360784 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagtcaacactgtcaa 45360727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 27664943 - 27665023
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||| ||||||||||||||||||||||  |||| || ||||||||||||||    
T  27664943 agattcggtgttcagaattgatgggtggtgcgcaaatgggcaaaaacaactacaacaaccggtattcatcttcaagctcta 27665023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 20479267 - 20479174
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| ||||||  |||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  20479267 agattcagtgtttagaattgatgggcggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 20479174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 38550121 - 38550178
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  38550121 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 38550178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 77399 - 77327
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| | |||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  77399 aacaatggttatttaatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 77327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 35692132 - 35692204
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||||||||||||||||| ||| |||||||  || ||||||||||||||||||||||| ||||||    
T  35692132 aacaatggttatgtgatgtgtgaatgttttctttaaattatattgattttgtcttttgattgtataagatgat 35692204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 590
Target Start/End: Complemental strand, 6604888 - 6604839
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaac 590  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  6604888 gagagcttcaatgttggtgtcctagaatttatgttgtaagaaaagtcaac 6604839  T

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Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 34775639 - 34775696
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||| |||| ||||| |||||||||||||||||||| ||||||    
T  34775639 gagagcttcaatgttggtggcctagaatttgtgttgtaagaaaagtcaacagtgtcaa 34775696  T

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Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 48851147 - 48851204
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||    
T  48851147 gagagcttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaacactgtcaa 48851204  T

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Target: chr7; HSP #38
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 22155343 - 22155291
Alignment:
Q  546 cttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  22155343 cttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 22155291  T

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Target: chr7; HSP #39
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 22211258 - 22211206
Alignment:
Q  546 cttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  22211258 cttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 22211206  T

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Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 29995413 - 29995493
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||  ||||| ||||||||||||||||  |||| || ||||||||||||||    
T  29995413 agattcggtgttcagaattgatgggtggtgcgcgaatgggaaaaaacaactacaacaaccggtattcatcttcaagctcta 29995493  T

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Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 77505 - 77448
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  77505 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 77448  T

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Target: chr7; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 20479168 - 20479111
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  20479168 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 20479111  T

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Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 37114529 - 37114572
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  37114529 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaa 37114572  T

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Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 47384883 - 47384940
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||  ||||| ||||||    
T  47384883 gagagattcaatgttggtgtcctagaatttgtgttgtaagaaaaaccaacattgtcaa 47384940  T

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Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 598
Target Start/End: Original strand, 35692029 - 35692083
Alignment:
Q  544 agcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||| | |||||  |||||||||||||  |||||||||||    
T  35692029 agcttcaatgttggtgtccaagaatttgcgttgtaagaaaagcaaacactgtcaa 35692083  T

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Target: chr8 (Bit Score: 112; Significance: 3e-56; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 541 - 668
Target Start/End: Original strand, 41041311 - 41041438
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41041311 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtact 41041410  T
Q  641 gattttgtcttttgattgtataggatga 668  Q
    ||||||||||||||||||||||||||||    
T  41041411 gattttgtcttttgattgtataggatga 41041438  T

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Target: chr8; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 40338399 - 40338528
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||||    
T  40338399 gagagtttcaatgttggtgtcctagaatttgtgttgtaagaaaagtcaacactgtcaacaatgattatgtgatgcgtgaatgatttgtttaaatagtact 40338498  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  40338499 gattttgtcttttgattgtataggatgatg 40338528  T

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Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 22273495 - 22273394
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||| ||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22273495 tgttgaagattcggtgttcagaaatggtgggtggtgggcggatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 22273396  T
Q  119 gg 120  Q
    ||    
T  22273395 gg 22273394  T

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Target: chr8; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 26239204 - 26239303
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  26239204 tgttgaagatttggtgttcagaaatgatgggtggtgggcgtatgggcaaaaacagctacaacagtcggtcttcatcttcaagctctatgtacaatgatga 26239303  T

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Target: chr8; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 13485008 - 13485105
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgat 116  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  13485008 tgttgaagattcggtgttcagaaatgatgggtggtgggcgtatgggcaaaaacaactacaacagtcagtcttcatcttcaagctctacgtacaatgat 13485105  T

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Target: chr8; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 41041206 - 41041307
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||| ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  41041206 tgttgaagattcgttgttcagaaatgacgggtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctttatgtacaatgatga 41041305  T
Q  119 gg 120  Q
    ||    
T  41041306 gg 41041307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 42943021 - 42942921
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||| ||||||| ||||||| ||||||||| |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  42943021 tgttaaagattcagtgttcaaaaatgatgg-tggtgggcgtatgtgcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaataatga 42942923  T
Q  119 gg 120  Q
    ||    
T  42942922 gg 42942921  T

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Target: chr8; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 21 - 118
Target Start/End: Original strand, 41824436 - 41824533
Alignment:
Q  21 ttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||| | |||||| ||||||||| ||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| |||||||||||    
T  41824436 ttgaagatttgatgttcataaatgatgggtggtgagcatatgggcaaaaacagctacagcagtcggtcttcatcttcaagctctatctacaatgatga 41824533  T

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Target: chr8; HSP #9
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 41824644 - 41824717
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  41824644 aacaatggttatgtgatgtgtgaatggtttgttaaaatagtactgattttgtcttttgattgtataggatgatg 41824717  T

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Target: chr8; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 605 - 670
Target Start/End: Original strand, 7744112 - 7744177
Alignment:
Q  605 ttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  7744112 ttatgtgatgtgtgaatgatttgttaaaataatactgattttgtcttttgattgtataggatgatg 7744177  T

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Target: chr8; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 8608739 - 8608832
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  8608739 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 8608832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 13107305 - 13107398
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  13107305 agattcggtgttcagaattgatgggtggtgtgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 13107398  T

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Target: chr8; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 13283583 - 13283490
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  13283583 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 13283490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 609 - 670
Target Start/End: Original strand, 9672095 - 9672156
Alignment:
Q  609 gtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||    
T  9672095 gtgatgtgtgaatggtttgtttaaatagtactgattttgtcttttgattgtataagatgatg 9672156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 26239415 - 26239488
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||||    
T  26239415 aacaatggttatgtgatgtgtgaatggtttgttaaagtaatactgattttgtcttttgattgtataggatgatg 26239488  T

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Target: chr8; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 27404721 - 27404814
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  27404721 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 27404814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 29238741 - 29238648
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  29238741 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 29238648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 38548419 - 38548326
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||| || |||||| ||||| ||  ||||||||||||||||||||||   ||| || |||||||||||||||||||||||||||    
T  38548419 agattcggtgttcataattgatgggtggtgcgcgaatgggcaaaaacaactacaacaactggtattcatcttcaagctctatgtacaatgatga 38548326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 40338301 - 40338394
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| ||||||||||| |||||| |||||||| |||||      ||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  40338301 tgttgaagatttggtgttcagaa-tgatgggtggtgggcgtatgg------acaactacaacagtcagtcttcatcttcaagctctatgtacaatgatga 40338393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 15307634 - 15307562
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  15307634 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 15307562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 15488003 - 15487931
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  15488003 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 15487931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 27404926 - 27404998
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  27404926 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 27404998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 29238536 - 29238464
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  29238536 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 29238464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 29693910 - 29693830
Alignment:
Q  32 gtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    ||||||||||||||||| |||||| | |||||| ||||||| ||||||||||| ||||| |||||||||||||||||||||||    
T  29693910 gtgttcagaaatgatgg-tggtggacgtatggg-aaaaacagctacaacagtcagtcttcatcttcaagctctatgtacaatg 29693830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 15307839 - 15307746
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| | |||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  15307839 agattcagtgtttagaattcatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 15307746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 15488208 - 15488115
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| | |||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  15488208 agattcagtgtttagaattcatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 15488115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 26239309 - 26239366
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  26239309 gagagcttcaatgttggtgtcctagaatttgtgtagtaagaaaagccaacactgtcaa 26239366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 11719933 - 11720009
Alignment:
Q  31 ggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatg 107  Q
    |||||||||||||||||| |||||||| |||||| |||| || ||| || |||| ||||| ||||||||||||||||    
T  11719933 ggtgttcagaaatgatgggtggtgggcgtatgggtaaaatcagctataatagtctgtcttcatcttcaagctctatg 11720009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 27692393 - 27692313
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||  ||| ||||||||||||||||||  |||| || ||||||||||||||    
T  27692393 agattcggtgttcagaattgatgggtggtgcgcgaatgagcaaaaacaactacaacaaccggtattcatcttcaagctcta 27692313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 33707707 - 33707787
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  | || || ||||||||||||||    
T  33707707 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccagtattcatcttcaagctcta 33707787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 584
Target Start/End: Complemental strand, 42942917 - 42942874
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  42942917 gagagcttcaatgttggtgtcctataatttgtgttgtaagaaaa 42942874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 13107404 - 13107461
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  13107404 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 13107461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 15307740 - 15307683
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  15307740 gagagcttcaatgttggtgtcctagaatttatgttgtaagaagagcaaacactgtcaa 15307683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 15488109 - 15488052
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  15488109 gagagcttcaatgttggtgtcctagaatttatgttgtaagaagagcaaacactgtcaa 15488052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 27404820 - 27404877
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  27404820 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 27404877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 38548320 - 38548263
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  38548320 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaatagcaaacactgtcaa 38548263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 41824539 - 41824595
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||||| |||||||||||    
T  41824539 gagagtttcaatgttggtgtcctaaaatttgtgttgtaagaaaagt-aacactgtcaa 41824595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 541 - 593
Target Start/End: Complemental strand, 22273390 - 22273338
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacact 593  Q
    |||||||||||||||||||||||| ||||| |||||||||||||  |||||||    
T  22273390 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaaaccaacact 22273338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 13283484 - 13283427
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |   |||||||||||    
T  13283484 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacaacaaacactgtcaa 13283427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 7743998 - 7744048
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaaca 591  Q
    |||||||||| |||||||||| || ||||| |||||||||||||| |||||    
T  7743998 gagagcttcattgttggtgtcttagaatttgtgttgtaagaaaagccaaca 7744048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 597 - 647
Target Start/End: Original strand, 11720132 - 11720182
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttg 647  Q
    |||||| ||||||||||||||||||| ||||||||| |  |||||||||||    
T  11720132 aacaatggttatgtgatgtgtgaatggtttgtttaagttctactgattttg 11720182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Original strand, 13107510 - 13107567
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  13107510 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 13107567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Complemental strand, 13283378 - 13283321
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  13283378 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 13283321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Complemental strand, 38548214 - 38548157
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  38548214 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 38548157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 4e-55; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 34328321 - 34328192
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  34328321 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaataatact 34328222  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  34328221 gattttgtcttttgattgtataggatgatg 34328192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 34328426 - 34328325
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  34328426 tgttgaagattcggtgttcagaaatgatgggtggtgggcgtatggacaaaaacaactacaacagtcggtcttcatcttcaagctttgtgtacaatgatga 34328327  T
Q  119 gg 120  Q
    ||    
T  34328326 gg 34328325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 541 - 669
Target Start/End: Original strand, 18624044 - 18624169
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa-gtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtac 639  Q
    |||||||||||||||||||||||||||||| ||||||||||||| ||  |     | |||||| ||||||||||||||||||| ||||||||||||||||    
T  18624044 gagagcttcaatgttggtgtcctataatttgtgttgtaagaaaaagtttat----ttaacaatggttatgtgatgtgtgaatggtttgtttaaatagtac 18624139  T
Q  640 tgattttgtcttttgattgtataggatgat 669  Q
    ||||||||||||||||||||||||||||||    
T  18624140 tgattttgtcttttgattgtataggatgat 18624169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 8540897 - 8540796
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||    
T  8540897 tgttgaagattcggtgttcagaaatgatgggcggtgggcgtatgggcaaaaacaactacaacagttagtcttcatcttcaagctttatgtacaatgatga 8540798  T
Q  119 gg 120  Q
    ||    
T  8540797 gg 8540796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 32134730 - 32134831
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||| ||||||||| |||||||| ||||| ||||||||||||||| |||||||||| |||||||||||||| ||||||||||||    
T  32134730 tgttgaagattcggtgttcataaatgatgggtggtgggcgtatggccaaaaacaactacaatagtcggtcttcatcttcaagctctacgtacaatgatga 32134829  T
Q  119 gg 120  Q
    ||    
T  32134830 gg 32134831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 30464436 - 30464533
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgat 116  Q
    |||||||||||||||||||||||||||||| | |||||| |||||||||||| |||||||| |||| ||||| |||||||||||||||||||||||||    
T  30464436 tgttgaagattcggtgttcagaaatgatgggtagtgggcgtatgggcaaaaaaaactacaatagtcagtcttcatcttcaagctctatgtacaatgat 30464533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 12801120 - 12801020
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||||||| ||||||||  ||||||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  12801120 tgttgaatattcggtgttcaaaaatgatgagtggtgggcgcatgggcaaaaacaactacaacagtcggtcttcatcttcaagctatatgtacaatgatga 12801021  T
Q  119 g 119  Q
    |    
T  12801020 g 12801020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 587 - 670
Target Start/End: Complemental strand, 28821746 - 28821663
Alignment:
Q  587 caacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  28821746 caacaatgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtctattgattgcataggatgatg 28821663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 19 - 119
Target Start/End: Complemental strand, 12738297 - 12738197
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||||| | ||||||||  ||||||||  ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  12738297 tgttgaatattcggtgttaaaaaatgatgagtggtgggcgcatgggcaaaaacaactacaacagtcggtcttcatcttcaagctatatgtacaatgatga 12738198  T
Q  119 g 119  Q
    |    
T  12738197 g 12738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 7269043 - 7268950
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  7269043 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 7268950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 17575482 - 17575389
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  17575482 agattcggtgttcagaattgatgggtggtgcgcgaatgagcaaaaacaactacaacaatcggtatttatcttcaagctctatgtacaatgatga 17575389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 17577513 - 17577420
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||| |||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  17577513 agattcggtgttcagaattgatgggtggtgcgcgaatgagcaaaaacaactacaacaatcggtatttatcttcaagctctatgtacaatgatga 17577420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 18623939 - 18624035
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatga 115  Q
    ||||||||||| | |||| ||||||||||| | |||||| ||||||||||||||||||||| |||||||||| |||||||||| ||||||| |||||    
T  18623939 tgttgaagatttgttgtttagaaatgatgggtagtgggcgtatgggcaaaaacaactacaatagtcggtcttcatcttcaagccctatgtataatga 18624035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 53 - 120
Target Start/End: Complemental strand, 2181290 - 2181223
Alignment:
Q  53 tgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatgagg 120  Q
    ||||| |||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  2181290 tgggcgtatgcgcaaaaacaactacaacagtcggtcttcatcttcaagatctatgtacaatgatgagg 2181223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 40781776 - 40781683
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  40781776 agattcagtgtttagaattgatgggtggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 40781683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 17575278 - 17575206
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  17575278 aacaatggttatttgatgtatgaatgatttgtttaaattatactgattttgtcttttgattgtatatgatgat 17575206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 17575998 - 17575926
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  17575998 aacaatggttatttgatgtatgaatgatttgtttaaattatactgattttgtcttttgattgtatatgatgat 17575926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 17577309 - 17577237
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| ||||||||||||||||||  |||||||||||||||||||||||||| ||||||    
T  17577309 aacaatggttatttgatgtatgaatgatttgtttaaattatactgattttgtcttttgattgtatatgatgat 17577237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 42472265 - 42472337
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  42472265 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 42472337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 41494328 - 41494423
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    |||||||||||   |||| ||||||||||| |||||| | |||||| ||||||| |||||||||| |||||| ||||||||| |||||||||||||    
T  41494328 tgttgaagatttaatgtttagaaatgatgggtggtggacgtatgggtaaaaacagctacaacagtgggtcttcatcttcaagttctatgtacaatg 41494423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 17576202 - 17576109
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatggg-caaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||| ||| | ||||||||||||||||| ||||  || |||||||||||||||||||||||||||    
T  17576202 agattcggtgttcagaattgatgggtggtgcgcaaatgagacaaaaacaactacaacaatcggattt-atcttcaagctctatgtacaatgatga 17576109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 2181113 - 2181040
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||  ||||| ||| ||||||||||||||||||||||||||||||| ||| |||||||    
T  2181113 aacaatggttatgtgatgtccgaatggtttatttaaatagtactgattttgtcttttgattgcataagatgatg 2181040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 2181219 - 2181162
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  2181219 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 2181162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 29620679 - 29620772
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| ||||||  |||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  29620679 agattcagtgtttagaattgatgggcggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 29620772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 42472060 - 42472153
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  || | || |||||||||||||||||||||||||||    
T  42472060 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccgttattcatcttcaagctctatgtacaatgatga 42472153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 21842546 - 21842456
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| ||||||   ||| ||  |||||||||||||||| |||||  |||| || |||||||||||||||||||||||||||    
T  21842546 agattcggtgttcagaattgatgg---gtgcgcgaatgggcaaaaacaacttcaacaaccggtattcatcttcaagctctatgtacaatgatga 21842456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 106
Target Start/End: Complemental strand, 27077067 - 27076996
Alignment:
Q  35 ttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctat 106  Q
    |||||||||||||| |||||||| |||| ||||||| ||||| || |||||||||| |||||||||||||||    
T  27077067 ttcagaaatgatgggtggtgggcgtatgtgcaaaaataactataatagtcggtcttcatcttcaagctctat 27076996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 666
Target Start/End: Complemental strand, 21842344 - 21842275
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggat 666  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||| |||||||||||||||||||    
T  21842344 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttatcttttgattgtataggat 21842275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 21842450 - 21842393
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  21842450 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaatagctaacactgtcaa 21842393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 42472159 - 42472216
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  42472159 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 42472216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 17575383 - 17575326
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||| |||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  17575383 gagagcttccatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 17575326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 17576103 - 17576046
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||| |||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  17576103 gagagcttccatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 17576046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 17577414 - 17577357
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||| |||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  17577414 gagagcttccatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 17577357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 29620778 - 29620835
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||| |||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  29620778 gagagtttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 29620835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 30464541 - 30464598
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||| || |||| ||||| |||||||||| ||| ||||||||||||    
T  30464541 gagagcttcaatgttgctgacctagaatttgtgttgtaagagaagccaacactgtcaa 30464598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 40781677 - 40781636
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaa 582  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  40781677 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaa 40781636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 598
Target Start/End: Original strand, 41494437 - 41494490
Alignment:
Q  545 gcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||| || ||||| |||||||||||||  ||||||||||||    
T  41494437 gcttcaatgttggtgtcatagaatttgtgttgtaagaaaaaccaacactgtcaa 41494490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 29 - 105
Target Start/End: Original strand, 2853169 - 2853245
Alignment:
Q  29 tcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||| |||||| ||||| ||  |||||||||| ||||| |||||  |||| || ||||||||||||||    
T  2853169 tcggtgttcagaattgatgggtggtgcgcgaatgggcaaaatcaactgcaacaaccggtattcatcttcaagctcta 2853245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 25 - 81
Target Start/End: Original strand, 24540298 - 24540354
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaaca 81  Q
    ||||||||||||||||| |||||| |||||  |  ||||||||||||||||||||||    
T  24540298 agattcggtgttcagaattgatgggtggtgcacgaatgggcaaaaacaactacaaca 24540354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 545 - 584
Target Start/End: Complemental strand, 18341610 - 18341571
Alignment:
Q  545 gcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||| ||||||||||||| |||||||||||||||||||||    
T  18341610 gcttgaatgttggtgtcccataatttttgttgtaagaaaa 18341571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 541 - 591
Target Start/End: Original strand, 32134835 - 32134885
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaaca 591  Q
    |||||||||||   |||||||||| ||||| ||||||||||||||||||||    
T  32134835 gagagcttcaacaatggtgtcctagaatttgtgttgtaagaaaagtcaaca 32134885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Complemental strand, 7268839 - 7268782
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  7268839 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 7268782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 110; Significance: 4e-55; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 11254657 - 11254786
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  11254657 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaacaatgattatgtgatgtgtgaatgatttgtttaaatagtact 11254756  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  11254757 gattttgtcttttgattgtataggatgatg 11254786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 4e-55
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 41760326 - 41760455
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||  |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41760326 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaatccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtact 41760425  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  41760426 gattttgtcttttgattgtataggatgatg 41760455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 541 - 668
Target Start/End: Complemental strand, 42981993 - 42981866
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| | ||||||| |||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  42981993 gagagcttcaatgttggtgtcctagaatttgttttgtaaggaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttatttaaatagtact 42981894  T
Q  641 gattttgtcttttgattgtataggatga 668  Q
    ||||||| |||||||||||| |||||||    
T  42981893 gattttgccttttgattgtacaggatga 42981866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 35402242 - 35402343
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  35402242 tgttgaagattcggtgttcagaaatgatgggtggtggacgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagttctatgtacaatgatga 35402341  T
Q  119 gg 120  Q
    ||    
T  35402342 gg 35402343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 42982098 - 42981997
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||| || |||||||| |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42982098 tgttgaagattcggtgttcagaaatgacgggtggtgggcgtatgagcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 42981999  T
Q  119 gg 120  Q
    ||    
T  42981998 gg 42981997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 54387497 - 54387398
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  54387497 tgttgaagatttggtgttcagaaatgatgggtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtataataatga 54387398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 11254552 - 11254653
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||| ||||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||| |||||||||||||||||||    
T  11254552 tgttgaagattcagtgttcaaaaatgatgggtggtgggcgtatgggcagaaacaactacaacagtcggtcttcatcttcaggctctatgtacaatgatga 11254651  T
Q  119 gg 120  Q
    ||    
T  11254652 gg 11254653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 19 - 113
Target Start/End: Original strand, 2691858 - 2691952
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaat 113  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||| |||||||||||||  |||| ||||||||||||||||||||||    
T  2691858 tgttgaagatttggtgttcagaaatgatgggtggtgggcgtatgggcaaaaataactacaacagtccatcttcatcttcaagctctatgtacaat 2691952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 41760221 - 41760322
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||| ||||||||||||||||  ||| | | ||| || ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||    
T  41760221 tgttgaagattcgatgttcagaaatgatgggaggtagacgtataggaaaaaacaactacagcagtcggtcttcatcttcaacctctatgtacaatgatga 41760320  T
Q  119 gg 120  Q
    ||    
T  41760321 gg 41760322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 51013474 - 51013381
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  51013474 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 51013381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 598 - 670
Target Start/End: Original strand, 48645721 - 48645793
Alignment:
Q  598 acaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||| |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  48645721 acaatggttatgcgatgtgtgaatgatttgttaaaatagtactgattttgccttttgattgtataggatgatg 48645793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 833734 - 833827
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  833734 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 833827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 5439225 - 5439132
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  5439225 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 5439132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 54387392 - 54387335
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  54387392 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 54387335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 43520665 - 43520585
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||  |||| ||||||||||||||||| ||||| || ||||||||||||||    
T  43520665 agattcggtgttcagaattgatgggtggtgcgcgaatggtcaaaaacaactacaacaatcggtattcatcttcaagctcta 43520585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 605 - 669
Target Start/End: Complemental strand, 51013261 - 51013197
Alignment:
Q  605 ttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  51013261 ttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 51013197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 597 - 656
Target Start/End: Original strand, 35402453 - 35402512
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgat 656  Q
    |||||| || ||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  35402453 aacaatggtcatgtgatgtgtcaatggtttgtttaaatagtactgattttgtcttttgat 35402512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 624 - 670
Target Start/End: Complemental strand, 54387265 - 54387219
Alignment:
Q  624 tttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  54387265 tttgttaaaatagtactgattttgtcttttgattgtataggatgatg 54387219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 11641431 - 11641358
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| ||| ||||||| ||||||||||||  ||||  |||||||||||||||    
T  11641431 aacaatggttatgtgatgtgtgaatggtttttttaaattgtactgattttgaattttctttgtataggatgatg 11641358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 594
Target Start/End: Original strand, 48645607 - 48645660
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactg 594  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  48645607 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactg 48645660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 833833 - 833890
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  833833 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 833890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 833939 - 834014
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttt---tgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||||||||   |||||||||||||||||    
T  833939 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgatgattgtataggatgat 834014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 5439126 - 5439069
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  5439126 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 5439069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 51013375 - 51013318
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  51013375 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 51013318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 605 - 665
Target Start/End: Original strand, 2692076 - 2692136
Alignment:
Q  605 ttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtatagga 665  Q
    |||||||||||||||||| ||||||||||| ||||||||||||  ||||  ||||||||||    
T  2692076 ttatgtgatgtgtgaatggtttgtttaaattgtactgattttgaattttctttgtatagga 2692136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 35402348 - 35402404
Alignment:
Q  542 agagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||| |||||||||||| | ||||| |||||||||||||||||||||| ||||    
T  35402348 agagcttcgatgttggtgtccaagaatttgtgttgtaagaaaagtcaacactatcaa 35402404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 11641603 - 11641550
Alignment:
Q  61 tgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    ||||||| ||||||||| |||||| |||||  ||||||||||||||||||||||    
T  11641603 tgggcaagaacaactacgacagtcagtcttcttcttcaagctctatgtacaatg 11641550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Complemental strand, 49524355 - 49524322
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatgg 52  Q
    ||||||||||||||||||||||||||||||||||    
T  49524355 tgttgaagattcggtgttcagaaatgatggatgg 49524322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 546 - 598
Target Start/End: Complemental strand, 11641532 - 11641480
Alignment:
Q  546 cttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||| || ||||| |||||||||||||| ||||||| ||||    
T  11641532 cttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaacactatcaa 11641480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 591
Target Start/End: Original strand, 2691966 - 2692012
Alignment:
Q  545 gcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaaca 591  Q
    ||||||||||||||||| || ||||| |||||||||||||| |||||    
T  2691966 gcttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaaca 2692012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 669
Target Start/End: Complemental strand, 5439020 - 5438945
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttt---tgattgtataggatgat 669  Q
    |||||| ||||| |||||| | |||  |||||||||||  ||||||||||||||||   |||||||||||||||||    
T  5439020 aacaatggttatttgatgtataaatattttgtttaaattatactgattttgtcttttgatgattgtataggatgat 5438945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 550 - 598
Target Start/End: Complemental strand, 10544495 - 10544447
Alignment:
Q  550 aatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||| ||||||| ||| |||||||||||||| ||| ||||    
T  10544495 aatgttggtgtcccataatttgtgtggtaagaaaagtcaatactctcaa 10544447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 1e-52; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 6798923 - 6798794
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||    
T  6798923 gagagcttcaatgttggtgtcctaaaatttgtgttgtaagaaaagacaacactatcaacaacggttatgtgatgtgtgaatgatttgtttaaatagtact 6798824  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  6798823 gattttgtcttttgattgtataggatgatg 6798794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 662
Target Start/End: Complemental strand, 17697624 - 17697503
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17697624 gagagcttcaatgttggtgtcctagaatttgtgttgtcagaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtact 17697525  T
Q  641 gattttgtcttttgattgtata 662  Q
    ||||||||||||||||||||||    
T  17697524 gattttgtcttttgattgtata 17697503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 42518156 - 42518283
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  42518156 gagagctttaatgttggtgtcctaaaatttttgttgtaagaaaagccaacactgtcaacaatggttatgtgatgcgtgaatgatttgtttaaatagtact 42518255  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||  ||||||||||||||||||||||||||    
T  42518256 ga--ttgtcttttgattgtataggatgatg 42518283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 2768331 - 2768202
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  2768331 gagagcttcaatgttggtgtcctagaatttgtgttgtaaaaaaagccaacactatcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtact 2768232  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    | ||||||||||||||| ||||||||||||    
T  2768231 ggttttgtcttttgattatataggatgatg 2768202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 34400909 - 34401038
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||||||||||||||||||| || ||||  |||| ||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||     
T  34400909 gagagcttcaatgttggtgtcttagaattcgtgttttaagaaaagccaacactgtcaacaatagttatgtgatgtgtgaataatttgtttaaatagtaca 34401008  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
     |||||||||||||||||||||||||||||    
T  34401009 tattttgtcttttgattgtataggatgatg 34401038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 42518051 - 42518152
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  42518051 tgttgaagatttggtgttcaaaaatgatgggtggtgggcatatgggcaaaaacaactacaacagtcggccttcatcttcaagctctatgtacaatgatga 42518150  T
Q  119 gg 120  Q
    ||    
T  42518151 gg 42518152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 2768436 - 2768335
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||||||||||||  |||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2768436 tgttgaagattcagtgttcagaaatgatgagtggtggacgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 2768337  T
Q  119 gg 120  Q
    ||    
T  2768336 gg 2768335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 34400804 - 34400905
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||||||||||||| ||||| || ||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34400804 tgttgaagattcagtgttcagaaatgatgggtggtgagcgtataggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 34400903  T
Q  119 gg 120  Q
    ||    
T  34400904 gg 34400905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 19907211 - 19907311
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||||||||||||||||  |||||||| ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  19907211 tgttgaatattcggtgttcagaaatgatgagtggtgggcgtatgggcaaaaacaacttcaacagtcggtcttcatcttcaagctctatgtacaatgatga 19907310  T
Q  119 g 119  Q
    |    
T  19907311 g 19907311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 6799028 - 6798927
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||| ||||| ||||||| |||||||||||||    
T  6799028 tgttgaagattcagtgttcagaaatgatgggtggtgggcgtatgggcaaaaacaattacaacagtcggtcttcatctttaagctctgtgtacaatgatga 6798929  T
Q  119 gg 120  Q
    ||    
T  6798928 gg 6798927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 17697729 - 17697628
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||| ||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  17697729 tgttcaagattcggtgttcataaatgatgggtggtggacgtatgggcaaaaacaactacaacagtcgatcttcatcttcaagctctatgtacaatgatga 17697630  T
Q  119 gg 120  Q
    ||    
T  17697629 gg 17697628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 39663636 - 39663737
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| |||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  39663636 tgttgaaaattcggtgctcagaaatgatgagtggtgggcgtatgggcaaaaacaactacaacagtcagtcttcatcttcaagctctatgtacaacgatga 39663735  T
Q  119 gg 120  Q
    ||    
T  39663736 gg 39663737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 39663847 - 39663919
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  39663847 aacaatggttatgtgatgtgcgaatggtttgtttaaatagtactgattttgtcttttgattgtataggatgat 39663919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 44708604 - 44708677
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  44708604 aacaatggttatgtgatgtgtgaatggtttgtttaaatagtacttattttgtcttttgattgtatatgatgatg 44708677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 40561466 - 40561373
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| | |||| ||||| ||  |||||||||||||||||||||| ||||| || |||||| ||||||||||||||||||||    
T  40561466 agattcggtgttcagaatttatgggtggtgcgcgaatgggcaaaaacaactacaacaatcggtattcatcttcgagctctatgtacaatgatga 40561373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 19581872 - 19581945
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| |||||| |||||||||||| |||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  19581872 aacaatggttatgcgatgtgtgaatggtttgttaaaatagtactgattttgtcttttaattgtgtaggatgatg 19581945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 6784070 - 6784142
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  6784070 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 6784142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 6783865 - 6783958
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||   ||| || |||||||||||||||||||||||||||    
T  6783865 agattcagtgtttagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaacaggtattcatcttcaagctctatgtacaatgatga 6783958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 24206110 - 24206203
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||| ||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  24206110 agattcagtgtttagaattgatgggtggtgcgcgaatgggtaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 24206203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 37021734 - 37021641
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| ||||||  |||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  37021734 agattcagtgtttagaattgatgggcggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 37021641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 24206313 - 24206385
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| ||| |||||||  |||||||||||||||||||||||||||||||||    
T  24206313 aacaatggttatttgatgtatgaatgttttatttaaattatactgattttgtcttttgattgtataggatgat 24206385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 39663741 - 39663798
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||| |||||    
T  39663741 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacaccgtcaa 39663798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 538 - 598
Target Start/End: Complemental strand, 37021638 - 37021578
Alignment:
Q  538 tgggagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  37021638 tgggagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 37021578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 584
Target Start/End: Complemental strand, 40561367 - 40561324
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  40561367 gagagcttcaatgttggtgtcctataatttgtgttgtaagaaaa 40561324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 6783964 - 6784021
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  6783964 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 6784021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 19581766 - 19581823
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||| |||||| ||||| | |||||||||||| ||||||||||||    
T  19581766 gagagcttcaatgttggcgtcctagaatttgtattgtaagaaaagccaacactgtcaa 19581823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 86
Target Start/End: Original strand, 26581474 - 26581526
Alignment:
Q  31 ggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcgg 86  Q
    |||||||| ||||||||||||||   |||||||||||||||||||| || ||||||    
T  26581474 ggtgttcataaatgatggatggt---catatgggcaaaaacaactataatagtcgg 26581526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 1e-52; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 37087627 - 37087498
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| | |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  37087627 gagagcttcaatgttggtgtcctagaatttgtattgtaagaaaagccaacactgtcaacaatggttatgtgatgtgtgaatgctttgtttaaatagtact 37087528  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  37087527 gattttgtcttttgattgtataggatgatg 37087498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 37087732 - 37087631
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  37087732 tgttgaagattcggtgttcagaaatgatgggtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctgtgtacaatgatga 37087633  T
Q  119 gg 120  Q
    ||    
T  37087632 gg 37087631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 19 - 117
Target Start/End: Original strand, 50554674 - 50554772
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatg 117  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50554674 tgttgaagattcggtgttcataaatgattagtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatg 50554772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 15105841 - 15105715
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaag-tcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtac 639  Q
    |||||||||||||||||||||||||||||| |||||||||||||| |  |     | |||||| ||||||||||||||||||| ||||||||||||||||    
T  15105841 gagagcttcaatgttggtgtcctataatttgtgttgtaagaaaaggtttat----ttaacaatggttatgtgatgtgtgaatggtttgtttaaatagtac 15105746  T
Q  640 tgattttgtcttttgattgtataggatgatg 670  Q
    ||||||| |||||||||||||||||||||||    
T  15105745 tgattttttcttttgattgtataggatgatg 15105715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 31237313 - 31237410
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgat 116  Q
    |||||||||||||||||||| ||||||||| | |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  31237313 tgttgaagattcggtgttcaaaaatgatgggtagtgggcgtatggacaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgat 31237410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 51895061 - 51895162
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||| ||||||||||| |||||| | |||||||||||||||||||||||||||||||| ||||||||||| ||| |||||||||||    
T  51895061 tgttgaagattcggtgtttagaaatgatgggtggtggacgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctatatatacaatgatga 51895160  T
Q  119 gg 120  Q
    ||    
T  51895161 gg 51895162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 52642398 - 52642497
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| | |||| ||||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  52642398 tgttgaagatttgatgtttagaaatgatgggtggtgggcgtatgggcaaaaacagctacaacagtcggtcttcatcttcaagctctatgtacaatgatga 52642497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 19 - 115
Target Start/End: Complemental strand, 15105946 - 15105850
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatga 115  Q
    ||||||||||| |||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||||| |||||||||| |||||||||||||    
T  15105946 tgttgaagatttggtgtttagaaatgatggatggtggacgtatgggcaaaaacagctacaacagtcggtcttcatcttcaagccctatgtacaatga 15105850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 3012349 - 3012450
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||| |||||||||| ||||||||| || | ||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  3012349 tgttgaagactcggtgttcaaaaatgatgggtgttaggcgtatgggaaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacagtgatga 3012448  T
Q  119 gg 120  Q
    ||    
T  3012449 gg 3012450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 50554885 - 50554958
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  50554885 aacaatagttatgtgatgtgcgaatggtttgtttaaatagtactgattttgtcttttgattgtataggatgatg 50554958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 114
Target Start/End: Original strand, 6817373 - 6817468
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    |||||||||||||||||  ||||||||||| |||||||| |||||||||||| |||||||| |||||||||| ||||| ||||||||| |||||||    
T  6817373 tgttgaagattcggtgtatagaaatgatgggtggtgggcgtatgggcaaaaataactacaatagtcggtcttcatctttaagctctatctacaatg 6817468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 4854898 - 4854991
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||||||||| ||  ||| ||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  4854898 agattcggtgttcagaattgatggatggtgcgcgaatgagcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 4854991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 597 - 670
Target Start/End: Original strand, 52642609 - 52642682
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| |||||||||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  52642609 aacaatggttatgtgatgtgtcaatggtttgttaaaatagtactgattttgtcttttgattgtataggatgatg 52642682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 605 - 670
Target Start/End: Original strand, 6817591 - 6817656
Alignment:
Q  605 ttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  6817591 ttatgtgatgtgtgaatggtttgtttaaatagtactaattttgtcttttgattgtatatgatgatg 6817656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 33599720 - 33599813
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| | |||| |||||||   ||||||||||||||||||||||  ||||||| |||||||| ||||||||||||||||||    
T  33599720 agattcggtgttcagaattaatgggtggtgggtgaatgggcaaaaacaactacaacaaccggtcttcatcttcaaactctatgtacaatgatga 33599813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 1443746 - 1443653
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  1443746 agattcagtgtttagaattgatgggtggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 1443653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 50554779 - 50554836
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  50554779 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagtcaacactgtcaa 50554836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 33599925 - 33599997
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  33599925 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 33599997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 46582485 - 46582565
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||||| |||||| ||||| ||  |||||||||||||||||||||| ||||| || ||||||||||||||    
T  46582485 agattcggtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaatcggtattcatcttcaagctcta 46582565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 6817477 - 6817534
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  6817477 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 6817534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 9120580 - 9120673
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| ||||||  |||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  9120580 agattcagtgtttagaattgatgggcggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 9120673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 666
Target Start/End: Original strand, 26224327 - 26224396
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggat 666  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  26224327 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggat 26224396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 27088628 - 27088563
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtata 662  Q
    |||||||||||| |||||| |||||| |||||||||||  ||||||||||||||||||||||||||    
T  27088628 aacaatagttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtata 27088563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 27088833 - 27088740
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||| || ||||||  |||| ||  ||||||||||||||||||||||  |||| || ||||||||||||||||| |||||||||    
T  27088833 agattcggtgttcaaaattgatggggggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgttcaatgatga 27088740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 47011980 - 47012073
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  |||| |||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  47011980 agattcagtgtttagaattgatgggtggtgcgcggatggacaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 47012073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 34777077 - 34777162
Alignment:
Q  32 gtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||| |||||| ||||| ||  ||||| ||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  34777077 gtgttcagaattgatgggtggtgcgcgaatggg-aaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 34777162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 26224122 - 26224215
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||| || |||||| ||||| ||  ||||||||||| ||||||||||  || | || |||||| ||||||||||||||||||||    
T  26224122 agattcggtgttcataattgatgggtggtgtgcgaatgggcaaaaataactacaacaaccgatattcatcttcgagctctatgtacaatgatga 26224215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 31237418 - 31237475
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||| ||||||||    
T  31237418 gagagcttcaatgttgctgtcctagaatttgtgttgtaagaaaagtcaagactgtcaa 31237475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 541 - 596
Target Start/End: Original strand, 51895166 - 51895221
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtc 596  Q
    |||||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  51895166 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaaaccaacactgtc 51895221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 1443647 - 1443590
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  1443647 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 1443590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 9120679 - 9120736
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  9120679 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaagagcaaacactgtcaa 9120736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 33599819 - 33599876
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||  |||||| ||||    
T  33599819 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagcaaacactatcaa 33599876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 52642503 - 52642560
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||| |||||| |||||    
T  52642503 gagagcttcaatgttggtgtcctagaatttatgttgtaaaaaaagccaacaccgtcaa 52642560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 3012454 - 3012497
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  3012454 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaa 3012497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 541 - 584
Target Start/End: Original strand, 26224221 - 26224264
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  26224221 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaa 26224264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Complemental strand, 2870672 - 2870635
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtggg 56  Q
    |||||||||||||||||||||||||||||| |||||||    
T  2870672 tgttgaagattcggtgttcagaaatgatgggtggtggg 2870635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 4854997 - 4855054
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |   |||||||||||    
T  4854997 gagagcttcaatgttggtgtcctaaaatttgtgttgtaagaataccaaacactgtcaa 4855054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 34777168 - 34777209
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaa 582  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  34777168 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaa 34777209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 47012079 - 47012136
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| || || ||||||||||| ||  |||||||||||    
T  47012079 gagagcttcaatgttggtgtcctagaaattgtgttgtaagaagagcaaacactgtcaa 47012136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 25277268 - 25277297
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatgg 48  Q
    ||||||||||||||||||||||||||||||    
T  25277268 tgttgaagattcggtgttcagaaatgatgg 25277297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 541 - 582
Target Start/End: Complemental strand, 27088734 - 27088693
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaa 582  Q
    |||||||||||||||||||||||| ||||| |||||| ||||    
T  27088734 gagagcttcaatgttggtgtcctagaatttgtgttgtgagaa 27088693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Original strand, 34777274 - 34777331
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  34777274 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 34777331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 48
Target Start/End: Original strand, 45045404 - 45045433
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatgg 48  Q
    ||||||||||||||||||||||||||||||    
T  45045404 tgttgaagattcggtgttcagaaatgatgg 45045433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 103; Significance: 7e-51; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 544 - 670
Target Start/End: Original strand, 44274947 - 44275073
Alignment:
Q  544 agcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgat 643  Q
    ||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||  ||    
T  44274947 agcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaacaatagttatgtgatgtgtgaataatttgtttaaatagtacatat 44275046  T
Q  644 tttgtcttttgattgtataggatgatg 670  Q
    |||||||||||||||||||||||||||    
T  44275047 tttgtcttttgattgtataggatgatg 44275073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 46199137 - 46199008
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||||||||||||||||| |||||||||| | |||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  46199137 gagagcttcaatgttggtgccctataatttgtattgtaagaaaagccaacactgtcaacaatggctatgtgatgtgtgaatgatttgtttaaatagtact 46199038  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||| ||||||||||||||||    
T  46199037 gattttgtcttttaattgtataggatgatg 46199008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 21350112 - 21349983
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||  ||||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  21350112 gagagcttcaatgttggtgtcctaaaatttgtgtactaagaaaaaccaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtaca 21350013  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||    
T  21350012 gattttgtcttttgattgtataggatgatg 21349983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 547 - 670
Target Start/End: Complemental strand, 43766533 - 43766410
Alignment:
Q  547 ttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgatttt 646  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||  |||||    
T  43766533 ttcaatgttggtgtcctaaaatttgtgttgtaagaaaaggcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaagtagtacaaatttt 43766434  T
Q  647 gtcttttgattgtataggatgatg 670  Q
    ||||||| ||||||||||||||||    
T  43766433 gtctttttattgtataggatgatg 43766410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 546 - 670
Target Start/End: Original strand, 30598940 - 30599063
Alignment:
Q  546 cttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattt 645  Q
    |||||||||||||| |||| ||||| ||||||||||||||  ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  30598940 cttcaatgttggtgacctagaatttgtgttgtaagaaaagctaacactgtcaacaatggttatgt-atgtgtgaatgatttgtttaaatagtacttattt 30599038  T
Q  646 tgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||| |||||||    
T  30599039 tgtcttttgattgtataagatgatg 30599063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 20 - 116
Target Start/End: Complemental strand, 21350216 - 21350120
Alignment:
Q  20 gttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgat 116  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  21350216 gttgaagattcggtgttcagaaatgatgggtggtgggcgtatgggcaaaaacaactacaacactcggtcttcatcttcaagctctatgtacaatgat 21350120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 21 - 120
Target Start/End: Original strand, 30598833 - 30598932
Alignment:
Q  21 ttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatgagg 120  Q
    |||||||||||||||||||||||||||| |||||||| |||| || |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30598833 ttgaagattcggtgttcagaaatgatgggtggtgggcgtatgagctaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatgagg 30598932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 23292065 - 23292166
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||| | |||||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||||||||    
T  23292065 tgttgaagattcggtgttcagaaatgataggtggtgggcgtatgggcaaaaacaactccatcagtcggtcttcatcttcaagctctatgtacaatgatga 23292164  T
Q  119 gg 120  Q
    ||    
T  23292165 gg 23292166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 27897686 - 27897787
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||| ||||||||||  |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  27897686 tgttgaagattcggtgtttagaaatgatgagtggtgggcgtatgggcaaaaacaactacaacagccggtcttcatcttcaagctctatgtacaatgatga 27897785  T
Q  119 gg 120  Q
    ||    
T  27897786 gg 27897787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 42282095 - 42281996
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||||||||||| | |||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  42282095 tgttgaagatttggtgttcagaaatgataggtggtgggcgtatgggcaaagacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 42281996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 20 - 118
Target Start/End: Complemental strand, 51685972 - 51685874
Alignment:
Q  20 gttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||| | |||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  51685972 gttgaagatttgatgttcataaatgatgggtggtgggcgtatgggcaaaaacagctacaacagtcggtcttcatcttcaagctctatgtacaatgatga 51685874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 2378536 - 2378435
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||| ||||||||||||  |||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||    
T  2378536 tgttgaagattcggtggtcagaaatgatgagtggtgggcgtttgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtaaaataatga 2378437  T
Q  119 gg 120  Q
    ||    
T  2378436 gg 2378435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 43766644 - 43766543
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||  |||| ||||||||||| || ||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43766644 tgttgaagattcaatgtttagaaatgatgggtgatgggcgtatgggcataaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 43766545  T
Q  119 gg 120  Q
    ||    
T  43766544 gg 43766543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 41978940 - 41978847
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| |||||||||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  41978940 agattcggtgttcagaattgatggatggtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 41978847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 31 - 114
Target Start/End: Complemental strand, 24846157 - 24846074
Alignment:
Q  31 ggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    |||||||||||||||||| |||||| | |||||||||||||| |||||| |||||||||| |||||||||||||||||||||||    
T  24846157 ggtgttcagaaatgatgggtggtggacgtatgggcaaaaacagctacaatagtcggtcttcatcttcaagctctatgtacaatg 24846074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 599 - 670
Target Start/End: Original strand, 27897899 - 27897970
Alignment:
Q  599 caatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||| ||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  27897899 caatggttatgtgatgtgcgaatggtttgtgtaaatagtactgattttgtcttttgattgtataggatgatg 27897970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 27 - 118
Target Start/End: Original strand, 53188279 - 53188370
Alignment:
Q  27 attcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||| |||||||||| |||||| ||||| ||  |||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||    
T  53188279 attcagtgttcagaattgatgggtggtgcgcgaatgggcaaaaacaactacaacaatcggtattcatcttcaagctctatgtacaatgatga 53188370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 51685762 - 51685689
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||| ||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||    
T  51685762 aacaatggttatgtgacgtgtgaatggtttgttaaaatagtaccgattttgtcttttgattgtataggatgatg 51685689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 54 - 120
Target Start/End: Original strand, 44274874 - 44274940
Alignment:
Q  54 gggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatgagg 120  Q
    |||| ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||    
T  44274874 gggcgtatgggcaaaaacaactacaacagtcgatcttcatcttcaatctctatgtacaatgatgagg 44274940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 35904326 - 35904419
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| ||||||||| |||||| ||||| ||  || ||||||||||||||||||| ||||| || |||||||||||| ||||||||||||||    
T  35904326 agattcgatgttcagaattgatgggtggtgcgcgaataggcaaaaacaactacaacaatcggtattcatcttcaagctccatgtacaatgatga 35904419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 605 - 670
Target Start/End: Complemental strand, 42281876 - 42281811
Alignment:
Q  605 ttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||| ||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||    
T  42281876 ttatttgatgtgcgaatggtttgttaaaatagtactgattttgtcttttgattgtataggatgatg 42281811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 53188482 - 53188554
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  |||||||||||||||||||||||||||||||||    
T  53188482 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggatgat 53188554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 624 - 670
Target Start/End: Complemental strand, 2378324 - 2378278
Alignment:
Q  624 tttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2378324 tttgtttaaatagtactgattttgtcttttgattgtataggatgatg 2378278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 2378431 - 2378374
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  2378431 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 2378374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 27897791 - 27897848
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  27897791 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 27897848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 51685868 - 51685811
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||    
T  51685868 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaa 51685811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 597 - 669
Target Start/End: Original strand, 35904531 - 35904603
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgat 669  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||||||||| |||||||||||||||    
T  35904531 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtctttttattgtataggatgat 35904603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 44795446 - 44795366
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    |||||||||||||| || |||||| ||||| ||| ||||||||||||||||||||||  |||| || ||||||||||||||    
T  44795446 agattcggtgttcaaaattgatgggtggtgcgcaaatgggcaaaaacaactacaacaaccggtattcatcttcaagctcta 44795366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 25 - 114
Target Start/End: Original strand, 7883829 - 7883915
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatg 114  Q
    ||||||||||||||||| ||||||   ||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||    
T  7883829 agattcggtgttcagaattgatgg---gtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatg 7883915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 594
Target Start/End: Complemental strand, 42281990 - 42281937
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactg 594  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  42281990 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactg 42281937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 542 - 598
Target Start/End: Original strand, 48829711 - 48829767
Alignment:
Q  542 agagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||| || ||||| |||||||||||||| ||||||||||||    
T  48829711 agagcttcaatgttggtgtcttagaatttgtgttgtaagaaaagccaacactgtcaa 48829767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 631 - 670
Target Start/End: Original strand, 48829831 - 48829870
Alignment:
Q  631 aaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  48829831 aaatagtactgattttgtcttttgattgtataggatgatg 48829870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 7883925 - 7883982
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||| ||||||||  |||||||||||    
T  7883925 gagagcttcaatgttggtgtcctagaatttgtgttgcaagaaaagcaaacactgtcaa 7883982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 35904425 - 35904482
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  35904425 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 35904482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 41978841 - 41978784
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  41978841 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaatagcaaacactgtcaa 41978784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 53188376 - 53188433
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||| ||  |||||||||||    
T  53188376 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 53188433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 2661461 - 2661381
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctcta 105  Q
    ||||||||||||||| | |||||| ||||| ||  ||||||||||||||||||||||   ||| || ||||||||||||||    
T  2661461 agattcggtgttcaggattgatggctggtgcgcgaatgggcaaaaacaactacaacaactggtattcatcttcaagctcta 2661381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 544 - 596
Target Start/End: Original strand, 23292173 - 23292225
Alignment:
Q  544 agcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtc 596  Q
    ||||||||||||||||||||| ||||| |||||||||||||  ||||||||||    
T  23292173 agcttcaatgttggtgtcctagaatttgtgttgtaagaaaaaccaacactgtc 23292225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 545 - 596
Target Start/End: Complemental strand, 24846060 - 24846009
Alignment:
Q  545 gcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtc 596  Q
    ||||||||||||||||| || ||||| |||||||||||||| ||||||||||    
T  24846060 gcttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaacactgtc 24846009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 541 - 584
Target Start/End: Complemental strand, 1847175 - 1847132
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaa 584  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||    
T  1847175 gagagcttgaatgttggtgtcctataatttgtgttgttagaaaa 1847132  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 552 - 598
Target Start/End: Original strand, 35862131 - 35862177
Alignment:
Q  552 tgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||| ||||||| |||| ||||||||||||| ||||||||    
T  35862131 tgttggtgtcccataatttgtgttttaagaaaagtcaatactgtcaa 35862177  T

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Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 13466547 - 13466474
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||||||||| ||||| |||||| || |  |||||||||||  ||||  |||||||||||||||    
T  13466547 aacaatggttatgtgatgtgggaatggtttgttaaacttttactgattttgaattttctttgtataggatgatg 13466474  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 13466716 - 13466639
Alignment:
Q  31 ggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgt 108  Q
    |||||| | ||||||||| | ||||||  ||||||||||||| ||| || |||||| ||| ||||| |||||||||||    
T  13466716 ggtgttaaaaaatgatgggttgtgggcgcatgggcaaaaacagctataatagtcggccttcatcttgaagctctatgt 13466639  T

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Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 634
Target Start/End: Complemental strand, 24845959 - 24845922
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaat 634  Q
    |||||| ||||||||||||||||||| |||||||||||    
T  24845959 aacaatggttatgtgatgtgtgaatggtttgtttaaat 24845922  T

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Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 597 - 654
Target Start/End: Complemental strand, 41978735 - 41978678
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttg 654  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||| ||||||    
T  41978735 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgccttttg 41978678  T

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Target: chr6 (Bit Score: 102; Significance: 3e-50; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 541 - 670
Target Start/End: Original strand, 7371710 - 7371839
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    ||||||||||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||    
T  7371710 gagagcttcaatgctggtgtcctagaatttgtgttgtaagaaaagccaacactgtcaacaatagttatgtgacatgtgaatgatttgtttaaatagtact 7371809  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||||||| ||||||    
T  7371810 gattttgtcttttgattgtatagaatgatg 7371839  T

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Target: chr6; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 541 - 670
Target Start/End: Complemental strand, 20524825 - 20524696
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaacaatagttatgtgatgtgtgaatgatttgtttaaatagtact 640  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||     
T  20524825 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaaggcaacactgtcaacaatggttatgtgatgtgtgaatgatttgtttaaatagtaca 20524726  T
Q  641 gattttgtcttttgattgtataggatgatg 670  Q
     |||||||||| || |||||||||||||||    
T  20524725 aattttgtcttctgcttgtataggatgatg 20524696  T

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Target: chr6; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 20524930 - 20524829
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20524930 tgttgaagattcagtgttcagaaatgatgggtggtgggtgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 20524831  T
Q  119 gg 120  Q
    ||    
T  20524830 gg 20524829  T

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Target: chr6; HSP #4
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 6902512 - 6902413
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6902512 tgttgaagatttggtgttcataaatgatgggtggtgggcgtatgggcaaaaacaactacaacagtcggtcttcatcttcaagctctatgtacaatgatga 6902413  T

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Target: chr6; HSP #5
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 11356748 - 11356647
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  11356748 tgttgaagattcggtgttcagaaatgaagggcggtgggcgtatgggcaaaaacaactacaacagtcggtgttcatcttcaagctctatgtacaatgatga 11356649  T
Q  119 gg 120  Q
    ||    
T  11356648 gg 11356647  T

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Target: chr6; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 19 - 120
Target Start/End: Original strand, 7371605 - 7371706
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||||||||||| |||| ||| | |||||||||| | |||||| ||||||| || ||||||||||| |||||||||||||||    
T  7371605 tgttgaagattcggtgttcagaaatgatgggtggtaggcgtgtgggcaaaaatacctacaatagtcggttttcatcttcaagctatatgtacaatgatga 7371704  T
Q  119 gg 120  Q
    ||    
T  7371705 gg 7371706  T

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Target: chr6; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 19 - 118
Target Start/End: Complemental strand, 9399671 - 9399572
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||| |||||||||||||||||| |||||| | |||||| |||||||||||||  |||||||||| ||||||||||||| ||| |||||||||    
T  9399671 tgttgaagatttggtgttcagaaatgatgggtggtggacgtatgggaaaaaacaactacagtagtcggtcttcatcttcaagctctctgttcaatgatga 9399572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 33267514 - 33267618
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaa-caactacaacagtcggtcttga----tcttcaagctctatgtacaat 113  Q
    ||||||||||| |||||||||||||||||| |||||||| |||||||||||| || ||||||||||||||||| |    |||||||||||||||| ||||    
T  33267514 tgttgaagatttggtgttcagaaatgatgggtggtgggcgtatgggcaaaaaccagctacaacagtcggtcttaatctttcttcaagctctatgtgcaat 33267613  T
Q  114 gatga 118  Q
    |||||    
T  33267614 gatga 33267618  T

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Target: chr6; HSP #9
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 6902294 - 6902228
Alignment:
Q  604 gttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||||||||||    
T  6902294 gttatgtgatgtgtgaatggtttgttaaaatagaactgattttgtcttttgattgtataggatgatg 6902228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 11356530 - 11356464
Alignment:
Q  604 gttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  11356530 gttatgtgatgtgtgaatggtttgtttaaatagtacttattttgtcttttgattgtatatgatgatg 11356464  T

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Target: chr6; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 7050910 - 7050837
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| |||||| |||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  7050910 aacaatggttatgcgatgtgtgaatggtttgttaaaatagtattgattttgtcttttgattgtataggatgatg 7050837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 9399460 - 9399387
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||    
T  9399460 aacaatggttatgtaatgtgtgaatggtttgtttaaatagtactaattttgtcttttgattgtataggacgatg 9399387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 597 - 670
Target Start/End: Complemental strand, 10569551 - 10569478
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    |||||| |||||| |||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||||    
T  10569551 aacaatggttatgcgatgtgtgaatggtttgttaaaatagtactgattttgtcttttgattgtacaggatgatg 10569478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 7051016 - 7050959
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  7051016 gagagcttcaatgttggtgtcctataatttgtgttgtaagaaaagccaacactgtcaa 7050959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 32454789 - 32454882
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||| ||||| |||| |||||| ||||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  32454789 agattcagtgtttagaattgatgggtggtgcgcggatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 32454882  T

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Target: chr6; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 32437662 - 32437752
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||| ||||||   ||| ||  ||||||||||||||||||||||  |||| || |||||||||||||||||||||||||||    
T  32437662 agattcggtgttcagaattgatgg---gtgcgcgaatgggcaaaaacaactacaacaaccggtattcatcttcaagctctatgtacaatgatga 32437752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 25 - 90
Target Start/End: Original strand, 13611181 - 13611246
Alignment:
Q  25 agattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtctt 90  Q
    ||||||||||||||||| |||||| |||||||| ||| |||||||||||||||||||| |||||||    
T  13611181 agattcggtgttcagaattgatgggtggtgggcgtattggcaaaaacaactacaacagccggtctt 13611246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 597 - 666
Target Start/End: Original strand, 32437864 - 32437933
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggat 666  Q
    |||||| ||||| |||||| |||||| |||||||||||  ||||||||||||||||||||||||||||||    
T  32437864 aacaatggttatttgatgtatgaatgttttgtttaaattatactgattttgtcttttgattgtataggat 32437933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 33267624 - 33267681
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||    
T  33267624 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagtcaacattgtcaa 33267681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 6902407 - 6902350
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||| |||||||||| ||||||||||||    
T  6902407 gagagcttcaatgttggtgtcctagaatttgtgtagtaagaaaagccaacactgtcaa 6902350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 594
Target Start/End: Complemental strand, 9399566 - 9399513
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactg 594  Q
    |||||||||||||||||||||||| ||||| |||||||||||||| ||||||||    
T  9399566 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactg 9399513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 543 - 598
Target Start/End: Complemental strand, 10569654 - 10569599
Alignment:
Q  543 gagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||| ||||| |||||||||||||| ||||||| ||||    
T  10569654 gagcttcaatgttggtgtcctagaatttgtgttgtaagaaaagccaacactatcaa 10569599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 18644733 - 18644675
Alignment:
Q  60 atgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    |||||||||||||||||||||| | ||| || |||||||||||| ||||||||||||||    
T  18644733 atgggcaaaaacaactacaacaattggtattcatcttcaagctccatgtacaatgatga 18644675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 11356643 - 11356586
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||||| || ||||| |||||||||||||| ||||||| ||||    
T  11356643 gagagcttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaacactatcaa 11356586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 597 - 662
Target Start/End: Complemental strand, 18644623 - 18644558
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtata 662  Q
    |||||| ||||| |||| | |||||| |||||||||||  ||||||||||||||||||||||||||    
T  18644623 aacaattgttatttgatatatgaatgttttgtttaaattatactgattttgtcttttgattgtata 18644558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 597 - 643
Target Start/End: Original strand, 33267730 - 33267776
Alignment:
Q  597 aacaatagttatgtgatgtgtgaatgatttgtttaaatagtactgat 643  Q
    |||||| ||||||||||||||||||| ||||||||||||||| ||||    
T  33267730 aacaatggttatgtgatgtgtgaatggtttgtttaaatagtattgat 33267776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 541 - 582
Target Start/End: Original strand, 32454888 - 32454929
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaa 582  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  32454888 gagagcttcaatgttggtgtcctagaatttgtgttgtaagaa 32454929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 14338165 - 14338221
Alignment:
Q  34 gttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtctt 90  Q
    ||||||||||||||| |||||||| | |||||||||||||| | |||||| ||||||    
T  14338165 gttcagaaatgatgggtggtgggcgtttgggcaaaaacaaccataacagttggtctt 14338221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 544 - 598
Target Start/End: Original strand, 32437761 - 32437815
Alignment:
Q  544 agcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||| ||||||| ||||| ||||||||||| ||  |||||||||||    
T  32437761 agcttcaatgttgttgtcctagaatttgtgttgtaagaacagcaaacactgtcaa 32437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 78; Significance: 6e-36; HSPs: 3)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 19 - 120
Target Start/End: Complemental strand, 1109 - 1008
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||||||||||||||||||||||| ||  ||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  1109 tgttgaagattcggtgttcagaaatgaagggcggtgggcgtatgggcaaaaacaactacaacagtcggtgttcatcttcaagctctatgtacaatgatga 1010  T
Q  119 gg 120  Q
    ||    
T  1009 gg 1008  T

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Target: scaffold0345; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 604 - 670
Target Start/End: Complemental strand, 891 - 825
Alignment:
Q  604 gttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||    
T  891 gttatgtgatgtgtgaatggtttgtttaaatagtacttattttgtcttttgattgtatatgatgatg 825  T

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Target: scaffold0345; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 541 - 598
Target Start/End: Complemental strand, 1004 - 947
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    ||||||||||||||||||||| || ||||| |||||||||||||| ||||||| ||||    
T  1004 gagagcttcaatgttggtgtcatagaatttgtgttgtaagaaaagccaacactatcaa 947  T

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Target: scaffold0004 (Bit Score: 63; Significance: 5e-27; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 604 - 670
Target Start/End: Original strand, 107376 - 107442
Alignment:
Q  604 gttatgtgatgtgtgaatgatttgtttaaatagtactgattttgtcttttgattgtataggatgatg 670  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  107376 gttatgtgatgtgtgaatggtttgtttaaatagtactgattttgtcttttgattgtataggatgatg 107442  T

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Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 107158 - 107257
Alignment:
Q  19 tgttgaagattcggtgttcagaaatgatggatggtgggcatatgggcaaaaacaactacaacagtcggtcttgatcttcaagctctatgtacaatgatga 118  Q
    ||||||| ||| |||||| ||||||||||| |||||||| || | |||||||||  ||||||||||| |||| |||||||| ||| ||||||||||||||    
T  107158 tgttgaacatttggtgtttagaaatgatgggtggtgggcgtacgtgcaaaaacagttacaacagtcgatcttcatcttcaaactcaatgtacaatgatga 107257  T

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Target: scaffold0004; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 541 - 598
Target Start/End: Original strand, 107263 - 107320
Alignment:
Q  541 gagagcttcaatgttggtgtcctataatttttgttgtaagaaaagtcaacactgtcaa 598  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| |||||| ||||||    
T  107263 gagagcttcaatgttggtgtcctaaaatttgtgttgtaagaaaattcaacattgtcaa 107320  T

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