View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5746_low_39 (Length: 375)

Name: NF5746_low_39
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5746_low_39
NF5746_low_39
[»] scaffold1697 (1 HSPs)
scaffold1697 (23-367)||(453-804)
[»] chr3 (65 HSPs)
chr3 (10-368)||(29663037-29663388)
chr3 (16-368)||(8213584-8213928)
chr3 (10-368)||(31033287-31033651)
chr3 (10-287)||(32293476-32293748)
chr3 (10-368)||(5653069-5653418)
chr3 (16-368)||(18532234-18532576)
chr3 (16-368)||(5468831-5469181)
chr3 (16-368)||(51783868-51784216)
chr3 (16-368)||(19696338-19696684)
chr3 (10-287)||(5713909-5714191)
chr3 (10-287)||(5724819-5725101)
chr3 (10-287)||(5767267-5767549)
chr3 (16-370)||(4418765-4419110)
chr3 (16-368)||(7075058-7075402)
chr3 (16-367)||(7998408-7998752)
chr3 (16-368)||(5594424-5594769)
chr3 (16-368)||(18244585-18244934)
chr3 (16-368)||(36995265-36995612)
chr3 (16-370)||(11108417-11108761)
chr3 (23-368)||(17983016-17983361)
chr3 (16-368)||(20574910-20575259)
chr3 (10-287)||(17993072-17993360)
chr3 (16-368)||(21676539-21676896)
chr3 (10-368)||(4626626-4626994)
chr3 (16-368)||(5015558-5015907)
chr3 (16-368)||(28023121-28023475)
chr3 (16-368)||(47025299-47025646)
chr3 (16-368)||(24330005-24330356)
chr3 (16-365)||(22868918-22869268)
chr3 (16-365)||(22883977-22884327)
chr3 (16-368)||(48467773-48468120)
chr3 (16-368)||(4344743-4345099)
chr3 (16-368)||(28341025-28341370)
chr3 (16-368)||(10397979-10398337)
chr3 (16-368)||(18227037-18227389)
chr3 (23-368)||(10644923-10645266)
chr3 (16-368)||(28114021-28114366)
chr3 (23-367)||(20067896-20068232)
chr3 (23-363)||(35882619-35882954)
chr3 (16-368)||(5607381-5607734)
chr3 (23-363)||(6203759-6204091)
chr3 (23-363)||(32441007-32441339)
chr3 (23-367)||(4723484-4723823)
chr3 (23-367)||(4794703-4795037)
chr3 (23-363)||(8287542-8287876)
chr3 (23-363)||(8297825-8298159)
chr3 (23-363)||(15890777-15891111)
chr3 (16-288)||(31962617-31962885)
chr3 (43-280)||(16622643-16622870)
chr3 (23-363)||(15739166-15739499)
chr3 (23-363)||(29146828-29147160)
chr3 (23-367)||(18275120-18275457)
chr3 (23-367)||(18290421-18290758)
chr3 (23-367)||(18305722-18306059)
chr3 (23-363)||(22385650-22385983)
chr3 (23-363)||(18053115-18053450)
chr3 (23-287)||(18332481-18332739)
chr3 (298-367)||(31962523-31962593)
chr3 (301-368)||(5714215-5714282)
chr3 (301-368)||(5725125-5725192)
chr3 (301-368)||(5767176-5767243)
chr3 (301-368)||(17992982-17993049)
chr3 (301-368)||(32293770-32293837)
chr3 (298-363)||(18332760-18332825)
chr3 (332-365)||(6540812-6540845)
[»] chr4 (27 HSPs)
chr4 (24-349)||(1902165-1902479)
chr4 (16-346)||(15229769-15230095)
chr4 (16-368)||(15282952-15283299)
chr4 (23-368)||(6571760-6572103)
chr4 (16-368)||(33671824-33672169)
chr4 (16-368)||(39852538-39852882)
chr4 (16-368)||(54835287-54835636)
chr4 (16-368)||(27161341-27161687)
chr4 (16-368)||(14100441-14100788)
chr4 (16-368)||(18798638-18798984)
chr4 (16-365)||(21971601-21971943)
chr4 (16-368)||(40103661-40104009)
chr4 (16-370)||(5007773-5008122)
chr4 (10-278)||(15389495-15389755)
chr4 (10-287)||(24459851-24460140)
chr4 (16-368)||(31124536-31124889)
chr4 (16-365)||(30755654-30756002)
chr4 (23-367)||(24590386-24590719)
chr4 (23-363)||(34186989-34187324)
chr4 (23-367)||(14761331-14761668)
chr4 (23-363)||(14666925-14667256)
chr4 (23-363)||(17014950-17015286)
chr4 (23-367)||(24114569-24114906)
chr4 (23-367)||(36342542-36342879)
chr4 (304-368)||(18315202-18315266)
chr4 (301-368)||(24459762-24459829)
chr4 (301-370)||(15389400-15389469)
[»] chr2 (49 HSPs)
chr2 (10-368)||(34157727-34158091)
chr2 (10-368)||(16164362-16164727)
chr2 (10-368)||(22925145-22925510)
chr2 (10-287)||(27393440-27393708)
chr2 (16-368)||(13934560-13934904)
chr2 (16-368)||(37949335-37949682)
chr2 (10-368)||(3785371-3785740)
chr2 (16-368)||(12714614-12714962)
chr2 (23-368)||(40235399-40235739)
chr2 (16-368)||(21701183-21701524)
chr2 (16-368)||(9347999-9348342)
chr2 (16-368)||(34288235-34288580)
chr2 (16-368)||(34293295-34293640)
chr2 (16-368)||(27805588-27805934)
chr2 (16-368)||(258766-259113)
chr2 (16-368)||(12588691-12589039)
chr2 (16-367)||(16893783-16894128)
chr2 (16-280)||(19454525-19454782)
chr2 (16-365)||(39891955-39892297)
chr2 (16-367)||(16827352-16827698)
chr2 (16-368)||(34863561-34863915)
chr2 (16-368)||(39049832-39050182)
chr2 (16-365)||(19414517-19414859)
chr2 (16-368)||(37927251-37927600)
chr2 (16-368)||(21675188-21675542)
chr2 (16-368)||(31878162-31878517)
chr2 (10-368)||(27119405-27119771)
chr2 (10-287)||(31890576-31890852)
chr2 (16-368)||(11633197-11633545)
chr2 (16-368)||(32051679-32052034)
chr2 (23-363)||(12657430-12657762)
chr2 (10-121)||(5807170-5807282)
chr2 (23-368)||(37377049-37377402)
chr2 (23-367)||(28884102-28884437)
chr2 (10-121)||(34302715-34302827)
chr2 (16-288)||(37684004-37684269)
chr2 (16-288)||(37699269-37699534)
chr2 (23-367)||(23126582-23126919)
chr2 (23-363)||(20839789-20840139)
chr2 (16-198)||(27779103-27779284)
chr2 (16-198)||(27818861-27819042)
chr2 (23-363)||(27432459-27432797)
chr2 (208-368)||(34271786-34271941)
chr2 (298-368)||(37683908-37683978)
chr2 (298-368)||(37699173-37699243)
chr2 (208-368)||(27779316-27779481)
chr2 (208-368)||(27819073-27819238)
chr2 (301-368)||(31890488-31890555)
chr2 (301-368)||(27393726-27393793)
[»] chr8 (25 HSPs)
chr8 (10-368)||(19658186-19658534)
chr8 (10-368)||(18711350-18711715)
chr8 (16-368)||(12090708-12091054)
chr8 (10-368)||(21374209-21374575)
chr8 (16-368)||(29831207-29831557)
chr8 (10-368)||(44563863-44564231)
chr8 (10-368)||(33245386-33245740)
chr8 (16-366)||(19676326-19676676)
chr8 (16-368)||(28359937-28360285)
chr8 (16-368)||(31356410-31356759)
chr8 (23-368)||(9356515-9356856)
chr8 (16-368)||(31487857-31488203)
chr8 (16-368)||(3327489-3327837)
chr8 (10-280)||(22078976-22079238)
chr8 (16-371)||(19206344-19206690)
chr8 (16-368)||(33260608-33260965)
chr8 (23-367)||(18792599-18792935)
chr8 (23-363)||(19689990-19690324)
chr8 (23-363)||(14559516-14559850)
chr8 (23-363)||(16285341-16285669)
chr8 (23-363)||(16279445-16279776)
chr8 (23-367)||(27606891-27607228)
chr8 (23-363)||(2135250-2135582)
chr8 (209-287)||(15770666-15770742)
chr8 (301-368)||(22078895-22078962)
[»] chr5 (61 HSPs)
chr5 (16-368)||(3791435-3791780)
chr5 (16-368)||(34618412-34618757)
chr5 (16-368)||(40471471-40471817)
chr5 (10-368)||(9547614-9547975)
chr5 (10-368)||(33878019-33878386)
chr5 (10-365)||(29888105-29888472)
chr5 (16-368)||(37768912-37769255)
chr5 (16-368)||(37756874-37757222)
chr5 (16-368)||(8663396-8663743)
chr5 (16-367)||(18373456-18373803)
chr5 (16-368)||(24725861-24726208)
chr5 (16-368)||(32594195-32594542)
chr5 (16-365)||(13322754-13323097)
chr5 (16-368)||(37669407-37669751)
chr5 (16-368)||(43080146-43080494)
chr5 (16-287)||(22890363-22890627)
chr5 (23-368)||(6876206-6876544)
chr5 (16-368)||(25200923-25201271)
chr5 (16-368)||(25265078-25265426)
chr5 (16-368)||(28651129-28651481)
chr5 (16-368)||(24683334-24683681)
chr5 (10-287)||(11326524-11326801)
chr5 (16-368)||(37356564-37356911)
chr5 (23-280)||(23894107-23894355)
chr5 (16-368)||(30170363-30170708)
chr5 (16-368)||(28957706-28958054)
chr5 (16-368)||(31824328-31824675)
chr5 (16-368)||(15756773-15757125)
chr5 (16-367)||(5639681-5640026)
chr5 (16-368)||(18498646-18498998)
chr5 (23-367)||(33294426-33294766)
chr5 (23-363)||(22997043-22997375)
chr5 (23-367)||(15656680-15657021)
chr5 (16-368)||(41676603-41676944)
chr5 (10-287)||(13183795-13184081)
chr5 (208-365)||(31433545-31433700)
chr5 (23-367)||(33779388-33779727)
chr5 (16-368)||(30031309-30031667)
chr5 (16-368)||(30153912-30154270)
chr5 (10-121)||(13439814-13439926)
chr5 (23-363)||(30936534-30936870)
chr5 (23-370)||(18125319-18125656)
chr5 (16-371)||(26482285-26482636)
chr5 (208-368)||(13439588-13439744)
chr5 (16-287)||(2512945-2513206)
chr5 (16-368)||(33518250-33518619)
chr5 (23-363)||(24686071-24686418)
chr5 (16-288)||(9319345-9319612)
chr5 (208-367)||(23628053-23628207)
chr5 (16-288)||(12134049-12134314)
chr5 (23-363)||(11551255-11551589)
chr5 (23-121)||(23716151-23716249)
chr5 (298-367)||(2513231-2513300)
chr5 (298-371)||(9319645-9319718)
chr5 (298-371)||(12134344-12134417)
chr5 (16-121)||(31433334-31433438)
chr5 (23-121)||(24971919-24972018)
chr5 (301-368)||(11326825-11326892)
chr5 (301-368)||(13183697-13183764)
chr5 (298-363)||(24972075-24972140)
chr5 (298-368)||(23894375-23894445)
[»] chr7 (42 HSPs)
chr7 (16-368)||(16043209-16043548)
chr7 (16-368)||(16749426-16749771)
chr7 (16-368)||(17525418-17525763)
chr7 (10-287)||(31087607-31087885)
chr7 (16-368)||(45389106-45389449)
chr7 (16-368)||(5145249-5145597)
chr7 (16-368)||(17527451-17527797)
chr7 (16-368)||(16734370-16734717)
chr7 (16-367)||(26437143-26437485)
chr7 (10-287)||(39210122-39210402)
chr7 (16-368)||(3447192-3447535)
chr7 (16-370)||(4201275-4201620)
chr7 (16-368)||(31126806-31127152)
chr7 (16-368)||(4143155-4143503)
chr7 (16-368)||(11442765-11443116)
chr7 (16-368)||(9620537-9620879)
chr7 (16-367)||(26535783-26536127)
chr7 (10-367)||(2776124-2776498)
chr7 (16-280)||(16448002-16448255)
chr7 (16-368)||(26667823-26668171)
chr7 (16-368)||(31562299-31562647)
chr7 (10-363)||(2108077-2108426)
chr7 (10-198)||(26485458-26485644)
chr7 (10-198)||(26682193-26682379)
chr7 (16-368)||(26514667-26515021)
chr7 (16-367)||(24590444-24590798)
chr7 (16-371)||(26272992-26273351)
chr7 (23-363)||(5129885-5130220)
chr7 (10-368)||(45734182-45734558)
chr7 (23-363)||(5161412-5161747)
chr7 (23-363)||(10914784-10915118)
chr7 (23-363)||(16501308-16501651)
chr7 (23-363)||(2156466-2156798)
chr7 (23-349)||(16516358-16516687)
chr7 (16-288)||(26317862-26318126)
chr7 (23-363)||(11422693-11423027)
chr7 (301-371)||(26317754-26317824)
chr7 (208-368)||(26681999-26682164)
chr7 (301-368)||(26512589-26512656)
chr7 (301-368)||(31087515-31087582)
chr7 (301-368)||(39210032-39210099)
chr7 (208-274)||(26512691-26512756)
[»] chr6 (51 HSPs)
chr6 (16-368)||(3697963-3698312)
chr6 (16-368)||(17090410-17090760)
chr6 (10-368)||(33373381-33373734)
chr6 (16-368)||(26775578-26775924)
chr6 (10-368)||(26788703-26789061)
chr6 (10-368)||(27251805-27252164)
chr6 (10-368)||(27359061-27359427)
chr6 (10-368)||(27449404-27449770)
chr6 (16-368)||(4759646-4759992)
chr6 (10-368)||(27197076-27197430)
chr6 (16-368)||(26114379-26114724)
chr6 (16-368)||(27046270-27046616)
chr6 (16-368)||(4722102-4722448)
chr6 (10-368)||(13521142-13521509)
chr6 (16-368)||(16941994-16942341)
chr6 (16-375)||(27288321-27288684)
chr6 (16-371)||(27627672-27628020)
chr6 (10-368)||(28163375-28163736)
chr6 (16-368)||(29574895-29575243)
chr6 (10-287)||(8891508-8891789)
chr6 (10-287)||(8902743-8903024)
chr6 (16-368)||(28209336-28209683)
chr6 (16-368)||(4774765-4775109)
chr6 (16-368)||(27487011-27487362)
chr6 (16-372)||(27270547-27270894)
chr6 (16-367)||(30555984-30556330)
chr6 (23-368)||(29503304-29503645)
chr6 (16-368)||(16676021-16676369)
chr6 (16-368)||(4543741-4544089)
chr6 (10-368)||(14142345-14142721)
chr6 (16-368)||(4527168-4527513)
chr6 (16-287)||(22456152-22456418)
chr6 (23-363)||(22932856-22933187)
chr6 (23-363)||(23855301-23855632)
chr6 (23-363)||(26920269-26920601)
chr6 (23-367)||(27021028-27021364)
chr6 (23-363)||(15422292-15422624)
chr6 (16-368)||(27009612-27009960)
chr6 (23-363)||(26990780-26991113)
chr6 (23-368)||(24302584-24302925)
chr6 (23-367)||(29551364-29551708)
chr6 (23-363)||(13296923-13297258)
chr6 (23-363)||(20162505-20162844)
chr6 (23-363)||(22169987-22170326)
chr6 (23-363)||(24865606-24865940)
chr6 (23-121)||(16751743-16751842)
chr6 (316-368)||(34462473-34462525)
chr6 (301-368)||(8891419-8891486)
chr6 (301-368)||(8902654-8902721)
chr6 (252-365)||(16751937-16752047)
chr6 (301-368)||(22456065-22456132)
[»] chr1 (9 HSPs)
chr1 (16-368)||(16206055-16206402)
chr1 (16-368)||(20339467-20339822)
chr1 (16-370)||(41791332-41791679)
chr1 (23-368)||(10964561-10964899)
chr1 (10-368)||(28152624-28152986)
chr1 (22-368)||(10946969-10947311)
chr1 (16-287)||(20462865-20463133)
chr1 (16-368)||(28586865-28587219)
chr1 (23-368)||(51640109-51640452)
[»] scaffold0260 (1 HSPs)
scaffold0260 (16-368)||(1790-2145)
[»] scaffold0748 (1 HSPs)
scaffold0748 (202-375)||(6685-6861)
[»] scaffold0032 (2 HSPs)
scaffold0032 (10-288)||(119162-119433)
scaffold0032 (301-368)||(119078-119145)
[»] scaffold0415 (1 HSPs)
scaffold0415 (16-368)||(7900-8243)
[»] scaffold0038 (1 HSPs)
scaffold0038 (16-368)||(9834-10181)
[»] scaffold0237 (1 HSPs)
scaffold0237 (16-367)||(12953-13301)
[»] scaffold0109 (1 HSPs)
scaffold0109 (10-368)||(22277-22627)
[»] scaffold0336 (1 HSPs)
scaffold0336 (16-368)||(11451-11803)
[»] scaffold0144 (1 HSPs)
scaffold0144 (16-368)||(24215-24572)
[»] scaffold0159 (4 HSPs)
scaffold0159 (16-368)||(7203-7560)
scaffold0159 (16-368)||(20756-21113)
scaffold0159 (209-368)||(21665-21828)
scaffold0159 (16-275)||(11416-11673)
[»] scaffold0143 (3 HSPs)
scaffold0143 (23-349)||(29185-29506)
scaffold0143 (301-368)||(7141-7208)
scaffold0143 (208-287)||(7040-7120)
[»] scaffold0124 (2 HSPs)
scaffold0124 (16-121)||(45882-45987)
scaffold0124 (23-367)||(32344-32690)
[»] scaffold0089 (3 HSPs)
scaffold0089 (23-363)||(45020-45349)
scaffold0089 (23-363)||(38095-38433)
scaffold0089 (23-287)||(31649-31913)
[»] scaffold0350 (1 HSPs)
scaffold0350 (16-287)||(5345-5608)
[»] scaffold0320 (1 HSPs)
scaffold0320 (208-287)||(20293-20371)
[»] scaffold0322 (1 HSPs)
scaffold0322 (300-368)||(8209-8277)


Alignment Details
Target: scaffold1697 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold1697
Description:

Target: scaffold1697; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 804 - 453
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    |||||||||||||||||| | |||| |||| |||||||  |||||| | |||||||||||||||||||| |||||||||||||||||||||||| ||||     
T  804 tcaatcatgcatgtttccaagtaatatgtcatgttgctcgagtgttgtatttttcaaaataacaatcctttcgctctgcccgaagcgaaagtgaaatttt 705  T
Q  122 ctataagggttttgtttgtttcggtattccattattaataaaaagatcgtcgtttcttccacggctttcacttttt-aaagtttatgttttttc----ct 216  Q
    || ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||     ||    
T  704 ctgtaagggttttgcttgtttcggtattccattattaataaaaagattgtcgtttcttccacggctttcacttttttaaattttatgtttttttttttct 605  T
Q  217 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatcatct 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||          |||||||||||||||||     
T  604 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaacctgcatgaaaaaaaaaactctttctaaaatcatcc 505  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  504 aatcattatatgcaggttgaaccataataaacccattgaacgtagtaatcct 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 152; Significance: 2e-80; HSPs: 65)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 29663388 - 29663037
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| ||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29663388 catcatcattccttcaatcatgcatgtttccgagtaatgggtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 29663289  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta 205  Q
    || ||||||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||       
T  29663288 gacagtgatattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttcttccacgact---actttttttagt--- 29663197  T
Q  206 tgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct 305  Q
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||    
T  29663196 gctttttcccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaatctctttct 29663100  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29663099 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29663037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 8213584 - 8213928
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  8213584 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8213682  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  8213683 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 8213774  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  8213775 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaagaaaaactctttctaaaatca 8213872  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8213873 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8213928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 31033651 - 31033287
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31033651 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 31033552  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag----ttt 204  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |    |||    
T  31033551 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 31033455  T
Q  205 atgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnct 299  Q
     | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||               |     
T  31033454 ttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcatagaaaaaaaaaaaacca 31033356  T
Q  300 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31033355 ttttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31033287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 32293476 - 32293748
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32293476 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 32293575  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | |||||  |||   | |    
T  32293576 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttt--agtgatttt 32293670  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  32293671 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 32293748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 5653069 - 5653418
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5653069 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5653168  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttat 206  Q
    || ||||||| ||||||||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | |||||  |||        
T  5653169 gacagtgatattttctataaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttattttttttagt---g 5653262  T
Q  207 gttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnctctttct 305  Q
     |||||||| |||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||| ||||||||||||          ||||||||    
T  5653263 cttttttccgtggaaataatggtaatgccagaaaaaaccaaaa-atctgta--ttttcttattaatttcaaaaaatctgcat----aaaaacctctttct 5653355  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| || |||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  5653356 aaaatcatccaaccattttacgcagattgagccataataaacccgttgaacacagtaacccta 5653418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 18532234 - 18532576
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18532234 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 18532333  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||||||||||   |||||||||| | ||  || ||||||| ||||| ||||||||||||| ||||||||||| ||||||  | |    ||||||    
T  18532334 atattttctataaggg-catgtttgtttcagcatcgccgttattaacaaaaa-atcgtcgtttctttcacggctttcattttttagtgct----tttttt 18532427  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcat 313  Q
     |||||||||||||||||| |||||||||||| |||| ||||||  ||||||||||||||||||| ||||||||          |||||||| |||||||    
T  18532428 tcttggaaataatggtaatgccagaaaaaacc-aaacatctgta--ttttcttattaatttcaaatatctgcat---aaaaaacctctttctcaaatcat 18532521  T
Q  314 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    | |  |||| || ||||||||| ||||||||||||| |||  |||||||| ||||    
T  18532522 ccagccattttacgcagattgagccataataaacccgttgggcacagtaacccta 18532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 5468831 - 5469181
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5468831 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5468929  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta--tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    ||||   ||||    
T  5468930 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttttttttttaagggttt 5469024  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    ||  |||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||         || ||||||||||    
T  5469025 ttctcttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatgaaaaaaaaactatttctaaaat 5469123  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5469124 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5469181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 51783868 - 51784216
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  51783868 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 51783966  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |   |||||||    
T  51783967 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttaagtgttttt 51784061  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||         || ||||||||||||    
T  51784062 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatgaaaaagaaactatttctaaaatca 51784160  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  51784161 tccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 51784216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 19696338 - 19696684
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttg-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||    
T  19696338 cattccttcaatcatgcatgtttccgcataatgtgtcttgttgcttaagtgttttgttttttcaaaataacaatcctctcgctctgcccgaagcgacagt 19696437  T
Q  115 gata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||| ||||||||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | |||||  |||     ||||     
T  19696438 gatattttctataaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttattttttttagt---gcttttc 19696531  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc---aaaaatctgcatgnnnnnnnnnctctttctaaaa 309  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||   ||||||||||||          ||||||||||||    
T  19696532 tccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaaatctgcat----aaaaacctctttctaaaa 19696625  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| || |||| || ||||||||||||||||||||||| |||  |||||||| ||||    
T  19696626 tcatccaaccattttacgcagattgaaccataataaacccgttgggcacagtaacccta 19696684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 5713909 - 5714191
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5713909 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5714008  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |           
T  5714009 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 5714105  T
Q  202 -tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
     ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5714106 ttttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5714191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 5724819 - 5725101
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5724819 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5724918  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |           
T  5724919 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 5725015  T
Q  202 -tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
     ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5725016 ttttttatttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5725101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 5767549 - 5767267
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5767549 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 5767450  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |           
T  5767449 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 5767353  T
Q  202 -tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
     ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  5767352 ttttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 5767267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 4418765 - 4419110
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  4418765 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4418864  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    |||||     ||  ||  |||    
T  4418865 atattttctgtaaggg-cgtgtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgact---gctttt-----ttagtgccttt 4418954  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
    | |||||||| ||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  4418955 ttcttggaaaaaatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcatgaaaaaacaactctttctaaaatca 4419052  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4419053 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4419110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 7075058 - 7075402
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||| ||||||||||||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7075058 cattccttcgatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7075156  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||| || |||||||||| | || ||     ||||||     ||  |||||    
T  7075157 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcgcgactgctttttttta----gtaccttttt 7075250  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
    | |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  7075251 t-cttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatca 7075346  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7075347 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7075402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 7998408 - 7998752
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7998408 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998506  T
Q  116 at-atttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||  ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  7998507 atgttttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 7998598  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  7998599 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 7998696  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7998697 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 7998752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 5594769 - 5594424
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  5594769 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 5594671  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||| ||||||||||| ||   ||| |||    |||| ||||||    
T  5594670 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcatttcttccacgact---actcttt----tttagtgtttt 5594580  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaat 310  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||||    
T  5594579 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaat 5594482  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5594481 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5594424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 18244585 - 18244934
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18244585 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18244683  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| || |   ||||||  |      |||||    
T  18244684 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactatttttttttagtg-----cttttt 18244776  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             |||||||||||    
T  18244777 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaa 18244874  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18244875 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18244934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 36995612 - 36995265
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  36995612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 36995514  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcac-tttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||| |||    ||||||    
T  36995513 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttaag----tgtttt 36995423  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttctaaa 308  Q
    | |||||||||  |||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||            |||||||||||    
T  36995422 tcccttggaaacgatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaa 36995325  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  36995324 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 36995265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 370
Target Start/End: Complemental strand, 11108761 - 11108417
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  11108761 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 11108663  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   ||||||   |||     |||||    
T  11108662 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttt---agt---gcttttt 11108574  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  11108573 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 11108476  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  11108475 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 11108417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 368
Target Start/End: Complemental strand, 17983361 - 17983016
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||     
T  17983361 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 17983263  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcc-ttg 218  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||  |  |||||  |||   | |||||||| |||    
T  17983262 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgacta-ctttttttttagtgctttttttttcccttg 17983166  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn--ctctttctaaaatcatcta 316  Q
    |||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||           ||||||||||||||||| |    
T  17983165 gaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaatcatcca 17983068  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  17983067 atcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 17983016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 20575259 - 20574910
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  20575259 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 20575161  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   ||||||||||||||||| ||   |||||||    |||| || |||    
T  20575160 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatt-tcgtcgtttcttccacgact---acttttttt--tttagtgcttt 20575068  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  20575067 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 20574970  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||| | |||||||||||||||||| ||||||||||||||||||    
T  20574969 atcatccaatcattatatgctggttgaaccataataaacccgttgaacacagtaatccta 20574910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 17993360 - 17993072
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17993360 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 17993261  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtattcca-ttattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |           
T  17993260 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgcagttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 17993164  T
Q  202 -------tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
           ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  17993163 ttttttttttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 17993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 21676539 - 21676896
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  21676539 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21676637  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  21676638 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 21676728  T
Q  211 tttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---------nnnnnnnnnctc 300  Q
    || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||                  |||    
T  21676729 ttcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactc 21676828  T
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21676829 tttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21676896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 4626626 - 4626994
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  4626626 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 4626725  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag----- 201  Q
    ||  |||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | |||||  ||         
T  4626726 gacggtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttattttttttagttctt 4626822  T
Q  202 tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnn 295  Q
    ||| | ||||||  ||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                  
T  4626823 ttttttttttttttttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaa 4626921  T
Q  296 nnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
      |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  4626922 accattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 4626994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 5015558 - 5015907
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||| ||||||||||||| ||| || ||||    
T  5015558 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcatctcgctctgcccaaagagagagtg 5015656  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt---t 209  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||  ||   |    
T  5015657 atattttctgtaagggcgt-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttctttttttagtgctt 5015751  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaa 309  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||    
T  5015752 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaa 5015848  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5015849 ccatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5015907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 28023121 - 28023475
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28023121 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28023219  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg-tttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |   || ||||    
T  28023220 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttttttttacttgctttt 28023314  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg------nnnnnnnnnctctttct 305  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||               || |||||    
T  28023315 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactttttct 28023412  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28023413 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28023475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 47025299 - 47025646
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  47025299 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 47025397  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg-tttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    ||  || ||||    
T  47025398 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----ttggtgctttt 47025488  T
Q  212 ttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    | ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  47025489 tcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 47025586  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  47025587 atcatccaagcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 47025646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 24330005 - 24330356
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24330005 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24330103  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  24330104 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 24330194  T
Q  211 tttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttc 304  Q
    || ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||              |||||||    
T  24330195 ttcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttc 24330292  T
Q  305 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24330293 taaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 24330356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 365
Target Start/End: Complemental strand, 22869268 - 22868918
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| |||||| ||||    
T  22869268 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22869170  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--tt 209  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  22869169 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 22869078  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctcttt 303  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||      |         ||||||    
T  22869077 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaagaaaaaaaaactcttt 22868980  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22868979 ctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 22868918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 365
Target Start/End: Complemental strand, 22884327 - 22883977
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| |||||| ||||    
T  22884327 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagagtg 22884229  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--tt 209  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  22884228 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 22884137  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctcttt 303  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||      |         ||||||    
T  22884136 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaagaaaaaaaaactcttt 22884039  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  22884038 ctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 22883977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 48467773 - 48468120
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  48467773 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 48467871  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcac-tttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||| ||||     ||||    
T  48467872 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttaagt---gctttt 48467963  T
Q  212 ttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    | ||||||||| ||||||||| |||| ||||||||||||||| ||||  ||||||||||||||||||||||| |||||          ||||||||||||    
T  48467964 tcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatccgcatgaaaaaaaaaactctttctaaaa 48468061  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  48468062 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 48468120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 4345099 - 4344743
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4345099 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4345001  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||     ||||| |||    |||||||    
T  4345000 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttttttaag----tgttttt 4344907  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----------nnnnnnnnnctctt 302  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                   |||||    
T  4344906 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctt 4344809  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4344808 tctaaaatcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4344743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 28341025 - 28341370
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| || ||| ||||    
T  28341025 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaaacgagagtg 28341124  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  28341125 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 28341216  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| |||||||||||||||| |||||||  |||||||||||||||| ||||||||||||         |||||||||||||||    
T  28341217 cccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgta--ttttcttattaatttc-aaaatctgcatgaaaaaaaaactctttctaaaatca 28341313  T
Q  313 t-ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    | | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28341314 tccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 10397979 - 10398337
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  10397979 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 10398077  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  10398078 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 10398168  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-------------nnnnnnnnn 297  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                          
T  10398169 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaaaaa 10398266  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10398267 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10398337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 18227037 - 18227389
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18227037 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18227135  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  18227136 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 18227226  T
Q  212 tt--ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn------ctcttt 303  Q
    ||  ||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||               ||||||    
T  18227227 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaacctgcatgaaaaaaaaaaaaaaactcttt 18227324  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18227325 ctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18227389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 10644923 - 10645266
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||    
T  10644923 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 10645021  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttttcctt 217  Q
    || ||| ||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || ||||| ||||    
T  10645022 ctgtaaagg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttagtgctttttccctt 10645114  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttctaaaatcatc 314  Q
    ||||| ||||||||| ||||||||||||||||| | ||||  |||||||||||||||||||||||||||||            |||||||||||||||||    
T  10645115 ggaaacaatggtaatgccagaaaaaaccaaaacatttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatcatc 10645212  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10645213 caatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10645266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 28114366 - 28114021
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||| ||||||| |||  ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| | |||| ||||    
T  28114366 cattccttcaatcatgcatatttccgagtaacgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaatgcgagagtg 28114267  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || || ||||||||  | |||||||||| |||| ||  |  |||||    |||| ||  ||    
T  28114266 atattttctgtaagggcgt-gtttgtttcggcattgccgttgatgaataaaaa--ttgtcgtttctttcacgactgcc--ttttt----tttagtgcctt 28114176  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    || |||||||| ||||||||| |||||||||||||||  |||||||||||  |||||||||||||||||||||||||         | ||||||||||||    
T  28114175 tttcttggaaaaaatggtaatgccagaaaaaaccaaacagtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaacaaccctttctaaaatc 28114078  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28114077 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28114021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 20067896 - 20068232
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| |  |||||||||| ||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  20067896 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 20067995  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||   |||||||||||| ||| || || ||||||||||| || |||||||| | |||| || |   |||||  ||| | | ||||| ||||||    
T  20067996 ctgtaaggg-catgtttgtttcggcattgccgttgattaataaaaa-attgtcgtttccttcacgactgt---tttttttagtgtct-tttttcccttgg 20068089  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatc 319  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| || |    
T  20068090 aaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaacc 20068184  T
Q  320 attatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  20068185 attttacgcagattgaactataatgaacccgttgggcacagtaatcct 20068232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 35882619 - 35882954
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  35882619 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 35882718  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| | | |  |||||  ||  |   |||||||||||    
T  35882719 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgac-tgctttttttttag--tgccttttttccttg 35882814  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  35882815 gaaataatggtaatgccaaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaac 35882909  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  35882910 cattttacgcagattgaactataataaacccgttgggcacagtaa 35882954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 5607734 - 5607381
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| |||| |||||||| | || |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  5607734 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 5607636  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||||| |||||||| ||   |||||||    |||| || |||    
T  5607635 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgttccttccacgact---acttttt---ttttagtgcttt 5607544  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-------nnnnnnnnnctcttt 303  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||| ||||||||||||                ||||||    
T  5607543 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttc-aaaatctgcatgaaaaaaaaaaaaaaaactcttt 5607447  T
Q  304 ctaaaatcat-ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||| | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5607446 ctaaaatcatccaaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5607381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 6203759 - 6204091
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||  |||||||||    
T  6203759 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagggtgatattt 6203858  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||  |||  |   ||||||||||    
T  6203859 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---ctttttttagt--accatttttccttg 6203951  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  6203952 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 6204046  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  6204047 cattttacgcagattgaactataataaacccgttgggcacagtaa 6204091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 32441007 - 32441339
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  32441007 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 32441106  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | |||||||||| |||| ||    |||||| | ||   | ||||| |||||    
T  32441107 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa--ttgtcgtttctttcacgactg---ctttttta-gtgcct-tttttcccttg 32441198  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  32441199 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 32441294  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  32441295 cattttacgcagattgaactataataaacccgttgggcacagtaa 32441339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 4723484 - 4723823
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| | ||||||||    
T  4723484 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagaatgatattt 4723583  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     |||||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||  |  |||||  |||  |  |||||| ||||    
T  4723584 tctataagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg-ctttttttttagt--acctttttttcttg 4723678  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  4723679 gaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaccctctttctaaaatcatccaac 4723774  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  4723775 cattttacgcagattgaactataataaacccgttgggcacagtaatcct 4723823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 4795037 - 4794703
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  4795037 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 4794938  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  4794937 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 4794846  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| ||||||||||||| |||    
T  4794845 gaaataatggtaatgcca-aaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctccttctaaaatcatccaat 4794752  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  4794751 cattttacgcagattgaactataataaacccgttgggcacagtaatcct 4794703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 8287876 - 8287542
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  8287876 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 8287777  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||     ||||||  |  |    ||||||||||    
T  8287776 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactgcttttttttagcgcct----tttttccttg 8287683  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||          ||||||||||||||||| ||     
T  8287682 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcgaaaatctgcat--aaaaaaacctctttctaaaatcatccaac 8287587  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || |||||||| || ||||||||||| ||| |||||||||    
T  8287586 cattttacgcagattggactataataaacccgttggacacagtaa 8287542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 8297825 - 8298159
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| |||| |||||||| |||||| ||||||||||    
T  8297825 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcactctgcccaaagcgagagtgatattt 8297924  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||  | || ||| |    |   |||||||||||    
T  8297925 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg-ctctgttttag---tgccttttttccttg 8298018  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  8298019 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 8298114  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  8298115 cattttacgcagattgaactataataaacccgttgggcacagtaa 8298159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 15891111 - 15890777
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||  || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||| ||| |||||| ||||||||||    
T  15891111 tcaatcatgcatgtttttgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctacccaaagcgagagtgatattt 15891012  T
Q  122 -ctataagggttttgtttgtttcggtatt--ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| |||  |  | ||||||||||| || |||||||||| |||| ||   | ||||   |||     |||||||||||    
T  15891011 tctgtaagggcat-gtttgtttcggcattgtcgttaattaataaaaaaattgtcgtttctttcacgactgctattttt---agtgc---ttttttccttg 15890919  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  15890918 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat-aaaaaaaacctctttctaaaatcatccaac 15890822  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  15890821 cattttacgcagattgaactataataaacccgttgggcacagtaa 15890777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 31962885 - 31962617
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31962885 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31962786  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||     ||||| ||||     |||||    
T  31962785 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttttttaagt---gcttttt 31962691  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
     ||||||||| ||||||||| |||||||||||||||| |||||||  |||||||||||||||||||||||||||||    
T  31962690 cccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgta--ttttcttattaatttcaaaaatctgcatg 31962617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 43 - 280
Target Start/End: Complemental strand, 16622870 - 16622643
Alignment:
Q  43 ataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tttctataagggttttgtttgtt 141  Q
    ||||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||   ||||||||    
T  16622870 ataatgtgtcttgttgcttaagttttgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattttctgtaaggg-catgtttgtt 16622773  T
Q  142 tcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttggaaataatggtaataccagaaa 240  Q
    |||| ||  || ||||||||||||  ||||||||||||| |||| |||| | ||||   |||     ||||||||| ||||||||||||||| |||||||    
T  16622772 tcggcatcgccgttattaataaaa--atcgtcgtttctttcacgacttttattttt---agt---gcttttttcctcggaaataatggtaatgccagaaa 16622681  T
Q  241 aaaccaaaacgtctgtattttttcttattaatttcaaaaa 280  Q
    |||||||||| ||  ||| |||||||||||||||||||||    
T  16622680 aaaccaaaacatc--tatattttcttattaatttcaaaaa 16622643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 15739499 - 15739166
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgata-t 119  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||  ||||||||||||||||||||||||||| |||||| ||||||| |    
T  15739499 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 15739400  T
Q  120 ttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcctt 217  Q
    |||| ||||||   |||||||||||| ||| || || |||||| |||| || |||||||||| |||| ||    ||||||  ||  ||  |||||| |||    
T  15739399 ttctgtaaggg-catgtttgtttcggcattgccgttgattaatgaaaa-attgtcgtttctttcacgact---gctttttttag--tacctttttttctt 15739307  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||| |||          ||||||||||||||||| ||    
T  15739306 ggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctacat---aaaaaccctctttctaaaatcatccaa 15739212  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     |||| || |||||| |||| ||||||||||| |||  ||||||||    
T  15739211 ccattttacgcagatcgaactataataaacccgttgggcacagtaa 15739166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 29147160 - 29146828
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||| ||||||||| |||||| ||||||| ||    
T  29147160 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatattt 29147061  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt--cct 216  Q
    ||| ||||||   |||||||||||| ||| ||||| |||||||||||  | ||||||||||||||| ||    |||||     ||  || |||||  |||    
T  29147060 tctgtaaggg-catgtttgtttcggcattgccattgattaataaaaattttgtcgtttcttccacgact---gctttt-----ttagtgctttttcccct 29146970  T
Q  217 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||||| |||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |    
T  29146969 tggaaatgatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatcca 29146875  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | | || || ||||||||||| ||||||||||| |||  ||||||||    
T  29146874 accgttttacgcagattgaactataataaacccgttgggcacagtaa 29146828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 18275457 - 18275120
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  18275457 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18275358  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcctt- 217  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||  ||   |||||||    |||| || ||||||| |     
T  18275357 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacaact---acttttt----tttagtgctttttcccta 18275267  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatcatcta 316  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||| ||||||||| |    
T  18275266 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat---aaaacccctctttctaaaaatcatcca 18275171  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    | |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  18275170 accattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18275120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 18290758 - 18290421
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  18290758 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18290659  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcctt- 217  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||  ||   |||||||    |||| || ||||||| |     
T  18290658 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacaact---acttttt----tttagtgctttttcccta 18290568  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatcatcta 316  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||| ||||||||| |    
T  18290567 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaaatcatcca 18290472  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    | |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  18290471 accattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18290421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 18306059 - 18305722
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  18306059 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 18305960  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcctt- 217  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||  ||   |||||||    |||| || ||||||| |     
T  18305959 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacaact---acttttt----tttagtgctttttcccta 18305869  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatcatcta 316  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||| ||||||||| |    
T  18305868 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaaatcatcca 18305773  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    | |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  18305772 accattttacgcagattgaactataatgaacccgttgggcacagtaatcct 18305722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 22385983 - 22385650
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||  ||||||||||||| ||||||||||||| |||||| |||||||||    
T  22385983 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatt 22385884  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcctt 217  Q
    | || ||||||  | ||||||||||  ||| || || |||||| ||||  | ||||||||||||| | || |   |||||  |||     ||||| ||||    
T  22385883 ttctgtaagggcat-gtttgtttcgacattgccgttgattaatgaaaattttgtcgtttcttccatgactgt---tttttttagtgc---tttttccctt 22385791  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||          ||||||||||||||||| ||    
T  22385790 ggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatatgcat---aaaacccctctttctaaaatcatccaa 22385696  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22385695 ccattttacgcagattgaactataataaacccgttgggcacagtaa 22385650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 18053115 - 18053450
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    |||| |||||||||||| || |||| |   ||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  18053115 tcaaccatgcatgtttctgagtaatatacgttgttgcttaagtatcttgttttttcaaaataacaatcttctcgctctgcccaaagcgagagtgatattt 18053214  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  18053215 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 18053306  T
Q  219 gaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||||||||||||| |||| ||||||||||||| ||  ||| ||||||||||||||| ||||||||||||          ||| ||||||||||||| ||    
T  18053307 gaaataatggtaatgccagaaaaaaaccaaaacatc--tatattttcttattaattttaaaaatctgcataaaaaaaaacctccttctaaaatcatccaa 18053404  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||| || ||||||||||| ||||||||||| |||  ||||||||    
T  18053405 tcattttacgcagattgaactataataaacccgttgggcacagtaa 18053450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 287
Target Start/End: Original strand, 18332481 - 18332739
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||| ||| | ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||     
T  18332481 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtatcttgtttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatatttt 18332580  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| ||||||    
T  18332581 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttgg 18332672  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaa-tttcaaaaatctgcat 287  Q
    ||||||||||||| ||||||||||||||||  ||||||  |||||||||||| ||| ||||||||||||    
T  18332673 aaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaattttgaaaaatctgcat 18332739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 298 - 367
Target Start/End: Complemental strand, 31962593 - 31962523
Alignment:
Q  298 ctctttctaaaa-tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  31962593 ctctttctaaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 31962523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 5714215 - 5714282
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5714215 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5714282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 5725125 - 5725192
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5725125 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5725192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 5767243 - 5767176
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  5767243 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 5767176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 17993049 - 17992982
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  17993049 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 17992982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 32293770 - 32293837
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  32293770 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 32293837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 18332760 - 18332825
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||||||||||||||| ||||||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  18332760 ctctttctaaaatcatccaatcattttacgcagattgaactataatgaacccgttgggcacagtaa 18332825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 332 - 365
Target Start/End: Complemental strand, 6540845 - 6540812
Alignment:
Q  332 ttgaaccataataaacccattgaacacagtaatc 365  Q
    |||||||||||||||||| |||||||||||||||    
T  6540845 ttgaaccataataaacccgttgaacacagtaatc 6540812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 24 - 349
Target Start/End: Original strand, 1902165 - 1902479
Alignment:
Q  24 caatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tttc 122  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  1902165 caatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttccaaataacaatcctctcgctctgcccgaagcgaaagtgatattttc 1902264  T
Q  123 tataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttggaa 221  Q
    | ||||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| ||||||||| | ||||||     ||  ||||||||||||||    
T  1902265 tgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacggcttttatttttta----gtactttttttccttggaa 1902357  T
Q  222 ataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatcat 321  Q
    ||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| || |||    
T  1902358 ataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat----aaaaacctctttctaaaatcatccaaccat 1902451  T
Q  322 tatatgcagattgaaccataataaaccc 349  Q
    | || ||||||||| |||||||||||||    
T  1902452 tttacgcagattgagccataataaaccc 1902479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 16 - 346
Target Start/End: Original strand, 15229769 - 15230095
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15229769 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15229868  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaat---aaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||   ||||| ||||||||||||| ||||||||| | |||||  |||     |||    
T  15229869 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaaaaaaaatcgtcgtttctttcacggcttttattttttttagt---gcttt 15229964  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||    
T  15229965 tttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaat 15230059  T
Q  311 catctaatcattatatgcagattgaaccataataaa 346  Q
    |||| || |||| || ||||||||| ||||||||||    
T  15230060 catccaaccattttacgcagattgagccataataaa 15230095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 15283299 - 15282952
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15283299 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 15283200  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||| ||||||||||||| ||||||||| |  ||||  |||   | ||||||    
T  15283199 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaaa-atcgtcgtttctttcacggcttttaaatttt--agtgcttttttttt 15283104  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc---aaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||   ||||||||||||          |||||||||||||    
T  15283103 ccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaaatctgcat----aaaaacctctttctaaaat 15283010  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| || |||| || ||||||||| ||||| ||||||| |||  |||||||| ||||    
T  15283009 catccaaccattttacgcagattgagccatagtaaacccgttgggcacagtaacccta 15282952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 6571760 - 6572103
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  6571760 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 6571859  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcc- 215  Q
    | || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   ||||||     |||| || |||||||     
T  6571860 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttc----tttagtgctttttccc 6571950  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||     
T  6571951 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatcatcc 6572050  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  6572051 aatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 6572103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 33672169 - 33671824
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| || | |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  33672169 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagcgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33672071  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  33672070 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 33671980  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  33671979 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 33671882  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33671881 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33671824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 39852538 - 39852882
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  39852538 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39852636  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   ||| |||  |||     |||||    
T  39852637 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttcttccacgact---actctttttagt---gcttttt 39852728  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  39852729 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatca 39852826  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  39852827 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39852882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 54835287 - 54835636
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||||||||    
T  54835287 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgaaagtg 54835386  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || || |||||||| || |||||||||| |||| ||    ||||||    ||  ||  |||    
T  54835387 atattttctgtaaggg-catgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgact---gctttttttttttagtgccttt 54835482  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
    | |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  54835483 ttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 54835579  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  54835580 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 54835636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 27161687 - 27161341
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27161687 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27161589  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta--tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || | |||| ||||  | ||||||||||||||| ||   |||||||    ||||  || ||    
T  27161588 atattttctgtaaggg-catgtttgtttcggcattgccgttgactaat-aaaattttgtcgtttcttccacgact---acttttt----tttaagtgctt 27161498  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  27161497 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 27161400  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27161399 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27161341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 14100441 - 14100788
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  14100441 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 14100539  T
Q  116 at-atttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||  ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  14100540 atgttttctgtaaggg-cgtgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttagtgcttt 14100632  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  14100633 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 14100730  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| ||||| |||||||||||| ||||||||||||||||||    
T  14100731 catccaatcattatatgcaggttgaatcataataaacccgttgaacacagtaatccta 14100788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 18798984 - 18798638
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  18798984 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 18798886  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  18798885 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 18798795  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| |||||||||||||||||||| |||  |||||||||||||||||||||||||||||          ||||||||||||    
T  18798794 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtccgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 18798697  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18798696 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18798638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 21971601 - 21971943
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||| ||||||||| |||||| |||     
T  21971601 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctcttgctctgcccaaagcgagagta 21971699  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    || ||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||||||    
T  21971700 atgttttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgtttt 21971790  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         | |||||||||||    
T  21971791 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaccctttctaaaat 21971888  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  21971889 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 21971943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 40104009 - 40103661
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  40104009 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40103911  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  40103910 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttttttttttagtgcttt 40103816  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  40103815 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaat 40103719  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||  ||||||||| ||||||||||||||||||    
T  40103718 catccaatcattatatgcaggttgaaccccaataaacccgttgaacacagtaatccta 40103661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 5007773 - 5008122
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  5007773 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 5007872  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    |||| ||  |    
T  5007873 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gcttttt---ttttagtgcct 5007963  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  5007964 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctctttctaaa 5008060  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  5008061 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 5008122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 278
Target Start/End: Complemental strand, 15389755 - 15389495
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||| || ||||||||||  ||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15389755 catcaacattcctttaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 15389656  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggc-tttcactttttaaagtttatg 207  Q
      ||||||||||||  ||||| | |||||||||||| ||  || ||||||||||||  ||||||||||||| |||||| ||| ||||||   |||         
T  15389655 ggagtgatatttctgaaaggg-tgtgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacggctttttactttt---agt---gc 15389565  T
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaa 278  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| ||||    
T  15389564 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaattacaaa 15389495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 24460140 - 24459851
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  24460140 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 24460041  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag----- 201  Q
    || ||||||| ||||| ||||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |         
T  24460040 gacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttt 24459944  T
Q  202 --------tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
            ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  24459943 tttttttttttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 24459851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 31124889 - 31124536
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  31124889 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31124791  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaa-agtttatgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||   |||   | ||||    
T  31124790 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttagtgcttttttt 31124696  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttcta 306  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              |  ||||||    
T  31124695 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaccattttcta 31124598  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  31124597 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 31124536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 30755654 - 30756002
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||| ||||| |||| ||||||||||||| || | ||||||||  |||||||||||| ||||||||||||| |||||| ||||    
T  30755654 cattccttcaatcatgcatgtgtccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcatctcgctctgcccaaagcgagagtg 30755753  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||     |  | |||||    
T  30755754 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttttttagtgcttttttt 30755848  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc--aaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
     ||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||||||||  |||||||||||||          ||||| ||||||    
T  30755849 cccttggaaacaatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaatctgcatgaaaaaaaaaactcttcctaaaa 30755946  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  30755947 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 30756002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 24590719 - 24590386
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  24590719 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 24590620  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||   |||||||||||| ||| || || ||||||||||  || |||||||||| |||| || |   |||||  ||  ||  |||||| |||||    
T  24590619 ctgtaaggg-catgtttgtttcggcattgccgttgattaataaaa--attgtcgtttctttcacgactgt---tttttttag--tacctttttt-cttgg 24590529  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatc 319  Q
    ||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| ||||||||||||| || |    
T  24590528 aaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctccttctaaaatcatccaacc 24590434  T
Q  320 attatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  24590433 attttacgcagattgaactataataaacccgttgggcacagtaatcct 24590386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 34187324 - 34186989
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||    
T  34187324 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtattttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 34187225  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||   |||||||||| | ||| || || ||||||||||  || |||||||||| |||| ||     |||||  || |    ||||| ||||||    
T  34187224 ctgtaaggg-catgtttgtttcagcattgccgttgattaataaaa--attgtcgtttctttcacgactgcttttttttttag-taccctttttcccttgg 34187129  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatc 319  Q
    ||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| || |    
T  34187128 aaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaacc 34187033  T
Q  320 attatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||| || ||||||||||| ||||||||||| |||  ||||||||    
T  34187032 attttacgcagattgaactataataaacccgttgggcacagtaa 34186989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 14761668 - 14761331
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||  || |||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  14761668 tcaatcatgcatgtttttgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 14761569  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcc-tt 217  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || ||||||| ||    
T  14761568 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgctttttccctt 14761478  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatcatcta 316  Q
    ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||          |||||||| ||||||||| |    
T  14761477 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaaatcatcca 14761382  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    | |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  14761381 accattttacgcagattgaactataatgaacccgttgggcacagtaatcct 14761331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 14666925 - 14667256
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||    
T  14666925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 14667024  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||| ||||||   |||||||||||| ||| || || |||||||||||  | |||| ||||||| || ||    ||||||  |||     ||||| ||| |    
T  14667025 tctgtaaggg-catgtttgtttcggcattgccgttgattaataaaaattttgtcgattcttccgcgact---gcttttt-tagt---gctttttccctcg 14667116  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  14667117 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaac 14667211  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  14667212 cattttacgcagattgaactataataaacccgttgggcacagtaa 14667256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 17014950 - 17015286
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| | ||||| ||    
T  17014950 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagattgatattt 17015049  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaat-aaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcctt 217  Q
    ||| ||||||   |||||||||||| ||| ||||| |||||| ||||| || |||||||||| |||| ||    ||||||  |||   | ||||||||||    
T  17015050 tctgtaaggg-catgtttgtttcggcattgccattgattaataaaaaaaattgtcgtttctttcacgact---gctttttttagtgcct-ttttttcctt 17015144  T
Q  218 ggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||||||||||||| |||| ||||||||||||  ||||||  ||||||||||||||||||||||||||||          || |||||||||||||| |    
T  17015145 ggaaataatggtaatgccagaaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctatttctaaaatcatcca 17015239  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  17015240 accattttacgcagattgaactataataaacccgttgggcacagtaa 17015286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 24114569 - 24114906
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||| ||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  24114569 tcaatcatgcatgtttctgagtaatataccttgttgcctaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24114668  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||  |||      ||||| ||||    
T  24114669 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaaattgtcgtttctttcacgact---gctttttttagt---gccttttttcttg 24114761  T
Q  219 gaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||    
T  24114762 gaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaa 24114856  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
     |||  || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  24114857 ccatcttacgcagattgaactataatgaacccgttgggcacagtaatcct 24114906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 36342879 - 36342542
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||| |||  ||||||||| ||||||||||||||||||||||||||| |||||| | ||||| ||    
T  36342879 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttttcaaaataacaatcctctcgctctgcccaaagcgagaatgatattt 36342780  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||  |||     ||||| |||||    
T  36342779 tctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---accttttttagt---gctttttcccttg 36342688  T
Q  219 gaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||| ||||||||| |||| ||||||||||||||||| || |||||||| ||||||||||||||||||||          |||||||||||| |||| ||    
T  36342687 gaaacaatggtaatgccagaaaaaaaccaaaacgtctata-tttttcttgttaatttcaaaaatctgcat---aaaaaccctctttctaaaaacatccaa 36342592  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
     |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  36342591 ccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 36342542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 304 - 368
Target Start/End: Complemental strand, 18315266 - 18315202
Alignment:
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||  ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18315266 ctaaaatcatacaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18315202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 24459829 - 24459762
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  24459829 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 24459762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 301 - 370
Target Start/End: Complemental strand, 15389469 - 15389400
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||| ||||| ||||||    
T  15389469 tttctaaaatcattcaaccattttatgcagtttgaaccataataaacccgttgaacatagtaaccctatg 15389400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 5e-72; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 34157727 - 34158091
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  34157727 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 34157826  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag-----tt 203  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |     ||    
T  34157827 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 34157923  T
Q  204 tatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnct 299  Q
    | | |||||| |||||||||||||||||||||||||||||||||||| ||| |||||||| |||| ||||||||| | ||||||    |         |     
T  34157924 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatctttatttttt-ttatcaatttcaaagaactgcataaaagaaaaaaaacca 34158022  T
Q  300 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  34158023 ttttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 34158091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 16164362 - 16164727
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  16164362 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 16164461  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------t 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |      |    
T  16164462 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 16164558  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnc 298  Q
    || | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |         |    
T  16164559 ttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaacc 16164657  T
Q  299 tctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
      |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  16164658 attttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 16164727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 22925510 - 22925145
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22925510 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 22925411  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta---aagttta 205  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||   |  |||     
T  22925410 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 22925314  T
Q  206 tgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-------gnnnnnnnnnc 298  Q
    | | |||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                 |    
T  22925313 tttctttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaacc 22925215  T
Q  299 tctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
      |||||||||||||  ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  22925214 attttctaaaatcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 22925145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 27393440 - 27393708
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||| |||||||||||||  |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27393440 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 27393539  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtatt-ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||| || ||||||||||||  ||||||||||||| ||||||||| | ||||   |||     |    
T  27393540 aaagtgatatttctggaaggg-cgtgtttgtttcggcattgccgttattaataaaa--atcgtcgtttctttcacggcttttattttt---agt---gct 27393630  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  27393631 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcat 27393708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 13934904 - 13934560
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  13934904 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 13934806  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||  |||     |||||    
T  13934805 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgact---actttttttagtgc---ttttt 13934714  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  13934713 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatca 13934616  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  13934615 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 13934560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 37949682 - 37949335
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37949682 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37949584  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  ||||||||||||||||| ||  |  ||||||| |      |||||    
T  37949583 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaatttcgtcgtttcttccacgactacctttttttaatg-----cttttt 37949491  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||||    
T  37949490 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaat 37949393  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37949392 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37949335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 3785371 - 3785740
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3785371 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 3785470  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |           
T  3785471 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 3785567  T
Q  202 tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-------gnnnnnn 294  Q
    ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                  
T  3785568 tttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaa 3785666  T
Q  295 nnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
       |  |||||||||||||  ||||||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  3785667 aaccattttctaaaatcattcaatcattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 3785740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 12714962 - 12714614
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  12714962 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 12714864  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |   |||||||    
T  12714863 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttaagtgttttt 12714769  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||         || ||||||||||||    
T  12714768 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtat-ttttcttattaatttcaaaaatctgcatgaaaaagaaactatttctaaaatca 12714670  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  12714669 tccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 12714614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 40235399 - 40235739
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    |||||||||||| |||| || |||| |  |||||||||||||||| ||||||||  ||||||||||||||||||||||||||| ||||||||||||||||    
T  40235399 tcaatcatgcatatttctgagtaatataccttgttgcttaagtgtcttgtttttttcaaaataacaatcctctcgctctgcccaaagcgaaagtgatatt 40235498  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttcc- 215  Q
    | || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   ||||||     |||| || |||||||     
T  40235499 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttc----tttagtgctttttccc 40235589  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||     
T  40235590 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---aaaaaactctttctaaaatcatcc 40235686  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40235687 aatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40235739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 21701524 - 21701183
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21701524 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 21701425  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| |||| |||| | ||||||       || |||||    
T  21701424 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacgactttta-ttttta------gtgcttttt 21701335  T
Q  214 ccttggaaataatggtaataccag--aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
     |||||||||||||||||| ||||  ||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||    
T  21701334 -cttggaaataatggtaatgccagaaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctctttctaaaatc 21701240  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| || |||| || ||||||| ||||||||||||||| |||  |||||||| ||||    
T  21701239 atccaaccattttacgcagattaaaccataataaacccgttgggcacagtaacccta 21701183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 9348342 - 9347999
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  9348342 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9348244  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  9348243 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttcttccacgact---actttttttagt---gcttttt 9348152  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     |||||| |||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||         || ||||||||||||    
T  9348151 cccttgggaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatttgcatg-aaaaaaaactttttctaaaatca 9348055  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9348054 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9347999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 34288235 - 34288580
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||| |||| || |||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  34288235 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34288333  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||  || |||||||||| |||| ||    |||||| |  ||  ||  |||    
T  34288334 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaataaaa--attgtcgtttctttcacgact---gctttttta--ttagtgccttt 34288425  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatc 311  Q
    | |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||| ||||||    
T  34288426 ttcttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaaatc 34288523  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34288524 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34288580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 34293295 - 34293640
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||| |||| || |||| |||||||| ||||||||||||||||||||||||||| ||| |||||||    
T  34293295 cattccttcaatcatgcatgtttccgagtaatgtgtctcgttggtttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagagaaagtg 34293393  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||  || |||||||||| |||| ||    |||||| |  ||  ||  |||    
T  34293394 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaataaaa--attgtcgtttctttcacgact---gctttttta--ttagtgccttt 34293485  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatc 311  Q
    | |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||| ||||||    
T  34293486 ttcttggaaaaaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaaatc 34293583  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34293584 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34293640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 27805588 - 27805934
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  27805588 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 27805686  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt--ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| |||  |  | ||||||||||   | ||||||||||||||| ||   |||||||  |||     |||||    
T  27805687 atattttctgtaagggcat-gtttgtttcggcattgncgttgattaataaaacttt-gtcgtttcttccacgact---actttttttagtgc---ttttt 27805778  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaat 310  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||||    
T  27805779 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaat 27805876  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27805877 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27805934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 259113 - 258766
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  259113 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 259015  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  259014 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 258923  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  258922 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 258825  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  258824 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 258766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 12588691 - 12589039
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  12588691 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 12588789  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||  |||     |||||    
T  12588790 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgact---actttttttagtgc---ttttt 12588881  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             |||||||||||    
T  12588882 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaa 12588979  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12588980 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12589039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 16893783 - 16894128
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16893783 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16893881  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  16893882 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 16893972  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  16893973 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 16894070  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16894071 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 280
Target Start/End: Complemental strand, 19454782 - 19454525
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| || | |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  19454782 cattccttcaatcatgcatgtttccgagtagtgtgtcttgttgcttaagtgttctgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 19454683  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||| | ||  || ||||||||||||| |||||||||| || ||||| ||| | ||||||  |      ||||||    
T  19454682 atattttctgtaaggg-catgtttgtttcagcatcgccgttattaataaaaa-atcgtcgtttttttcacggtttttattttttagtg-----ctttttt 19454590  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 280  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  19454589 ccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 19454525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 365
Target Start/End: Original strand, 39891955 - 39892297
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  39891955 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 39892053  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||  |||     |||||    
T  39892054 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---accttttttagt---gcttttt 39892145  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  39892146 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 39892243  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  39892244 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 39892297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 16827698 - 16827352
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16827698 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16827600  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  16827599 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 16827509  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||           |||||||||||    
T  16827508 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 16827411  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  16827410 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 16827352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 34863561 - 34863915
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  34863561 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34863659  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||     |||||    |||| || |||    
T  34863660 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttttttttttttagtgcttt 34863757  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  34863758 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 34863855  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34863856 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34863915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 39050182 - 39049832
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  39050182 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 39050084  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  39050083 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 39049993  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttct 305  Q
    |||| ||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              ||||||||    
T  39049992 ttcccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttct 39049895  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  39049894 aaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 39049832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 365
Target Start/End: Complemental strand, 19414859 - 19414517
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||  || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  19414859 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19414761  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    || ||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||  |||     |||||    
T  19414760 atgttttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttttagtgc---ttttt 19414669  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  19414668 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 19414571  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  19414570 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 19414517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 37927251 - 37927600
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  37927251 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 37927349  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  37927350 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 37927440  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn----ctctttcta 306  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||             |||||||||    
T  37927441 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttcta 37927538  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37927539 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 21675542 - 21675188
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  21675542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 21675444  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  21675443 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 21675353  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---------nnnnnnnnnctct 301  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                  ||||    
T  21675352 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaactct 21675255  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21675254 ttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21675188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 31878162 - 31878517
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  31878162 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 31878260  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacg---gctttcactttttaaagtttatgtt 209  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||||||||||||||    ||||  ||||||  |||     ||    
T  31878261 atattttctgtaaggg-cgtgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttctttttttagt---gctt 31878355  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttc 304  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              |||||||    
T  31878356 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttc 31878453  T
Q  305 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31878454 taaaaccatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31878517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 27119405 - 27119771
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  27119405 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 27119504  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttca-ctttttaaag---- 201  Q
    || ||||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| |  |||||  ||        
T  27119505 gacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttatttttttttagtgct 27119601  T
Q  202 -------tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnn 293  Q
           ||| | ||||||  | ||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||          
T  27119602 ttttttttttttttttttttttgggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaatctgcat---aaa 27119696  T
Q  294 nnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
        |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27119697 aaaccattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27119771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 31890852 - 31890576
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  31890852 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttatgtgttttgtttttcaaaaataacaatcctctcactctgcccgaagc 31890753  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta- 205  Q
    || ||||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | |||||    ||||     
T  31890752 gacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttatttttt---ttttag 31890659  T
Q  206 tg--ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||  |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  31890658 tgcttttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 31890576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 11633545 - 11633197
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  11633545 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11633446  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || || |||||||  || |||||||||| |||| ||    ||||||    |||| ||  ||    
T  11633445 atattttctgtaaggg-cgtgtttgtttcggcattgccgttgatgaataaaa--attgtcgtttctttcacgact---gcttttt----tttagtgcctt 11633356  T
Q  212 ttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttct-a 306  Q
    || |||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||            |||||||| |    
T  11633355 tttcttggaaa-aatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaa 11633259  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  11633258 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11633197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 32051679 - 32052034
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  32051679 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 32051777  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagt-ttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| | | |  |||||  |||  | | ||||    
T  32051778 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgac-tactttttttttagtgctttttttt 32051874  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttcta 306  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              |  ||||||    
T  32051875 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaccattttcta 32051972  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  32051973 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 32052034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 12657430 - 12657762
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| ||||||  |||||||||    
T  12657430 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagcgtgatattt 12657529  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg-ttttttcctt 217  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    |||||     |||||| ||||||||||    
T  12657530 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gctttt-----tttatgcttttttcctt 12657620  T
Q  218 ggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |    
T  12657621 ggaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatcca 12657715  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  12657716 accattttacgcagattgaactataataaacccgttgggcacagtaa 12657762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 121
Target Start/End: Original strand, 5807170 - 5807282
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  5807170 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 5807269  T
Q  109 gaaagtgatattt 121  Q
    || ||||||||||    
T  5807270 gacagtgatattt 5807282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 37377049 - 37377402
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt----caaaataacaatcctctcgctctgcccgaagcgaaagtgata 118  Q
    ||||||||||||||||| || |||| |  |||||||||| |||  |||||||||    ||||||||||||||||||||||||||| |||||| |||||||    
T  37377049 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 37377148  T
Q  119 ttt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcc 215  Q
    ||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||  |||     ||||| ||    
T  37377149 ttttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttttagtgc---tttttccc 37377240  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtatttttt------cttattaatttcaaaaatctgcatgnnnnnnnnn---ctctttcta 306  Q
    ||||||| ||||||||| ||||||||||||||||||||||| ||||||      |||||||||||||||||||||||||            |||||||||    
T  37377241 ttggaaacaatggtaatgccagaaaaaaccaaaacgtctgttttttttttctttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttcta 37377340  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| ||||||||||||||| |||||||||||||||||| ||||| ||||||||||||    
T  37377341 aaatcatccaatcattatatgcaggttgaaccataataaacccgttgaaaacagtaatccta 37377402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 28884102 - 28884437
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||  |||||||||||| ||||||||||||| |||||| ||||||||||    
T  28884102 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 28884201  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | |||||||||| |||| ||    |||||||     ||  |||||| ||||    
T  28884202 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgactg---ctttttag----tacctttttttcttg 28884293  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  28884294 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaac 28884388  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  28884389 cattttacgcagattgaactataataaacccgttgggcacagtaatcct 28884437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 34302827 - 34302715
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    |||||||||||  |||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  34302827 catcatcattccctcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 34302728  T
Q  109 gaaagtgatattt 121  Q
    || ||||||||||    
T  34302727 gacagtgatattt 34302715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 37684269 - 37684004
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37684269 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37684171  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||  |  ||||||  |      |||||    
T  37684170 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactacctttttttagtg-----cttttt 37684078  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37684077 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg 37684004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 37699534 - 37699269
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37699534 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37699436  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||  |  ||||||  |      |||||    
T  37699435 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactacctttttttagtg-----cttttt 37699343  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  37699342 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg 37699269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 23126919 - 23126582
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  23126919 tcaatcatgcatgtttctgagtaatgtaccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 23126820  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttttttcc 215  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||    |||| ||  ||||||||    
T  23126819 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---cttttt----tttagtgccttttttcc 23126729  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||||||||||||| |          |||||||||||||||||     
T  23126728 ttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcgt---aaaaaccctctttctaaaatcatcc 23126634  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  23126633 aaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23126582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 20839789 - 20840139
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  20839789 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 20839888  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-------tcgtcgtttcttccacg---gctttcactttttaaagtttatgt 208  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| |       | |||||||||||||||   |||||   |||||    ||||||     
T  20839889 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaaaaaatgttttgtcgtttcttccacgactgcttttttttttttttttttatgc 20839987  T
Q  209 tttttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaa 307  Q
    ||||||| ||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||    
T  20839988 tttttcccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaccctctttctaa 20840083  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||||| || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  20840084 aatcatccaaccattttacgcagattgaactataatgaacccgttgggcacagtaa 20840139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 27779103 - 27779284
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27779103 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27779202  T
Q  115 gatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta 198  Q
    |||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||    
T  27779203 gatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttta 27779284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 27818861 - 27819042
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  27818861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataaccatcctctcgctctgcccgaagcgaaagt 27818960  T
Q  115 gatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta 198  Q
    |||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||    
T  27818961 gatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttta 27819042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 27432797 - 27432459
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  27432797 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27432698  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-tcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttttcc 215  Q
    ||| ||||||    ||||||||||| ||| || || ||||||||||| | | |||||||||| |||| ||   | |||||    |||| || |||||| |    
T  27432697 tctgtaaggg-cacgtttgtttcggcattgccgttgattaataaaaaaatttgtcgtttctttcacgactgctatttttt---ttttagtgctttttttc 27432602  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  | ||||||||||||||||||||||||||          |||||||||||||||||     
T  27432601 ttggaaataatggtaatgccagaaaaaaccaaaacatctgta--tcttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatcc 27432507  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  27432506 aaccattttacgcagattgaacgataataaacccgttgggcacagtaa 27432459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 208 - 368
Target Start/End: Complemental strand, 34271941 - 34271786
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnctctttcta 306  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||| |||||| ||||||||||||          |||||||||    
T  34271941 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttatcaatttcaaaaaatctgcat----aaaaacctctttcta 34271848  T
Q  307 aaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| || |||| ||  ||||| || ||||||||||||| ||||||||||||| ||||    
T  34271847 aaatcatccaaccattttactcagatggagccataataaacccgttgaacacagtaacccta 34271786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 37683978 - 37683908
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37683978 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37683908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 298 - 368
Target Start/End: Complemental strand, 37699243 - 37699173
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37699243 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37699173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 368
Target Start/End: Original strand, 27779316 - 27779481
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctct 301  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  |    
T  27779316 tttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccatt 27779414  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27779415 ttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27779481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 368
Target Start/End: Original strand, 27819073 - 27819238
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctct 301  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  |    
T  27819073 tttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccatt 27819171  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27819172 ttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27819238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 31890555 - 31890488
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31890555 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31890488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 27393726 - 27393793
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  27393726 tttctaaaatcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagtaacccta 27393793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 137; Significance: 2e-71; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 19658534 - 19658186
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  19658534 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 19658435  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttat 206  Q
    |||||||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | ||||||     |      
T  19658434 gaaagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgactttta-ttttta-----ttg 19658344  T
Q  207 gttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnctctttct 305  Q
     ||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| ||||||||||||          ||||||||    
T  19658343 cttttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaaatctgcat----aaaaacctctttct 19658249  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| || |||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  19658248 aaaatcatccaaccattttacgcagattgagccataataaacccgttgaacacagtaacccta 19658186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 18711350 - 18711715
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18711350 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 18711449  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag-----tt 203  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |     ||    
T  18711450 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 18711546  T
Q  204 tatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnc 298  Q
    | | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||     |         |    
T  18711547 tttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaacc 18711645  T
Q  299 tctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
      |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  18711646 attttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 18711715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 12091054 - 12090708
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  12091054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12090955  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  12090954 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 12090863  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||| ||||||    
T  12090862 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaaatc 12090765  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  12090764 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 12090708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 21374575 - 21374209
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||    
T  21374575 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttctttttcaaaataaccatcctctcgctctgcccgaagcg 21374476  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaa---agttta 205  Q
    ||||||||||||||  || ||   |||||||||||| ||  || |||| |||||||  ||||||||||||| |||| |||| | ||||| |   | |||     
T  21374475 aaagtgatatttctggaaagg-cgtgtttgtttcggcatcgccgttatcaataaaa--atcgtcgtttctttcacgacttttatttttttagtgattttt 21374379  T
Q  206 tgt----tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnn 297  Q
    | |    ||||| |||||||||||||||||| ||||||||||||||||| ||| || |||| ||||| ||||||||| ||||||||    |             
T  21374378 ttttttcttttttcttggaaataatggtaatgccagaaaaaaccaaaacatcttta-ttttccttatcaatttcaaagatctgcataaaagaaaaaaacc 21374280  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| |||||||||| || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  21374279 ctctttttaaaatcatccaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 21374209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 29831207 - 29831557
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  29831207 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 29831305  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggct-ttcactttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||  |   ||||||||||     ||||    
T  29831306 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttttttaaagt---gctttt 29831400  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaa 309  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           ||||||||||||    
T  29831401 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaa 29831498  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29831499 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29831557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 44563863 - 44564231
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44563863 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 44563962  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggc-----tttcactttttaaagtt 203  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |     ||| | |||||    ||    
T  44563963 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttattttatttttttttttt 44564059  T
Q  204 ta--tgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnn 295  Q
    ||  || |||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                  
T  44564060 tagttgctttttccttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaagaaaaaaaa 44564158  T
Q  296 nnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
      |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  44564159 aacattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 44564231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 33245386 - 33245740
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataac-aatcctctcgctctgcccgaag 107  Q
    ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||    
T  33245386 catcatcattccttcaatcatgcatgtttccgaataatgtgttttgttgcttaagtgttttgtttttcaaaaataacaaatcctctcgctctgcccgaag 33245485  T
Q  108 cgaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta 205  Q
    ||| ||||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| ||||   | ||||   ||||    
T  33245486 cgacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttt---tatttatttttta 33245579  T
Q  206 -tg--ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc-aaaaatctgcatgnnnnnnnnnctct 301  Q
     ||  ||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| ||||||||||||          ||||    
T  33245580 gtgctttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaatctgcat----aaaaacctct 33245673  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||  || | || || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  33245674 ttctaaaatcattcaaccgttttacgcagattgagccataataaacccgttgaacacagtaacccta 33245740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 366
Target Start/End: Original strand, 19676326 - 19676676
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  19676326 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 19676424  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta---tgtt 209  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||    ||||    
T  19676425 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttttttttttaagtgtt 19676519  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaa 308  Q
    ||| ||||||||| ||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||          || ||||||||    
T  19676520 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcatgaaaaaagaaactatttctaaa 19676618  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcc 366  Q
    |||||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||    
T  19676619 atcatccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatcc 19676676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 28360285 - 28359937
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28360285 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28360187  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  28360186 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 28360095  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||           |||||||||||    
T  28360094 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 28359997  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28359996 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28359937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 31356410 - 31356759
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31356410 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31356509  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || || ||| ||||  | ||||||||||||||| | | |  ||||| ||||     |||||    
T  31356510 atattttctgtaaggg-catgtttgtttcggcattgccgttgatcaat-aaaattttgtcgtttcttccacgac-tacttttttttaagt---gcttttt 31356603  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||||    
T  31356604 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaat 31356701  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31356702 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31356759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 9356515 - 9356856
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| ||||||  |||||| |||    
T  9356515 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtgatatttt 9356613  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttttcctt 217  Q
    || ||||||   ||||||||||||  || || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || ||||| ||||    
T  9356614 ctgtaaggg-catgtttgtttcggcgttgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttagtgctttttccctt 9356706  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||||| |    
T  9356707 ggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcatcca 9356804  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9356805 atcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9356856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 31488203 - 31487857
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||| ||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31488203 cattccttcaatcatgcatgtttctgagtaatgtgtctcgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31488104  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   ||||||| | ||     |||||    
T  31488103 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttta-gtgc---ttttt 31488013  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           ||||||||||||     
T  31488012 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaac 31487915  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31487914 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31487857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 3327837 - 3327489
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| |||| |||||||| |||| ||||||||  |||||||||||||||||||||||||| ||||||  |||    
T  3327837 cattccttcaatcatgcatgtttctgagtaatgtgtcctgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagggtg 3327738  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    || ||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  3327737 attttttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 3327647  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttct-aaa 308  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||    
T  3327646 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 3327549  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3327548 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3327489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 280
Target Start/End: Complemental strand, 22079238 - 22078976
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||| |||||||||||||  ||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  22079238 catcaacattccttcaatcatgcataattctgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctcttcccgaagcg 22079139  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggc-tttcactttttaaagtttatg 207  Q
    | ||||||||||||  |||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| |||||| ||| ||||||   |||         
T  22079138 agagtgatatttctgaaaggg-cgtgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacggctttttactttt---agt---gc 22079048  T
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 280  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||| || ||||||||||||||| ||||||    
T  22079047 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaattacaaaaa 22078976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 371
Target Start/End: Complemental strand, 19206690 - 19206344
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  19206690 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 19206591  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    |||| ||  |    
T  19206590 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gcttttt----tttagtgcct 19206501  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    ||| |||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  19206500 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaat 19206405  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  19206404 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 19206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 33260608 - 33260965
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| ||| || ||||    
T  33260608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagtgagagtg 33260706  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  33260707 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttttagtgcttt 33260801  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn--------ctctt 302  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||                 |||||    
T  33260802 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctt 33260899  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  33260900 tctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 33260965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 18792599 - 18792935
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  18792599 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 18792698  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  18792699 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 18792790  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| ||||||||||||| |||    
T  18792791 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctccttctaaaatcatccaat 18792886  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  18792887 cattttacgcagattgaactataataaacccgttgggcacagtaatcct 18792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 19689990 - 19690324
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  19689990 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 19690089  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttttcct 216  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | |||||||||| |||| |||   ||||||    |||| || |||||||||    
T  19690090 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgactt---cttttt----tttagtgcttttttcct 19690181  T
Q  217 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    |||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| ||||||||||||| |    
T  19690182 tggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctccttctaaaatcatcca 19690277  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  19690278 accattttacgcagattgaactataataaacccgttgggcacagtaa 19690324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 14559516 - 14559850
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttg-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||| |||||||||||||||||| ||||||||||||| |||||| ||||||||||    
T  14559516 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgctttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 14559615  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttttttcc 215  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||    |||| ||  ||||||||    
T  14559616 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---cttttt----tttagtgccttttttcc 14559706  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          |||||||||||||||||     
T  14559707 ttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatcc 14559802  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  14559803 aaccattttacgcagattgaactataataaacccgttgggcacagtaa 14559850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 16285341 - 16285669
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| || |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  16285341 tcaatcatgcatgtttctgagtaatatgccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 16285440  T
Q  122 ctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgga 220  Q
    || ||||||   ||||||||| || ||  |  || |||||||||  || |||||||||| |||| ||    || |||    ||  || ||||||||||||    
T  16285441 ctgtaaggg-catgtttgttttggcatcgctgttgttaataaaa--attgtcgtttctttcacgact---gctattt----ttagtgctttttccttgga 16285530  T
Q  221 aataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatca 320  Q
    |||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||| ||||||          ||||||||||||||||| || ||    
T  16285531 aataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaagctgcat--aaaaaaacctctttctaaaatcatccaacca 16285626  T
Q  321 ttatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    || || ||||||||||  ||||||||||| |||  ||||||||    
T  16285627 ttttacgcagattgaattataataaacccgttgggcacagtaa 16285669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 16279445 - 16279776
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  16279445 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16279544  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||  |||   |  ||||||||||    
T  16279545 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---ctttttttagtgcct--tttttccttg 16279637  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||          ||||||||||||||||| ||     
T  16279638 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat---aaaaaacctctttctaaaatcatccaac 16279731  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  16279732 cattttacgcagattgaactataataaacccgttgggcacagtaa 16279776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 27607228 - 27606891
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  27607228 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 27607129  T
Q  122 -ctataagggttttgtttgtttcggtattcc-----attattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcc 215  Q
     || ||||||  | ||||||||||| ||| |     |||| ||| ||||| ||  |||||||||||||| ||    |||||| | ||     ||||| ||    
T  27607128 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaaaaaatt-tcgtttcttccacgactg---ctttttta-gtgc---tttttccc 27607038  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| |||||||||||||     
T  27607037 ttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctccttctaaaatcatcc 27606943  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  27606942 aatcattttacgcagattgaactataataaacccgttgggcacagtaatcct 27606891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 2135582 - 2135250
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  || ||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||| |||||    
T  2135582 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtggtattt 2135483  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||  || || ||||||||||| || |||||||||| |||| ||    ||||||  |||   | ||||   ||||    
T  2135482 tctgtaagggcat-gtttgtttcggcatggccgttgattaataaaaa-attgtcgtttctttcacgactg---ctttttttagtgcctttttt---cttg 2135391  T
Q  219 gaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||||||||||||| |||||||||| ||||||| ||||||||||  ||||||||||||||||||||||||          ||||||||||||||||| ||    
T  2135390 gaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaa 2135296  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  2135295 ccattttacgcagattgaactataataaacccgttgggcacagtaa 2135250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 209 - 287
Target Start/End: Original strand, 15770666 - 15770742
Alignment:
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  15770666 ttttcccttggaaataatggtaatgccagaaaaaaccaaaacgtc--tattttttcttattaatttcaaaaatctgcat 15770742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 22078962 - 22078895
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||  ||||||| ||||| ||||    
T  22078962 tttctaaaatcattcaaccattttatgcagtttgaaccataataaacctgttgaacatagtaacccta 22078895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 61)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 3791435 - 3791780
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  3791435 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 3791533  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  ||| |   |||||    
T  3791534 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagtgt---ttttt 3791625  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  3791626 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 3791723  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3791724 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3791780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 34618412 - 34618757
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  34618412 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgatttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 34618510  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta--tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    ||||  |||||    
T  34618511 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttaagtgttt 34618601  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  34618602 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 34618699  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34618700 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34618757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 40471817 - 40471471
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  40471817 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 40471719  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  40471718 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 40471627  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  40471626 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 40471529  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40471528 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 40471471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 9547975 - 9547614
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  9547975 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 9547876  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttat 206  Q
    || ||||||| ||||| ||||||   |||||||||||| ||  || |||| |||||||  ||||||||||||| |||| |||| | ||||||    | ||    
T  9547875 gacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttatcaataaaa--atcgtcgtttctttcacgacttttatttttta---gtgat 9547782  T
Q  207 gttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgta---ttttttcttattaatttcaaaaatctgcatgnnnnnnnnnctc--- 300  Q
     |||||| |||||||||||||||||| | ||||||||||||||| ||| ||   |||||| |||||||||||||| ||||||||           ||       
T  9547781 ttttttttcttggaaataatggtaatgctagaaaaaaccaaaacatctttatttttttttattattaatttcaaagatctgcataaaagaaaaaatccct 9547682  T
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||| || |||| ||||||| |||||||||||||||||| || |||||||||||||||    
T  9547681 tttctaaaatcatccaaccattctatgcagtttgaaccataataaacccgttaaacacagtaatccta 9547614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 33878019 - 33878386
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33878019 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 33878118  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaa------agt 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||| |        |    
T  33878119 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttttagtgtttttt 33878215  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnn 296  Q
    || | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                   
T  33878216 ttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaa 33878314  T
Q  297 nctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  33878315 cccttttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 33878386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 365
Target Start/End: Complemental strand, 29888472 - 29888105
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  29888472 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgtccgaagcg 29888373  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || |||| |||||||  ||||||||||||| |||| |||| | ||||||  |           
T  29888372 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttatcaataaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 29888276  T
Q  202 --tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg------nnnnn 293  Q
      ||  | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||               
T  29888275 ttttcttttttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcatgaaagaaaaaaa 29888177  T
Q  294 nnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
        |  |||||||||||||  || |||| ||||||| |||||||||||||||||| |||||||||||||||    
T  29888176 aaacccttttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatc 29888105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 37769255 - 37768912
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37769255 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37769157  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcac-tttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||| ||||     ||||    
T  37769156 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttaagt---gctttt 37769065  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||||    
T  37769064 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg--aaaaaaactctttctaaaatc 37768969  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37768968 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37768912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 37756874 - 37757222
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37756874 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37756972  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || | |||| ||||  | ||||||||||||||| ||     ||||| ||||     |||||    
T  37756973 atattttctgtaaggg-catgtttgtttcggcattgccgttgactaat-aaaattttgtcgtttcttccacgactactttttttttaagt---gcttttt 37757067  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  37757068 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 37757165  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37757166 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 8663743 - 8663396
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  8663743 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 8663645  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  8663644 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 8663554  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  8663553 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 8663456  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8663455 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8663396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 18373803 - 18373456
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  18373803 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 18373705  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  18373704 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttagtgcttt 18373612  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||| ||||    
T  18373611 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaaa 18373514  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  18373513 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 18373456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 24725861 - 24726208
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24725861 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24725959  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |   |||||||    
T  24725960 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttttttttaagtgttttt 24726054  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||          || ||||||||||||    
T  24726055 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta-tttttcttattaatttcaaaaatctgcat-aaaaagaaactatttctaaaatca 24726152  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  24726153 tccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24726208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 32594542 - 32594195
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  32594542 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 32594444  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||  |||     |||||    
T  32594443 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgact---actttttttagtgc---ttttt 32594352  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttctaaaa 309  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||            ||||||||||||    
T  32594351 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaa 32594254  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  32594253 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 32594195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 365
Target Start/End: Complemental strand, 13323097 - 13322754
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||||||  |||    
T  13323097 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 13322999  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | |||||||||||  || || || ||||||||||   | ||||||||||||||| ||  |  ||||| |||   |  |||||    
T  13322998 atattttctgtaagggcat-gtttgtttcggcgttgccgttgattaataaaatttt-gtcgtttcttccacgacta-cttttttttaag---agcttttt 13322905  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  13322904 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatca 13322807  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    || ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  13322806 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 13322754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 37669751 - 37669407
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37669751 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37669653  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  37669652 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 37669562  T
Q  211 tttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||    
T  37669561 ttcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg--aaaaaaactctttctaaaa 37669466  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||| ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37669465 tcatccaatcagtatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37669407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 43080146 - 43080494
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  43080146 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 43080244  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||  |||     |||||    
T  43080245 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---accttttttagt---gcttttt 43080336  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             |||||||||||    
T  43080337 tccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatggaaaaaaaacaaactctttctaaa 43080434  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  43080435 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 43080494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 22890363 - 22890627
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  22890363 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctaaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagcgaaagt 22890462  T
Q  115 gata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  ||||| ||||||| |||| |||| | ||||   |||     |||||    
T  22890463 gatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgttgtttctttcacgacttttattttt---agt---gcttttt 22890553  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||    
T  22890554 tccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaatctgcat 22890627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 6876206 - 6876544
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| ||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| ||||||  ||| |||||     
T  6876206 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagttctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtggtatttt 6876304  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttccttg 218  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||||||| |||||    
T  6876305 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgtttttcccttg 6876395  T
Q  219 gaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||| ||||||||| |||||||||| ||||||||||||||||||  |||||||||||||||||||||||||         ||||||||||||||||| ||    
T  6876396 gaaacaatggtaatgccagaaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatcatccaa 6876493  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  6876494 tcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 6876544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 25200923 - 25201271
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25200923 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25201022  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctt-tcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| ||| | | ||||| |    | | |||||    
T  25201023 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttattatttttttagtgcttttttttt 25201119  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt--caaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||   ||||||||||||          |||||||||||||    
T  25201120 tccttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttaaaaaaaatctgcat----aaaaacctctttctaaaat 25201213  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| || |||| |||||||||||| | ||||||||||| |||  |||||||| ||||    
T  25201214 catccaaccattttatgcagattgagctataataaacccgttgggcacagtaacccta 25201271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 25265078 - 25265426
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25265078 cattccttcaatcatgcatgtttcccagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgacagtg 25265177  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctt-tcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| ||| | | ||||| |    | | |||||    
T  25265178 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttattatttttttagtgcttttttttt 25265274  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt--caaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||| ||||||||||||||||  ||||||  |||||||||||||||   ||||||||||||          |||||||||||||    
T  25265275 tccttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttaaaaaaaatctgcat----aaaaacctctttctaaaat 25265368  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| || |||| |||||||||||| | ||||||||||| |||  |||||||| ||||    
T  25265369 catccaaccattttatgcagattgagctataataaacccgttgggcacagtaacccta 25265426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 28651129 - 28651481
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28651129 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28651227  T
Q  116 ata-tttctataagggttttgtttgtttcggtattcc--attattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| |   | |||||| ||||  | ||||||||||||||| ||  |  |||||  |||     |||||    
T  28651228 atattttctgtaaggg-catgtttgtttcggcattgctgttgattaat-aaaattttgtcgtttcttccacgactacctttttttttagt---gcttttt 28651322  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnctctttctaa 307  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              ||||||||||    
T  28651323 tccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactctttctaa 28651420  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28651421 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28651481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 24683334 - 24683681
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24683334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24683432  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||     ||||| |||    |||||||    
T  24683433 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactactttttttttaag----tgttttt 24683526  T
Q  213 tccttggaaataatggtaataccagaaaaaacc-aaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||||          || |||||||||||    
T  24683527 cccttggaaacaatggtaatgccagaaaaaaccaaaaacgtctgta-tttttcttattaatttcaaaaatctgcat-aaaaagaaactatttctaaaatc 24683624  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| |||||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  24683625 atccaatcattatatgcaggctgaaccataataaacccgttgaacacagtaatccta 24683681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 10 - 287
Target Start/End: Original strand, 11326524 - 11326801
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||    
T  11326524 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataataatcttctcgctctgcccgaagc 11326623  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag-ttta 205  Q
    || ||||||| ||||| ||||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  | |||     
T  11326624 gacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttt 11326720  T
Q  206 tgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    | |||| | |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  11326721 ttttttcttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 11326801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 37356911 - 37356564
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  37356911 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 37356813  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||  ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  37356812 atattttctgtaaggg-catgtttgtttcgacattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttagtgcttt 37356720  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| ||||||||         |||||||| ||||    
T  37356719 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaagtctgcatg-aaaaaaaactctttctaaaaa 37356623  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  37356622 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 37356564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 23 - 280
Target Start/End: Original strand, 23894107 - 23894355
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||    
T  23894107 tcaatcatgcatgtttctgagtaatatgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgagagtgatatttt 23894206  T
Q  122 ctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgga 220  Q
    || ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| ||||||||| | ||||   |||      ||||||||||||    
T  23894207 ctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacggcttttattttt---agt---gcctttttccttgga 23894297  T
Q  221 aataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 280  Q
    |||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||    
T  23894298 aataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaa 23894355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 30170363 - 30170708
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  30170363 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 30170462  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    |||| ||       
T  30170463 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gcttttt---ttttagtgccc 30170553  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  30170554 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 30170650  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30170651 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30170708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 28958054 - 28957706
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28958054 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28957956  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    |||||| || ||||||   |||||||||||| ||| || || |||||| ||||  | |||||||||| |||| ||   |||||||    |||| || |||    
T  28957955 atatttcctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttctttcacgact---acttttt----tttagtgcttt 28957865  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttct-aa 307  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||| ||    
T  28957864 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 28957767  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  28957766 aatcatccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 28957706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 31824675 - 31824328
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || || | ||||||||||||| | || || ||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  31824675 cattccttcaatcatgcatgtttctgagtagtgtgtcttgttgctttaatgcttcgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 31824577  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||||||    
T  31824576 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgtttt 31824486  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn---ctctttctaaa 308  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||             |||||||||||    
T  31824485 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaaaaactctttctaaa 31824388  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31824387 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31824328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 15757125 - 15756773
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||| ||||||||||| || |||| ||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  15757125 cattccttcaataatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 15757026  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| || |   |||||    |||| || |||    
T  15757025 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgactattttttttt----tttagtgcttt 15756932  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn---ctctttctaa 307  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||            ||||||||||    
T  15756931 ttcccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaa 15756834  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  15756833 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 15756773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 5639681 - 5640026
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||| || ||||    
T  5639681 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 5639779  T
Q  116 atattt-ctataagggttttgtttgtttcggtattcca--ttattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| |   | ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  5639780 atattttctgtaagggcat-gtttgtttcggcattgccgctgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 5639870  T
Q  212 tt--ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaa 309  Q
    ||  ||||||||| ||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||||||||         ||||||||||||    
T  5639871 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaa 5639968  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  5639969 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 5640026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 18498998 - 18498646
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||||||| |||||||| |||||| ||||    
T  18498998 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcactctgcccaaagcgagagtg 18498900  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
     ||||| || ||| ||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    ||  || ||||    
T  18498899 gtattttctgtaaaggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttttttttagtgctttt 18498805  T
Q  213 tcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaa 307  Q
    ||| ||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             | ||||||||    
T  18498804 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactccctttctaa 18498707  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  18498706 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 18498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 33294426 - 33294766
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| |||||||||||||||||||||||| || |||||| ||||||||||    
T  33294426 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgtccaaagcgagagtgatattt 33294525  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||   | |||||||||||    
T  33294526 gctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactg---ctttttttagtaccttttttttccttg 33294621  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| ||||||||||| |||||||||||||||||          ||||||||||||||||| |||    
T  33294622 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattgatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaat 33294717  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  33294718 cattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33294766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 22997375 - 22997043
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  22997375 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22997276  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    |||||| ||||     ||||| |||||    
T  22997275 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttttaagt---gctttttcccttg 22997183  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| |||||||||||||||||    
T  22997182 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctccttctaaaatcatctaat 22997088  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22997087 cattttacgcagattgaactataataaacccgttgggcacagtaa 22997043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 15657021 - 15656680
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||| |||   ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  15657021 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtaccttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 15656922  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||| | |||| || |  |||||| || |   | ||||| ||||||    
T  15656921 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttccttcacgactgtttcttttttaa-tgcctttttttcccttgg 15656825  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatc 319  Q
    ||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||          ||||||||||||||||| || |    
T  15656824 aaacaatggtaatgccagaaaaaaccaaaacatctgtattttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaacc 15656728  T
Q  320 attatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  15656727 attttacgcagattgaactataatgaacccgttgggcacagtaatcct 15656680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 41676603 - 41676944
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  41676603 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 41676701  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || || |||||||  || |||||||||| |||| ||    ||||||    ||  ||  |||    
T  41676702 atattttctgtaaggg-catgtttgtttcggcattgccgttgatgaataaaa--attgtcgtttctttcacgact---gcttttt----ttagtgccttt 41676791  T
Q  213 tccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | |||||||| ||||||||| |||| ||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||    
T  41676792 ttcttggaaaaaatggtaatgccagaaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatc 41676887  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| || |||| || ||||||||||| ||||| ||||| ||||||||||||||||||    
T  41676888 atccaaccattttacgcagattgaactataatgaacccgttgaacacagtaatccta 41676944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 13184081 - 13183795
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13184081 catcatcattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13183982  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactt-ttta------- 198  Q
    || ||||||| |||||  |||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | || ||||           
T  13183981 gacagtgatattttctgcaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttatttatttatttattt 13183885  T
Q  199 aagttta-tg-ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |  |||| || ||||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| ||||||||    
T  13183884 atttttagtgcttttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcat 13183795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 208 - 365
Target Start/End: Original strand, 31433545 - 31433700
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaa 307  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||    
T  31433545 tttttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaa 31433642  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatc 365  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||    
T  31433643 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatc 31433700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 33779388 - 33779727
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  33779388 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 33779487  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||     ||||||  |  |   |||||| ||||    
T  33779488 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactgcttttttttagtgcct---tttttttcttg 33779582  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  33779583 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 33779678  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  33779679 cattttacgcagattgaactataatgaacccgttgggcacagtaatcct 33779727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 30031309 - 30031667
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30031309 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30031407  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| || |   ||||||  |      |||||    
T  30031408 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactatttttttttagtg-----cttttt 30031500  T
Q  213 tccttggaaataatggtaataccag---aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----------nnnnnnnnnct 299  Q
     ||||||||| ||||||||| ||||   ||||||||||||||||||||  |||||||||||||||||||||||||||||                   ||    
T  30031501 cccttggaaacaatggtaatgccagaaaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaact 30031598  T
Q  300 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30031599 ctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30031667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 30153912 - 30154270
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30153912 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30154010  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  30154011 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 30154101  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-------------nnnnnnnnn 297  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                          
T  30154102 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaaaaa 30154199  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||| |||||||| || |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  30154200 ctctttcttaaatcatccaaccattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 30154270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 10 - 121
Target Start/End: Complemental strand, 13439926 - 13439814
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  13439926 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 13439827  T
Q  109 gaaagtgatattt 121  Q
    || ||||||||||    
T  13439826 gacagtgatattt 13439814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 30936534 - 30936870
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||  ||||||||||| |||| |||||||||| |||||| |||||||||    
T  30936534 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaaacctcccgctctgcccaaagcgagagtgatatt 30936633  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcctt 217  Q
    | || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||   | ||||||  | ||   ||||||||||    
T  30936634 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactgcta-tttttagtgctt---ttttttcctt 30936728  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    ||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||    
T  30936729 ggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctctttctaaaatcatccaa 30936824  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  30936825 ccattttacgcagattgaactataatgaacccgttgggcacagtaa 30936870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 370
Target Start/End: Complemental strand, 18125656 - 18125319
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||  ||||||||||||||||| ||||||||| |||||| |||||||||    
T  18125656 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttcaaaataacaatcctcttgctctgcccaaagcgagagtgatatt 18125557  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcctt 217  Q
    | || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    |||||   |||     ||||| ||||    
T  18125556 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactg---ctttt---agtgc---tttttccctt 18125467  T
Q  218 ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaa 317  Q
    |||||| |||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |  |||||||||||||  ||    
T  18125466 ggaaatgatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaacccattttctaaaatcattcaa 18125372  T
Q  318 tcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    ||||| ||||||  |||||||||||||||||| ||||||||||||||||||||    
T  18125371 tcattctatgcaatttgaaccataataaacccgttgaacacagtaatcctatg 18125319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 16 - 371
Target Start/End: Original strand, 26482285 - 26482636
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||| ||||||| |||||| ||||    
T  26482285 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgttctgcccaaagcgagagtg 26482384  T
Q  116 ata--tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttt 210  Q
    |||  ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| | | |  |||||||      ||  |    
T  26482385 atatttttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgac-tgctttttttaa-----gtgcct 26482475  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttct-aa 307  Q
    ||| |||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||           |||||||| ||    
T  26482476 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 26482572  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26482573 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26482636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 208 - 368
Target Start/End: Complemental strand, 13439744 - 13439588
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaa 307  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||          || |||||||    
T  13439744 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgtat-ttttcttattaatttcaaaaatctgcat---aaaaaccctttttctaa 13439649  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13439648 aatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13439588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 2512945 - 2513206
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  ||||||||||||||||||||||||||||||||| | ||    
T  2512945 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccgaagcgacaatg 2513044  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||  || |||||||||| |||| || |   ||||     ||  ||  |||    
T  2513045 atattttctgtaaggg-cgtgtttgtttcggcattgccgttgattaataaaa--attgtcgtttctttcacgactgt---tttt-----ttagtgccttt 2513133  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    | |||||||| ||||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||||||||    
T  2513134 ttcttggaaaaaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcat 2513206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 33518250 - 33518619
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||  | |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  33518250 cattccttcaatcatgcatgtttctaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 33518348  T
Q  116 atat-ttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggct------------ttcactttttaaa 200  Q
    |||| |||| ||||||  | ||||||||||  ||| || || ||||||||||   | ||||||||||||||| ||            ||   ||||||      
T  33518349 atattttctgtaagggcat-gtttgtttcgacattgccgttgattaataaaatttt-gtcgtttcttccacgactacttttttttttttttttttttagt 33518446  T
Q  201 gtttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-------nnnnn 293  Q
    | || | ||||| ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                
T  33518447 gcttttttttttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaa 33518544  T
Q  294 nnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
        |  |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  33518545 aaaccattttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtagtccta 33518619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 24686418 - 24686071
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt- 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||||||||     
T  24686418 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24686319  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatc-gtcgtttcttccacggct--------ttcactttttaaagtttatgtt 209  Q
    ||| ||||||    ||||||||||| ||| || || |||||||||||  |  |||||||||| |||| ||        ||   |||||  ||| | | ||    
T  24686318 tctgtaagggcac-gtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacgactgcttatttttttttttttttagtgtctttt 24686220  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaa 309  Q
    ||||| ||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||    
T  24686219 ttttc-ttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaccctctttctaaaa 24686125  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||| || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24686124 tcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 24686071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 288
Target Start/End: Original strand, 9319345 - 9319612
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  9319345 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9319444  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    ||  ||  ||    
T  9319445 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gctttttttttttagtgcctt 9319538  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
    || |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  9319539 tttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 9319612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 208 - 367
Target Start/End: Original strand, 23628053 - 23628207
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaa 307  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||| |||||          ||||||||||    
T  23628053 ttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatatgcat---aaaaaccctctttctaa 23628147  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||||| || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  23628148 aatcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 23628207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 16 - 288
Target Start/End: Original strand, 12134049 - 12134314
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  12134049 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 12134148  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    |||| ||  |    
T  12134149 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gcttttt---ttttagtgcct 12134239  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  12134240 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 12134314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 11551255 - 11551589
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-----aaaataacaatcctctcgctctgcccgaagcgaaagtgat 117  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||      |||||||||||||||||||||||||| |||||| ||||||    
T  11551255 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaaataacaatcctctcgctctgcccaaagcgagagtgat 11551354  T
Q  118 a-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttc 214  Q
    | ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||    |||||| ||||     ||||| |    
T  11551355 attttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---gcttttttaagt---gctttttcc 11551446  T
Q  215 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatc 314  Q
    |||||||||||||||||| |||||||||||||||||  | |||  |||||||||||||||| |||||||||||          |||||||||||||||||    
T  11551447 cttggaaataatggtaatgccagaaaaaaccaaaacacccgta--ttttcttattaatttc-aaaatctgcat---aaaaaacctctttctaaaatcatc 11551540  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  11551541 caaccattttacgcagattgaactataataaacccgttgggcacagtaa 11551589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 121
Target Start/End: Complemental strand, 23716249 - 23716151
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  23716249 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 23716151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 2513231 - 2513300
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  2513231 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 2513300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 9319645 - 9319718
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  9319645 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 9319718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 371
Target Start/End: Original strand, 12134344 - 12134417
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  12134344 ctctttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 12134417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 121
Target Start/End: Original strand, 31433334 - 31433438
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||||||  |||    
T  31433334 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagggtg 31433432  T
Q  116 atattt 121  Q
    ||||||    
T  31433433 atattt 31433438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 24971919 - 24972018
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||||||    
T  24971919 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 24972018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 11326825 - 11326892
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  11326825 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 11326892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 13183764 - 13183697
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13183764 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13183697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 298 - 363
Target Start/End: Original strand, 24972075 - 24972140
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||||||||||||||| || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24972075 ctctttctaaaatcatccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 24972140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 298 - 368
Target Start/End: Original strand, 23894375 - 23894445
Alignment:
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||||| || |||| || ||||||||| |||||||||| || |||  |||||||| ||||    
T  23894375 ctctttctaaaatcatccaaccattttacgcagattgagccataataaatccgttgggcacagtaacccta 23894445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 16043209 - 16043548
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16043209 cattccttcaatcatgcatgtttccgagtaatgtgttttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16043308  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| |||| |||| | ||||||       || |||||    
T  16043309 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacgactttta-ttttta------gtgcttttt 16043398  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcat 313  Q
    ||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||||||||||||          || |||||||||||||    
T  16043399 ccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaaaatctgcat----aaaaacctttttctaaaatcat 16043493  T
Q  314 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    | || |||| || ||||||| ||||||||||||||| |||  |||||||| ||||    
T  16043494 ccaaccattttacgcagattaaaccataataaacccgttgggcacagtaacccta 16043548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 16749771 - 16749426
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16749771 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16749673  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||| |||||||||| ||   |||||||    |||| ||||||    
T  16749672 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgcttcttccacgact---acttttt---ttttagtgtttt 16749581  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||||    
T  16749580 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatc 16749483  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  16749482 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16749426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 17525418 - 17525763
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  17525418 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17525516  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||| |||||||||| ||   |||||||    |||| ||||||    
T  17525517 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgcttcttccacgact---acttttt---ttttagtgtttt 17525608  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||||    
T  17525609 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatc 17525706  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  17525707 atccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17525763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 31087885 - 31087607
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  31087885 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctacccgaagcg 31087786  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag----ttt 204  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |    |||    
T  31087785 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 31087689  T
Q  205 atgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
     | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  31087688 ttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 31087607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 45389106 - 45389449
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||| || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  45389106 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 45389204  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  45389205 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt-tagt---gcttttt 45389295  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||| ||    
T  45389296 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaacca 45389393  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  45389394 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 45389449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 5145597 - 5145249
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5145597 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5145499  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| |||||| | |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  5145498 atattttctgtaaggg-tatgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 5145407  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||              ||||||||||    
T  5145406 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaattctttctaaa 5145309  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  5145308 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 5145249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 17527797 - 17527451
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  17527797 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 17527699  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||| |||||||||| ||   |||||||    |||| ||||||    
T  17527698 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgcttcttccacgact---acttttt---ttttagtgtttt 17527607  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaat 310  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||||    
T  17527606 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaat 17527509  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  17527508 catccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 17527451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 16734717 - 16734370
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaa-taatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| |||    
T  16734717 cattccttcaatcatgcatgtttccgaagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagt 16734619  T
Q  115 gata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    |||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | |||| |||||||||| ||   |||||||    |||| |||||    
T  16734618 gatattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgcttcttccacgact---acttttt---ttttagtgttt 16734527  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  16734526 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 16734429  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| ||||||||||| |||||| ||||||||||||||||||    
T  16734428 tcatccaatcattatatgcaggttgaaccataacaaacccgttgaacacagtaatccta 16734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 367
Target Start/End: Original strand, 26437143 - 26437485
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26437143 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26437241  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  26437242 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 26437333  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  26437334 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatca 26437430  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    || ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26437431 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26437485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 39210402 - 39210122
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39210402 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 39210303  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------t 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  || |||||||||| |||| |||| | ||||||  |      |    
T  39210302 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--attgtcgtttctttcacgacttttattttttagtgatttttt 39210206  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||   |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  39210205 tttcttttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 39210122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 3447192 - 3447535
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  3447192 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3447290  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||| ||||| ||   ||| |||  |||     |||||    
T  3447291 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttctcccacgact---actcttt-tagt---gcttttt 3447381  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  3447382 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaatca 3447479  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  3447480 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 3447535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 370
Target Start/End: Original strand, 4201275 - 4201620
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  4201275 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 4201374  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||  || |||||||||| |||| ||    |||||     ||  ||  |||    
T  4201375 atattttctgtaaggg-cgtgtttgtttcggcattgccgttgattaataaaa--attgtcgtttctttcacgact---gctttt-----ttagtgccttt 4201463  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
    | |||||||| ||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  4201464 ttcttggaaaaaatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaacaactctttctaaaatc 4201561  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  4201562 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 4201620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 31126806 - 31127152
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  31126806 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 31126904  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  31126905 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 31126996  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  31126997 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaagactctttctaaaat 31127094  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31127095 cattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31127152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 4143503 - 4143155
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4143503 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4143405  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  4143404 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 4143314  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat---gnnnnnnnnnctctttctaa 307  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||             ||||||||||    
T  4143313 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcataaaaaaaaaaaaactctttctaa 4143216  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4143215 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4143155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 11442765 - 11443116
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  11442765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 11442863  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    ||  || ||||    
T  11442864 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---actttttttttttagtgctttt 11442958  T
Q  213 tcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn---ctctttctaaa 308  Q
    ||| ||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||            |||||||||||    
T  11442959 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaa 11443056  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  11443057 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 11443116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 9620537 - 9620879
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  9620537 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 9620635  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||| ||||| ||   ||| |||  |||     |||||    
T  9620636 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttctcccacgact---actcttt-tagt---gcttttt 9620726  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  9620727 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatca 9620823  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  9620824 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 9620879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 26536127 - 26535783
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26536127 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26536029  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  26536028 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt-tagt---gcttttt 26535938  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||           |||||||||||||    
T  26535937 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaaat 26535840  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  26535839 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 26535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 367
Target Start/End: Original strand, 2776124 - 2776498
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2776124 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 2776223  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta---aagttta 205  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||   |  |||     
T  2776224 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 2776320  T
Q  206 tgttttttc------------cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----g 288  Q
    | |||||||            |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||          
T  2776321 ttttttttctttctcttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaga 2776419  T
Q  289 nnnnnnnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
             |  |||||||||||||  || |||| ||||||| |||||||||||||||||| |||||||||||||||||    
T  2776420 aaaaaaaaccattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatcct 2776498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 280
Target Start/End: Complemental strand, 16448255 - 16448002
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  16448255 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataaaaatcctctcgctctgcccgaagcgaaagtg 16448156  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| |||| |||| | ||||||       || |||||    
T  16448155 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacgactttta-ttttta------gtgcttttt 16448066  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaa 280  Q
    ||||||||||||||||||| |||||||||||||||||  | |||  |||||||||||||||||||||    
T  16448065 ccttggaaataatggtaatgccagaaaaaaccaaaac-accgta--ttttcttattaatttcaaaaa 16448002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 26668171 - 26667823
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26668171 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26668073  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--tt 209  Q
    ||| ||||| ||||||   |||||||||||| ||  || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  26668072 atattttctgtaaggg-catgtttgtttcggcatcgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 26667982  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaa 307  Q
    ||| ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||           ||||||||||    
T  26667981 tttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaa 26667884  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26667883 aatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26667823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 31562647 - 31562299
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  31562647 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 31562548  T
Q  116 a-tatttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    | | ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||     |||||  |||     |||||    
T  31562547 attttttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact----atttttttagt---gcttttt 31562457  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||             |||||||||||    
T  31562456 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaa 31562359  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  31562358 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 31562299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 10 - 363
Target Start/End: Complemental strand, 2108426 - 2108077
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtg-ttttgtttttcaaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||    
T  2108426 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgctttagtgcttttgtttttcaaaataacaatcctctcgctctgcccaaagc 2108327  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtatt-ccattatt--aataaaaagatcgtcgtttcttccacggctttcactttttaaagttt 204  Q
    || ||||||| ||||| ||||||   |||||||||||| ||| || ||  |  || ||||| || |||||||||| |||||||    ||||||    |||    
T  2108326 gagagtgatattttctgtaaggg-catgtttgtttcggcattgccgttgataaaaaaaaaaaattgtcgtttctttcacggct---gcttttt----ttt 2108235  T
Q  205 a-tg--ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctct 301  Q
    | ||  ||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          | ||    
T  2108234 agtgccttttttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaacccct 2108139  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    ||||||||||||| || |||| || ||||||| ||| ||||||||||| |||  ||||||||    
T  2108138 ttctaaaatcatccaaccattttacgcagattaaactataataaacccgttgggcacagtaa 2108077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 10 - 198
Target Start/End: Original strand, 26485458 - 26485644
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26485458 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26485557  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta 198  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||    
T  26485558 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttta 26485644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 10 - 198
Target Start/End: Complemental strand, 26682379 - 26682193
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26682379 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26682280  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcacttttta 198  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||    
T  26682279 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttta 26682193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 26514667 - 26515021
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  26514667 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 26514765  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | |||| |||||||||| ||   |||||||  |||     |||||    
T  26514766 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcggttcttccacgact---actttttttagtgc---ttttt 26514857  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----------nnnnnnnnnctctt 302  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||                   |||||    
T  26514858 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaaaactctt 26514955  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26514956 tctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26515021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 24590798 - 24590444
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| ||| || ||||    
T  24590798 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttattgctttgtttt-caaaataacaatcctctcgctctgcccaaagtgagagtg 24590700  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  24590699 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttt--tttagtgcttt 24590607  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn--------ctctt 302  Q
    |||| ||||||| ||||||||||||||||||||||||||| | ||||||||  |||||||||||||||||||||||||                 |||||    
T  24590606 ttcccttggaaacaatggtaataccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactctt 24590509  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  24590508 tctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 24590444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 16 - 371
Target Start/End: Complemental strand, 26273351 - 26272992
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26273351 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26273253  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  26273252 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 26273161  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----------gnnnnnnnnnctc 300  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||                    |||    
T  26273160 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcataaaaaaaaaaaaaaaaaaaactc 26273063  T
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
     ||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26273062 cttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26272992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 5129885 - 5130220
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  5129885 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5129984  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||     ||||||  |  |   |||||| ||||    
T  5129985 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactgcttttttttagtgcct---tttttttcttg 5130079  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  5130080 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 5130175  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  5130176 cattttacgcagattgaactataataaacccgttgggcacagtaa 5130220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 45734182 - 45734558
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  45734182 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 45734281  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttca----------ctttt 196  Q
    || ||| ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| |           ||||    
T  45734282 gacagtaatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttattttttttttttttt 45734378  T
Q  197 taaag---tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------ 287  Q
    |  ||   ||| | ||||||  ||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||          
T  45734379 tttagttcttttttttttttttttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaaag 45734477  T
Q  288 gnnnnnnnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
              |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  45734478 aaaaaaaaaccattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 45734558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 5161412 - 5161747
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||| |||||||||||||||||||||||||||| |||||| ||||||| ||    
T  5161412 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 5161511  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||| ||||||   |||||||||||| ||| || || ||||||||||| || |||||||||| |||| |  |   |||||  |||   | |||||| ||||    
T  5161512 tctgtaaggg-catgtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgac--tgcttttttttagtacct-tttttttcttg 5161606  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  5161607 gaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaccctctttctaaaatcatccaac 5161702  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  5161703 cattttacgcagattgaactataatgaacccgttgggcacagtaa 5161747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 10915118 - 10914784
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt--caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | || |||||  ||||||||||||||||||||||||||| |||||| |||||||||    
T  10915118 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttatttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatt 10915019  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttttttc 214  Q
    | || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||    |||| ||  |||||||    
T  10915018 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---cttttt----tttagtgccttttttc 10914928  T
Q  215 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatc 314  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||||||    
T  10914927 cttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatc 10914833  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     || |||| || ||||||| ||| ||||| ||||| |||  ||||||||    
T  10914832 caaccattttacgcagattaaactataatgaacccgttgggcacagtaa 10914784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 16501651 - 16501308
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt- 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||||||||     
T  16501651 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16501552  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-------tcgtcgtttcttccacggctttcactttttaaagtttatg-ttt 210  Q
    ||| ||||||    ||||||||||| ||| || || ||||||||||| |       | |||||||||| |||| ||    ||||||    ||  || |||    
T  16501551 tctgtaagggcac-gtttgtttcggcattgccgttgattaataaaaaaaattgaaattgtcgtttctttcacgactg---ctttttttttttagtgcttt 16501456  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||    
T  16501455 tttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaat 16501361  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  16501360 catccaaccattttacgcagattgaactataataaacccgttgggcacagtaa 16501308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 2156466 - 2156798
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||| | | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  2156466 tcaatcatgcatgtttctgagtaatataccttgttgcttaaatatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 2156565  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||| | |||||||||| |||| ||    ||||||  |||   |  ||||||||||    
T  2156566 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaagtt-gtcgtttctttcacgactg---ctttttttagtgcct--tttttccttg 2156658  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||           |||||||||||||||| ||     
T  2156659 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat--aaaaaaccttctttctaaaatcatccaac 2156753  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  2156754 cattttacgcagattgaactataataaacccgttgggcacagtaa 2156798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 23 - 349
Target Start/End: Complemental strand, 16516687 - 16516358
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt- 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| |||||||||     
T  16516687 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 16516588  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-------tcgtcgtttcttccacggctttcactttttaaagtttatg-ttt 210  Q
    ||| ||||||    ||||||||||| ||| || || ||||||||||| |       | |||||||||| |||| ||    ||||||    ||  || |||    
T  16516587 tctgtaagggcac-gtttgtttcggcattgccgttgattaataaaaaaaattgaaattgtcgtttctttcacgactg---ctttttttttttagtgcttt 16516492  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||    
T  16516491 tttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaat 16516397  T
Q  311 catctaatcattatatgcagattgaaccataataaaccc 349  Q
    |||| || |||| || ||||||||||| |||||||||||    
T  16516396 catccaaccattttacgcagattgaactataataaaccc 16516358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 288
Target Start/End: Complemental strand, 26318126 - 26317862
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||| ||| |||| ||||||||||||| || | ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  26318126 cattccttcaatcatgcatgttttcgagtaatgtgtcttgttgctttagcgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 26318027  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || |||||||||| |||| ||    ||||||    |||| ||  |    
T  26318026 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttctttcacgact---gcttttt----tttagtgcct 26317937  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
    ||| |||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||||||    
T  26317936 ttttcttggaaa-aatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaacctgcatg 26317862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 11423027 - 11422693
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt---caaaataacaatcctctcgctctgcccgaagcgaaagtgatat 119  Q
    ||||||||||||||||| || |||| |  || ||||||||||| ||| ||||||   |||||| |||||||||||||||||||| |||||| ||||||||    
T  11423027 tcaatcatgcatgtttctgagtaatatacctcgttgcttaagtatttcgttttttttcaaaatgacaatcctctcgctctgcccaaagcgagagtgatat 11422928  T
Q  120 tt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttcct 216  Q
    || || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||    
T  11422927 tttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttccct 11422836  T
Q  217 tggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    |||||||||||||||| | || ||||||||||||| ||  ||| ||||||||||||||||||||||||||||          |||||||||||||||||     
T  11422835 tggaaataatggtaatgctagaaaaaaaccaaaacatc--tatattttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatcc 11422741  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    || |||| || ||||||||||| ||||||||||| |||| ||||||||    
T  11422740 aaccattttacgcagattgaactataataaacccgttgagcacagtaa 11422693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 301 - 371
Target Start/End: Complemental strand, 26317824 - 26317754
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||| ||||||    
T  26317824 tttctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaattctatgc 26317754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 208 - 368
Target Start/End: Complemental strand, 26682164 - 26681999
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctct 301  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  |    
T  26682164 tttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccatt 26682066  T
Q  302 ttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26682065 ttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 26512656 - 26512589
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26512656 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26512589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 31087582 - 31087515
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  31087582 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 31087515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 39210099 - 39210032
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  39210099 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 39210032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 208 - 274
Target Start/End: Complemental strand, 26512756 - 26512691
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt 274  Q
    |||||| |||||||| ||||||||||||||||||||||||||  | | |||||||| ||||||||||    
T  26512756 tttttttcttggaaaaaatggtaataccagaaaaaaccaaaaaatttttatttttt-ttattaattt 26512691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 134; Significance: 1e-69; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 3697963 - 3698312
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  3697963 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 3698061  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| || |||    
T  3698062 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttttagtgcttt 3698156  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||         |||||||||||||    
T  3698157 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 3698254  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3698255 catccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatccta 3698312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 17090760 - 17090410
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||| ||||  ||||||||||||||| ||||| ||||||||||| |||||||||||    
T  17090760 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgtt--gtttttcaaaataacgatcctttcgctctgcccaaagcgaaagtg 17090663  T
Q  116 atatt-tctataagggttttgtttgtttcggtatt-ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg--tttt 211  Q
    | ||| ||| ||||||   |||||||||||| ||| ||||||| |||||||| ||||||||||||| ||||||||||| |||||||  ||||||  |||     
T  17090662 agattatctgtaaggg-catgtttgtttcggcattcccattatcaataaaaaaatcgtcgtttctttcacggctttca-tttttaatttttatgcctttc 17090565  T
Q  212 ttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    ||||||||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||||||||||||||           ||||||| ||||    
T  17090564 ttccttggaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat-aaaaaaaccatctttctcaaat 17090468  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||| || ||||||||||||||||||||||| |||| |||||| ||||||    
T  17090467 catccaatcattttacgcagattgaaccataataaacccgttgagcacagtgatccta 17090410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 33373734 - 33373381
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33373734 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 33373635  T
Q  109 gaaagtgata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta 205  Q
    || ||||||| ||||| ||||||   |||||||||||| ||| || ||  |||||||||| || |||||||||| |||| ||   |||||||    ||||    
T  33373634 gacagtgatattttctgtaaggg-catgtttgtttcggcattgccgttggttaataaaaa-attgtcgtttctttcacgact---acttttt--ttttta 33373542  T
Q  206 -tg-ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctcttt 303  Q
     ||  ||||| |||||||||||||||||| ||||||||||||||||  |||||| |||||||||||||||||||||||||||||          ||||||    
T  33373541 gtgccttttttcttggaaataatggtaatgccagaaaaaaccaaaaaatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaacctcttt 33373446  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  33373445 ctaaaatcatccaaccattttatgcagtttgaaccataataaacccgttgaacacagtaatccta 33373381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 26775924 - 26775578
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26775924 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26775826  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  26775825 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 26775734  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  26775733 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 26775636  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26775635 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26775578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 26788703 - 26789061
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  26788703 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 26788802  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || |||| || ||||  ||||||||||||| |||| |||| | |||||  |||   | |    
T  26788803 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttatcaacaaaa--atcgtcgtttctttcacgacttttatttttt--agtgatttt 26788897  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnnctcttt 303  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||               |  |||    
T  26788898 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaccatttt 26788996  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  26788997 ctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 26789061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 27252164 - 27251805
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27252164 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27252065  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || |||| || ||||  ||||||||||||| |||| |||| | |||||  |||   | |    
T  27252064 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttatcaacaaaa--atcgtcgtttctttcacgacttttatttttt--agtgatttt 27251970  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnnnctctt 302  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                |  ||    
T  27251969 ttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaaccattt 27251871  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27251870 tctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27251805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 27359427 - 27359061
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27359427 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27359328  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------t 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |      |    
T  27359327 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 27359231  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnn 297  Q
    || | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                   
T  27359230 ttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaa 27359132  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27359131 cattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27359061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 27449770 - 27449404
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27449770 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27449671  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------t 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |      |    
T  27449670 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgatttttt 27449574  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-----gnnnnnnnnn 297  Q
    || | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                   
T  27449573 ttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaa 27449475  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27449474 cattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27449404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 4759646 - 4759992
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4759646 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4759744  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| ||||| |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  4759745 atattttctgtaaggg-catgtttgtttcggcattgccattgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 4759836  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||| |||||||||||||         |||||||||||||    
T  4759837 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaattttaaaaatctgcatgaaaaaaaaactctttctaaaat 4759934  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4759935 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 27197076 - 27197430
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  27197076 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 27197175  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || |||| || ||||  ||||||||||||| |||| |||| | ||||||  | |    |    
T  27197176 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttatcaacaaaa--atcgtcgtttctttcacgacttttattttttagtgat----t 27197268  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnctctttc 304  Q
    ||||| ||||||||||||||||||||||| |||||||||||| ||| || |||||||||| ||||||||| | ||||||    |         |  ||||    
T  27197269 ttttttcttggaaataatggtaataccag-aaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaccattttc 27197366  T
Q  305 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  27197367 taaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 27197430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 26114724 - 26114379
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  26114724 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 26114626  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcac-tttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||| ||||     ||||    
T  26114625 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttaagt---gctttt 26114534  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         || |||||||||||    
T  26114533 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactatttctaaaatc 26114436  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  26114435 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 26114379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 27046270 - 27046616
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27046270 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27046368  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  27046369 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 27046459  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  27046460 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 27046557  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27046558 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27046616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 4722448 - 4722102
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||| |||||||||||| |||||| ||||    
T  4722448 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcccctcgctctgcccaaagcgagagtg 4722350  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   ||||||     |||| || |||    
T  4722349 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttt---cttttagtgcttt 4722258  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||    
T  4722257 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaactctttctaaaat 4722160  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4722159 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4722102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 13521509 - 13521142
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13521509 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 13521410  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaa------agt 202  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||| |        |    
T  13521409 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttatttttttagtgtttttt 13521313  T
Q  203 ttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat------gnnnnnnnn 296  Q
    || | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||                   
T  13521312 ttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaaaa 13521214  T
Q  297 nctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  13521213 cccttttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 13521142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 16942341 - 16941994
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||||| || ||| |||| ||||||||||||||||||||||||||| |||||| ||||    
T  16942341 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgcttaaatgctttatttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16942243  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--tt 209  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  16942242 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttt----tttagtgcttt 16942152  T
Q  210 ttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-gnnnnnnnnnctctttctaaa 308  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||| |         |||||||||||    
T  16942151 ttttccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatggaaaaaaaaactctttctaaa 16942054  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16942053 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16941994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 16 - 375
Target Start/End: Complemental strand, 27288684 - 27288321
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||| ||||    
T  27288684 cattccttcaatcatgcatgtttccgagtaatatgtcttgttgctttagtgctttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtg 27288585  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || || |||||||| || |||||||||| |||| ||    ||||||    |||| ||  ||    
T  27288584 atattttctgtaaggg-catgtttgtttcggcattgccgttgatgaataaaaaaattgtcgtttctttcacgact---gcttttt--tttttagtgcctt 27288491  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--------nnnnnnnnnctcttt 303  Q
    || |||||||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||                 ||||||    
T  27288490 tttcttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaaactcttt 27288393  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 375  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||||||    
T  27288392 ctaaaatcatccaatcattatatgcaggttgaaccataataaaccccttgaacacagtgatcctatgcttct 27288321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 16 - 371
Target Start/End: Complemental strand, 27628020 - 27627672
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||||||||    
T  27628020 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgaaagtg 27627922  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||    ||||||||||| ||| || || || |||||||  || |||||||||| |||| ||     ||||| ||||     |||||    
T  27627921 atattttctgtaaggg-cgcgtttgtttcggcattgccgttgatgaataaaa--attgtcgtttctttcacgactgctttttttttaagt---gcttttt 27627828  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
    |||||||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||| | |||||         |||||||||||||||    
T  27627827 tccttggaaataatggtaataccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaacccgcatg-aaaaaaaactctttctaaaatca 27627731  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgc 371  Q
    || ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  27627730 tccaatcattatatgcaggttgaaccataataaacccattgaacatagtaatcctatgc 27627672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 28163375 - 28163736
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc--aaaataacaatcctctcgctctgcccgaag 107  Q
    ||||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  28163375 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaaataacaatcctctcgctctgcccgaag 28163474  T
Q  108 cgaaagtgata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta 205  Q
    ||| ||||||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |||| | |||||    ||||    
T  28163475 cgacagtgatattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttatttttt---tttta 28163568  T
Q  206 -tg-ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----gnnnnnnnnnct 299  Q
     || ||||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    |         |     
T  28163569 gtgcttttttccttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaagaaaaaaaacca 28163667  T
Q  300 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     |||||||||||||  || ||||  |||||| |||||||||||||||||| ||||||||||||||||||    
T  28163668 ttttctaaaatcattcaaccattcaatgcagtttgaaccataataaacccgttgaacacagtaatccta 28163736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 29574895 - 29575243
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||| ||||||||||||||||| |||||| ||||    
T  29574895 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacgatcctctcgctctgcccaaagcgagagtg 29574993  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||  |  |||||  |||     |||||    
T  29574994 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgactacctttttttttagtgc---ttttt 29575088  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatc 311  Q
     ||||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          ||||||||||||||    
T  29575089 cccttggaaataatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatc 29575186  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29575187 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29575243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 8891789 - 8891508
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8891789 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8891690  T
Q  109 gaaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------ 201  Q
    |||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |          
T  8891689 gaaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgattttt 8891593  T
Q  202 tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  8891592 tttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 8891508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 10 - 287
Target Start/End: Complemental strand, 8903024 - 8902743
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttc-aaaataacaatcctctcgctctgcccgaagc 108  Q
    ||||||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8903024 catcatcattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaaataacaatcctctcgctctgcccgaagc 8902925  T
Q  109 gaaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaag------ 201  Q
    |||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |          
T  8902924 gaaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgattttt 8902828  T
Q  202 tttatgttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||| | |||||| |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||    
T  8902827 tttttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcat 8902743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 28209336 - 28209683
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  28209336 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 28209435  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  28209436 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 28209527  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttct-aaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||    
T  28209528 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaaat 28209625  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28209626 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28209683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 4774765 - 4775109
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||||||||||||| || |||||| ||||    
T  4774765 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgtccaaagcgagagtg 4774863  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  4774864 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 4774955  T
Q  213 tccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
     ||||||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||||    
T  4774956 cccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatc 4775052  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4775053 atccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4775109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 27487011 - 27487362
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27487011 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27487109  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggct--ttcactttttaaagtttatgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||  ||   ||||||  | ||   |||    
T  27487110 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaataaaattgt-gtcgtttcttccacgactacttttttttttagtgctt---ttt 27487204  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    |  ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||           |||||||||||    
T  27487205 tccccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaactctttctaaa 27487302  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27487303 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 27487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 16 - 372
Target Start/End: Complemental strand, 27270894 - 27270547
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| ||||  |||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  27270894 cattccttcaatcatgcatgtttccgagtaatgcgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 27270796  T
Q  116 atatttc-tataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||||||  | ||||||  | ||||||||||| ||| || || || ||||||||  | |||||||||| |||| ||  |  ||||| ||||     |||||    
T  27270795 atattttatgtaagggcat-gtttgtttcggcattgccgttgatgaataaaaa--ttgtcgtttctttcacgactg-cttttttttaagtgc---ttttt 27270703  T
Q  213 tccttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatc 311  Q
    | |||||||||||||||||| |||||||||| ||||||| ||||||||||  |||||||||||||||||||||||||         ||||||||||||||    
T  27270702 ttcttggaaataatggtaatgccagaaaaaaaccaaaacatctgtatttt--cttattaatttcaaaaatctgcatgaaaaaa---ctctttctaaaatc 27270608  T
Q  312 atctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgct 372  Q
    ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  27270607 atccaatcattatatgcaggttgaaccataataaacccattgaacacagtaatcctatgct 27270547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 30556330 - 30555984
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  30556330 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 30556232  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  30556231 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgcttt 30556140  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  30556139 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 30556042  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  30556041 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 30555984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 29503304 - 29503645
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| ||||||||||||| |||| |||||||| |||||||||||||||| |||||||||| ||||||  |||||||||     
T  29503304 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 29503402  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||  | ||||||  |||    |||||| ||||||    
T  29503403 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgacta-ctctttttttagt----gtttttcccttgg 29503495  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttctaaaatcatcta 316  Q
    ||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||            ||||||||||||||||| |    
T  29503496 aaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaactctttctaaaatcatcca 29503593  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29503594 atcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 29503645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 16676021 - 16676369
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  16676021 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 16676119  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  16676120 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 16676211  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg----nnnnnnnnnctctttctaaa 308  Q
     ||||||||| ||||||||| ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||             |||||||||||    
T  16676212 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtttgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaaactctttctaaa 16676309  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  16676310 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 16676369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 4544089 - 4543741
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4544089 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4543991  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  ||||| ||||  | ||||||||||||||| ||   ||||||     |||| || |||    
T  4543990 atattttctgtaaggg-catgtttgtttcggcattgccgttggttaat-aaaattttgtcgtttcttccacgact---actttt---cttttagtgcttt 4543899  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnctctttctaaa 308  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||| |||||||||||||||||           |||||||||||    
T  4543898 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattagtttcaaaaatctgcatgaaaaaaaaaagctctttctaaa 4543801  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  4543800 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 4543741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 10 - 368
Target Start/End: Complemental strand, 14142721 - 14142345
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  14142721 catcaacattcattcaatcatgcatgtttccgaataatgcgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 14142622  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||| ||||  ||||||||||||| |||| |||| | ||||||  |||| | |    
T  14142621 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaacaaaa--atcgtcgtttctttcacgacttttattttttagtgttttttt 14142525  T
Q  209 tttttc----------------cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat----- 287  Q
    ||||||                |||||||||||||||||||||||||||||||||||| ||| || |||||||||| ||||||||| | ||||||         
T  14142524 tttttcttttctttctttttttcttggaaataatggtaataccagaaaaaaccaaaacatcttta-tttttcttatcaatttcaaagaactgcataaaag 14142426  T
Q  288 gnnnnnnnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
              |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  14142425 aaaaaaaaaccattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 14142345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 4527168 - 4527513
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  4527168 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtactttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 4527266  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcac-tttttaaagtttatgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   || ||||| ||||     ||||    
T  4527267 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttaagt---gctttt 4527358  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttct-aaaat 310  Q
    | ||||||||  ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||| |||||    
T  4527359 tcccttggaagcaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaaat 4527455  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  4527456 catccaatcattatatgcaggttgaaccataataaatccgttgaacacagtaatccta 4527513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 22456418 - 22456152
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||| ||||  |||||||||||||    
T  22456418 cattcattcaatcatgcatgtttccgagtaatatgtcttgttgctaaagtgttttgtttttcaaaataacaatcctctcgttctgttcgaagcgaaagtg 22456319  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || || |||||||||  ||||||||||||| |||| |||| | |||||  |||     ||||||    
T  22456318 atattttctgtaaggg-catgtttgtttcggcatcgccgtttttaataaaa--atcgtcgtttctttcacgacttttattttttttagt---gctttttt 22456225  T
Q  214 ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |||||||||||| |||||| ||||||||||||||||| ||| |  |||||||||| || |||||| ||||||||    
T  22456224 ccttggaaataacggtaatgccagaaaaaaccaaaacatct-tcatttttcttatcaacttcaaagatctgcat 22456152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 22933187 - 22932856
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  22933187 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 22933088  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||||||||||   |||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  22933087 tctataaggg-catgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 22932996  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |||    
T  22932995 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaat 22932901  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  22932900 cattttacgcagattgaactataataaacccgttgggcacagtaa 22932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 23855632 - 23855301
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  23855632 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 23855533  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||||||||||   |||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  23855532 tctataaggg-catgtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 23855441  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |||    
T  23855440 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatccaat 23855346  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  23855345 cattttacgcagattgaactataataaacccgttgggcacagtaa 23855301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 26920269 - 26920601
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  26920269 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 26920368  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||    | ||||| ||||    
T  26920369 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactg---ctttttttagt----gcttttttcttg 26920460  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  26920461 gaaataatggtaatgccagaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 26920556  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  26920557 cattttacgcagattgaactataatgaacccgttgggcacagtaa 26920601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 27021028 - 27021364
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  27021028 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 27021127  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     ||||| |||||    
T  27021128 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaatttgtcgtttcttccacgact---gcttttt-tagt---gctttttcccttg 27021219  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||| ||||||||||||| |||    
T  27021220 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctccttctaaaatcatccaat 27021315  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || ||||||||||| ||||||||||| |||  ||| ||||||||    
T  27021316 cattttacgcagattgaactataataaacccgttgggcacggtaatcct 27021364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 15422624 - 15422292
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  15422624 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 15422525  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||| ||||||   |||||||||||| ||| ||||| ||||||||||| || |||||||||| |||| ||     ||||||     | | |||||||||||    
T  15422524 tctgtaaggg-catgtttgtttcggcattgccattgattaataaaaa-attgtcgtttctttcacgactgctttttttta----gtgtcttttttccttg 15422431  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  |||||||||||||||| |||||||||||          ||||||||||||||||| ||     
T  15422430 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttc-aaaatctgcat---aaaaaacctctttctaaaatcatccaac 15422337  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  15422336 cattttacgcagattgaactataataaacccgttgggcacagtaa 15422292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 27009612 - 27009960
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| |||||| ||||    
T  27009612 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgtttt-caaaataacaaccctctcgctctgcccaaagcgagagtg 27009710  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttt 210  Q
    ||| ||||| ||||||   || ||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || |||    
T  27009711 atattttctgtaaggg-catgcttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt----tttagtgcttt 27009801  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-----nnnnnnnnnct-ctttc 304  Q
    || ||||||||| ||||||||| ||||||||||||||||||||||||||     || |||||||||||||||||||||              || |||||    
T  27009802 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatt-----ttcttaatttcaaaaatctgcatgaaaaaaaaaaaaaactactttc 27009896  T
Q  305 taaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  27009897 taaaatcatccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 27009960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 26990780 - 26991113
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  26990780 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 26990879  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttttttcc 215  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| || |||||||||| |||| ||    ||||||    |||| ||  ||||||||    
T  26990880 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactg---cttttt----tttagtgccttttttcc 26990970  T
Q  216 ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||||||||||||||||| ||||||||||||||||  ||||||  ||||||||||||||||||||||||||||          |||||||||||||||||     
T  26990971 ttggaaataatggtaatgccagaaaaaaccaaaatatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatcc 26991065  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  26991066 aaccattttacgcagattgaactataataaacccgttgggcacagtaa 26991113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 368
Target Start/End: Complemental strand, 24302925 - 24302584
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| |||||| |||||||||||||||||||| |||||| ||||||||||    
T  24302925 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaatcacaatcctctcgctctgcccaaagcgagagtgatattt 24302826  T
Q  122 --ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-tcgtcgtttcttccacggctttcactttttaaagtttatgttttttcct 216  Q
      || ||||||  | ||||||||||| ||| || || ||||||||||| | | |||||||||| |||| ||   | ||||   |||     |||||||||    
T  24302825 ttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaaaattgtcgtttctttcacgactgctattttt---agtgc---ttttttcct 24302733  T
Q  217 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    |||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |    
T  24302732 tggaaataatggtaatgccagaaaaaaccaaaacatttgta--ttttcttattaatttcaaaaatctgcat--aaaaaaacctctttctaaaatcatcca 24302637  T
Q  317 atc-attatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    | | ||| || ||||||||| ||||||||||||| ||||||||||||| ||||    
T  24302636 accaattttacgcagattgagccataataaacccgttgaacacagtaacccta 24302584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 29551364 - 29551708
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-ttt 121  Q
    ||||||||||||||||| || |||| |  |||||||||| |||  |||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||    
T  29551364 tcaatcatgcatgtttctgagtaatataccttgttgcttgagtactttgttttccaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 29551463  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||   |||||||||||| ||| || || ||||||| ||| || |||||||| | |||| || |  |||||| ||||   | ||||| ||||||    
T  29551464 ctgtaaggg-catgtttgtttcggcattgccgttgattaatataaaaattgtcgtttccttcacgactgtttcttttt-aagtgcct-tttttcccttgg 29551560  T
Q  220 aaataatggtaataccag----aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatct 315  Q
    ||| ||||||||| ||||    ||||||||||||| |||||| |||||||||||||||||||||||||||||          |||||||||||||||||     
T  29551561 aaacaatggtaatgccagaaaaaaaaaaccaaaacatctgta-tttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatcc 29551656  T
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    || |||| || ||||||||||| ||||| ||||| |||  ||||||||||||    
T  29551657 aaccattttacgcagattgaactataatgaacccgttgggcacagtaatcct 29551708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 13297258 - 13296923
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  13297258 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 13297159  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga--tcgtcgtttcttccacggctttcactttttaaagtttatgttttttcct 216  Q
     || ||||||  | ||||||||||| ||| || || ||||||||||| |  | |||||||||| |||  ||     ||||||     ||  ||||||| |    
T  13297158 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaaaaattgtcgtttctttcacaactgcttttttttag----tacattttttc-t 13297065  T
Q  217 tggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatcta 316  Q
    |||||||||||||||| ||||||||||||||||| | ||||  ||||||||||||||||||||||||||||          ||||||||||||||||| |    
T  13297064 tggaaataatggtaatgccagaaaaaaccaaaacatttgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatcca 13296970  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  13296969 accattttacgcagattgaactataataaacccgttgggcacagtaa 13296923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 20162505 - 20162844
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| | ||  |||||||||| |||||||| || ||||  || ||| |||||||||||||     
T  20162505 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 20162602  T
Q  122 ctataagggttttgtttgtttcggtattcca-ttattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg-ttttttccttgg 219  Q
    || |||||   | ||||||||||| |||||  |||| ||||||||  | |||||||||| |||| ||||   ||||||   ||  || |||||||| |||    
T  20162603 ctgtaaggacat-gtttgtttcggcattcccgttatcaataaaaa--ttgtcgtttctttcacgactttttgtttttatttttagtgcttttttccctgg 20162699  T
Q  220 aaataatggtaataccag--aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-gnnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||||||||||| ||||  |||||||||| || ||||||  ||||||||||||||||||||||||||||           ||||||||||||||||| |    
T  20162700 aaataatggtaatgccagaaaaaaaaccaatacatctgta--ttttcttattaatttcaaaaatctgcataaaaaaaaaacctctttctaaaatcatcaa 20162797  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || |||||||||||||| |||||||| |||| ||||||||    
T  20162798 accattttacgcagattgaaccattataaacccgttgagcacagtaa 20162844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 22170326 - 22169987
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    |||||||||||||| ||||| |||| ||||||||||||||||| | ||  |||||||||| |||||||| || ||||  || ||| |||||||||||||     
T  22170326 tcaatcatgcatgtgtccgagtaatgtgtcttgttgcttaagtttgtt--ttttcaaaatgacaatcctttcactctatccaaagtgaaagtgatatttt 22170229  T
Q  122 ctataagggttttgtttgtttcggtattcca-ttattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg-ttttttccttgg 219  Q
    || |||||   | ||||||||||| |||||  |||| ||||||||  | |||||||||| |||| ||||   ||||||   ||  || |||||||| |||    
T  22170228 ctgtaaggacat-gtttgtttcggcattcccgttatcaataaaaa--ttgtcgtttctttcacgactttttgtttttatttttagtgcttttttccctgg 22170132  T
Q  220 aaataatggtaataccagaaaaaa--ccaaaacgtctgtattttttcttattaatttcaaaaatctgcat-gnnnnnnnnnctctttctaaaatcatcta 316  Q
    ||||||||||||| ||||||||||  |||| || ||||||||||  ||||||||||||||||||||||||           ||||||||||||||||| |    
T  22170131 aaataatggtaatgccagaaaaaaaaccaatacatctgtatttt--cttattaatttcaaaaatctgcataaaaaaaaaacctctttctaaaatcatcaa 22170034  T
Q  317 atcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    | |||| || |||||||||||||| |||||||| |||| ||||||||    
T  22170033 accattttacgcagattgaaccattataaacccgttgagcacagtaa 22169987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 363
Target Start/End: Original strand, 24865606 - 24865940
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    |||||||||||||| || || |||| |  |||||||||||||| | |||||||| |||||||  |||||||||||||||||| ||| || ||||||||||    
T  24865606 tcaatcatgcatgtgtctgagtaatataccttgttgcttaagtatcttgttttttcaaaatataaatcctctcgctctgcccaaagtgagagtgatattt 24865705  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatc-gtcgtttcttccacggctttcactttttaaagtttatg--ttttttcc 215  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  |  |||||||||| |||||||    ||||||    ||  ||  |||||| |    
T  24865706 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaaattttgtcgtttctttcacggctg---cttttt----ttggtgcttttttttc 24865797  T
Q  216 ttggaaataatggtaataccagaaaaaacc-aaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatc 314  Q
    ||||||||||||||||| |||||||||||| ||||| ||||||  |||||||||||||||| |||||||||||          |||||||||||||||||    
T  24865798 ttggaaataatggtaatgccagaaaaaaccaaaaacatctgta--ttttcttattaatttc-aaaatctgcat---aaaaaccctctttctaaaatcatc 24865891  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     || |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  24865892 caaccattttacgcagattgaactataataaacccgttgggcacagtaa 24865940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 23 - 121
Target Start/End: Original strand, 16751743 - 16751842
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttt-tcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||| |||||||||||||| ||||||||||||| |||||| ||||||||||    
T  16751743 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcatctcgctctgcccaaagcgagagtgatattt 16751842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 316 - 368
Target Start/End: Complemental strand, 34462525 - 34462473
Alignment:
Q  316 aatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  34462525 aatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 34462473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 8891486 - 8891419
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8891486 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8891419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 8902721 - 8902654
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  8902721 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 8902654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 252 - 365
Target Start/End: Original strand, 16751937 - 16752047
Alignment:
Q  252 tctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccat 351  Q
    ||||||||||||||||||||||||||||||||||||          ||||||||||||||||| || |||| || ||||||||||| ||||| ||||| |    
T  16751937 tctgtattttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaaccattttacgcagattgaactataatgaacccgt 16752033  T
Q  352 tgaacacagtaatc 365  Q
    ||  ||||||||||    
T  16752034 tgggcacagtaatc 16752047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 22456132 - 22456065
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||| ||||    
T  22456132 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaacccta 22456065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 3e-67; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 16206402 - 16206055
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16206402 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 16206303  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||   | ||||||||||||  ||||||||||||| ||||||||| | |||||    |||| ||  |||    
T  16206302 atattttctgtaaggg-catgtttgtttcggcatcgtcgttattaataaaa--atcgtcgtttctttcacggcttttatttttt----tttagtgctttt 16206210  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttc---aaaaatctgcatgnnnnnnnnnctctttctaa 307  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||   ||||||||||||           |||||||||    
T  16206209 tttccttggaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaaatctgcat----aaaaacatctttctaa 16206116  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||| || |||| || ||||||||| ||||||||||||| |||  |||||||| ||||    
T  16206115 aatcatccaaccattttacgcagattgagccataataaacccgttgggcacagtaacccta 16206055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 20339822 - 20339467
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  20339822 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 20339723  T
Q  116 atatttctataagggttttgtttgtttcggtatt-ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttt 212  Q
    ||||||||  |||||   |||||||||||| ||| || |||| |||||||  ||||||||||||| ||||||||| | | |||    | || || |||||    
T  20339722 atatttctggaaggg-cgtgtttgtttcggcattcccgttatcaataaaa--atcgtcgtttctttcacggcttttattattttttttctagtgcttttt 20339626  T
Q  213 tc---cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt----caaaaatctgcatgnnnnnnnnnctctttct 305  Q
    ||   |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     ||||||||||||          ||||||||    
T  20339625 tctctcttggaaataatggtaataccagaaaaaaccaaaacatctgtatttttt-ttattaatttaaaaaaaaaatctgcat---aaaaaacctctttct 20339530  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| || |||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  20339529 aaaatcatccaaccattttacgcagattgaaccataataaacccgttgaacacagtaacccta 20339467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 16 - 370
Target Start/End: Complemental strand, 41791679 - 41791332
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  41791679 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 41791581  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt--attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||| ||||| ||||||   |||||||||||| ||| || ||  || |||||||  || ||||||||||||||| ||   |||||||    |||| || ||    
T  41791580 atattttctgtaaggg-cgtgtttgtttcggcattgccgtttgatgaataaaa--attgtcgtttcttccacgact---acttttt----tttagtgctt 41791491  T
Q  211 tttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaa 309  Q
    || ||||||||| ||||||||| ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||          ||||||||||||    
T  41791490 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaacaactctttctaaaa 41791393  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatg 370  Q
    ||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||||    
T  41791392 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcctatg 41791332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 10964561 - 10964899
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| ||||||||||||| |||| || ||||| |||||||||||||||| |||||||||| ||||||  |||||||||     
T  10964561 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgcttcgtttt-caaaataacaatcctcccgctctgcccaaagcgagggtgatatttt 10964659  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttttttccttg 218  Q
    || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||||||| |||||    
T  10964660 ctgtaagggcat-gtttgtttcggcattgccgttgattaataaaacttt-gtcgtttcttccacgact---acttttttt--tttagtgtttttcccttg 10964752  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         ||||||||||||||||| |||    
T  10964753 gaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatcatccaat 10964849  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10964850 cattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10964899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 28152624 - 28152986
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28152624 catcaacattcattcaatcatgcatgtttccgaataatgtgtcttgttgcttaagtgttttgtttttcaaaataaccatcctctcgctctgcccgaagcg 28152723  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggc---tttcactttttaaag---- 201  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||||||||  || |||||||||| |||| |   |||   |||||  ||        
T  28152724 aaagtgatatttctggaaggg-cgtgtttgtttcggcatcgccgttattaataaaa--attgtcgtttctttcacgacttttttttttttttttagtgct 28152820  T
Q  202 -tttatgttttttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttc--aaaaatctgcatgnnnnnnnnn 297  Q
     ||| | ||||||  | ||||||||||||||| |||| ||||||||||||| ||||||  ||||||||||||||||  ||||||||||||              
T  28152821 ttttttttttttttttgggaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaaaatctgcat---aaaaaac 28152915  T
Q  298 ctctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |  |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  28152916 cattttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 28152986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 22 - 368
Target Start/End: Original strand, 10946969 - 10947311
Alignment:
Q  22 ttcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgata-tt 120  Q
    |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||||| ||    
T  10946969 ttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatattt 10947067  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttttcct 216  Q
    ||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| || ||||| |||    
T  10947068 tctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt---ttttagtgctttttccct 10947159  T
Q  217 tggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttctaaaatcatc 314  Q
    |||||| ||||||||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||||||||||||    
T  10947160 tggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaatcatc 10947257  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
     ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10947258 caatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10947311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 16 - 287
Target Start/End: Original strand, 20462865 - 20463133
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||||||||||| |||| ||||||||||||||||| |  | ||||||||||||||||||||||||||||||||||||||||||||    
T  20462865 cattccttcaatcatgcatgtttccgagtaatgtgtcttgttgcttaagtttcgt-tttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 20462963  T
Q  116 ata-tttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgtttttt 213  Q
    ||| ||||| ||||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| ||||||||| | |||||  | ||  ||  ||||    
T  20462964 atattttctgtaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacggcttttattttttttatttagtgcctttt 20463060  T
Q  214 ccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||||  |||||||||| | |||||||||||||||    
T  20463061 ccttggaaataatggtaatgccagaaaaaaaccaaaacatctgta--ttttcttattgaattcaaaaatctgcat 20463133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 28586865 - 28587219
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  28586865 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 28586963  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagt-ttatgtttt 211  Q
    ||| ||||| ||| ||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| | | |  |||||  |||  | | ||||    
T  28586964 atattttctgtaaagggcatgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgac-tactttttttttagtgctttttttt 28587061  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---nnnnnnnnnctctttctaaa 308  Q
    | ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||            |  ||||||||    
T  28587062 tcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaaaccattttctaaa 28587159  T
Q  309 atcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  28587160 atcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 28587219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 23 - 368
Target Start/End: Original strand, 51640109 - 51640452
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |||||||||||||   || |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||     
T  51640109 tcaatcatgcatgtttctgagtaatgtgtcttgttgctttgatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 51640207  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatta-ttaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttgg 219  Q
    || ||||||  | ||||||||||| ||| || ||  |||||||||   | ||||||||||||||| ||   |||||||  |||     ||||| ||||||    
T  51640208 ctgtaagggcat-gtttgtttcggcattgccgttggttaataaaatttt-gtcgtttcttccacgact---actttttttagtgc---tttttcccttgg 51640299  T
Q  220 aaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn------ctctttctaaaatcat 313  Q
    ||| ||||||||| ||||||||||||||||| | ||||||||  |||||||||||||||||||||||||               ||||||||||||||||    
T  51640300 aaacaatggtaatgccagaaaaaaccaaaacatttgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactctttctaaaatcat 51640397  T
Q  314 ctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    | ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  51640398 ccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 51640452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 126; Significance: 7e-65; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 126; E-Value: 7e-65
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 2145 - 1790
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  2145 cattccttcaatcatgcatgtttccgaataatgtgtcttgttgattaaatgttttgtttttcaaaataaccatcctctcgctcggcccgaagcgaaagtg 2046  T
Q  116 atatttctataagggttttgtttgtttcggtatt-ccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg-ttttt 212  Q
    ||||||||  |||||   |||||||||||| ||| || |||| |||||||  ||||||||||||| ||||||||| | | |||    | || || |||||    
T  2045 atatttctggaaggg-cgtgtttgtttcggcattcccgttatcaataaaa--atcgtcgtttctttcacggcttttattattttttttctagtgcttttt 1949  T
Q  213 tc---cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaattt----caaaaatctgcatgnnnnnnnnnctctttct 305  Q
    ||   |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||     ||||||||||||          ||||||||    
T  1948 tctctcttggaaataatggtaataccagaaaaaaccaaaacatctgtatttttt-ttattaatttaaaaaaaaaatctgcat---aaaaaacctctttct 1853  T
Q  306 aaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||| || |||| || ||||||||||||||||||||||| ||||||||||||| ||||    
T  1852 aaaatcatccaaccattttacgcagattgaaccataataaacccgttgaacacagtaacccta 1790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0748 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0748
Description:

Target: scaffold0748; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 202 - 375
Target Start/End: Complemental strand, 6861 - 6685
Alignment:
Q  202 tttatgttttttccttggaaataatggtaataccagaaaaaa-ccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg--nnnnnnnnnc 298  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||           |    
T  6861 tttatgctttttccttggaaataatggtaataccagaaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgaaaaaaaaaagc 6762  T
Q  299 tctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 375  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6761 tctttctaaaatcatccaatcattatatgcagattgaaccataataaacccattgaacacagtaatcctatgcttct 6685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 10 - 288
Target Start/End: Complemental strand, 119433 - 119162
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||| |||||||||||||  |||||| | || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  119433 catcaacattccttcaatcatgcataattccgagtgatgtgtcttgttgcttaagtgtttcgtttttcaaaataacaatcctctcgctctgcccgaggcg 119334  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   |||||||||||| ||  || ||||||||||||  ||||||||||||| ||||||||| | ||||||  | ||   |    
T  119333 aaagtgatatttctgaaaggg-catgtttgtttcggcatcgccgttattaataaaa--atcgtcgtttctttcacggctttta-tttttagtgctt---t 119241  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg 288  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| || |||||||||||||||||||| |||||||||    
T  119240 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcttattaatttcaaagatctgcatg 119162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 301 - 368
Target Start/End: Complemental strand, 119145 - 119078
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  119145 tttctaaaatcattcaaccattctacgcagtttgaaccataataaacccgttgaacacagtaacccta 119078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0415 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0415
Description:

Target: scaffold0415; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 7900 - 8243
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  7900 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 7998  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  ||||    || ||    
T  7999 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt-tagtt--gcttctt 8090  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatca 312  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||         |||||||||||||||    
T  8091 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatg-aaaaaaaactctttctaaaatca 8187  T
Q  313 tctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    || ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  8188 tccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 8243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 9834 - 10181
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| |||| ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  9834 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttagtgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 9933  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||  |||     |||||    
T  9934 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---actttttttagt---gcttttt 10025  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg-nnnnnnnnnctctttct-aaaat 310  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||          |||||||| |||||    
T  10026 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaaat 10123  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  10124 catccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 10181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 16 - 367
Target Start/End: Complemental strand, 13301 - 12953
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| |||||||||| || | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  13301 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgttttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 13203  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||| |  |||||    |||| || |||    
T  13202 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgacttacttttttt----tttagtgcttt 13109  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn-ctctttctaaaa 309  Q
    |||| ||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||          ||||||||||||    
T  13108 ttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaactctttctaaaa 13011  T
Q  310 tcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  13010 tcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatcct 12953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 119; Significance: 1e-60; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 10 - 368
Target Start/End: Original strand, 22277 - 22627
Alignment:
Q  10 catcatcattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcg 109  Q
    ||||| ||||| |||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  22277 catcaacattccttcaatcatgcataattccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagca 22376  T
Q  110 aaagtgatatttctataagggttttgtttgtttcggtat-tccattattaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgt 208  Q
    ||||||||||||||  |||||   ||||| |||||| ||  || ||||||||||||  ||||||||||||| |||| |||| | ||||   |||     |    
T  22377 aaagtgatatttctggaaggg-cgtgtttatttcggcatcgccgttattaataaaa--atcgtcgtttctttcacgacttttattttt---agt---gct 22467  T
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctc-tttctaa 307  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||| || |||||| ||||||||||||| ||||||||          | | |||||||    
T  22468 tttttccttggaaataatggtaatgccagaaaaaaccaaaacatcttta-tttttcctattaatttcaaagatctgcataaaaaaaaaacccttttctaa 22566  T
Q  308 aatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||  || |||| || |||| |||||||||||||||||| ||||||||||||| ||||    
T  22567 aatcattcaaccattttacgcagtttgaaccataataaacccgttgaacacagtaacccta 22627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0336 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0336
Description:

Target: scaffold0336; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 368
Target Start/End: Original strand, 11451 - 11803
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgctt-aagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagt 114  Q
    ||||| |||||||||||||||||| || ||||  |||||||||||| || || |||||||| ||||||||||||||||||||||||||| |||||| ||     
T  11451 cattccttcaatcatgcatgtttctgagtaatgcgtcttgttgctttaaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagc 11549  T
Q  115 gatattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgttt 210  Q
    ||||||| || ||||||  | ||||||||||| ||| ||||| ||||||||||   | ||||| ||||||||| ||   |||||||    |||| || ||    
T  11550 gatattttctgtaagggcat-gtttgtttcggcattgccattgattaataaaatttt-gtcgtctcttccacgact---acttttt----tttagtgctt 11640  T
Q  211 ttt--ccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn-----ctcttt 303  Q
    |||  ||||||||| ||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||              ||||||    
T  11641 ttttcccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaactcttt 11738  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11739 ctaaaatcatccaatcattatatgcagattgaaccataataaacccgttgaacacagtaatccta 11803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 24572 - 24215
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  24572 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 24474  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttt 212  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||  |  |||||  ||  |   |||||    
T  24473 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgactacctttttttttag--tgctttttt 24378  T
Q  213 tccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatg---------nnnnnnnnnctcttt 303  Q
     ||||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||| |||||||||                  ||||||    
T  24377 cccttggaaacaatggtaatgccagaaaaaaccaaaacgtctgta--ttttcttattaatttcaaagatctgcatgaaaaaaaaaaaaaaaaaactcttt 24280  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  24279 ctaaaatcatccaatcattatatgcaggttgaaccataataaaccctttgaacacagtaatccta 24215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159 (Bit Score: 99; Significance: 9e-49; HSPs: 4)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 7560 - 7203
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  7560 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 7461  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  7460 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttttagtgcctt 7366  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn-------ctcttt 303  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||                ||||||    
T  7365 ttcccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactcttt 7268  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  7267 ctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 7203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 16 - 368
Target Start/End: Complemental strand, 21113 - 20756
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||  || |||| ||||||||||||| | || ||||||||  ||||||||||| |||||||||||||| |||||| ||||    
T  21113 cattccttcaatcatgcatgtttttgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaattctctcgctctgcccaaagcgagagtg 21014  T
Q  116 atattt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    |||||| || ||||||  | ||||||||||| ||| || || ||||||||||   | ||||||||||||||| ||   |||||||    |||| ||  ||    
T  21013 atattttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaatttt-gtcgtttcttccacgact---acttttttttttttagtgcctt 20919  T
Q  212 ttcc-ttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn-------ctcttt 303  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||                ||||||    
T  20918 ttcccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaaactcttt 20821  T
Q  304 ctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  20820 ctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 20756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 209 - 368
Target Start/End: Original strand, 21665 - 21828
Alignment:
Q  209 tttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnn------ctctt 302  Q
    |||| ||||||||| ||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||               |||||    
T  21665 ttttcccttggaaacaatggtaatgccagaaaaaaccaaaatgtctgtatttt--cttattaatttcaaaaatctgcatgaaaaaaaaaaaaaaactctt 21762  T
Q  303 tctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  21763 tctaaaatcatccaatcattatatgcaggttgaaccataataaacccgttgaacacagtaatccta 21828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0159; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 16 - 275
Target Start/End: Original strand, 11416 - 11673
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || ||||||||  |||||||||||||||||||||||||| |||||| ||||    
T  11416 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgttttcaaaaataacaatcctctcgctctgcccaaagcgagagtg 11515  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatg---tt 209  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| ||   |||||||    |||| |   ||    
T  11516 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaattttgtcgtttcttccacgact---acttttt--tttttaagtgctt 11608  T
Q  210 ttttccttggaaataatggtaataccag-aaaaaaccaaaacgtctgtattttttcttattaatttc 275  Q
    ||| ||||||||| ||||||||| |||| ||||||||||||||||||||  ||||||||||||||||    
T  11609 tttcccttggaaacaatggtaatgccagaaaaaaaccaaaacgtctgta--ttttcttattaatttc 11673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 23 - 349
Target Start/End: Original strand, 29185 - 29506
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatattt 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | |||||||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  29185 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattt 29284  T
Q  122 -ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
     || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||  |||     |||||||||||    
T  29285 tctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactg---ctttttttagtgccctttttttccttg 29380  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  29381 gaaataatggtaatgccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 29475  T
Q  319 cattatatgcagattgaaccataataaaccc 349  Q
    |||| || ||||||||||| |||||||||||    
T  29476 cattttacgcagattgaactataataaaccc 29506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 301 - 368
Target Start/End: Original strand, 7141 - 7208
Alignment:
Q  301 tttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    |||||||||||||  || |||| ||||||| |||||||||||||||||| ||||||||||||||||||    
T  7141 tttctaaaatcattcaaccattctatgcagtttgaaccataataaacccgttgaacacagtaatccta 7208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 208 - 287
Target Start/End: Original strand, 7040 - 7120
Alignment:
Q  208 ttttttcctt-ggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttc-ttattaatttcaaaaatctgcat 287  Q
    |||||||||| |||||||||| |||||||||||||||||||||| ||| ||||||||| |||| ||||||||| | ||||||    
T  7040 ttttttcctttggaaataatg-taataccagaaaaaaccaaaacatctttattttttctttatcaatttcaaagaactgcat 7120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 16 - 121
Target Start/End: Complemental strand, 45987 - 45882
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| ||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45987 cattccttcaatcatgcatatttccgagtaatgtgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 45888  T
Q  116 atattt 121  Q
    ||||||    
T  45887 atattt 45882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 23 - 367
Target Start/End: Original strand, 32344 - 32690
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgttttt----caaaataacaatcctctcgctctgcccgaagcgaaagtgata 118  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||    ||||||||||||||||||||||||||| |||||| |||||||    
T  32344 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttttttcaaaataacaatcctctcgctctgcccaaagcgagagtgata 32443  T
Q  119 ttt-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tg--ttttt 212  Q
    ||| || ||||||  | ||||||||||| ||| || || |||||||||||  | ||||||||||||||| ||    ||||||    |||| ||  |||||    
T  32444 ttttctgtaagggcat-gtttgtttcggcattgccgttgattaataaaaattttgtcgtttcttccacgactgcttcttttt----tttagtgccttttt 32538  T
Q  213 tccttggaaataatggtaataccag--aaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaat 310  Q
    |||||||||||||||||||| ||||  ||||||| ||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||    
T  32539 tccttggaaataatggtaatgccagaaaaaaaacaaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaat 32633  T
Q  311 catctaatcattatatgcagattgaaccataataaacccattgaacacagtaatcct 367  Q
    |||| || |||| || ||||||||||| ||||||||||| |||  ||||||||||||    
T  32634 catccaaccattttacgcagattgaactataataaacccgttgggcacagtaatcct 32690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 86; Significance: 5e-41; HSPs: 3)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 45349 - 45020
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatatt-- 120  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| |||||||||      
T  45349 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatattta 45250  T
Q  121 tctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagtttatgttttttccttg 218  Q
    ||| ||||||   |||||||||||| ||| || || |||||||||||  | |||||||||| |||| ||    |||||   |||     ||||| |||||    
T  45249 tctgtaaggg-catgtttgtttcggcattgccgttgattaataaaaaatttgtcgtttctttcacgact---gctttt---agt---gctttttcccttg 45160  T
Q  219 gaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatctaat 318  Q
    |||||||||||||| | ||||||||||||||| ||||||  ||||||||||||||||||||||||||||          ||||||||||||||||| ||     
T  45159 gaaataatggtaatgctagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaccctctttctaaaatcatccaac 45065  T
Q  319 cattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
    |||| || ||||||||||| ||||||||||| |||  ||||||||    
T  45064 cattttacgcagattgaactataataaacccgttgggcacagtaa 45020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 23 - 363
Target Start/End: Complemental strand, 38433 - 38095
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaa-gtgttttgttttt-caaaataacaatcctctcgctctgcccgaagcgaaagtgatatt 120  Q
    ||||||||||||||||| || |||| |  |||||||||||| || | |||||||| ||||||||||||||||  ||||||||| |||||| |||||||||    
T  38433 tcaatcatgcatgtttctgagtaatataccttgttgcttaaagtatcttgttttttcaaaataacaatcctcctgctctgcccaaagcgagagtgatatt 38334  T
Q  121 t-ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacg---gctttcactttttaaagtttatgttttttc 214  Q
    | || ||||||    ||||||||||| ||| || || ||||||||||| || |||||||||| ||||   |||||   ||||||  | || | |||||||    
T  38333 ttctgtaagggcac-gtttgtttcggcattgccgttgattaataaaaa-attgtcgtttctttcacgactgctttt--tttttagtgctttt-ttttttc 38239  T
Q  215 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcatgnnnnnnnnnctctttctaaaatcatc 314  Q
    |||||||||||||||||| ||||||||||||||||| ||||||  ||||||||||||||||||||||||||||          |||||||||||||||||    
T  38238 cttggaaataatggtaatcccagaaaaaaccaaaacatctgta--ttttcttattaatttcaaaaatctgcat---aaaaaacctctttctaaaatcatc 38144  T
Q  315 taatcattatatgcagattgaaccataataaacccattgaacacagtaa 363  Q
     || |||| || ||||||||||| ||||| ||||| |||  ||||||||    
T  38143 caaccattttacgcagattgaactataatgaacccgttgggcacagtaa 38095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 23 - 287
Target Start/End: Original strand, 31649 - 31913
Alignment:
Q  23 tcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtgatattt- 121  Q
    ||||||||||||||||| || |||| |  |||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||| ||||||||||     
T  31649 tcaatcatgcatgtttctgagtaatataccttgttgcttaagtatcttgtttttcaaaataacaatcctctcgctctgcccaaagcgagagtgatatttt 31748  T
Q  122 ctataagggttttgtttgtttcggtatt-ccatt-attaataaaaaga-----tcgtcgtttcttccacggctttcactttttaaagtttatgttttttc 214  Q
    || ||||||    ||||||||||| ||| || || ||||||||||| |     | |||||||||| |||| ||   | ||||   |||     |||||||    
T  31749 ctgtaagggcac-gtttgtttcggcattgccgttgattaataaaaaaaatttgttgtcgtttctttcacgactgctattttt---agtgc---ttttttc 31841  T
Q  215 cttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttctta-ttaatttcaaaaatctgcat 287  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  31842 cttggaaataatggtaatgccataaaaaaccaaaacatctgta--ttttcttatttaatttcaaaaatctgcat 31913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0350 (Bit Score: 81; Significance: 5e-38; HSPs: 1)
Name: scaffold0350
Description:

Target: scaffold0350; HSP #1
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 16 - 287
Target Start/End: Complemental strand, 5608 - 5345
Alignment:
Q  16 cattcattcaatcatgcatgtttccgaataatttgtcttgttgcttaagtgttttgtttttcaaaataacaatcctctcgctctgcccgaagcgaaagtg 115  Q
    ||||| |||||||||||||||||| || |||| ||||||||||||| | || |||||||| ||||||||||||||||||||||||||| |||||| ||||    
T  5608 cattccttcaatcatgcatgtttctgagtaatgtgtcttgttgctttaatgctttgtttt-caaaataacaatcctctcgctctgcccaaagcgagagtg 5510  T
Q  116 ata-tttctataagggttttgtttgtttcggtatt-ccatt-attaataaaaagatcgtcgtttcttccacggctttcactttttaaagttta-tgtttt 211  Q
    ||| ||||| ||||||   |||||||||||| ||| || || |||||| ||||  | ||||||||||||||| |||  |||||||    |||| || |||    
T  5509 atattttctgtaaggg-catgtttgtttcggcattgccgttgattaat-aaaactttgtcgtttcttccacgactt--acttttt----tttagtgcttt 5418  T
Q  212 ttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttcttattaatttcaaaaatctgcat 287  Q
    |||| | | |||||||||||| ||||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  5417 ttcccttg-aataatggtaatgccagaaagaaccaaaacgtctgta--ttttcttattaatttcaaaaatctgcat 5345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 208 - 287
Target Start/End: Complemental strand, 20371 - 20293
Alignment:
Q  208 ttttttccttggaaataatggtaataccagaaaaaaccaaaacgtctgtattttttctta-ttaatttcaaaaatctgcat 287  Q
    ||||||||||||||||||||||||| ||| ||||||||||||| ||||||  |||||||| ||||||||||||||||||||    
T  20371 ttttttccttggaaataatggtaatgccataaaaaaccaaaacatctgta--ttttcttatttaatttcaaaaatctgcat 20293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 368
Target Start/End: Original strand, 8209 - 8277
Alignment:
Q  300 ctttctaaaatcatctaatcattatatgcagattgaaccataataaacccattgaacacagtaatccta 368  Q
    ||||||||||||||| || |||| || ||||||||| ||||| ||||||| |||  |||||||| ||||    
T  8209 ctttctaaaatcatccaaccattttacgcagattgagccatagtaaacccgttgggcacagtaacccta 8277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University