View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5746_low_42 (Length: 358)

Name: NF5746_low_42
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5746_low_42
NF5746_low_42
[»] chr7 (7 HSPs)
chr7 (13-342)||(3237342-3237677)
chr7 (271-341)||(7399821-7399891)
chr7 (68-125)||(21164765-21164822)
chr7 (84-142)||(12653335-12653393)
chr7 (77-131)||(44941414-44941468)
chr7 (81-129)||(3337272-3337320)
chr7 (66-142)||(40187626-40187702)
[»] chr1 (16 HSPs)
chr1 (272-341)||(31963044-31963113)
chr1 (270-341)||(44698018-44698089)
chr1 (68-142)||(44068853-44068927)
chr1 (277-341)||(27262796-27262860)
chr1 (275-341)||(42592735-42592801)
chr1 (70-110)||(45885317-45885357)
chr1 (270-325)||(26761237-26761292)
chr1 (66-117)||(48131243-48131294)
chr1 (70-140)||(19396183-19396253)
chr1 (93-135)||(34599916-34599958)
chr1 (275-341)||(44529249-44529315)
chr1 (272-324)||(12807036-12807087)
chr1 (66-118)||(30678827-30678879)
chr1 (77-141)||(31962453-31962517)
chr1 (66-142)||(33153870-33153946)
chr1 (273-309)||(42479466-42479502)
[»] chr6 (8 HSPs)
chr6 (270-342)||(30326661-30326733)
chr6 (242-341)||(2248671-2248770)
chr6 (273-341)||(342938-343006)
chr6 (66-109)||(7979746-7979789)
chr6 (270-341)||(24396825-24396896)
chr6 (66-131)||(16890449-16890514)
chr6 (273-341)||(31597575-31597643)
chr6 (94-142)||(35110077-35110125)
[»] chr8 (10 HSPs)
chr8 (270-341)||(32615823-32615894)
chr8 (270-337)||(29912126-29912193)
chr8 (270-341)||(38813709-38813780)
chr8 (270-337)||(42964773-42964839)
chr8 (84-140)||(13958824-13958880)
chr8 (270-341)||(13521759-13521830)
chr8 (270-341)||(13611294-13611365)
chr8 (274-341)||(26738526-26738593)
chr8 (280-341)||(41909447-41909508)
chr8 (90-142)||(7839108-7839160)
[»] chr4 (7 HSPs)
chr4 (273-337)||(11123453-11123517)
chr4 (273-341)||(37626931-37626999)
chr4 (272-341)||(26009732-26009801)
chr4 (270-324)||(23568062-23568116)
chr4 (275-337)||(42098913-42098975)
chr4 (66-107)||(20096295-20096336)
chr4 (66-107)||(41897578-41897619)
[»] chr5 (8 HSPs)
chr5 (270-341)||(844800-844871)
chr5 (270-341)||(19608763-19608834)
chr5 (66-138)||(1512850-1512922)
chr5 (66-142)||(3156529-3156605)
chr5 (66-142)||(10199014-10199090)
chr5 (65-140)||(11017170-11017245)
chr5 (70-107)||(2642788-2642825)
chr5 (66-119)||(20370143-20370196)
[»] chr3 (3 HSPs)
chr3 (270-337)||(31732131-31732198)
chr3 (82-140)||(41113187-41113245)
chr3 (66-134)||(48376830-48376898)
[»] chr2 (8 HSPs)
chr2 (271-337)||(11074559-11074625)
chr2 (65-119)||(41939121-41939175)
chr2 (239-336)||(40142006-40142103)
chr2 (77-142)||(40797370-40797435)
chr2 (272-324)||(8741046-8741098)
chr2 (68-119)||(34364508-34364559)
chr2 (65-139)||(20239337-20239411)
chr2 (272-341)||(1944731-1944798)
[»] scaffold0161 (1 HSPs)
scaffold0161 (77-142)||(26704-26769)
[»] scaffold0074 (1 HSPs)
scaffold0074 (270-338)||(29748-29816)
[»] scaffold0445 (1 HSPs)
scaffold0445 (65-142)||(4464-4541)


Alignment Details
Target: chr7 (Bit Score: 236; Significance: 1e-130; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 13 - 342
Target Start/End: Complemental strand, 3237677 - 3237342
Alignment:
Q  13 aatatatattgagaggggttcttaaccctattgaaagagtaaactttgagtaatcctcgtgagattaacttagttggcagggataatgcataataaatat 112  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| |    
T  3237677 aatatatattgagaggggttcttaaccctattgaaagagtaaactttgagtaatccccgtgagattaactcagttggcagagataatgcataataaatgt 3237578  T
Q  113 aaggtttaaggttcgaatcccgaacaccacnnnnnnnga------agagtaaatcttgagctcaatatcgtgaacgacaaaccaaagagaaacaattatt 206  Q
    ||||| | ||||||||||||||||||||||        |      |||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3237577 aaggtctgaggttcgaatcccgaacaccacaaaaaaaaagaaaaaagagtaaatcttgagctcaatatcgtgaacgacagaccaaagagaaacaattatt 3237478  T
Q  207 tatatacactttcgagagaaacgcataattaaagaaatgctaacaagtgcccttttcctcaatggcacttgataagaagtttaaaatgcaaattttatct 306  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||| ||||||||||||||||||||||||    
T  3237477 tatatacactttcgagagaaacacataattaaagaaatgctaacaagtgccctttgtctcaatgacacttgataaaaagtttaaaatgcaaattttatct 3237378  T
Q  307 tggattttgtgtattcaacctattgaaacattaaag 342  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3237377 tggattttgtgtattcaacctattgaaacatcaaag 3237342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 341
Target Start/End: Original strand, 7399821 - 7399891
Alignment:
Q  271 gcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||||||||||||||| || ||  |||||||||||  |||| ||||||||  ||||||||||||||    
T  7399821 gcacttgataagaagtttaaagtggaaggtttatcttggaagttgtttattcaacacattgaaacattaaa 7399891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 21164822 - 21164765
Alignment:
Q  68 ctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggtt 125  Q
    |||||||| |||||| |||||| | ||||||||||||||| ||||||||||| |||||    
T  21164822 ctcgtgagcttaactcagttggtatggataatgcataatatatataaggtttgaggtt 21164765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 142
Target Start/End: Original strand, 12653335 - 12653393
Alignment:
Q  84 agttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||||||||||||||||||||||  |||||||  |||| |||| ||| |||||||    
T  12653335 agttggcagggataatgcataataaatgcaaggtttggggtttgaattccggacaccac 12653393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 131
Target Start/End: Complemental strand, 44941468 - 44941414
Alignment:
Q  77 ttaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatc 131  Q
    |||||| |||||| ||||||||||||||||| ||  |||||||||||||| ||||    
T  44941468 ttaactcagttggtagggataatgcataatatatgcaaggtttaaggttcaaatc 44941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Complemental strand, 3337320 - 3337272
Alignment:
Q  81 cttagttggcagggataatgcataataaatataaggtttaaggttcgaa 129  Q
    ||||||||| || || |||||||||||||| ||||||| ||||||||||    
T  3337320 cttagttggtagagacaatgcataataaatgtaaggttcaaggttcgaa 3337272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 40187702 - 40187626
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    ||||| |||| |||||| |||||| ||||| ||||||||||| || |||||| |  ||||| || ||||||||||||    
T  40187702 tcctcatgagcttaactcagttggtagggacaatgcataatatatgtaaggtctgcggttcaaaccccgaacaccac 40187626  T

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Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 31963113 - 31963044
Alignment:
Q  272 cacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||||||||||||||||| ||||||| | ||||| ||||||||||||||  ||||||||||||||    
T  31963113 cacttgataagaagtttaaaatggaaattttgttttggaatttgtgtattcaacacattgaaacattaaa 31963044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 44698018 - 44698089
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||| ||||||||| || || ||||||||||||  ||||||||||||| |||||||||||||||    
T  44698018 ggcacttgataataagtttaaagtggaagttttatcttggaagttgtgtattcaacatattgaaacattaaa 44698089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 142
Target Start/End: Original strand, 44068853 - 44068927
Alignment:
Q  68 ctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||| ||||||||||||| || |||||||||||||| || ||| |||| |||||||||||||| |||||||    
T  44068853 ctcgtgagcttaacttagttggtagagataatgcataatacatttaatgtttgaggttcgaatcccggacaccac 44068927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 277 - 341
Target Start/End: Complemental strand, 27262860 - 27262796
Alignment:
Q  277 gataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||||||||| ||||||| |||| || ||||||||||||||  ||| ||||||||||    
T  27262860 gataagaagtttaaaatggaaattttgtcttagaatttgtgtattcaacacattaaaacattaaa 27262796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 275 - 341
Target Start/End: Complemental strand, 42592801 - 42592735
Alignment:
Q  275 ttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||||||||||| || ||  |||||||||||  |||||||||||||| |||||||| |||||    
T  42592801 ttgataagaagtttaaagtggaaggtttatcttggaagttgtgtattcaacccattgaaacgttaaa 42592735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 70 - 110
Target Start/End: Complemental strand, 45885357 - 45885317
Alignment:
Q  70 cgtgagattaacttagttggcagggataatgcataataaat 110  Q
    |||||| ||||||||||||||| ||||||||||||||||||    
T  45885357 cgtgagtttaacttagttggcaaggataatgcataataaat 45885317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 26761292 - 26761237
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaac 325  Q
    |||| ||||||||| |||||||||| ||||||||||||  | ||||||||||||||    
T  26761292 ggcatttgataagaggtttaaaatgaaaattttatcttaaaatttgtgtattcaac 26761237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 117
Target Start/End: Complemental strand, 48131294 - 48131243
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggt 117  Q
    |||||||||| |||||| ||||||||| |||||||||||||| || ||||||    
T  48131294 tcctcgtgagtttaactcagttggcagagataatgcataatatatgtaaggt 48131243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 140
Target Start/End: Complemental strand, 19396253 - 19396183
Alignment:
Q  70 cgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacacc 140  Q
    |||||| |||||| |||||| ||||||||||||||||| ||  ||||||| | ||| |||||||| |||||    
T  19396253 cgtgagtttaactcagttggtagggataatgcataatatatgcaaggtttgatgtttgaatcccggacacc 19396183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 135
Target Start/End: Complemental strand, 34599958 - 34599916
Alignment:
Q  93 ggataatgcataataaatataaggtttaaggttcgaatcccga 135  Q
    ||||||||||||||| |||||||||||  ||||||||||||||    
T  34599958 ggataatgcataatatatataaggtttggggttcgaatcccga 34599916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 341
Target Start/End: Original strand, 44529249 - 44529315
Alignment:
Q  275 ttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||||||||||| || || |||||||||  |  ||||||||||||| |||| ||||||||||    
T  44529249 ttgataagaagtttaaagtggaagttttatcttaaaagttgtgtattcaacatattaaaacattaaa 44529315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 12807087 - 12807036
Alignment:
Q  272 cacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaa 324  Q
    ||||||||||||||||||||||| ||| ||||||||||| ||| | |||||||    
T  12807087 cacttgataagaagtttaaaatg-aaaatttatcttggaatttttatattcaa 12807036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 30678879 - 30678827
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtt 118  Q
    |||||||||| |||||| |||||| ||||| ||||||||||| || |||||||    
T  30678879 tcctcgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtt 30678827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 77 - 141
Target Start/End: Original strand, 31962453 - 31962517
Alignment:
Q  77 ttaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacacca 141  Q
    ||||||||||||| | ||| ||||||||||| || ||| || || |||||||||||||| |||||    
T  31962453 ttaacttagttggtaaggacaatgcataatatatgtaaagtctagggttcgaatcccgaccacca 31962517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 142
Target Start/End: Complemental strand, 33153946 - 33153870
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||| ||||| |||||| |||||| ||||| ||||||||||| || ||||||   |||||| || ||||||||||||    
T  33153946 tccttgtgagcttaactcagttggtagggacaatgcataatatatgtaaggtccgaggttcaaaccccgaacaccac 33153870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 309
Target Start/End: Original strand, 42479466 - 42479502
Alignment:
Q  273 acttgataagaagtttaaaatgcaaattttatcttgg 309  Q
    ||||||||||||| |||||||| ||||||||||||||    
T  42479466 acttgataagaaggttaaaatgaaaattttatcttgg 42479502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 30326661 - 30326733
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaag 342  Q
    |||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||  |||||||||| ||||    
T  30326661 ggcatttgataagaagtttaaaatggaaattttatcttgggatttgtgtattcaacacattgaaacatcaaag 30326733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 242 - 341
Target Start/End: Original strand, 2248671 - 2248770
Alignment:
Q  242 aatgctaacaagtgcccttttcctcaatggcacttgataagaagtttaaaatgcaaattttatctt-ggattttgtgtattcaacctattgaaacattaa 340  Q
    |||||||||||||||||||  ||| || |||||||| ||||||||| ||| || |||||||||||| ||  ||||||||||||||  |||||||||||||    
T  2248671 aatgctaacaagtgcccttgccct-aagggcacttgctaagaagttcaaagtggaaattttatcttcggtgtttgtgtattcaacacattgaaacattaa 2248769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 342938 - 343006
Alignment:
Q  273 acttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||| |||||||||||| ||||||| | ||||| ||| ||||||||||  ||||||||||||||    
T  342938 acttgataaaaagtttaaaatgaaaattttgttttggaatttatgtattcaacacattgaaacattaaa 343006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 109
Target Start/End: Complemental strand, 7979789 - 7979746
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaa 109  Q
    |||||||||| || ||| ||||||||||||||||||||||||||    
T  7979789 tcctcgtgagtttgactcagttggcagggataatgcataataaa 7979746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 24396896 - 24396825
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||| ||||| |||||  |||||||||||| || || ||||||||||   ||||||||||||||    
T  24396896 ggcacttgataaaaagttgaaaatagaaattttatcttagaattcgtgtattcaaaacattgaaacattaaa 24396825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 131
Target Start/End: Complemental strand, 16890514 - 16890449
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatc 131  Q
    |||||||||| ||||||||||||| | ||| ||||||||| | || |||||| |||||||| ||||    
T  16890514 tcctcgtgagcttaacttagttggtatggacaatgcataaaatatgtaaggtctaaggttcaaatc 16890449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 273 - 341
Target Start/End: Complemental strand, 31597643 - 31597575
Alignment:
Q  273 acttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||  ||||||||| ||||||| ||||| | |||||| |||||||  ||| ||||||||||    
T  31597643 acttgataagagttttaaaatggaaattttgtcttgaaatttgtgcattcaacacattaaaacattaaa 31597575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 94 - 142
Target Start/End: Original strand, 35110077 - 35110125
Alignment:
Q  94 gataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||||||||| || |||||||| ||||||||| ||| ||||||||    
T  35110077 gataatgcataatatatgtaaggtttgaggttcgaaccccaaacaccac 35110125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 5e-16; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 32615823 - 32615894
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||||||||||||| |  ||||||||||||||| || |||||||||||  ||||||||||||||    
T  32615823 ggcacttgataagaagtttaaagtagaaattttatcttggaattcgtgtattcaacacattgaaacattaaa 32615894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 29912126 - 29912193
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    |||||||||||||||||||||| |  ||||||||||||  | ||||||||||||||  ||||||||||    
T  29912126 ggcacttgataagaagtttaaagtagaaattttatcttaaaatttgtgtattcaactcattgaaacat 29912193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 38813709 - 38813780
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||| ||| ||||||||| |||||| ||| ||||||||||   ||||||||||||| |||||||||||||||    
T  38813709 ggcatttgttaagaagttcaaaatgaaaaatttatcttgggaattgtgtattcaacatattgaaacattaaa 38813780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 337
Target Start/End: Original strand, 42964773 - 42964839
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    |||||||||||||||||||||| || ||||||||||||||   |||||||||||||  ||||||||||    
T  42964773 ggcacttgataagaagtttaaagtggaaattttatcttgg-gattgtgtattcaacacattgaaacat 42964839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 84 - 140
Target Start/End: Original strand, 13958824 - 13958880
Alignment:
Q  84 agttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacacc 140  Q
    |||||||||  ||||||||||||| || ||||||||  |||||||||||||||||||    
T  13958824 agttggcagatataatgcataatatatgtaaggtttggggttcgaatcccgaacacc 13958880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 13521830 - 13521759
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||| |||||||||||||||| |  ||||||||| ||| | ||||||||||| ||  ||||||||||||||    
T  13521830 ggcacctgataagaagtttaaagtagaaattttattttgaaatttgtgtattctacacattgaaacattaaa 13521759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 13611365 - 13611294
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||| |||||||||||||||| |  ||||||||| ||| | ||||||||||| ||  ||||||||||||||    
T  13611365 ggcacctgataagaagtttaaagtagaaattttattttgaaatttgtgtattctacacattgaaacattaaa 13611294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 341
Target Start/End: Complemental strand, 26738593 - 26738526
Alignment:
Q  274 cttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||| ||||||||||||| |  |||||||||| || | | |||||||||||| |||||||||||||||    
T  26738593 cttgctaagaagtttaaagtagaaattttatcctgaaatatgtgtattcaacatattgaaacattaaa 26738526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 341
Target Start/End: Complemental strand, 41909508 - 41909447
Alignment:
Q  280 aagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||| || ||| ||||||||| | | |||||||||||| |||||||| ||||||    
T  41909508 aagaagtttaaagtgaaaaatttatcttgaaatctgtgtattcaacatattgaaatattaaa 41909447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Complemental strand, 7839160 - 7839108
Alignment:
Q  90 cagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||||||||||||| ||  ||||| |  |||||||||||||||||||||    
T  7839160 cagggataatgcataatatatgcaaggtatggggttcgaatcccgaacaccac 7839108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.000000000008; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 337
Target Start/End: Original strand, 11123453 - 11123517
Alignment:
Q  273 acttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    ||||||||||||||||||| || |||||||||| | || |||||||||||||| |||| ||||||    
T  11123453 acttgataagaagtttaaagtgaaaattttatcatagaatttgtgtattcaacatattaaaacat 11123517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 273 - 341
Target Start/End: Original strand, 37626931 - 37626999
Alignment:
Q  273 acttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||||||||||| | ||  ||| ||||||||||||||||||||||  ||| ||||||||||    
T  37626931 acttgataagaagtttaaaagggaagctttgtcttggattttgtgtattcaacacatttaaacattaaa 37626999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 272 - 341
Target Start/End: Complemental strand, 26009801 - 26009732
Alignment:
Q  272 cacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||||||||| |||||| |  ||| ||||||||||| |||||||||||||  |||||||| ||||||    
T  26009801 cacttgataagaaatttaaagtaaaaactttatcttggaatttgtgtattcaaaatattgaaatattaaa 26009732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 270 - 324
Target Start/End: Complemental strand, 23568116 - 23568062
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaa 324  Q
    ||||||||||||||||||| ||||| ||| ||||||||| | ||||| |||||||    
T  23568116 ggcacttgataagaagttttaaatggaaactttatcttgaaatttgtatattcaa 23568062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 337
Target Start/End: Original strand, 42098913 - 42098975
Alignment:
Q  275 ttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    |||||||||||||||||||| ||||||||| || |  ||||| |||||||  |||||||||||    
T  42098913 ttgataagaagtttaaaatgaaaattttattttaggatttgtatattcaatatattgaaacat 42098975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 20096336 - 20096295
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataata 107  Q
    |||||||||| |||||| |||||| |||||||||||||||||    
T  20096336 tcctcgtgagtttaactcagttggtagggataatgcataata 20096295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 41897619 - 41897578
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataata 107  Q
    |||| ||||||||||||||||||| ||||||| |||||||||    
T  41897619 tccttgtgagattaacttagttggtagggatattgcataata 41897578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 341
Target Start/End: Complemental strand, 844871 - 844800
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||||||||||||||| ||  |||| ||| |||||  |||||||||||||  ||||||||||||||    
T  844871 ggcacttgataagaagtttaaagtggtaattctattttggaagttgtgtattcaacacattgaaacattaaa 844800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 341
Target Start/End: Original strand, 19608763 - 19608834
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    ||||||| |||||||||| |||| | ||| ||||||||||| ||||| ||||||||  ||||||||||||||    
T  19608763 ggcacttaataagaagttcaaaaaggaaactttatcttggaatttgtctattcaacacattgaaacattaaa 19608834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 138
Target Start/End: Original strand, 1512850 - 1512922
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaaca 138  Q
    |||||||||| |||||| |||| | ||||| ||||||||||| || |||||| |||||||||||  |||||||    
T  1512850 tcctcgtgagcttaactcagttagtagggacaatgcataatatatgtaaggtctaaggttcgaactccgaaca 1512922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 3156529 - 3156605
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||||| |||||| |||||| | ||||||||||||| | || |||| |||  |||||||||||||| ||||||    
T  3156529 tcctcgtgagtttaactcagttggtatggataatgcataaaatatgtaagatttggggttcgaatcccgaccaccac 3156605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 142
Target Start/End: Original strand, 10199014 - 10199090
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||||| ||| || |||||| | ||| ||||||||||| ||||||||| |  |||||||||||||| ||||||    
T  10199014 tcctcgtgagcttagctcagttggtatggacaatgcataatatatataaggtgtggggttcgaatcccgaccaccac 10199090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 65 - 140
Target Start/End: Original strand, 11017170 - 11017245
Alignment:
Q  65 atcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacacc 140  Q
    |||| |||||| ||| || |||||| ||||||||||||||||| ||  ||||| | |||||||||||||| |||||    
T  11017170 atccgcgtgagtttagctcagttggtagggataatgcataatatatgcaaggtctgaggttcgaatcccggacacc 11017245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 70 - 107
Target Start/End: Complemental strand, 2642825 - 2642788
Alignment:
Q  70 cgtgagattaacttagttggcagggataatgcataata 107  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  2642825 cgtgagtttaacttagttggtagggataatgcataata 2642788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 66 - 119
Target Start/End: Complemental strand, 20370196 - 20370143
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggttt 119  Q
    |||||||||| ||| || |||||| ||||||||||||||||| ||| |||||||    
T  20370196 tcctcgtgagcttagctcagttggtagggataatgcataatatatacaaggttt 20370143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 337
Target Start/End: Complemental strand, 31732198 - 31732131
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    |||||| |||||||||  ||||||| || |||||||||||  |||||||||||||| |||||||||||    
T  31732198 ggcactagataagaagcctaaaatggaagttttatcttgggatttgtgtattcaacatattgaaacat 31732131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 140
Target Start/End: Original strand, 41113187 - 41113245
Alignment:
Q  82 ttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacacc 140  Q
    |||||||| || |||||| ||||||| |||||||||||  ||||||||| |||||||||    
T  41113187 ttagttggtagagataatacataatatatataaggtttggggttcgaataccgaacacc 41113245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 134
Target Start/End: Original strand, 48376830 - 48376898
Alignment:
Q  66 tcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccg 134  Q
    |||||||||| ||| || |||||| |  |||||||||||||| || ||||||||  |||||||||||||    
T  48376830 tcctcgtgagcttagctcagttggtaaagataatgcataatatatgtaaggtttggggttcgaatcccg 48376898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000001; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 337
Target Start/End: Complemental strand, 11074625 - 11074559
Alignment:
Q  271 gcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacat 337  Q
    ||||||||||||||||||||| |  ||||||| ||||||  ||||||||||||||  ||||||||||    
T  11074625 gcacttgataagaagtttaaagtagaaattttttcttgggatttgtgtattcaacacattgaaacat 11074559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 119
Target Start/End: Complemental strand, 41939175 - 41939121
Alignment:
Q  65 atcctcgtgagattaacttagttggcagggataatgcataataaatataaggttt 119  Q
    ||||||||||| ||| ||||||||| ||||||||||||||||| || ||||||||    
T  41939175 atcctcgtgagcttagcttagttggtagggataatgcataatatatgtaaggttt 41939121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 239 - 336
Target Start/End: Complemental strand, 40142103 - 40142006
Alignment:
Q  239 agaaatgctaacaagtgcccttttcctcaatggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaaca 336  Q
    ||||||||||||||||||||||| ||  ||  ||| ||||||||||||||||| |  ||| ||||||||  | ||||| ||||||||  |||||||||    
T  40142103 agaaatgctaacaagtgccctttgccctaagagcagttgataagaagtttaaagtaaaaaatttatcttaaaatttgtatattcaactcattgaaaca 40142006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 40797370 - 40797435
Alignment:
Q  77 ttaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||||| |||| | ||| ||||||||||| ||| ||||| |||||||||||| |||||||||||    
T  40797370 ttaacttaattggtaaggacaatgcataatatatacaaggtctaaggttcgaattccgaacaccac 40797435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 272 - 324
Target Start/End: Complemental strand, 8741098 - 8741046
Alignment:
Q  272 cacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaa 324  Q
    ||||| |||| |||||||||||  ||||||||||||||| |||||||||||||    
T  8741098 cactttataacaagtttaaaatagaaattttatcttggaatttgtgtattcaa 8741046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 119
Target Start/End: Complemental strand, 34364559 - 34364508
Alignment:
Q  68 ctcgtgagattaacttagttggcagggataatgcataataaatataaggttt 119  Q
    |||||||| ||||||||||||| ||| ||||||||||||| ||| |||||||    
T  34364559 ctcgtgagtttaacttagttggtaggaataatgcataatatatacaaggttt 34364508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 139
Target Start/End: Original strand, 20239337 - 20239411
Alignment:
Q  65 atcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacac 139  Q
    |||| |||||| |||||| | |||  ||||||||||||||||| ||  ||||| |||||||||||||||| ||||    
T  20239337 atccgcgtgagcttaactcaattgatagggataatgcataatatatgcaaggtctaaggttcgaatcccggacac 20239411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 272 - 341
Target Start/End: Original strand, 1944731 - 1944798
Alignment:
Q  272 cacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacattaaa 341  Q
    |||||||||| |||||||||||| ||||||  ||||||| |||||||||||||   ||||||||||||||    
T  1944731 cacttgataa-aagtttaaaatgaaaatttg-tcttggaatttgtgtattcaatacattgaaacattaaa 1944798  T

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Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 26704 - 26769
Alignment:
Q  77 ttaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||||| |||||  ||||||||||||||||| ||||||||||||| |||| |||| || |||||||    
T  26704 ttaactcagttgttagggataatgcataatatatataaggtttaaagttcaaatctcggacaccac 26769  T

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Target: scaffold0074 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 338
Target Start/End: Complemental strand, 29816 - 29748
Alignment:
Q  270 ggcacttgataagaagtttaaaatgcaaattttatcttggattttgtgtattcaacctattgaaacatt 338  Q
    |||||||||||| ||||| ||| |  ||||||||||||||| || |||||||||||  |||||||||||    
T  29816 ggcacttgataaaaagttgaaagtagaaattttatcttggaattcgtgtattcaacacattgaaacatt 29748  T

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Target: scaffold0445 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 142
Target Start/End: Original strand, 4464 - 4541
Alignment:
Q  65 atcctcgtgagattaacttagttggcagggataatgcataataaatataaggtttaaggttcgaatcccgaacaccac 142  Q
    |||| |||||| |||||| |||||  ||| ||||||||||||| || |||||| ||  |||||||||||| |||||||    
T  4464 atccacgtgagcttaactaagttgataggaataatgcataatatatgtaaggtctagagttcgaatcccggacaccac 4541  T

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