View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5746_low_80 (Length: 260)
Name: NF5746_low_80
Description: NF5746
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5746_low_80 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 25771922 - 25771762
Alignment:
| Q |
20 |
cggactaacatcctcaagcttcaattgtctcaataaaatagtaaaaagattcatttccaaaatatgagctgaggacatttcctcatcaaccccccttctc |
119 |
Q |
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| T |
25771922 |
cggactaacatcctcaagctccaattgtctcaataaaatagtaaaaagattcatttccaaaatatgagctgaggacatttcctcttcaaccccccttctc |
25771823 |
T |
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| Q |
120 |
tcctccaccccactaaccacattaatgttttaggagtttctactccaggtgttatttcaat |
180 |
Q |
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| T |
25771822 |
tgtcacaccccactaaccacattaatgttttaggagtttctactccaggtgttatttcaat |
25771762 |
T |
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