View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5747-Insertion-3 (Length: 417)

Name: NF5747-Insertion-3
Description: NF5747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5747-Insertion-3
NF5747-Insertion-3
[»] chr4 (104 HSPs)
chr4 (11-354)||(5441292-5441645)
chr4 (11-352)||(54341032-54341383)
chr4 (11-354)||(27767944-27768297)
chr4 (12-352)||(30967276-30967616)
chr4 (11-354)||(37828367-37828718)
chr4 (11-343)||(51320809-51321151)
chr4 (11-339)||(54853448-54853786)
chr4 (14-319)||(50018142-50018447)
chr4 (16-353)||(49834799-49835126)
chr4 (14-353)||(49501485-49501828)
chr4 (14-353)||(49507550-49507893)
chr4 (110-353)||(23987201-23987444)
chr4 (12-337)||(32321980-32322315)
chr4 (11-263)||(29649733-29649985)
chr4 (17-343)||(5799872-5800198)
chr4 (11-336)||(12913111-12913437)
chr4 (13-353)||(41725015-41725359)
chr4 (64-343)||(37915768-37916057)
chr4 (110-339)||(32683988-32684206)
chr4 (15-312)||(31314749-31315042)
chr4 (147-353)||(28483923-28484127)
chr4 (39-312)||(25331047-25331330)
chr4 (110-333)||(36479228-36479450)
chr4 (28-318)||(32950837-32951137)
chr4 (194-354)||(48261198-48261368)
chr4 (15-312)||(22201907-22202214)
chr4 (15-312)||(41881089-41881398)
chr4 (15-312)||(46635655-46635957)
chr4 (39-319)||(55302759-55303049)
chr4 (11-183)||(20021232-20021404)
chr4 (15-175)||(37915677-37915837)
chr4 (15-263)||(28541590-28541838)
chr4 (15-312)||(39479362-39479671)
chr4 (15-312)||(1044702-1045006)
chr4 (15-312)||(40537167-40537459)
chr4 (39-324)||(34228578-34228872)
chr4 (39-298)||(19740929-19741197)
chr4 (15-312)||(37046457-37046766)
chr4 (15-324)||(30009672-30009991)
chr4 (15-312)||(1112786-1113092)
chr4 (39-324)||(7007289-7007585)
chr4 (15-175)||(24131126-24131286)
chr4 (11-170)||(29855570-29855728)
chr4 (110-324)||(12112932-12113156)
chr4 (200-324)||(56445350-56445474)
chr4 (110-263)||(9163063-9163216)
chr4 (110-310)||(44770862-44771073)
chr4 (11-243)||(23464841-23465075)
chr4 (11-167)||(23987144-23987300)
chr4 (39-263)||(25504705-25504929)
chr4 (64-312)||(3436534-3436792)
chr4 (11-94)||(28483871-28483954)
chr4 (147-312)||(42786708-42786883)
chr4 (244-333)||(8711997-8712086)
chr4 (14-102)||(24736335-24736422)
chr4 (15-289)||(7249795-7250087)
chr4 (110-252)||(28370911-28371053)
chr4 (13-167)||(32684108-32684261)
chr4 (16-96)||(28370859-28370939)
chr4 (116-312)||(39307260-39307466)
chr4 (244-324)||(24736466-24736546)
chr4 (11-167)||(36479351-36479505)
chr4 (13-102)||(467773-467862)
chr4 (135-290)||(25446062-25446227)
chr4 (194-324)||(41320881-41321021)
chr4 (39-166)||(39307374-39307501)
chr4 (238-329)||(11090429-11090520)
chr4 (245-332)||(36727937-36728023)
chr4 (119-263)||(53275835-53275979)
chr4 (11-61)||(56445632-56445682)
chr4 (15-91)||(42786659-42786736)
chr4 (110-182)||(11090336-11090408)
chr4 (39-95)||(36728046-36728102)
chr4 (110-178)||(37915730-37915798)
chr4 (39-94)||(44646748-44646803)
chr4 (15-102)||(49469213-49469300)
chr4 (11-89)||(11090279-11090357)
chr4 (37-87)||(53594111-53594161)
chr4 (11-68)||(34141627-34141684)
chr4 (39-144)||(41320666-41320769)
chr4 (10-95)||(41761977-41762062)
chr4 (15-94)||(28100584-28100664)
chr4 (39-94)||(8584007-8584062)
chr4 (15-94)||(16653257-16653336)
chr4 (39-167)||(25446009-25446136)
chr4 (11-94)||(28847104-28847187)
chr4 (39-94)||(38230799-38230854)
chr4 (15-94)||(53271912-53271991)
chr4 (8-62)||(6334462-6334516)
chr4 (8-62)||(6335412-6335466)
chr4 (46-96)||(44771045-44771095)
chr4 (244-312)||(24130988-24131057)
chr4 (142-178)||(40143822-40143858)
chr4 (135-312)||(41581796-41581982)
chr4 (142-178)||(54509760-54509796)
chr4 (133-175)||(41320788-41320830)
chr4 (247-324)||(27454073-27454150)
chr4 (145-178)||(28100584-28100617)
chr4 (110-167)||(42786713-42786770)
chr4 (64-96)||(9163059-9163091)
chr4 (39-87)||(16018930-16018978)
chr4 (142-178)||(26336123-26336159)
chr4 (134-178)||(41762017-41762061)
chr4 (142-178)||(47685190-47685226)
[»] chr1 (70 HSPs)
chr1 (11-354)||(6312456-6312809)
chr1 (11-343)||(29396364-29396706)
chr1 (11-354)||(25612039-25612392)
chr1 (8-343)||(15835029-15835374)
chr1 (11-353)||(9322466-9322818)
chr1 (11-336)||(29219170-29219493)
chr1 (11-353)||(28387359-28387711)
chr1 (18-339)||(18798380-18798691)
chr1 (41-354)||(51701494-51701815)
chr1 (11-353)||(46327924-46328276)
chr1 (13-308)||(5495117-5495412)
chr1 (14-339)||(48177442-48177777)
chr1 (11-353)||(45272469-45272809)
chr1 (110-343)||(38536075-38536308)
chr1 (110-343)||(38558293-38558526)
chr1 (11-251)||(49230768-49231008)
chr1 (17-334)||(48668770-48669084)
chr1 (11-183)||(8141274-8141446)
chr1 (11-333)||(9577418-9577750)
chr1 (10-312)||(35279553-35279865)
chr1 (15-312)||(21222034-21222340)
chr1 (15-309)||(50192560-50192865)
chr1 (15-312)||(28824380-28824686)
chr1 (10-312)||(49198276-49198586)
chr1 (39-319)||(35679128-35679418)
chr1 (64-312)||(19451815-19452073)
chr1 (15-312)||(45760016-45760324)
chr1 (15-312)||(6304259-6304568)
chr1 (11-309)||(32588963-32589272)
chr1 (15-312)||(33025398-33025696)
chr1 (15-263)||(730035-730283)
chr1 (17-312)||(49417972-49418277)
chr1 (15-175)||(953705-953865)
chr1 (15-312)||(47654358-47654668)
chr1 (15-173)||(22183256-22183414)
chr1 (110-324)||(37014635-37014859)
chr1 (64-324)||(47780645-47780916)
chr1 (15-173)||(19452006-19452164)
chr1 (11-98)||(42290726-42290813)
chr1 (28-261)||(29556007-29556236)
chr1 (17-290)||(48524208-48524490)
chr1 (71-299)||(45535886-45536124)
chr1 (11-96)||(38536280-38536365)
chr1 (11-96)||(38558498-38558583)
chr1 (64-167)||(47784364-47784466)
chr1 (42-157)||(14494122-14494237)
chr1 (110-285)||(47784368-47784542)
chr1 (15-102)||(47780505-47780592)
chr1 (197-312)||(31572204-31572329)
chr1 (39-93)||(42657741-42657795)
chr1 (11-96)||(25831139-25831224)
chr1 (39-94)||(19007581-19007636)
chr1 (39-94)||(51826838-51826893)
chr1 (110-175)||(19452046-19452111)
chr1 (15-94)||(27198274-27198353)
chr1 (39-94)||(48194617-48194672)
chr1 (39-94)||(48203375-48203430)
chr1 (28-102)||(31572390-31572464)
chr1 (206-275)||(955827-955896)
chr1 (141-178)||(10896845-10896882)
chr1 (142-178)||(1928406-1928442)
chr1 (197-261)||(31622527-31622591)
chr1 (142-178)||(36402293-36402329)
chr1 (39-94)||(14555313-14555368)
chr1 (111-173)||(14494149-14494211)
chr1 (15-87)||(19893454-19893526)
chr1 (142-178)||(29208801-29208837)
chr1 (142-178)||(33243312-33243348)
chr1 (142-178)||(33263485-33263521)
chr1 (145-177)||(42657763-42657795)
[»] chr8 (54 HSPs)
chr8 (11-354)||(18305935-18306278)
chr8 (11-354)||(14782099-14782452)
chr8 (11-354)||(44725774-44726127)
chr8 (11-353)||(7466224-7466566)
chr8 (13-343)||(19717856-19718196)
chr8 (11-339)||(18958706-18959044)
chr8 (11-339)||(42305774-42306102)
chr8 (17-353)||(39467433-39467778)
chr8 (11-337)||(16362085-16362411)
chr8 (11-337)||(31623584-31623900)
chr8 (13-337)||(10295360-10295696)
chr8 (64-341)||(32497467-32497744)
chr8 (11-339)||(9288436-9288767)
chr8 (11-302)||(4031294-4031575)
chr8 (11-353)||(26855957-26856308)
chr8 (11-339)||(4402996-4403334)
chr8 (110-343)||(43166665-43166908)
chr8 (15-312)||(41478990-41479287)
chr8 (11-312)||(26374436-26374745)
chr8 (147-339)||(37857144-37857336)
chr8 (17-312)||(42938123-42938428)
chr8 (7-167)||(43166809-43166969)
chr8 (39-312)||(2704825-2705108)
chr8 (15-308)||(23115179-23115481)
chr8 (15-312)||(42735283-42735590)
chr8 (39-312)||(43959574-43959847)
chr8 (15-312)||(5576626-5576934)
chr8 (15-299)||(32711313-32711595)
chr8 (15-312)||(7506905-7507212)
chr8 (12-171)||(32497373-32497532)
chr8 (110-312)||(24501819-24502031)
chr8 (111-309)||(10392246-10392454)
chr8 (15-312)||(42937253-42937551)
chr8 (14-87)||(43308520-43308593)
chr8 (116-336)||(39189798-39190025)
chr8 (14-155)||(39189944-39190085)
chr8 (44-268)||(41069866-41070091)
chr8 (10-102)||(24214817-24214909)
chr8 (15-167)||(24501932-24502084)
chr8 (28-91)||(26373711-26373774)
chr8 (10-94)||(14061544-14061628)
chr8 (11-94)||(37857092-37857175)
chr8 (194-265)||(13478313-13478384)
chr8 (38-94)||(10802773-10802829)
chr8 (110-178)||(32497429-32497497)
chr8 (39-94)||(1606015-1606070)
chr8 (39-94)||(2112818-2112873)
chr8 (8-183)||(9770962-9771135)
chr8 (15-94)||(29260278-29260357)
chr8 (39-94)||(43605366-43605421)
chr8 (142-175)||(4302813-4302846)
chr8 (10-87)||(35142040-35142117)
chr8 (39-87)||(7148073-7148121)
chr8 (142-178)||(37567365-37567401)
[»] chr3 (101 HSPs)
chr3 (11-354)||(36674095-36674448)
chr3 (11-341)||(50762038-50762368)
chr3 (11-337)||(11431414-11431750)
chr3 (11-353)||(44906479-44906831)
chr3 (11-343)||(23753383-23753704)
chr3 (11-354)||(10660423-10660752)
chr3 (11-354)||(31646251-31646602)
chr3 (20-354)||(54628740-54629085)
chr3 (11-343)||(40897031-40897375)
chr3 (11-353)||(52617937-52618283)
chr3 (11-353)||(26107149-26107501)
chr3 (110-341)||(10728629-10728860)
chr3 (13-353)||(48379048-48379397)
chr3 (11-326)||(50903233-50903561)
chr3 (11-353)||(51737693-51738043)
chr3 (116-337)||(37454854-37455075)
chr3 (110-354)||(34483995-34484249)
chr3 (116-343)||(39038033-39038260)
chr3 (11-352)||(32580064-32580415)
chr3 (110-353)||(17946275-17946528)
chr3 (64-343)||(18749553-18749842)
chr3 (11-308)||(20832883-20833187)
chr3 (116-343)||(52810371-52810608)
chr3 (15-183)||(18749462-18749630)
chr3 (64-336)||(44276330-44276598)
chr3 (17-312)||(19253721-19254026)
chr3 (22-333)||(6035039-6035359)
chr3 (15-312)||(20498102-20498408)
chr3 (17-299)||(6975643-6975922)
chr3 (17-324)||(37820472-37820789)
chr3 (15-312)||(996093-996399)
chr3 (15-312)||(10139153-10139460)
chr3 (11-164)||(27240408-27240561)
chr3 (15-312)||(3206212-3206510)
chr3 (28-309)||(35337640-35337930)
chr3 (11-312)||(6589451-6589763)
chr3 (206-353)||(39842460-39842607)
chr3 (39-324)||(44762032-44762327)
chr3 (15-312)||(33807805-33808116)
chr3 (11-183)||(12103520-12103689)
chr3 (127-336)||(15492850-15493062)
chr3 (12-263)||(29029895-29030145)
chr3 (15-308)||(40246736-40247039)
chr3 (11-99)||(39842659-39842747)
chr3 (11-96)||(10728832-10728917)
chr3 (39-312)||(29448865-29449150)
chr3 (110-312)||(3999652-3999864)
chr3 (116-312)||(27899337-27899533)
chr3 (71-324)||(54625540-54625803)
chr3 (255-332)||(45862983-45863060)
chr3 (11-261)||(1440020-1440269)
chr3 (14-167)||(52810311-52810464)
chr3 (147-252)||(539481-539586)
chr3 (17-308)||(25418260-25418561)
chr3 (118-312)||(33996548-33996752)
chr3 (10-252)||(52114417-52114658)
chr3 (11-89)||(17946219-17946296)
chr3 (39-304)||(51699495-51699769)
chr3 (15-261)||(55235079-55235322)
chr3 (11-102)||(15493958-15494049)
chr3 (121-309)||(53929138-53929336)
chr3 (10-102)||(539608-539700)
chr3 (244-312)||(6131240-6131308)
chr3 (15-91)||(12734078-12734154)
chr3 (110-312)||(5825047-5825261)
chr3 (15-89)||(38772269-38772343)
chr3 (199-287)||(52080003-52080091)
chr3 (36-94)||(10225671-10225729)
chr3 (194-274)||(23535866-23535946)
chr3 (39-94)||(10105016-10105071)
chr3 (39-94)||(10216163-10216218)
chr3 (39-94)||(10225792-10225847)
chr3 (39-167)||(27899302-27899430)
chr3 (36-94)||(10104895-10104953)
chr3 (36-94)||(10216042-10216100)
chr3 (15-284)||(22057655-22057933)
chr3 (39-96)||(2024123-2024180)
chr3 (119-175)||(6131325-6131381)
chr3 (39-94)||(28146261-28146316)
chr3 (39-94)||(45215403-45215458)
chr3 (64-167)||(34484150-34484253)
chr3 (110-175)||(27240439-27240504)
chr3 (142-178)||(27593198-27593234)
chr3 (142-178)||(36786017-36786053)
chr3 (38-94)||(38629802-38629858)
chr3 (11-71)||(50901199-50901259)
chr3 (15-94)||(19552150-19552229)
chr3 (39-94)||(26555841-26555896)
chr3 (39-94)||(30588866-30588921)
chr3 (269-312)||(33807687-33807730)
chr3 (39-94)||(36055009-36055064)
chr3 (39-94)||(46749278-46749333)
chr3 (39-94)||(50900449-50900504)
chr3 (110-175)||(2024152-2024217)
chr3 (145-178)||(10216163-10216196)
chr3 (145-178)||(10225671-10225704)
chr3 (256-297)||(12103733-12103774)
chr3 (37-89)||(13662573-13662625)
chr3 (37-89)||(24574926-24574978)
chr3 (34-94)||(34292506-34292566)
chr3 (142-178)||(39338299-39338335)
[»] chr7 (89 HSPs)
chr7 (11-354)||(28342230-28342583)
chr7 (11-352)||(23101181-23101532)
chr7 (11-354)||(29614728-29615081)
chr7 (12-345)||(39783983-39784326)
chr7 (11-353)||(46405406-46405748)
chr7 (11-343)||(37327810-37328142)
chr7 (7-353)||(9882202-9882557)
chr7 (39-352)||(40460683-40460996)
chr7 (10-353)||(39027979-39028322)
chr7 (11-353)||(18838272-18838624)
chr7 (11-343)||(7993025-7993367)
chr7 (13-353)||(44121875-44122216)
chr7 (11-353)||(3022809-3023161)
chr7 (13-353)||(33382522-33382872)
chr7 (110-354)||(509638-509882)
chr7 (19-353)||(28034770-28035114)
chr7 (11-309)||(33892269-33892568)
chr7 (11-324)||(17001037-17001340)
chr7 (13-353)||(41827199-41827539)
chr7 (11-333)||(3797052-3797374)
chr7 (20-318)||(19251431-19251729)
chr7 (22-353)||(12740267-12740607)
chr7 (11-284)||(32883664-32883948)
chr7 (116-339)||(29585503-29585725)
chr7 (17-343)||(44256741-44257077)
chr7 (121-353)||(8675326-8675567)
chr7 (11-333)||(10068349-10068682)
chr7 (15-312)||(43581096-43581403)
chr7 (13-333)||(12963587-12963911)
chr7 (11-175)||(48117746-48117910)
chr7 (15-312)||(30440690-30440997)
chr7 (15-312)||(44343402-44343709)
chr7 (15-324)||(47914160-47914479)
chr7 (15-312)||(973077-973385)
chr7 (15-312)||(12893302-12893609)
chr7 (39-312)||(18914741-18915024)
chr7 (15-312)||(20275269-20275576)
chr7 (15-324)||(47879062-47879381)
chr7 (15-312)||(40996655-40996963)
chr7 (110-315)||(47066685-47066881)
chr7 (15-299)||(727406-727691)
chr7 (39-312)||(7719266-7719550)
chr7 (64-312)||(34695216-34695474)
chr7 (39-353)||(43187321-43187632)
chr7 (119-312)||(9179871-9180064)
chr7 (11-167)||(509581-509737)
chr7 (244-353)||(37972832-37972941)
chr7 (11-99)||(21067765-21067853)
chr7 (39-266)||(31638793-31639020)
chr7 (15-312)||(34008909-34009214)
chr7 (15-173)||(34695125-34695283)
chr7 (206-325)||(19810877-19810996)
chr7 (15-324)||(32142911-32143233)
chr7 (141-312)||(7718368-7718549)
chr7 (11-96)||(29893006-29893091)
chr7 (10-95)||(37973007-37973092)
chr7 (119-309)||(44623295-44623485)
chr7 (11-155)||(10676551-10676695)
chr7 (111-250)||(10676498-10676637)
chr7 (110-183)||(29893063-29893136)
chr7 (14-96)||(47066630-47066713)
chr7 (15-175)||(8078289-8078450)
chr7 (15-102)||(39219561-39219648)
chr7 (7-102)||(43679355-43679451)
chr7 (28-312)||(7113363-7113653)
chr7 (110-312)||(39219383-39219595)
chr7 (11-89)||(29585440-29585518)
chr7 (33-94)||(21066803-21066864)
chr7 (15-94)||(3634216-3634295)
chr7 (119-186)||(1470374-1470441)
chr7 (111-263)||(25805675-25805827)
chr7 (110-175)||(34695178-34695243)
chr7 (199-289)||(43679492-43679592)
chr7 (39-94)||(34115475-34115530)
chr7 (295-341)||(32883944-32883990)
chr7 (135-183)||(10616955-10617003)
chr7 (142-178)||(40097140-40097176)
chr7 (197-252)||(447852-447907)
chr7 (39-94)||(27418644-27418699)
chr7 (306-353)||(29893173-29893220)
chr7 (15-81)||(9179770-9179836)
chr7 (39-89)||(31494266-31494316)
chr7 (214-252)||(37972943-37972981)
chr7 (39-94)||(9599067-9599123)
chr7 (39-94)||(9826638-9826694)
chr7 (39-87)||(35090115-35090163)
chr7 (142-178)||(39301247-39301283)
chr7 (34-94)||(46037352-46037412)
chr7 (10-90)||(48399725-48399805)
[»] chr6 (29 HSPs)
chr6 (11-354)||(31895584-31895937)
chr6 (11-354)||(34773297-34773639)
chr6 (11-339)||(14262412-14262750)
chr6 (110-353)||(30385034-30385275)
chr6 (110-343)||(34759025-34759269)
chr6 (197-347)||(31067567-31067717)
chr6 (214-354)||(4200401-4200541)
chr6 (116-353)||(7497069-7497315)
chr6 (15-312)||(2300744-2301051)
chr6 (15-312)||(6197484-6197791)
chr6 (22-265)||(7051744-7051987)
chr6 (15-308)||(1391516-1391819)
chr6 (39-304)||(28002581-28002856)
chr6 (15-309)||(29076489-29076795)
chr6 (15-309)||(29111462-29111769)
chr6 (11-167)||(7497006-7497162)
chr6 (39-94)||(31609694-31609749)
chr6 (111-255)||(3848200-3848342)
chr6 (11-96)||(30385247-30385334)
chr6 (15-96)||(34759241-34759324)
chr6 (39-94)||(5957153-5957208)
chr6 (39-94)||(7100191-7100246)
chr6 (39-94)||(8794384-8794439)
chr6 (119-175)||(656962-657017)
chr6 (142-178)||(10644016-10644052)
chr6 (142-178)||(30877898-30877934)
chr6 (39-94)||(708942-708997)
chr6 (39-90)||(11007688-11007739)
chr6 (280-324)||(2238678-2238722)
[»] chr5 (46 HSPs)
chr5 (11-354)||(14000069-14000422)
chr5 (14-347)||(4240433-4240766)
chr5 (11-353)||(5948998-5949339)
chr5 (11-343)||(40013687-40014016)
chr5 (11-353)||(1152068-1152420)
chr5 (11-329)||(4550246-4550574)
chr5 (8-342)||(37013800-37014124)
chr5 (12-353)||(13925821-13926172)
chr5 (11-324)||(22746186-22746501)
chr5 (77-341)||(1461125-1461389)
chr5 (122-353)||(7947538-7947779)
chr5 (149-343)||(39852372-39852576)
chr5 (15-312)||(21146960-21147267)
chr5 (15-312)||(33656047-33656356)
chr5 (40-312)||(139191-139473)
chr5 (64-312)||(5272925-5273183)
chr5 (28-312)||(32157900-32158199)
chr5 (15-262)||(6460685-6460932)
chr5 (15-312)||(27458956-27459262)
chr5 (67-312)||(9220723-9220968)
chr5 (110-312)||(7016745-7016957)
chr5 (15-252)||(9689554-9689787)
chr5 (15-99)||(7948546-7948630)
chr5 (117-252)||(14465303-14465438)
chr5 (15-167)||(7016858-7017010)
chr5 (147-299)||(849172-849334)
chr5 (15-173)||(5273116-5273275)
chr5 (36-94)||(26806578-26806636)
chr5 (15-91)||(43319139-43319216)
chr5 (39-94)||(26795635-26795690)
chr5 (36-94)||(26795514-26795572)
chr5 (39-91)||(1511589-1511641)
chr5 (39-94)||(26806699-26806754)
chr5 (15-82)||(27786213-27786280)
chr5 (15-136)||(16894052-16894172)
chr5 (39-94)||(28594444-28594500)
chr5 (67-167)||(1461257-1461357)
chr5 (39-94)||(9689338-9689393)
chr5 (39-94)||(17518455-17518510)
chr5 (39-94)||(40410617-40410672)
chr5 (219-261)||(1511409-1511451)
chr5 (39-89)||(7857052-7857102)
chr5 (110-175)||(14465422-14465486)
chr5 (145-178)||(26806578-26806611)
chr5 (111-175)||(16894055-16894119)
chr5 (142-178)||(17518474-17518510)
[»] chr2 (53 HSPs)
chr2 (16-339)||(28740275-28740598)
chr2 (11-354)||(26788674-26789026)
chr2 (11-353)||(28844445-28844797)
chr2 (11-343)||(3463561-3463894)
chr2 (11-352)||(13833401-13833742)
chr2 (11-353)||(33135513-33135864)
chr2 (11-292)||(7026493-7026775)
chr2 (11-353)||(215206-215545)
chr2 (11-353)||(10657296-10657648)
chr2 (14-353)||(6224535-6224865)
chr2 (11-333)||(3574737-3575049)
chr2 (119-345)||(18177265-18177501)
chr2 (10-336)||(10125285-10125613)
chr2 (116-341)||(25288154-25288389)
chr2 (10-312)||(16269580-16269892)
chr2 (15-312)||(24776249-24776556)
chr2 (15-312)||(31170633-31170940)
chr2 (15-324)||(12407274-12407593)
chr2 (15-312)||(22551772-22552079)
chr2 (110-353)||(378926-379169)
chr2 (15-312)||(14198586-14198892)
chr2 (64-312)||(20605179-20605437)
chr2 (10-312)||(35316951-35317263)
chr2 (39-312)||(32125168-32125454)
chr2 (15-263)||(44765669-44765917)
chr2 (15-312)||(305474-305783)
chr2 (15-175)||(20605046-20605206)
chr2 (39-312)||(43847564-43847847)
chr2 (15-299)||(1789336-1789630)
chr2 (69-312)||(5093056-5093309)
chr2 (39-278)||(26601253-26601492)
chr2 (244-353)||(43078696-43078805)
chr2 (11-153)||(378869-379011)
chr2 (12-96)||(43078566-43078650)
chr2 (275-353)||(7027051-7027129)
chr2 (15-102)||(9120062-9120149)
chr2 (14-77)||(43825084-43825147)
chr2 (116-312)||(9120121-9120327)
chr2 (194-250)||(21370631-21370687)
chr2 (15-177)||(19144918-19145082)
chr2 (39-94)||(2288488-2288541)
chr2 (15-94)||(3858188-3858267)
chr2 (39-94)||(18176471-18176526)
chr2 (37-94)||(45546956-45547013)
chr2 (142-178)||(11534881-11534917)
chr2 (142-178)||(34028935-34028971)
chr2 (211-251)||(43078653-43078693)
chr2 (39-94)||(29940972-29941027)
chr2 (39-94)||(37981649-37981704)
chr2 (39-89)||(2372996-2373046)
chr2 (142-178)||(20157759-20157795)
chr2 (142-178)||(24193595-24193631)
chr2 (39-95)||(39698598-39698654)
[»] scaffold0543 (1 HSPs)
scaffold0543 (14-343)||(10452-10791)
[»] scaffold1504 (1 HSPs)
scaffold1504 (14-353)||(755-1101)
[»] scaffold0110 (1 HSPs)
scaffold0110 (28-353)||(39583-39918)
[»] scaffold0922 (1 HSPs)
scaffold0922 (11-252)||(4089-4330)
[»] scaffold0306 (2 HSPs)
scaffold0306 (110-354)||(13870-14114)
scaffold0306 (11-167)||(13813-13969)
[»] scaffold0152 (3 HSPs)
scaffold0152 (110-354)||(21213-21457)
scaffold0152 (238-354)||(28467-28584)
scaffold0152 (11-167)||(21358-21514)
[»] scaffold0037 (1 HSPs)
scaffold0037 (15-312)||(100104-100411)
[»] scaffold0400 (1 HSPs)
scaffold0400 (42-312)||(15040-15320)
[»] scaffold0365 (1 HSPs)
scaffold0365 (42-312)||(15683-15963)
[»] scaffold0042 (2 HSPs)
scaffold0042 (110-353)||(58042-58295)
scaffold0042 (11-99)||(58264-58352)
[»] scaffold0347 (2 HSPs)
scaffold0347 (230-343)||(14878-14991)
scaffold0347 (11-99)||(14784-14872)
[»] scaffold0054 (3 HSPs)
scaffold0054 (147-353)||(36876-37089)
scaffold0054 (19-96)||(37056-37133)
scaffold0054 (110-167)||(37027-37084)
[»] scaffold0839 (1 HSPs)
scaffold0839 (244-343)||(3668-3767)
[»] scaffold0004 (1 HSPs)
scaffold0004 (119-312)||(102090-102295)
[»] scaffold0010 (7 HSPs)
scaffold0010 (70-180)||(233685-233795)
scaffold0010 (70-180)||(234533-234643)
scaffold0010 (70-180)||(222517-222627)
scaffold0010 (11-44)||(233642-233675)
scaffold0010 (11-44)||(234490-234523)
scaffold0010 (64-96)||(233721-233753)
scaffold0010 (64-96)||(234569-234601)
[»] scaffold0151 (2 HSPs)
scaffold0151 (147-312)||(38612-38786)
scaffold0151 (15-91)||(38758-38834)
[»] scaffold0113 (2 HSPs)
scaffold0113 (110-308)||(38906-39114)
scaffold0113 (15-89)||(39093-39167)
[»] scaffold0276 (1 HSPs)
scaffold0276 (64-312)||(546-804)
[»] scaffold0492 (2 HSPs)
scaffold0492 (8-72)||(12030-12094)
scaffold0492 (14-72)||(11998-12056)
[»] scaffold0651 (1 HSPs)
scaffold0651 (15-153)||(8655-8793)
[»] scaffold0287 (1 HSPs)
scaffold0287 (15-94)||(11790-11869)
[»] scaffold0016 (1 HSPs)
scaffold0016 (15-94)||(81784-81863)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-175)||(199770-199835)


Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 104)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 5441292 - 5441645
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  5441292 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 5441391  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  5441392 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 5441491  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5441492 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 5441591  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  5441592 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 5441645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 54341032 - 54341383
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  54341032 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 54341131  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  54341132 tcttatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 54341231  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54341232 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 54341331  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattct 352  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||| ||||    
T  54341332 atgagatttcttgagattgtttttattttaaaagttactatttttttcttct 54341383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 27767944 - 27768297
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||       |    
T  27767944 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaag 27768043  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  27768044 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 27768143  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27768144 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 27768243  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  27768244 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 27768297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 12 - 352
Target Start/End: Complemental strand, 30967616 - 30967276
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    ||||||||||||||| |||| ||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||       ||    
T  30967616 ggatgtattggattatgattttatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagt 30967517  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    ||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||| |||| |    
T  30967516 cttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaa 30967417  T
Q  212 tcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 311  Q
    ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||    
T  30967416 tcattcaaatttcaaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaaaataagatttct 30967317  T
Q  312 tgagattggttttattttaaaagttactatctttttattct 352  Q
    |||||||| |||| |||||||||||||||||| ||| ||||    
T  30967316 tgagattgttttttttttaaaagttactatctctttcttct 30967276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 37828718 - 37828367
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||| |||||  |  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||            
T  37828718 gggatgtattggattagaattctgag--attttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaaa 37828621  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||||     
T  37828620 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaa 37828521  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37828520 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaaaaagaaaaagtctttcatgaaaag 37828421  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||    
T  37828420 atgagatttcttgagattgtttttattttaaaaattactatctttttcttctca 37828367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 51320809 - 51321151
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||| ||       |    
T  51320809 gggatgtattggattaggattctacggaattttaaaagactttttaattatgaaaaaattttgtggtattcaatcaagactttttgcaacttaaaaaaag 51320908  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  51320909 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 51321008  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||          ||||||||||||||||||||||||| ||||||||||||    
T  51321009 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtaattttatagtgtaattttaacaagaaaaagtttttcatgaaaag 51321108  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  51321109 atgagatttcttgagattgtttttcttttaaaagttactatct 51321151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 54853786 - 54853448
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||       |    
T  54853786 gggatgtattggattaggattttatggaattttaaaagactttttaattacgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 54853687  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||       ||||||||||| ||||     
T  54853686 tcttgtggtattcaatcaagactctttttcattttaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 54853587  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    || ||||||||||| ||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  54853586 attattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaag 54853487  T
Q  301 atgagatttcttgagattggttttattttaaaagttact 339  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  54853486 atgagatttcttgagattgtttttcttttaaaagttact 54853448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 14 - 319
Target Start/End: Original strand, 50018142 - 50018447
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||||||| ||||||||| ||||||||| | |||||||||||  |||||||||||||||||||||||||||||||| ||||||       ||||    
T  50018142 atgtattggattagaattctatgggattttaaaatattttttaattataaaaaagtcttgtggtattcaatcaagactttttacaatttaaaaaaagtct 50018241  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||       ||||||||||| ||||||||    
T  50018242 tatggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattccatcaagacttttcttcatttaaaaaaagtcttgtggtattcaagatc 50018341  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 313  Q
    |||||||||| |||||||||||| |||||||| |||||   ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  50018342 attcaaattttgaaggattgtttaataaattgaattttaatggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaagatgagatttattg 50018441  T
Q  314 agattg 319  Q
    ||||||    
T  50018442 agattg 50018447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 16 - 353
Target Start/End: Complemental strand, 49835126 - 49834799
Alignment:
Q  16 gtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctta 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||       |||||     
T  49835126 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 49835027  T
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||| |||| |||||    
T  49835026 tggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 49834927  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    ||||||||||||||||||||| |||||||          |||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  49834926 tcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaagaagtctttcattaaaagatgagatttcttgag 49834837  T
Q  316 attggttttattttaaaagttactatctttttattctc 353  Q
    |||| |||| | |||||||||||||||| ||| |||||    
T  49834836 attgtttttctattaaaagttactatctatttcttctc 49834799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 14 - 353
Target Start/End: Complemental strand, 49501828 - 49501485
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnnnn-gt 111  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||| |||||        ||    
T  49501828 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49501729  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    |||   ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| | |||| |    
T  49501728 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49501629  T
Q  212 tcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 309  Q
    |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49501628 tcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49501529  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||| |||| |||||||||||| ||||| ||| |||||    
T  49501528 cttgagattgtttttcttttaaaagttattatctctttcttctc 49501485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 14 - 353
Target Start/End: Complemental strand, 49507893 - 49507550
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnnnn-gt 111  Q
    ||||||| |||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||| ||||||||||| |||||        ||    
T  49507893 atgtatttgattaggattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattgaatctaagactttttgtaatttaaaaaaaagt 49507794  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    |||   ||||||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||       ||||||||| | |||| |    
T  49507793 cttgcagtattcaatcaagactctttgtcattttaaataaatcttgaggtattcaatcaagacttttcatcacttaaaaaatgtcttgtggcattcaaaa 49507694  T
Q  212 tcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc--atgaaaagatgagattt 309  Q
    |||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||    
T  49507693 tcattcaaatttcgaatgattgtttaataaattggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatataaaaagatgagattt 49507594  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||| |||| |||||||||||| ||||| ||| |||||    
T  49507593 cttgagattgtttttcttttaaaagttattatctctttcttctc 49507550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 110 - 353
Target Start/End: Original strand, 23987201 - 23987444
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||||||||| ||||    
T  23987201 gtcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     |||||||||||||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23987301 aatcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 23987400  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||| |||| |||||||||||||||||| ||| |||||    
T  23987401 cttgagattgtttttcttttaaaagttactatctctttcttctc 23987444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 12 - 337
Target Start/End: Original strand, 32321980 - 32322315
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    ||||||||||||||||||||||||   | |||||||||||||||||||||| |||||| ||||||||||||||||||| |||||| || ||       ||    
T  32321980 ggatgtattggattaggattctatcagaatttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaaaaagt 32322079  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    | | || |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||| |||| |    
T  32322080 catgtgatatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaatagtcttgtggtattcaaaa 32322179  T
Q  212 tcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    ||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  32322180 tcattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcataaaaaga 32322279  T
Q  302 tgagatttcttgagattggttttattttaaaagtta 337  Q
    |||||||||||||||||| |||| |||||| |||||    
T  32322280 tgagatttcttgagattgtttttcttttaatagtta 32322315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 11 - 263
Target Start/End: Complemental strand, 29649985 - 29649733
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||       |    
T  29649985 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaatttaaaaaaag 29649886  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  29649885 tcttgtggtattagattaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 29649786  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    ||||||||||||||||| |||||||| |||||||||||||||  |||||||||    
T  29649785 atcattcaaatttcgaaagattgtttaataaattggattttgatggattttgt 29649733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 5799872 - 5800198
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||| |||||||||| ||||| |||||||||||||||||||||||| |||||| |||||||||| ||| |||||||||||||| ||       || || |    
T  5799872 tattagattaggattttatgggattttaaaagactttttaattatg-aaaagttttgtggtattaaattaagactttttgcaacttaaaaaaagttttgt 5799970  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtactcaagatcat 215  Q
    |||||||||| ||||||||||||||||||||||||   |||| |||||  ||||| ||||||||||| ||        ||||||||||| |||| |||||    
T  5799971 ggtattcaatcaagactctttgtcattttaaaaaaaatttgatgtatttcatcaaaacttttcatcacttaaaaaaaagtcttgtggtattcaaaatcat 5800070  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    ||||||||| ||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||| |||||| |||||    
T  5800071 tcaaatttcaaaggattgtttaataaattggattttgtgagattttgtagagtaattttaacaagaaaaagtctttaatgaaaagataagattttttgag 5800170  T
Q  316 attggttttattttaaaagttactatct 343  Q
    |||| |||| |||||||||||| |||||    
T  5800171 attgtttttcttttaaaagttattatct 5800198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 11 - 336
Target Start/End: Original strand, 12913111 - 12913437
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn- 109  Q
    ||||| |||| |||||||| |||| |  ||||||||||| ||||||||| || |||||||||||||||||||||||||||| |||  |||||            
T  12913111 gggatatattcgattaggaatctaagagattttaaaagattttttaattttgaaaaagtcttgtggtattcaatcaagactctttataatttaaaaaaaa 12913210  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||       ||||  ||||| ||||    
T  12913211 gtcttgtggtatttaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagctttttcatcatttaaaaaaagtctcatggtattcaa 12913310  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||||||| ||||||||| | |||||||||    
T  12913311 aatcattcaaattttgaaggattgtttaataaattggattttgtgggattttctagtgaaattttaacaagaaaaagtatttcatgaagacatgagattt 12913410  T
Q  310 cttgagattggttttattttaaaagtt 336  Q
    ||||  |||  |||| |||||||||||    
T  12913411 cttggaattatttttcttttaaaagtt 12913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 41725015 - 41725359
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||| |||||||||||||  |||||||||||| |||||||||||  |||||||||||| ||||||||||||| ||||||||| ||        |     
T  41725015 gatgtattgaattaggattctataaaattttaaaagattttttaattataaaaaagtcttgtgatattcaatcaagattttttgcaacttaaaaaaaata 41725114  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||||||||||| || |||||||||||||||||||||||||||| |||| |||||||||||||||||||  |       |||||||| || |||| ||    
T  41725115 ttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgatgtatgcaatcaagacttttcatcacctaaaaaaagtcttgtgatattcaaaat 41725214  T
Q  213 cattcaaatttcgaaggattgtttgataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    ||||||||||| ||||||||||||   |||||||||||          ||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  41725215 cattcaaattttgaaggattgttt---aaattggattttgatgaattttgtgggattttatagtgtaattttaacaagaaaaaatctttcatgaaaagat 41725311  T
Q  303 gagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||   ||||||||||||||||||||||||||||||| |||||    
T  41725312 gagatttcttg---ttggttttattttaaaagttactatctttttcttctc 41725359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 64 - 343
Target Start/End: Original strand, 37915768 - 37916057
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||||||||  | ||       ||||| ||||||||||| |||||||| | |||||||||||||||||||||||||    
T  37915768 aaaagtcttgtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagactctctatcattttaaaaaagtcttgaggtat 37915867  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||||||||||||||| ||       ||||||||||| |||| |||||||||||||||||||||||||| ||||||          ||||||||||    
T  37915868 tcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 37915967  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||||| |||||||||||||||||| ||||||||||||| |||||| ||||||||| |||| ||||||||||||||||||    
T  37915968 gggattttgtagtgtacttttaacaagaaaaagtcattcatgaaaagataagatttattgagattgtttttcttttaaaagttactatct 37916057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 110 - 339
Target Start/End: Complemental strand, 32684206 - 32683988
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| ||||    
T  32684206 gtcttgtggtattcaattaagattctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcatttaaaaaa-gtcttgtggtattcaa 32684108  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     |||||||||||||||||||||||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||    
T  32684107 aatcattcaaatttcgaaggattgtttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 32684018  T
Q  310 cttgagattggttttattttaaaagttact 339  Q
     ||||||||| |||| ||||||||||||||    
T  32684017 attgagattgtttttcttttaaaagttact 32683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 31315042 - 31314749
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || ||| |||||| ||||||||||||||||||||||||| ||||||       |||||    
T  31315042 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 31314943  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||| ||| |||| |||||||||||| |||||||||||| |||||||||    |||| || |||| ||       |||| |||||| |||| ||||    
T  31314942 gtgttatttaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaa----gactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31314847  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||||||||||||||||| ||||||  |||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  31314846 ttcaaatttcgaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 31314749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 147 - 353
Target Start/End: Original strand, 28483923 - 28484127
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgg 246  Q
    ||||||||||||||||||||||||||||||||||||| ||       |||| |||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  28483923 aaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 28484022  T
Q  247 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatctttt 346  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||||  |||| |||||||| ||||||||| ||    
T  28484023 attttgtaggattttgtagtgtaa-tttaacaagaaaaagtctttcatgaaaagacgagatttcttaagattatttttcttttaaaa-ttactatctctt 28484120  T
Q  347 tattctc 353  Q
    | |||||    
T  28484121 tcttctc 28484127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 39 - 312
Target Start/End: Original strand, 25331047 - 25331330
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| ||||||    
T  25331047 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttg 25331146  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| ||| || |||| |||||||||||||| ||||||||||| |    
T  25331147 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttcaaaggattgtttaa 25331246  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  25331247 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 25331330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 110 - 333
Target Start/End: Complemental strand, 36479450 - 36479228
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||       |||| |||||| ||||    
T  36479450 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaa 36479351  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     || ||||||||||||||||||| ||| |||||||||||||||  ||||||| ||||| ||||||| ||| ||||||||||| ||||||| |||||||||    
T  36479350 aattattcaaatttcgaaggattatttaataaattggattttgatggatttt-tagtgaaattttagcaaaaaaaagtcttttatgaaaacatgagattt 36479252  T
Q  310 cttgagattggttttattttaaaa 333  Q
    |||||||||  |||| ||||||||    
T  36479251 cttgagattatttttcttttaaaa 36479228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 28 - 318
Target Start/End: Complemental strand, 32951137 - 32950837
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaatt 127  Q
    ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || ||||||||     
T  32951137 gattctaagggattttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatc 32951038  T
Q  128 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaa 227  Q
    |||| | |||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||    
T  32951037 aagattatttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaa 32950938  T
Q  228 ggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 317  Q
    ||||||||| ||||||          || ||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| |||||||||||| ||||    
T  32950937 ggattgtttaataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatgagatttcttaagat 32950838  T
Q  318 t 318  Q
    |    
T  32950837 t 32950837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 194 - 354
Target Start/End: Original strand, 48261198 - 48261368
Alignment:
Q  194 gtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaa 283  Q
    ||||||||||| |||| ||||||||||||| |||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||    
T  48261198 gtcttgtggtattcaaaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaa 48261297  T
Q  284 aagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    || ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  48261298 aaatctttcatgaaaatatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 48261368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 22201907 - 22202214
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||| ||||||||||||||| ||| ||||||       |||||    
T  22201907 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtctt 22202006  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  22202007 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 22202106  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    || ||||||| || |||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |    
T  22202107 ttaaaatttcaaaagattgtttaataaataaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatta 22202206  T
Q  305 gatttctt 312  Q
    ||||||||    
T  22202207 gatttctt 22202214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 41881398 - 41881089
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | |||| || || |||||||||||||||||  || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||    
T  41881398 tgtattggatcatgattttaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaagtct 41881299  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagat 212  Q
    | || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        || | |||||| |||| ||    
T  41881298 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtttagtggtattcaaaat 41881199  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  41881198 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 41881099  T
Q  303 gagatttctt 312  Q
    ||||||||||    
T  41881098 gagatttctt 41881089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 46635957 - 46635655
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaa-gtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || ||| |||| |||||||||||||||||||||||| ||| ||||||        |||    
T  46635957 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaatct 46635858  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | |  |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       || | || ||| |||| |||    
T  46635857 tgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtttagtagtattcaaaatc 46635758  T
Q  214 attcaaatttcgaaggattgtttgataaat----tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
    ||||||||||||||||||||||| ||||||    | |||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| |||||||||    
T  46635757 attcaaatttcgaaggattgtttaataaataagattgattttgtgggattttttagtgaaattttagcatgaaaaagtctttcataaaaacatgagattt 46635658  T
Q  310 ctt 312  Q
    |||    
T  46635657 ctt 46635655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 39 - 319
Target Start/End: Original strand, 55302759 - 55303049
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    |||||| |||||||||| || ||| |||||| || |||||||||||||||||| ||| ||||||       ||||| || | |||||| |||| ||||||    
T  55302759 attttagaagacttttttataatgaaaaagtgttatggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgtttttcaatcaagattctttg 55302858  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||||||||||||| || ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| |    
T  55302859 tcattttaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 55302958  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 319  Q
    |||||          ||||| |||||||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||    
T  55302959 taaatcagattttgatggatattgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattg 55303049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 20021232 - 20021404
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||  ||| || || |||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||       |    
T  20021232 gggatgtattggattataattttaagggattttaaaagactttttaattatgaaaaagtcttgtggtatttaatcaagactctttgcaatttaaaaaaag 20021331  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
    | || ||||||||||| |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  20021332 ttttgtggtattcaatcaagattctttgtcattttaaaaaaatcttgaagtattcaatcaagacttttcatca 20021404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 37915677 - 37915837
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||       |||||    
T  37915677 tgtattggattatgattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtctt 37915776  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
     ||||||||||| |||||| ||||||| || |||||||||||| |||||||||||||||||    
T  37915777 gtggtattcaatcaagactttttgtcacttaaaaaaagtcttgtggtattcaatcaagact 37915837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 28541590 - 28541838
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||||| |||| |||||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  28541590 tgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 28541689  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||| | ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  28541690 gtgttattcaatcaagattctttgtcatttaaaaaaagtctcgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 28541789  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    ||||||||||||| |||||||| ||||||  |||||||  |||||||||    
T  28541790 ttcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 28541838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 39479671 - 39479362
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||| || | |||||||||||||||||| || ||  |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  39479671 tgtattggatcatgattttaagaaattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 39479572  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt--nnnnnnngtcttgtggtactcaagat 212  Q
     || |||||||| |||| || ||||||||| |||||||||||| ||||||||||||||||| || |||| ||         | ||||||||| |||| ||    
T  39479571 gtgttattcaatcaagattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaaagacttgtggtattcaaaat 39479472  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||| ||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||  ||    
T  39479471 cattcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaggaaaaagtctttcatgaaagcat 39479372  T
Q  303 gagatttctt 312  Q
    ||||||||||    
T  39479371 gagatttctt 39479362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 1044702 - 1045006
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  1044702 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt-aaaaaagtctt 1044800  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| || |||||||||  ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| | ||    
T  1044801 gtgttattcaatcaagattccttgtcattt--aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaacca 1044898  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||| |||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| || |    
T  1044899 ttcaactttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacataa 1044998  T
Q  305 gatttctt 312  Q
    ||||||||    
T  1044999 gatttctt 1045006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 40537459 - 40537167
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||| || || ||||||||||||||||  || ||  ||||||||||||||||||||| |||||| |||  |||||       |||||    
T  40537459 tgtattggatcatgattgtaagggattttaaaagacttttgtatcataaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaagtctt 40537360  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| ||||||||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||           ||||||| |||| ||||    
T  40537359 gtgttattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaa-----tgtggtattcaaaatca 40537265  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    || |||||||||| |||||||| ||||||  |||||||  ||||||||| ||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  40537264 tttaaatttcgaatgattgtttaataaatctgattttgatggattttgtggtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 40537167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 39 - 324
Target Start/End: Complemental strand, 34228872 - 34228578
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||  || |||||||| |||| ||||||    
T  34228872 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctg-tgttattcaatcaagattctttg 34228774  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| ||||||||| || ||||||||||||| | | || |||| ||       |||| |||||| |||| |||||| |||||||||| |||||||| |    
T  34228773 tcatttaaaaaaagtcatgtggtattcaatcaaaattcttaatcacttaaaaaaagtctagtggtattcaaaatcattgaaatttcgaatgattgtttaa 34228674  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    |||||          |||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||||||||||| |||||| ||||    
T  34228673 taaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttcttaagattgttttt 34228578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 39 - 298
Target Start/End: Complemental strand, 19741197 - 19740929
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    |||||||||||||||||| | ||| |||| ||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| ||||||    
T  19741197 attttaaaagacttttta-tcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttg 19741099  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    ||||||  |||||||| || |||||||| ||||||||||| |||| ||       ||||||||||| | || |||||||||||||||||||||||||| |    
T  19741098 tcatttataaaaagtcatgtggtattcagtcaagacttttaatcacttaaaaaaagtcttgtggtattaaaaatcattcaaatttcgaaggattgtttaa 19740999  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    |||||          |||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||    
T  19740998 taaattagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcatgaaa 19740929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 37046766 - 37046457
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| ||||||||||||||  |||| || ||  |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  37046766 tgtattggatcatgattctaaggaattttaaaagatatttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 37046667  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatc 213  Q
     || |||||||| |||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||        |||| ||| || | || |||    
T  37046666 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtgatatttaaaatc 37046567  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtg-taattttaacaagaaaaagtctttcatgaaaagat 302  Q
    ||||||||||||||||||||||| ||||||          |||||||||||| ||||| |||||  ||||||| || |||||||||||||||||||| ||    
T  37046566 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaaattttagcatgaaaaagtctttcatgaaaatat 37046467  T
Q  303 gagatttctt 312  Q
    ||||||||||    
T  37046466 gagatttctt 37046457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 324
Target Start/End: Complemental strand, 30009991 - 30009672
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||||| |||| |||||| ||||||||| | |||||||||||||||| ||| ||||||       |||||    
T  30009991 tgtattggatcatgattctaagggattttaaaagacatttttattatgaaaaagtcttattgtattcaatcaagactctttccaatttaaaaaaagtctt 30009892  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||| ||| || | ||||| |||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  30009891 gtgttatttaatcaaaattctttatcatttaaaaaaagtcctgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 30009792  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    || ||||||  || |||||||| ||||||          |||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||    
T  30009791 tttaaattttaaatgattgtttaataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaacatga 30009692  T
Q  305 gatttcttgagattggtttt 324  Q
    |||||||| |||||| ||||    
T  30009691 gatttcttaagattgttttt 30009672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 1112786 - 1113092
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| |  |||||||||||||||||  || ||| |||||||||||| ||||||||||||||| ||| | ||||       || |    
T  1112786 tgtattggatcatgattctaag--attttaaaagactttttttatcatgaaaaagtcttgtgttattcaatcaagactctttccgatttaaaaaaagtat 1112883  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | |  |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |||    
T  1112884 tgtattattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatc 1112983  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||| || |||||||| ||||||          |||||||||||||||||  ||||  |||||||||| |||||||||||||||||||| |||    
T  1112984 attcaaatttcaaatgattgtttaataaatcagattttgatggattttgtgggatttcctagtaaaattttaacatgaaaaagtctttcatgaaaacatg 1113083  T
Q  304 agatttctt 312  Q
    |||||||||    
T  1113084 agatttctt 1113092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 39 - 324
Target Start/End: Original strand, 7007289 - 7007585
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtcttatggtattcaattaagactcttt 137  Q
    ||||||| ||||||||| || ||| |||||| ||||||||||||||||||||| ||| ||||||        ||||| || |||||||| |||| ||| |    
T  7007289 attttaatagacttttttataatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattctct 7007388  T
Q  138 gtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttg 237  Q
    ||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||||||||||||||||||||||     
T  7007389 gtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttta 7007488  T
Q  238 ataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    ||||||          || ||||||||||||||| ||||| ||||||| || |||||  | ||||||||||| |||||||||||| |||||| ||||    
T  7007489 ataaatcagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaatttttttcatgaaaacatgagatttcttaagattgttttt 7007585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 24131286 - 24131126
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  24131286 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 24131187  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  24131186 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 24131126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 11 - 170
Target Start/End: Original strand, 29855570 - 29855728
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| |||||||| |||||||||||||||||       |    
T  29855570 gggatttattggattaggattctatggaattttaaaagatttttaaattatgaaaaagtcttgtgatattcaattaagactttttgcaatttaaaaaaag 29855669  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatca 170  Q
    | || | ||||| ||| |||||| ||||||||||||||||| | ||||||||||||||||    
T  29855670 ttttgt-gtatttaatcaagactgtttgtcattttaaaaaaattttgaggtattcaatca 29855728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 110 - 324
Target Start/End: Original strand, 12112932 - 12113156
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||||  ||||| ||||    
T  12112932 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaagtctaatggtattcaa 12113031  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||||    
T  12113032 aatcattcaaatttcgaaggattgtttaataaatcagattttaatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 12113131  T
Q  300 gatgagatttcttgagattggtttt 324  Q
     ||||||||||||| ||||| ||||    
T  12113132 catgagatttcttgggattgttttt 12113156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 200 - 324
Target Start/End: Complemental strand, 56445474 - 56445350
Alignment:
Q  200 tggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    ||||| |||| ||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||| || |||| |||||||||||||||||| || |    
T  56445474 tggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttctagtgaaactttagcaagaaaaagtctttcataaaga 56445375  T
Q  300 gatgagatttcttgagattggtttt 324  Q
     ||||||||||||||||||| ||||    
T  56445374 catgagatttcttgagattgttttt 56445350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 263
Target Start/End: Original strand, 9163063 - 9163216
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||  |       |||||||| || ||||    
T  9163063 gtcttgtggtattcaatcaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagatttttcatcacataaaaaaagtcttgtgatattcaa 9163162  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
     |||||||||||||||||||||||||| |||||||  ||||||  |||||||||    
T  9163163 aatcattcaaatttcgaaggattgtttaataaattaaattttgatggattttgt 9163216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 110 - 310
Target Start/End: Complemental strand, 44771073 - 44770862
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggt-attcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
    ||||| || |||||||| |||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||        |||  ||||| |||    
T  44771073 gtcttgtgatattcaatcaagactctttgtcattttaaaaaaatcttgaggtaattcaatcaagatttttcatcacttaaaaaaaatctcatggtattca 44770974  T
Q  209 agatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | ||||||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| |||||||| |||||||||||||||||||      
T  44770973 aaatcattcaaattttgaaggattgtttaataaattggattttggtggattttgtgggattttctagtgaaattttaagaagaaaaagtctttcatgacg 44770874  T
Q  299 agatgagatttc 310  Q
    | ||||||||||    
T  44770873 acatgagatttc 44770862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 243
Target Start/End: Original strand, 23464841 - 23465075
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaaga--ctttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnn 108  Q
    |||||||||||||||| ||||||| ||||||||||||||   ||||| || ||| |||||||||||||||||||||||||||| ||| |||| |          
T  23464841 gggatgtattggattatgattctaaggaattttaaaagatttttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatataaaaaa 23464940  T
Q  109 ngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
     ||||| |  |||||||| |||| || ||||||||| |||||||| |||   ||||||||||||||| || |||| ||       |||| |||||| |||    
T  23464941 agtcttgtattattcaatcaagattccttgtcatttaaaaaaagttttgtaatattcaatcaagactcttaatcacttaaaataagtctagtggtattca 23465040  T
Q  209 agatcattcaaatttcgaaggattgtttgataaat 243  Q
    | | |||||||||||||||||||||||| ||||||    
T  23465041 aaaccattcaaatttcgaaggattgtttaataaat 23465075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 23987144 - 23987300
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||  ||||       |    
T  23987144 gggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaatactctttgtcattttaaaaaag 23987243  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||||  |||||||||| || ||| ||  ||| || |||||||||||| |||||||||    
T  23987244 tcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtggtattcaa 23987300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 39 - 263
Target Start/End: Complemental strand, 25504929 - 25504705
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||| ||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| ||||      
T  25504929 attttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttga 25504830  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||| ||||| | ||||||||||||||| || |||| ||       |||  ||| || |||| |||||||||||||||||||||||||| |    
T  25504829 tcatttaaaaaaattcttgtgatattcaatcaagactcttaatcacttaaaaaaagtccagtgatattcaaaatcattcaaatttcgaaggattgtttaa 25504730  T
Q  239 taaattggattttgtgggattttgt 263  Q
    |||||  |||||||  |||||||||    
T  25504729 taaatcagattttgatggattttgt 25504705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 64 - 312
Target Start/End: Original strand, 3436534 - 3436792
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||| ||| ||| ||||||        | || || |||||||| |||| | |||||| ||| |||||| ||||| | |||    
T  3436534 aaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaaatattgtgttattcaatcaagattttttgtcgtttaaaaaaaatcttgtgatat 3436633  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||||||| || |||||||        |||  ||||| |||| |||||||||||||||||||||||||| ||||||          || |||||||    
T  3436634 tcaatcaagactcttaatcatttaaaaaaaatctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatgaattttgt 3436733  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||||||||| |||||||||| |||||||| ||||||||||| || |||||||||    
T  3436734 gggattttgtagtgaaattttaacatgaaaaagtttttcatgaaaacataagatttctt 3436792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 28483871 - 28483954
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| ||||||||||||||  |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  28483871 gggatgtattgaattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgaggtattcaatcaagactttt 28483954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 147 - 312
Target Start/End: Original strand, 42786708 - 42786883
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat--- 243  Q
    ||||||||||| ||||||||||||||||| || |||||||       |||| |||||| |||| |||||||||||||||||||||||||| ||||||       
T  42786708 aaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcat 42786807  T
Q  244 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
           |||||||||||| ||||| ||||| ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  42786808 attttgatggattttgtggaattttctagtgaaattttatcataaaaaagtctttcatgaaaacatgagatttctt 42786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 8711997 - 8712086
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaa 333  Q
    |||||||||||||||||| ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||||||| |||| ||||||||    
T  8711997 tggattttgtgggattttatagtgaaattttagcaagaaaaagtctttcatcaaaacatgagatttcttgagattgtttttcttttaaaa 8712086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 24736335 - 24736422
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| |||| |||||||| ||||||||||||||| ||||||||||    
T  24736335 atgtattggattaggattctaaggaattttaaaagattttttaattat-gaaatgtcttgtgatattcaatcaagactctttgcaattt 24736422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 15 - 289
Target Start/End: Complemental strand, 7250087 - 7249795
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt-nnnnnnngtct 113  Q
    |||||||||| | ||||||| |||||||||||||||||||| || ||| |||| ||||||||||||||||||||||| ||| ||||||        ||||    
T  7250087 tgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtct 7249988  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt-------nnnnnnngtcttgtggtact 206  Q
    | || |||||||| |||| |||| ||||||| |||||  ||||| ||||||| ||||||||| || || | ||              |||| |||||| |    
T  7249987 tgtgttattcaatcaagattcttagtcatttaaaaaatatcttgtggtattcgatcaagactcttgataacttaaaaaaaaaaaaaagtctagtggtatt 7249888  T
Q  207 caagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtct 289  Q
    ||| |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||    
T  7249887 caaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtct 7249795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 252
Target Start/End: Original strand, 28370911 - 28371053
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| || |||||||||| |||||||||||||||||| ||||||||||| |||||| |||| ||       ||||  ||||| ||||    
T  28370911 gtcttgtggtattcaatcaaaactctttgtcgttttaaaaaagtcttgagatattcaatcaaaactttttatcacttaaataaagtctcatggtattcaa 28371010  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttg 252  Q
     |||||||||||||  ||||||||||| |||||||| ||||||    
T  28371011 aatcattcaaattttaaaggattgtttaataaattgaattttg 28371053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 32684261 - 32684108
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||| ||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||| |||| | ||||  ||||       ||     
T  32684261 gatgtattgaattaggattctatagaattttaaaggactttttaattatgaaaaagtcttgtggtattcaattaagattctttgtcattttaaaaaagta 32684162  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||  |||||||||| |||||| ||  ||| ||||||||||||||| |||||||||    
T  32684161 ttgaggtattcaatcaagacttttcatca-tttaaaaaagtcttgtggtattcaa 32684108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 28370859 - 28370939
Alignment:
Q  16 gtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||    
T  28370859 gtattggattaggattctaatgaattttaaaggactttttaattatgaaaaagtcttgtggtattcaatcaaaactctttg 28370939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 116 - 312
Target Start/End: Complemental strand, 39307466 - 39307260
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||| | |||| |||||||||||||||||| ||||||||||||||| | ||||||||||       ||||||||||| |||  |||||    
T  39307466 tggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttcatcatttaaaaaaagtcttgtggtattcataatcat 39307367  T
Q  216 tcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    ||||||||| || |||| ||| || |||          || ||||||||||||||| ||||| |||||||||| |||||||| | | || |||| |||||    
T  39307366 tcaaatttctaaagattatttaatgaattgagttttgatgaattttgtgggattttctagtgaaattttaacatgaaaaagtttctgataaaaacatgag 39307267  T
Q  306 atttctt 312  Q
    |||||||    
T  39307266 atttctt 39307260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 244 - 324
Target Start/End: Original strand, 24736466 - 24736546
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    ||||||||||| |||||| ||||| |||||||||||||| |||||||||||||||| ||||||||||||| ||||| ||||    
T  24736466 tggattttgtgagattttctagtgaaattttaacaagaagaagtctttcatgaaaacatgagatttcttgtgattgttttt 24736546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 36479505 - 36479351
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||| |||||| | |||||||||||| |||||||||||| |||||||||||||||||||||||| ||| ||||  ||||       |    
T  36479505 gggatgtattggattagaattctaag-aattttaaaaga-tttttaattatgaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaag 36479408  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||||  ||||||||||||||| | ||  ||| || |||||||||| | |||||||||    
T  36479407 tcttgaggtattcaattaagatttttcatcacttaaaaaaagtctcgtggtattcaa 36479351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 102
Target Start/End: Original strand, 467773 - 467862
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||||||| ||||||  |||||||||||||| |||||||||||| |||||| |||| ||||||||| |||| | ||||||||||    
T  467773 gatgtattggattatgattcttaggaattttaaaagattttttaattatgaaaaagttttgtcgtattcaattaagattatttgcaattt 467862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 135 - 290
Target Start/End: Original strand, 25446062 - 25446227
Alignment:
Q  135 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgt 234  Q
    |||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||||||||||||| ||||||    
T  25446062 tttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgt 25446161  T
Q  235 ttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 290  Q
    || ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||    
T  25446162 ttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctt 25446227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 194 - 324
Target Start/End: Original strand, 41320881 - 41321021
Alignment:
Q  194 gtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaa 283  Q
    |||| |||||| |||| |||||||||||||||||||||||||| ||||||          ||||||||||||||| || ||||| |||||||  | ||||    
T  41320881 gtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggatgttctagtgaaattttagtatgaaa 41320980  T
Q  284 aagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    ||||||||||| |||| |||||||||||| |||||| ||||    
T  41320981 aagtctttcataaaaacatgagatttcttaagattgatttt 41321021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 166
Target Start/End: Complemental strand, 39307501 - 39307374
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    |||||||||||| |||  |||||  |||||| ||||||||||||||||||| ||||||| ||||       ||||| ||||||||||| |||| ||||      
T  39307501 attttaaaagacatttatattatcaaaaagttttgtggtattcaatcaagattttttgccattttaaaaaagtcttgtggtattcaatcaagattcttca 39307402  T
Q  139 tcattttaaaaaagtcttgaggtattca 166  Q
    |||||| |||||||||||| ||||||||    
T  39307401 tcatttaaaaaaagtcttgtggtattca 39307374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 238 - 329
Target Start/End: Original strand, 11090429 - 11090520
Alignment:
Q  238 ataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttatttt 329  Q
    |||||||||||||||||||||||| ||||| ||||||| ||  ||||||||||| || |||| ||||||||||||  ||||| |||| ||||    
T  11090429 ataaattggattttgtgggattttttagtgaaattttagcattaaaaagtctttaataaaaacatgagatttcttaggattgtttttctttt 11090520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 332
Target Start/End: Complemental strand, 36728023 - 36727937
Alignment:
Q  245 ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaa 332  Q
    ||||||||| ||||||| ||||| ||||||||||||||||| ||||||||| | | ||||||||| ||||||||| |||| |||||||    
T  36728023 ggattttgtaggattttttagtgaaattttaacaagaaaaaatctttcatg-agacatgagattttttgagattgttttttttttaaa 36727937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 119 - 263
Target Start/End: Original strand, 53275835 - 53275979
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattca 218  Q
    |||||||| |||| | |||||||||| ||||||||||||  |||||||||||||| |||| |||| ||       |||| ||| || | || ||||||||    
T  53275835 tattcaataaagattatttgtcatttaaaaaaagtcttgtagtattcaatcaagatttttaatcacttaaaaaaagtctagtgatatttaaaatcattca 53275934  T
Q  219 aatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    |||||||||||||||| | ||||||  |||||||  |||||||||    
T  53275935 aatttcgaaggattgtgtaataaatcagattttgatggattttgt 53275979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 61
Target Start/End: Complemental strand, 56445682 - 56445632
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattat 61  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  56445682 gggatgtattggattaagattctaaggaattttaaaagactttttaattat 56445632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 42786659 - 42786736
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagact 91  Q
    |||||||||| | ||||||| || |||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  42786659 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagact 42786736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 182
Target Start/End: Original strand, 11090336 - 11090408
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatc 182  Q
    ||||| ||||||||||| |||| |||||| || || |||||||| ||| ||||||||||||||||||||||||    
T  11090336 gtcttgtggtattcaatcaagaatctttgccacttaaaaaaagttttgtggtattcaatcaagacttttcatc 11090408  T

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Target: chr4; HSP #73
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 36728102 - 36728046
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagacttttt 95  Q
    ||||||||||| |||||||||||| ||||||||||| |||||||||||||| |||||    
T  36728102 attttaaaagattttttaattatgaaaaagtcttgtagtattcaatcaagatttttt 36728046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 37915730 - 37915798
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||| ||||||||||| |||||| ||||| | || |||||||||||| ||||||||||||||||||||    
T  37915730 gtcttgtggtattcaatcaagactttttgtaacttaaaaaaagtcttgtggtattcaatcaagactttt 37915798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 44646748 - 44646803
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||    
T  44646748 attttaaaagactttttaatgataaaaaaatcttgtggtattcaatcaagactttt 44646803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 49469213 - 49469300
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||| | ||||| | ||||||||||||||||||||  || || | ||||||||||||||| |||||||||| ||| ||||||    
T  49469213 tgtattggatcatgattccaaggaattttaaaagactttttttttgtgaagaagtcttgtggtatttaatcaagactctttccaattt 49469300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 11090279 - 11090357
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||| |||| |||||| | || ||||||||| | ||||||||||||  || ||||||||||||||||||||||    
T  11090279 gggatgtatttgattgggattccaagggattttaaaatattttttaattatgagaatgtcttgtggtattcaatcaaga 11090357  T

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Target: chr4; HSP #78
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 37 - 87
Target Start/End: Original strand, 53594111 - 53594161
Alignment:
Q  37 gaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    ||||||||||||||||||| ||||| |||||||||||||| ||||||||||    
T  53594111 gaattttaaaagacttttttattatagaaaagtcttgtggcattcaatcaa 53594161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 34141684 - 34141627
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaag 68  Q
    |||||||||||||||| |||| ||||  |||||||||||||||||||||||| |||||    
T  34141684 gggatgtattggattaagattttatgagattttaaaagactttttaattatgaaaaag 34141627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 144
Target Start/End: Original strand, 41320666 - 41320769
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||| ||||| |||||| |||||||  ||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| ||||||    
T  41320666 attttaaaagatttttttattatgaaaaagtc--gtggtattcaatcaagactgtttccaatttaaaaaatgtcttgtgttattcaatcaagattctttg 41320763  T
Q  139 tcattt 144  Q
    ||||||    
T  41320764 tcattt 41320769  T

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Target: chr4; HSP #81
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 10 - 95
Target Start/End: Original strand, 41761977 - 41762062
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagacttttt 95  Q
    |||| |||||||||||  |||| ||  | ||||||||||||||| | |||||  ||||||||||||||||| ||||||||||||||    
T  41761977 aggggtgtattggattgagattttaaaggattttaaaagactttgtgattataaaaaagtcttgtggtattgaatcaagacttttt 41762062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 28100664 - 28100584
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| |||||  | ||  ||||||||||||||||  |||||  |||||||||||||||||||||||||||||||    
T  28100664 tgtattggattgggatttcaaggggttttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 8584062 - 8584007
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| ||| |  |||||||||||||||||||||||||| ||||    
T  8584062 attttaaaagacttttttattttataaaagtcttgtggtattcaatcaagattttt 8584007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 16653257 - 16653336
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||| ||| |||||  ||||||||||||||||| ||||||  |   |||||||||||||||||||||||||| ||||    
T  16653257 tgtattgaattgggatttcatggaattttaaaagacattttaaaaaaaaaaaagtcttgtggtattcaatcaagaatttt 16653336  T

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Target: chr4; HSP #85
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 25446009 - 25446136
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||  ||||||||||||| ||||||  ||||        |||| ||||||||||| |||||||||      
T  25446009 attttaaaagacttttttatcatgaaaaagtcttgtattattcaatcaaga-tttttgtcatttaaaaaaattcttgtggtattcaatcaagactcttaa 25446107  T
Q  139 tcattttaaaaaagtcttgaggtattcaa 167  Q
    ||| || |||||||||| | |||||||||    
T  25446108 tcacttaaaaaaagtctagtggtattcaa 25446136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 28847187 - 28847104
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||  |||| ||  | ||||||||||||||||| || ||  |||||||| ||||||||||||||| ||||||    
T  28847187 gggatgtattggattgagattttaaaggattttaaaagacttttttataataaaaaagtctagtggtattcaatcaaaactttt 28847104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 38230799 - 38230854
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |  ||| |||||||| ||||||||||||||||||||||    
T  38230799 attttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 38230854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 53271912 - 53271991
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||| ||| |||||  |||| ||||||||||||||||| |  ||  |||||||||||| ||||||||||||||||||    
T  53271912 tgtattgaattgggatttcatgggattttaaaagacttttttaaaataaaaaagtcttgtgatattcaatcaagactttt 53271991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 6334516 - 6334462
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatg 62  Q
    |||||||||| |||||||||||||||| |  ||||||||||| ||||||||||||    
T  6334516 agagggatgtgttggattaggattctaagagattttaaaagaatttttaattatg 6334462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 6335466 - 6335412
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatg 62  Q
    |||||||||| |||||||||||||||| |  ||||||||||| ||||||||||||    
T  6335466 agagggatgtgttggattaggattctaagagattttaaaagaatttttaattatg 6335412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 46 - 96
Target Start/End: Complemental strand, 44771095 - 44771045
Alignment:
Q  46 aagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||| |||||| |||||||||||| ||||||||||||||| ||||    
T  44771095 aagactttttgattatgaaaaagtcttgtgatattcaatcaagactctttg 44771045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 24131057 - 24130988
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaag-tctttcatgaaaagatgagatttctt 312  Q
    |||||||||||||||||| ||||| |||||||  | ||||||  ||||||||||||| ||||||||||||    
T  24131057 tggattttgtgggattttctagtgaaattttaggatgaaaaaaatctttcatgaaaacatgagatttctt 24130988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 40143822 - 40143858
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40143822 ttttaaaaaagtctttaggtattcaatcaagactttt 40143858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 312
Target Start/End: Complemental strand, 41581982 - 41581796
Alignment:
Q  135 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgt 234  Q
    ||||||||||||||||||||||| |||||||| | |||| ||||| | | ||       |||| |||||| | |   |||||||||||| |||  |||||    
T  41581982 tttgtcattttaaaaaagtcttgtggtattcagttaagaattttcttaacttaaaaaaagtctcgtggtatttagagtcattcaaattttgaataattgt 41581883  T
Q  235 ttgataaattggatt--------ttgtgggattttgtagtgtaattttaacaag-aaaaagtctttcatgaaaagatgagatttctt 312  Q
    || ||||||||||||        |||||||||||| ||||| |||||||||| | ||||| | ||||||| ||| ||||||||||||    
T  41581882 ttaataaattggattgatatattttgtgggattttctagtgaaattttaacatgaaaaaaatatttcatgtaaacatgagatttctt 41581796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 54509760 - 54509796
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  54509760 ttttaaaaaagtctttaggtattcaatcaagactttt 54509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 175
Target Start/End: Original strand, 41320788 - 41320830
Alignment:
Q  133 tctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| |||||| |||||||||||| |||||||||||||||||    
T  41320788 tctttatcatttaaaaaaagtcttgtggtattcaatcaagact 41320830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 324
Target Start/End: Complemental strand, 27454150 - 27454073
Alignment:
Q  247 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    ||||||||| ||||| ||||| ||||||  || |||||||||||||||||||| || | |||| || |||||| ||||    
T  27454150 attttgtggaattttctagtgaaattttggcatgaaaaagtctttcatgaaaacataatatttgttaagattgttttt 27454073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 28100617 - 28100584
Alignment:
Q  145 taaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||| ||||||||||||||||||||    
T  28100617 taaaaaagtcttgtggtattcaatcaagactttt 28100584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 167
Target Start/End: Original strand, 42786713 - 42786770
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||||| ||||||||||| |||||||||  |||||| |||||||||| | |||||||||    
T  42786713 gtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 42786770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 9163059 - 9163091
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||||||||||| ||||    
T  9163059 aaaagtcttgtggtattcaatcaagactctttg 9163091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 16018930 - 16018978
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    |||||||||||||||||||||||  |||||| ||| |||| ||||||||    
T  16018930 attttaaaagactttttaattataaaaaagttttgaggtaatcaatcaa 16018978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 26336123 - 26336159
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  26336123 ttttaaaaatgtctttaggtattcaatcaagactttt 26336159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 178
Target Start/End: Original strand, 41762017 - 41762061
Alignment:
Q  134 ctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||| ||| ||||||||||||| |||||| |||||||||||||    
T  41762017 ctttgtgattataaaaaagtcttgtggtattgaatcaagactttt 41762061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 47685190 - 47685226
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||| |||| |||||||||||||||||||||    
T  47685190 ttttaaaaaaatctttaggtattcaatcaagactttt 47685226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 6312456 - 6312809
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  6312456 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 6312555  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  6312556 ttttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 6312655  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6312656 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 6312755  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  6312756 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 6312809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 29396706 - 29396364
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||            
T  29396706 gggatgtattggattaggattctatggtattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaa 29396607  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  29396606 tcttttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 29396507  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29396506 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 29396407  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  29396406 atgagatttcttgagattgtttttgttttaaaagttactatct 29396364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 25612039 - 25612392
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||       |    
T  25612039 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaag 25612138  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||||     
T  25612139 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaa 25612238  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||| ||||||||||| ||||||          ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25612239 atcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagaaaaagtctttcatgaaaag 25612338  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  25612339 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 25612392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 8 - 343
Target Start/End: Complemental strand, 15835374 - 15835029
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 107  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||         
T  15835374 agagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaa 15835275  T
Q  108 nngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactc 207  Q
      ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||| ||    
T  15835274 aagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattc 15835175  T
Q  208 aagatcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 297  Q
    || |||||||||||| | ||||||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||    
T  15835174 aaaatcattcaaattgcaaaggattgtttaataaattggattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 15835075  T
Q  298 aagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||    
T  15835074 aagatgagatttcttgagattgtttttgttttaaaagttactatct 15835029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 9322818 - 9322466
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||            
T  9322818 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaa 9322719  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
      || ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||       ||| ||||||| ||||     
T  9322718 atttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcgatcaagacttttcatcatttaaaaaaagtcctgtggtattcaaa 9322619  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| |||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9322618 atcattcaaatttagaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 9322519  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||||| |||||    
T  9322518 atgagatttcttgagattgtttttattttaaaatttactatctttttcttctc 9322466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 336
Target Start/End: Original strand, 29219170 - 29219493
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  29219170 gggatgtattggattaggattatatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 29219269  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| ||||||||  |||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||| ||||     
T  29219270 tcttgtggtattcaatcaagactct--gtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 29219367  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    ||||||||||||  |||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29219368 atcattcaaattaagaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttc 29219467  T
Q  311 ttgagattggttttattttaaaagtt 336  Q
    ||||||||| |||| |||||||||||    
T  29219468 ttgagattgtttttcttttaaaagtt 29219493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 28387711 - 28387359
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||       |    
T  28387711 gggatttattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaag 28387612  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||     
T  28387611 tcttttggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaa 28387512  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
     ||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||| |||||||||||| |||||||||||||| |||||    
T  28387511 ttcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtttaattttaacaaaaaaaagtctttcataaaaag 28387412  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||| ||||| ||| |||||    
T  28387411 atgagatttcttgagattgtttttgttttaaaagttattatctctttcttctc 28387359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 18 - 339
Target Start/End: Original strand, 18798380 - 18798691
Alignment:
Q  18 attggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatg 117  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||       ||||| ||    
T  18798380 attggattaggattctatgagattttaaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtg 18798479  T
Q  118 gtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattc 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||| |||||||    
T  18798480 gtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattc 18798579  T
Q  218 aaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 317  Q
    ||||||||||||||||||| |||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18798580 aaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctagagat 18798669  T
Q  318 tggttttattttaaaagttact 339  Q
    || |||| ||||||||||||||    
T  18798670 tgtttttgttttaaaagttact 18798691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 41 - 354
Target Start/End: Original strand, 51701494 - 51701815
Alignment:
Q  41 tttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtc 140  Q
    ||||||||| |||||||||||  |||||| ||||||||||||||||||||||||||||||||       ||||| ||||||||||| |||||||||||||    
T  51701494 tttaaaaga-tttttaattata-aaaagttttgtggtattcaatcaagactttttgcaatttaaaaatagtcttgtggtattcaatcaagactctttgtc 51701591  T
Q  141 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgata 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||| |||||||||||||||||||||||||| |||    
T  51701592 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaata 51701691  T
Q  241 aat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttatttta 330  Q
    |||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  51701692 aattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattttttgagattgtttttatttta 51701791  T
Q  331 aaagttactatctttttattctca 354  Q
    ||||||||||||||||| ||||||    
T  51701792 aaagttactatctttttcttctca 51701815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 46327924 - 46328276
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||| ||       |    
T  46327924 gggatgcattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtgttattcaatcaaaactttttgcaacttaaaaaaag 46328023  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||| ||||     
T  46328024 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtctcgtggtattcaaa 46328123  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| || |||          ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  46328124 atcattcaaatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaag 46328223  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    || |||||||| || |||| |||| |||||||||||||||||| ||| |||||    
T  46328224 ataagatttctcgaaattgtttttcttttaaaagttactatctctttcttctc 46328276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 13 - 308
Target Start/End: Complemental strand, 5495412 - 5495117
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||| ||       |||    
T  5495412 gatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaggaagtc 5495313  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||| |||| ||    
T  5495312 ttgtggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaaat 5495213  T
Q  213 cattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    |||| ||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  5495212 catttaaatttcaaaggattatttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtcctttatgaaaagatgagatt 5495117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 14 - 339
Target Start/End: Complemental strand, 48177777 - 48177442
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    ||||||||||||| |||||||||| |||||||||   |||||||||||| |||||||||||||||||||||||||||||||||||| ||        |||    
T  48177777 atgtattggattaagattctatgggattttaaaatgttttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatct 48177678  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       ||||||||||| |||| |||    
T  48177677 tgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtcttgtggtattcaaaatc 48177578  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    |||||||||||||| |||||||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48177577 attcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 48177478  T
Q  304 agatttcttgagattggttttattttaaaagttact 339  Q
    |||||||||||||||| |||| ||||||||| ||||    
T  48177477 agatttcttgagattgtttttcttttaaaagatact 48177442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 45272469 - 45272809
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||| | |||||||||||||| |||||||||||||| ||            
T  45272469 gggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaaatattgtggtattcaataaagactttttgcaacttaaaaaaaa 45272568  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| | ||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||        ||| |||||| ||||     
T  45272569 tcttgttgtattcaatcaaaactctttgtcattttaaaaa-gtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatctcgtggtattcaaa 45272667  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    || ||| |||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||||||||     
T  45272668 attatttaaatttcgaaggat-gtttaataaattggattttgtgagattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttt 45272766  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||| |||| |||||||||||| ||||| ||| |||||    
T  45272767 ttgagattgtttttcttttaaaagttattatctgtttcttctc 45272809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 110 - 343
Target Start/End: Complemental strand, 38536308 - 38536075
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||| ||||    
T  38536308 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaa 38536209  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     || ||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38536208 aattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 38536109  T
Q  310 cttgagattggttttattttaaaagttactatct 343  Q
    |||||||||| |||| ||||||||||||| ||||    
T  38536108 cttgagattgtttttcttttaaaagttacaatct 38536075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 110 - 343
Target Start/End: Complemental strand, 38558526 - 38558293
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||       ||||||||||| ||||    
T  38558526 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcattacttaacaaaagtcttgtggtattcaa 38558427  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     || ||||||||||| ||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38558426 aattattcaaatttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 38558327  T
Q  310 cttgagattggttttattttaaaagttactatct 343  Q
    |||||||||| |||| ||||||||||||| ||||    
T  38558326 cttgagattgtttttcttttaaaagttacaatct 38558293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 11 - 251
Target Start/End: Original strand, 49230768 - 49231008
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||       |    
T  49230768 gggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaaattaaaaaaag 49230867  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  49230868 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 49230967  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggatttt 251  Q
    |||||||||||||||||||||| ||| ||||||||||||||    
T  49230968 atcattcaaatttcgaaggattatttaataaattggatttt 49231008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 17 - 334
Target Start/End: Complemental strand, 48669084 - 48668770
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    ||||||||||||||  ||| | ||||||||||| |||||||||||| ||| || ||| |||||| |||||| |  ||||| |||||       || || |    
T  48669084 tattggattaggatattataggattttaaaagattttttaattatgaaaaggttttgaggtatttaatcaaaaaattttgtaatttaaaaaacgttttgt 48668985  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||||||||||||||||||||||||| ||||||||||||||||    ||||||||| ||       |||  |||||| |||| || |||    
T  48668984 gatattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcat---ttttcatcacttaaaaaaagtcacgtggtattcaaaattatt 48668888  T
Q  217 caaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgaga 316  Q
    ||||||||||| |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  48668887 caaatttcgaaagattgtttaataaattggattttgtgggattctgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttgttggga 48668788  T
Q  317 ttggttttattttaaaag 334  Q
    ||| |||| |||||||||    
T  48668787 ttgtttttcttttaaaag 48668770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 183
Target Start/End: Complemental strand, 8141446 - 8141274
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  8141446 gggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 8141347  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
    | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  8141346 ttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactattcatca 8141274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 11 - 333
Target Start/End: Complemental strand, 9577750 - 9577418
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||||||||| | || |||||||||||||||||||| ||| |||||| ||||||||||||||||||||| ||||||| ||       |    
T  9577750 gggatgtattggattaggattcgaagggattttaaaagactttttaatgatgaaaaagttttgtggtattcaatcaagactatttgcaacttaaaaaaag 9577651  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || | ||||||||| ||||| |||||||||||||||||||||||||| |||| |||||| |||||| |||| ||       |||||||| || ||||     
T  9577650 tattgttgtattcaatcaagaccctttgtcattttaaaaaagtcttgagatattaaatcaaaactttttatcacttaaaaaaagtcttgtgatattcaaa 9577551  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| |||||||||||          |||||| |||||| ||||| |||||||  | |||||| |||||||||||||     
T  9577550 atcattcaaatttagaaggattgtttaataaattggattttgatggattttgtgagattttctagtgaaattttagaatgaaaaaatctttcatgaaaac 9577451  T
Q  301 atgagatttcttgagattggttttattttaaaa 333  Q
    ||||||||||||| ||||| |||| ||||||||    
T  9577450 atgagatttcttgggattgtttttcttttaaaa 9577418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 10 - 312
Target Start/End: Original strand, 35279553 - 35279865
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||| |||||||||| | ||||||| |  ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||           
T  35279553 aggggtgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 35279652  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    | ||| || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| ||||    
T  35279653 gacttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactattaatcacttaaaaaaagtctagtggtattcaa 35279752  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||| ||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||    
T  35279753 aatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaatttcaacatgaaaaagtctttcatgaaaa 35279852  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  35279853 catgagatttctt 35279865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 21222034 - 21222340
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||| |||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       || ||    
T  21222034 tgtattggatcatgattctaagggattttaaaaggcttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagt-tt 21222132  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| | |||| |||| ||||    
T  21222133 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagaggtattcaaaatca 21222232  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  21222233 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctttcatgaaaacatga 21222332  T
Q  305 gatttctt 312  Q
    ||||||||    
T  21222333 gatttctt 21222340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 15 - 309
Target Start/End: Complemental strand, 50192865 - 50192560
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| |||||||||||||||||||| |||||| |||||||||||||||||||||||||| | ||| ||||||        ||||    
T  50192865 tgtattgaatcatgattctaaggaattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagattctttccaatttaaaaaaaatctt 50192766  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatc 213  Q
     || |||||||| |||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||        |||| |||||| |||| |||    
T  50192765 gtgttattcaatcaagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatc 50192666  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    |||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  50192665 attcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 50192566  T
Q  304 agattt 309  Q
    ||||||    
T  50192565 agattt 50192560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 28824686 - 28824380
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||  |||||       |||||    
T  28824686 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtctt 28824587  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||||||||| |||| ||||    
T  28824586 gtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaacagtcttgtggtattcaaaatca 28824487  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||||||| |||||||| ||||||          |||||||||||||||||| ||| | |||||||||| |||||||||||| || |||| ||||    
T  28824486 ttcaaatttcgaa-gattgtttaataaatcagattttgatggattttgtgggattttctagggaaattttaacatgaaaaagtcttttataaaaacatga 28824388  T
Q  305 gatttctt 312  Q
    ||||||||    
T  28824387 gatttctt 28824380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 10 - 312
Target Start/End: Complemental strand, 49198586 - 49198276
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||| |||||||||| | ||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||           
T  49198586 aggggtgtattggatcatgattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt-aaaaaa 49198488  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||| |||||||||||| |||||||| ||| |||||||||| |||||| || |||| ||       ||   |||||| ||||    
T  49198487 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaat-aagactcttaatcacttaaaaaaagttcagtggtattcaa 49198389  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  49198388 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 49198289  T
Q  300 gatgagatttctt 312  Q
     |||| |||||||    
T  49198288 catgatatttctt 49198276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 39 - 319
Target Start/End: Complemental strand, 35679418 - 35679128
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| ||||||||||||||||||||||||| || ||| ||||||       ||||| ||||||||||| |||| ||||||    
T  35679418 attttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaaggctcttttcaatttaaaaaaagtcttgtggtattcaatcaagattctttg 35679319  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||| |||||  |||||||||||||||| || |||| ||       ||| ||||||| |||| |||||||||||||||||||||||||| |    
T  35679318 tcatttaaaaaaaatcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcatgtggtattcaaaatcattcaaatttcgaaggattgtttaa 35679219  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattg 319  Q
    |||||          |||||||  ||||||||| ||||| ||||||| || |||||||||||||||||| | |||||||||||| ||||||    
T  35679218 taaatcagattttgatggatttgatgggattttctagtgaaattttagcatgaaaaagtctttcatgaagacatgagatttcttaagattg 35679128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 64 - 312
Target Start/End: Complemental strand, 19452073 - 19451815
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||||| |||||||||||| |||||    
T  19452073 aaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtat 19451974  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    | |||||||||| || |||| ||       |||| |||||| |||| ||||||||||||||||||||| |||| ||||||          ||||||||||    
T  19451973 ttaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggatcgtttaataaatcagattttgatggattttgt 19451874  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  19451873 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 19451815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 45760324 - 45760016
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || ||| |||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  45760324 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaaaactcttttcaatttaaaaaaagtctt 45760225  T
Q  115 atggtattcaattaagactctttgtc-attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
     || |||||||| |||| |||||||| |||| ||||||||| || ||||||||||||||||| || |||| ||       |||| |||||| |||| |||    
T  45760224 gtgttattcaatcaagattctttgtcaatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatc 45760125  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||| ||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||| ||||||| |||    
T  45760124 attcaaacttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttgatgaaaacatg 45760025  T
Q  304 agatttctt 312  Q
    |||||||||    
T  45760024 agatttctt 45760016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 6304568 - 6304259
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtct 113  Q
    |||||||||| | |||||||  | |||||||||||||||||  | ||| |||||||||||||||||||||||||||| ||| ||||||        ||      
T  6304568 tgtattggatcatgattctaaaggattttaaaagacttttttttcatgaaaaagtcttgtggtattcaatcaagactatttccaatttaaaaaaaagtac 6304469  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    | || |||||||| |||| |||||||||||| |||||||||||| ||||||||| ||| | || || |||| ||       |||| |||||| |||| ||    
T  6304468 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaaccaaaaactcttaatcacttaaaaaaagtctagtggtattcaaaat 6304369  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  6304368 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacat 6304269  T
Q  303 gagatttctt 312  Q
    || |||||||    
T  6304268 gaaatttctt 6304259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 11 - 309
Target Start/End: Complemental strand, 32589272 - 32588963
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa-tttnnnnnnn 109  Q
    |||||||||||||||| |||||||||  ||||||||| ||||||| || ||| ||||||  ||| |||||||||||||||| ||| ||| |||           
T  32589272 gggatgtattggattatgattctatgagattttaaaaaacttttttatcatgaaaaagttatgttgtattcaatcaagactcttttcaactttaaaaaaa 32589173  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
     |||| ||||||||||| |||||||||| |||||  | || | ||||| || |||||||||||||| ||||||| ||       ||||||||||| ||||    
T  32589172 atcttctggtattcaatcaagactctttatcattaaacaagaatcttgtggcattcaatcaagactcttcatcacttaaaagaagtcttgtggtattcaa 32589073  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     ||||||||||||| |||||||||||| ||||||          ||||||||||| |||||| ||||| ||||||| ||  |||||||||||||||||||    
T  32589072 aatcattcaaattttgaaggattgtttaataaatcggattttgatggattttgtgagattttctagtgaaattttagcataaaaaagtctttcatgaaaa 32588973  T
Q  300 gatgagattt 309  Q
     |||||||||    
T  32588972 catgagattt 32588963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 33025398 - 33025696
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| |  | ||||||||||||||| || ||| |||| ||||||||||||||||||| |  |||| ||||||       || ||    
T  33025398 tgtattggatcatgattctaagagaatttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaaaaaattttccaatttaaaaaaagtttt 33025497  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga-cttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
     |  |||||||| |||| |||||| |||||| ||||| ||||| ||||||||||||| | || || |||| ||       ||||||||||| |||| |||    
T  33025498 gtcttattcaatcaagattctttgacatttttaaaaattcttgtggtattcaatcaaaaactcttaatcacttaaaaaaagtcttgtggtattcaaaatc 33025597  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||||| |||||||||||| ||| ||  |||||||||||||||| || |  ||||||| || |||||||||||||||||||| ||||||||||||    
T  33025598 attcaaattttgaaggattgtttaatacatcagattttgtgggattttctaataaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 33025696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 730035 - 730283
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||||||||||  | ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  730035 tgtattggatcatgattctaagggattttaaaagactttttt-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 730133  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatc 213  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| |||||| |||| |||    
T  730134 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaaatc 730233  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    ||||||||||||| | ||||||| ||||||  |||||||  |||||||||    
T  730234 attcaaatttcgacgaattgtttaataaatcagattttgatggattttgt 730283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 312
Target Start/End: Original strand, 49417972 - 49418277
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||| | ||||||| |  ||||||||||||||||| || ||| ||||||| |||| ||||||||||||||| ||| ||||||       ||||| |    
T  49417972 tattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcatgtgatattcaatcaagactctttccaatttagaaaaagtcttgt 49418071  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| || ||||||||| |||||| |  || |||||||||| |||||| || |||| ||       |||| |||||| |||| ||||||    
T  49418072 gttattcaatcaagattcattgtcatttaaaaaaaattatgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 49418171  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||| ||||||||||| ||||||          |||||||||||||||||| || || ||||||| || |||||| ||||||||||||| ||||||    
T  49418172 caaatttcaaaggattgtttaataaatcagattttgatggattttgtgggattttctattgaaattttagcatgaaaaaatctttcatgaaaatatgaga 49418271  T
Q  307 tttctt 312  Q
    ||||||    
T  49418272 tttctt 49418277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 953705 - 953865
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  953705 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 953804  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||| |||||||||    
T  953805 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcgatcaagact 953865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 47654668 - 47654358
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc- 112  Q
    |||||||||| | ||||||| || |||||||||||||||||  || ||| |||||||||||||||||| ||||||||| ||| ||||||       |||     
T  47654668 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcgatcaagactctttccaatttaaaaaaagtct 47654569  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaaga 211  Q
    || || |||||||| |||| |||||||||||| ||| |||||||| ||||||||||||| ||| || |||| ||        |||| |||||| |||| |    
T  47654568 ttgtgttattcaatcaagattctttgtcatttaaaagaagtcttgtggtattcaatcaaaactcttaatcacttaaaaaaaagtctagtggtattcaaaa 47654469  T
Q  212 tcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    | ||||||||||||||||||||||| ||||||          |||||||||||| ||||| ||| | ||||||| || |||||||| ||||||||||| |    
T  47654468 ttattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagggaaattttagcatgaaaaagtatttcatgaaaaca 47654369  T
Q  302 tgagatttctt 312  Q
    |||||||||||    
T  47654368 tgagatttctt 47654358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 22183256 - 22183414
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  | ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       || ||    
T  22183256 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 22183355  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 173  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||    
T  22183356 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaaga 22183414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 110 - 324
Target Start/End: Complemental strand, 37014859 - 37014635
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| |||||||||||||||||||||||||||||  || |||||||| ||||||||||||| | | ||||||| ||       |||||||| || ||||    
T  37014859 gtcttgtggtattcaattaagactctttgtcatttagaagaagtcttgtggtattcaatcaatattcttcatcacttaaaaaaagtcttgtgatattcaa 37014760  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||| || |||||||| ||||||          |||||||||| ||||||| ||||| ||||||| || |||||||||| |||| ||||    
T  37014759 aatcattcaaatttctaaagattgttttataaattgaattttgatggattttgtcggattttctagtgaaattttagcatgaaaaagtctctcataaaaa 37014660  T
Q  300 gatgagatttcttgagattggtttt 324  Q
     |||||||||||| |||||| ||||    
T  37014659 catgagatttcttaagattgttttt 37014635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 64 - 324
Target Start/End: Original strand, 47780645 - 47780916
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggta 162  Q
    |||||||||||| ||||||||||||||| ||| ||||||        ||||| || |||||||| |||| | | |||||||| ||||||||| || ||||    
T  47780645 aaaagtcttgtgttattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaatcaagattatatgtcatttaaaaaaagtcatgtggta 47780744  T
Q  163 ttcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttg 252  Q
    ||||||||||||| || |||| ||       |||| ||| || |||| |||||||||| ||  ||||||||||| ||||||          |||||||||    
T  47780745 ttcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaaattaaaaggattgtttaataaatcagattttgatggattttg 47780844  T
Q  253 tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    ||||||||| ||||| |||||||||| |||||||| ||||||||||| |||||||||||| |||||| ||||    
T  47780845 tgggattttctagtgaaattttaacatgaaaaagtttttcatgaaaacatgagatttcttaagattgttttt 47780916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 19452164 - 19452006
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| ||  || |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  19452164 tgtattggatcatgattctaagggattttaaaagacttttttatcttgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 19452065  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 173  Q
     ||||||||||| ||||||||||   |||| |||||||||||| | |||||||||||||    
T  19452064 gtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 19452006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 42290726 - 42290813
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgca 98  Q
    ||||| |||||||||| |||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||||||    
T  42290726 gggatttattggattaagattctatgggattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgca 42290813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 28 - 261
Target Start/End: Original strand, 29556007 - 29556236
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaatt 127  Q
    ||||||| || ||||||||||||||||| || |    ||||| ||||||||||||||||||||| ||| ||||||       ||||| || |||||||||    
T  29556007 gattctaagggattttaaaagacttttttataa----aaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatt 29556102  T
Q  128 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaa 227  Q
    |||| || |||| |||| |||||||||||| | ||||||||||||||| || |||| ||        ||| ||| || |||| |||||||||||||||||    
T  29556103 aagattcattgttatttaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaaatctagtgttattcaaaatcattcaaatttcgaa 29556202  T
Q  228 ggattgtttgataaattggattttgtgggatttt 261  Q
     |||||||| ||||||| |||||||  |||||||    
T  29556203 agattgtttaataaattagattttgatggatttt 29556236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 17 - 290
Target Start/End: Original strand, 48524208 - 48524490
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||| | ||||||| |||||||||||||||||||| || ||  |||||| |||  |||||||||||||||| ||| ||||||       ||||| |    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt-atcataaaaaagttttgcagtattcaatcaagactctttccaatttaaaaaaagtcttgt 48524306  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| | |||||||||| |||||| || || |||||| |||||| ||| || |||| ||       |||||||| || |||| ||||||    
T  48524307 gttattcaatcaagattttttgtcatttaaaaaaattcatgtggtatttaatcaaaactcttaatcacttaaaaaaagtcttgtgatattcaaaatcatt 48524406  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctt 290  Q
    ||||||| ||| |||||||| ||||||          |||||||||||||||||| ||||| |||||||||| |||||||||||    
T  48524407 caaattttgaaagattgtttaataaatcagtttttgatggattttgtgggattttctagtgaaattttaacatgaaaaagtctt 48524490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 71 - 299
Target Start/End: Original strand, 45535886 - 45536124
Alignment:
Q  71 ttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatca 170  Q
    ||||| ||||||||||||||| ||| ||||||       ||||| || |||||||| || | |||||||||||| || ||||| ||| ||||||||||||    
T  45535886 ttgtgatattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattctttgtcatttaaacaaagtgttgtggtattcaatca 45535985  T
Q  171 agacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattt 260  Q
    ||||| || |||  ||       |||| |||||| |||| ||||||||||||||||| |||||||| ||||||          |||||||||||||||||    
T  45535986 agactcttaatcgcttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattt 45536085  T
Q  261 tgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    | ||||| ||||||| || ||||||||||||||||||||    
T  45536086 tctagtgaaattttagcatgaaaaagtctttcatgaaaa 45536124  T

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Target: chr1; HSP #43
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 38536365 - 38536280
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  38536365 gggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttg 38536280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 38558583 - 38558498
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||| ||||||||| ||||| |||||||||||||||||| ||||  |||||||||||||||||||||||||||| ||||    
T  38558583 gggatgtattgaattaggattatatgggattttaaaagactttttatttataaaaaagtcttgtggtattcaatcaagactctttg 38558498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 167
Target Start/End: Original strand, 47784364 - 47784466
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||| ||||||||||||||||||||||| ||       ||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||    
T  47784364 aaaagtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtca-tttaaaaaagtcttgtggtat 47784462  T
Q  164 tcaa 167  Q
    ||||    
T  47784463 tcaa 47784466  T

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Target: chr1; HSP #46
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 42 - 157
Target Start/End: Original strand, 14494122 - 14494237
Alignment:
Q  42 ttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtca 141  Q
    |||||||||||||| || ||| |||| ||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||    
T  14494122 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 14494221  T
Q  142 ttttaaaaaagtcttg 157  Q
    ||| ||||||||||||    
T  14494222 tttaaaaaaagtcttg 14494237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 285
Target Start/End: Original strand, 47784368 - 47784542
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||||| ||||  | || |||||||||||| ||||||||||||||||| ||  ||||||       ||||||||||| ||||    
T  47784368 gtcttgtgatattcaatcaagactttttgcaagttaaaaaaagtcttgtggtattcaatcaagactctttgtcatttaaaaaa-gtcttgtggtattcaa 47784466  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaa 285  Q
     || ||||||| ||| || |||||||| ||||||||||||||||| |||||| ||||  ||||||| || ||||||    
T  47784467 aattattcaaacttctaaagattgtttaataaattggattttgtgagattttctagttaaattttagcatgaaaaa 47784542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 47780505 - 47780592
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||| | ||||||| | |||||||||||| ||||| || ||| |||||||||||||||||||||||||||| ||| ||||||    
T  47780505 tgtattggatcatgattctaagaaattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaattt 47780592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 197 - 312
Target Start/End: Complemental strand, 31572329 - 31572204
Alignment:
Q  197 ttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaag 286  Q
    |||||||| |||| |||||| ||||||||||||||||||| ||||||          |||||||||||||||||| ||||| |||||||  | |||||||    
T  31572329 ttgtggtattcaaaatcatttaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttaggatgaaaaag 31572230  T
Q  287 tctttcatgaaaagatgagatttctt 312  Q
    ||||||||||||  ||||||||||||    
T  31572229 tctttcatgaaatcatgagatttctt 31572204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 39 - 93
Target Start/End: Original strand, 42657741 - 42657795
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagacttt 93  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  42657741 attttaaaagactttttaattataaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 25831224 - 25831139
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||| ||| ||| | ||||||| ||||||||||||||||||||||||||| |||| |||| || |||||||| |||||||||||    
T  25831224 gggatgcattcgatcatgattctaaggaattttaaaagactttttaattatgaaaaaatcttttgatattcaattaagactttttg 25831139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 19007636 - 19007581
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| || ||| |||||||| ||||||||||||||||||||||    
T  19007636 attttaaaagacttttttataatgaaaaagtctagtggtattcaatcaagactttt 19007581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 51826893 - 51826838
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||||||||||    
T  51826893 attttaaaagactttttaataataaaaaaatcttgtggtattcaatcaagactttt 51826838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 19452111 - 19452046
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| ||||||||||| ||||||||||   |||| |||||||||||| |||||||||||||||||    
T  19452111 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 19452046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 27198274 - 27198353
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||  || | || || |||||||||||||||||  ||||  |||||||||||||||||||||||| ||||||    
T  27198274 tgtattggattgagactttaagggattttaaaagactttttgtttataaaaaagtcttgtggtattcaatcaaaactttt 27198353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 48194617 - 48194672
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |  ||| |||||||| ||||||||||||||||||||||    
T  48194617 attttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 48194672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 48203375 - 48203430
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |  ||| |||||||| ||||||||||||||||||||||    
T  48203375 attttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 48203430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 102
Target Start/End: Complemental strand, 31572464 - 31572390
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    ||||||| || ||||||| ||||||||| || ||| ||||||||||||||||||| |||| |||| || ||||||    
T  31572464 gattctaagggattttaagagacttttttatcatgaaaaagtcttgtggtattcattcaaaacttcttccaattt 31572390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 206 - 275
Target Start/End: Original strand, 955827 - 955896
Alignment:
Q  206 tcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaatttta 275  Q
    |||| ||||||||||||||||||| |||||| ||||||  |||||||  ||||||| ||||| |||||||    
T  955827 tcaaaatcattcaaatttcgaagggttgtttaataaatcagattttgatggattttctagtgaaatttta 955896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 141 - 178
Target Start/End: Original strand, 10896845 - 10896882
Alignment:
Q  141 attttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||||||||| |||||||||||||||||||||    
T  10896845 attttaaaaaagtctttaggtattcaatcaagactttt 10896882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 1928442 - 1928406
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1928442 ttttaaaaaagtctttaggtattcaatcaagactttt 1928406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 261
Target Start/End: Complemental strand, 31622591 - 31622527
Alignment:
Q  197 ttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggatttt 261  Q
    |||| ||| |||| |||||||||||||| || |||||||| |||||| |||||||||| ||||||    
T  31622591 ttgttgtattcaaaatcattcaaatttcaaaagattgtttaataaatcggattttgtgagatttt 31622527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 36402293 - 36402329
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36402293 ttttaaaaaagtctttaggtattcaatcaagactttt 36402329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 14555368 - 14555313
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| || ||  |||||| | ||||||||||||||||||||||    
T  14555368 attttaaaagacttttttataataaaaaagtttggtggtattcaatcaagactttt 14555313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 173
Target Start/End: Original strand, 14494149 - 14494211
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 173  Q
    |||| ||||||||||| ||||||||||   |||| |||||||||||| | |||||||||||||    
T  14494149 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 14494211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 15 - 87
Target Start/End: Original strand, 19893454 - 19893526
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    ||||||| |||| |||| || || |||||||||||||||||||| ||  |||| |||||  ||||||||||||    
T  19893454 tgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaaatcttggagtattcaatcaa 19893526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 29208801 - 29208837
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  29208801 ttttaaaaatgtctttaggtattcaatcaagactttt 29208837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 33243348 - 33243312
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||||| || |||||||||||||||||||||    
T  33243348 ttttaaaaaagtttttaggtattcaatcaagactttt 33243312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 33263521 - 33263485
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||||| || |||||||||||||||||||||    
T  33263521 ttttaaaaaagtttttaggtattcaatcaagactttt 33263485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 177
Target Start/End: Original strand, 42657763 - 42657795
Alignment:
Q  145 taaaaaagtcttgaggtattcaatcaagacttt 177  Q
    ||||||||||||| |||||||||||||||||||    
T  42657763 taaaaaagtcttgtggtattcaatcaagacttt 42657795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 238; Significance: 1e-131; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-131
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 18306278 - 18305935
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||| |||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  18306278 gggatgtattgaattaggattctatggaattttagaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 18306179  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  18306178 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 18306079  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18306078 atcattcaaatttcgaaagattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 18305979  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||| | || |||||||||||||||||| ||| ||||||    
T  18305978 ttgagattgttattcttttaaaagttactatctctttcttctca 18305935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 14782452 - 14782099
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  14782452 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 14782353  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  14782352 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 14782253  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14782252 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 14782153  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14782152 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 14782099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 44726127 - 44725774
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  44726127 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 44726028  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  44726027 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 44725928  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44725927 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 44725828  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  44725827 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 44725774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 7466224 - 7466566
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  7466224 gggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 7466323  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||       ||||||||||| ||||     
T  7466324 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaa 7466423  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7466424 atcattcaaattttgaagaattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 7466523  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||| |||| ||||||||||||| |||| ||| |||||    
T  7466524 ttgagattgtttttcttttaaaagttacgatctctttcttctc 7466566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 343
Target Start/End: Complemental strand, 19718196 - 19717856
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| || ||||||||||||||||||||||||||||       |||    
T  19718196 gatgtattggattaggattctatgggattttaaaagaccttttaattatgaaaaagtcctgcggtattcaatcaagactttttgcaatttaaaaaaagtc 19718097  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||| ||    
T  19718096 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaat 19717997  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||| ||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  19717996 cattcaaatttcgaagaattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 19717897  T
Q  303 gagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  19717896 gagatttcttgagattgtttttgttttaaaagttactatct 19717856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 18959044 - 18958706
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||       |    
T  18959044 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtagtattcaatcaagactttttgcaatttaaaaaaag 18958945  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  18958944 tcttgtggtattcaatcaagactctttatcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 18958845  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18958844 atcattcaaatttcgaaggattgtttaataaattggattttaatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 18958745  T
Q  301 atgagatttcttgagattggttttattttaaaagttact 339  Q
    || |||||| ||||||||| |||| ||||||||||||||    
T  18958744 attagattttttgagattgtttttgttttaaaagttact 18958706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 42306102 - 42305774
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||       |    
T  42306102 gggatgtattggattaggattctatgtgattttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaagaatttttgcaatttaaaaaaag 42306003  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||     
T  42306002 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaa 42305903  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    || ||||||||||||||||||||||| || |||||||||||   |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  42305902 ataattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtcattcatgaaaaaatgagatttc 42305803  T
Q  311 ttgagattggttttattttaaaagttact 339  Q
    ||||||||| |||| |||| |||||||||    
T  42305802 ttgagattgtttttgtttttaaagttact 42305774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 17 - 353
Target Start/End: Complemental strand, 39467778 - 39467433
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||| ||       ||||| |    
T  39467778 tattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaa-gtcttgt 39467680  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||| ||||||    
T  39467679 ggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcatt 39467580  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||||||||||||||| ||||||          |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39467579 caaatttcgaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaagatgaga 39467480  T
Q  307 tttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||| ||||||||| |||| |||||||||||||||||| ||| |||||    
T  39467479 ttttttgagattgtttttcttttaaaagttactatctctttcttctc 39467433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 337
Target Start/End: Original strand, 16362085 - 16362411
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| || ||            
T  16362085 gggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgtaacttaaaaaaaa 16362184  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       |||| |||||| ||||     
T  16362185 tcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtctcgtggtattcaaa 16362284  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||| ||||| || |||||||||||||||    
T  16362285 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaaatcttttataaaaagatgagatttc 16362384  T
Q  311 ttgagattggttttattttaaaagtta 337  Q
    ||||||||| |||| ||||||||||||    
T  16362385 ttgagattgtttttcttttaaaagtta 16362411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 11 - 337
Target Start/End: Original strand, 31623584 - 31623900
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||| || ||       |    
T  31623584 gggatgtattggattaggattctatggaattttaaaagattttttaattatgaaaaagtcttgtggcattcaatcaagactttttgtaacttaaaaaaag 31623683  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  31623684 tctcttggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 31623783  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||          ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  31623784 atcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaagataagatttc 31623873  T
Q  311 ttgagattggttttattttaaaagtta 337  Q
    ||||||||| |||| ||||||||||||    
T  31623874 ttgagattgtttttcttttaaaagtta 31623900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 13 - 337
Target Start/End: Complemental strand, 10295696 - 10295360
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||       |||    
T  10295696 gatgtattggattaggattctatgggattttaaaagagtttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaagaaaagtc 10295597  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||| ||||||| ||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||| ||    
T  10295596 ttctggcattcaatcaagactcttcgtcacttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 10295497  T
Q  213 cattcaaatttcgaaggattgtttgataaattgga-----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    |||||||||||||||||||||||| ||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10295496 cattcaaatttcgaaggattgtttaataaattggattttgatggatttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 10295397  T
Q  302 tgagatttcttgagattg-gttttattttaaaagtta 337  Q
    ||||||||||||||||||  |||| ||||||||||||    
T  10295396 tgagatttcttgagattgtttttttttttaaaagtta 10295360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 64 - 341
Target Start/End: Original strand, 32497467 - 32497744
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||||||||||| ||        |||| ||||||||||| || |||||||||||||||||||||||||||||||||    
T  32497467 aaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaatactctttgtcattttaaaaaagtcttgaggtat 32497566  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    |||||||||||||||||||| ||       ||||||||||| |||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  32497567 tcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaataaattggattttgtgggattttgt 32497666  T
Q  264 agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactat 341  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  32497667 agtgtaattttaacaagagaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 32497744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 9288767 - 9288436
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||||||||       ||||||||||||||||||       |    
T  9288767 gggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggt-------caagactttttgcaatttaaaaaaag 9288675  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       ||||||||||| ||||     
T  9288674 tcttgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaaa 9288575  T
Q  211 atcattcaaatttcgaaggattgtttgataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9288574 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 9288475  T
Q  301 atgagatttcttgagattggttttattttaaaagttact 339  Q
    ||||||||||||||||||| |||| ||||||||||||||    
T  9288474 atgagatttcttgagattgtttttcttttaaaagttact 9288436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 302
Target Start/End: Complemental strand, 4031575 - 4031294
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||       |    
T  4031575 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagactttttgcaatttaaaaaaag 4031476  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||| ||||     
T  4031475 tcttgtggtattcaatcaagaatctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcataaattaaaaaaagtcttgtggtattcaaa 4031376  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||||| |||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4031375 atcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 4031294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 26855957 - 26856308
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||  ||||||| |||||| ||||||||||||||||||||||||||||| ||            
T  26855957 gggatgtattggattaggattctatgagattttaaaagacttt--aattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaa 26856054  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtctt-gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    | || ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||       ||||||||||| ||||    
T  26856055 tattgtggtattcaatcaagactctttgtcattttaaaaaagtctttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 26856154  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||| ||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  26856155 aatcattcaaatttcgaagtattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcagaaaaa 26856254  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
     || |||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  26856255 aataagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 26856308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 150; E-Value: 4e-79
Query Start/End: Original strand, 11 - 339
Target Start/End: Original strand, 4402996 - 4403334
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||| ||||  ||||||||||||||||||||| || ||||||||| |||||||||||||| ||||||||||| ||       |    
T  4402996 gggatgtattggattatgattatatgagattttaaaagactttttaattgtgaaaaagtcttttggtattcaatcaaaactttttgcaacttaaaaaaag 4403095  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| ||||||| || ||||||||||||| |||||| ||||||||| |||| ||||||||| ||        ||| |||||| ||||     
T  4403096 tcttgtggtattcaatcaagactcattttcattttaaaaaaatcttgaagtattcaattaagatttttcatcacttaaaaaaaatctcgtggtattcaaa 4403195  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||| |||||||||||||||||||||||||||||||||||||     
T  4403196 atcattcaaatttcgaaggattgtttaataaattgggttttgatggattttgtgggattttttagtgtaattttaacaagaaaaagtctttcatgaaaat 4403295  T
Q  301 atgagatttcttgagattggttttattttaaaagttact 339  Q
    ||||||||||||| ||||| |||| ||||||||||||||    
T  4403296 atgagatttcttgggattgtttttcttttaaaagttact 4403334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 110 - 343
Target Start/End: Complemental strand, 43166908 - 43166665
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||| ||||  |||| |||||||||||| ||||||||||||||||| ||  ||||||       ||||||||||| ||||    
T  43166908 gtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| |||||||||||||||          ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  43166808 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtttttcatgaaaa 43166709  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  43166708 gatgagatttcttgagattggttttcttttaaaagttactatct 43166665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 41478990 - 41479287
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       || ||    
T  41478990 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 41479089  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||| |||| ||||    
T  41479090 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatca 41479189  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||||||||||||| |||||||| ||||||  |||||||||||||||| ||||  ||||||| || |||||| ||||||||||||| ||||||||||||    
T  41479190 ttcaaatttcgaatgattgtttaataaatcagattttgtgggattttctagtaaaattttagcatgaaaaaatctttcatgaaaacatgagatttctt 41479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 312
Target Start/End: Complemental strand, 26374745 - 26374436
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||| ||||||||||||||| ||| ||||||       |    
T  26374745 gggatgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaag 26374646  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |  | || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| ||||     
T  26374645 t--tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaa 26374548  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||     
T  26374547 atcattcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 26374448  T
Q  301 atgagatttctt 312  Q
    ||||||||||||    
T  26374447 atgagatttctt 26374436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 147 - 339
Target Start/End: Original strand, 37857144 - 37857336
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgg 246  Q
    ||||||| |||||||||||||| |||| ||||||||| ||       ||||||||||| ||||  ||||||||||||  ||||||||||| |||||||||    
T  37857144 aaaaagttttgaggtattcaattaagatttttcatcacttaaaaaaagtcttgtggtattcaaattcattcaaattttaaaggattgtttaataaattgg 37857243  T
Q  247 attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttact 339  Q
    ||||||  ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||    
T  37857244 attttgatggattttgtagtgtaatttgaacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttact 37857336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 17 - 312
Target Start/End: Complemental strand, 42938428 - 42938123
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    ||||||||||  ||| || || ||||||||||||||||| |  ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| |    
T  42938428 tattggattataattttaagggattttaaaagacttttttaccatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgt 42938329  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||    
T  42938328 gttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 42938229  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| |  |||||||||||||||||||| ||||||    
T  42938228 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcctgaaaaagtctttcatgaaaacatgaga 42938129  T
Q  307 tttctt 312  Q
    ||||||    
T  42938128 tttctt 42938123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 43166969 - 43166809
Alignment:
Q  7 aagagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 106  Q
    |||||| ||||||||||||| |||| ||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||        
T  43166969 aagaggaatgtattggattaagattttatgggattttaaaatactttttaattaagaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaa 43166870  T
Q  107 nnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
       ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  43166869 aaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgtggtattcaa 43166809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 2705108 - 2704825
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||| ||||| || ||| |||||||||||||||||||||||||||| ||| ||| ||       ||||| || |||||||| |||| ||||||    
T  2705108 attttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaaattaaaaaaagtcttgtgttattcaatcaagattctttg 2705009  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||||||||||||| |||||||| |    
T  2705008 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaa 2704909  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||          |||||||||||||||||| |||||  |||||| || |||||||||||||||||||| ||||||||||||    
T  2704908 taaatcaaattttgatggattttgtgggattttctagtgatattttagcatgaaaaagtctttcatgaaaacatgagatttctt 2704825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 308
Target Start/End: Complemental strand, 23115481 - 23115179
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  23115481 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 23115382  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| ||||| |||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  23115381 gtgttattcaatcaagattctttgtcatttaaaaaatgtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa-atca 23115283  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||| |||||||||||| ||||||          |||||||||||||||||| || || ||||||  || |||||||||||||||||||| ||||    
T  23115282 ttcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttggcatgaaaaagtctttcatgaaaacatga 23115183  T
Q  305 gatt 308  Q
    ||||    
T  23115182 gatt 23115179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 42735590 - 42735283
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  42735590 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 42735491  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| ||||| |||||| ||||||| |||| |||||||||| |||||| || |||| ||       |||| |||||| |||| ||||    
T  42735490 gtgttattcaatcaagattctttatcatttaaaaaaagacttgtggtattcaattaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 42735391  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||| ||||||| ||||||          |||||||||||||||||| ||||| ||||||| |  ||||||||||||||| |||| ||||    
T  42735390 ttcaaatttcgaagtattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcttgaaaaagtctttcataaaaacatga 42735291  T
Q  305 gatttctt 312  Q
    ||||||||    
T  42735290 gatttctt 42735283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 39 - 312
Target Start/End: Original strand, 43959574 - 43959847
Alignment:
Q  39 attttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactcttt 137  Q
    |||||||||||||||||  || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||    
T  43959574 attttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattcttt 43959673  T
Q  138 gtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttg 237  Q
    ||||||||||||||||||||  |||||||||||||| | || |||| ||       | || |||||| |||| ||||||||||||||||| ||||||||     
T  43959674 gtcattttaaaaaagtcttg-tgtattcaatcaagattcttaatcacttcaaaaaagactagtggtattcaaaatcattcaaatttcgaatgattgttta 43959772  T
Q  238 ataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||||||  |||||||  ||||||||| ||| ||||||| || |||||||||||| || |||| ||||||||||||    
T  43959773 ataaatcagattttgatggattttgtggtgaaattttagcatgaaaaagtctttaattaaaacatgagatttctt 43959847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 5576934 - 5576626
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||||| ||||||| || ||||||||||| |||||  | ||| || ||||||||||||||||||||||||| ||| ||||||       |||||    
T  5576934 tgtattggattatgattctaagggattttaaaagatttttttgtcatgaaatagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 5576835  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatc 213  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  |||||| |||| |||    
T  5576834 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtcaagtggtattcaaaatc 5576735  T
Q  214 attcaaatttcgaaggattgtttgataaa----------ttggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||||||| ||||||| |||||           |||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||    
T  5576734 attcaaatttcgaagaattgtttaataaaccagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttttatgaaaacatg 5576635  T
Q  304 agatttctt 312  Q
    |||||||||    
T  5576634 agatttctt 5576626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 299
Target Start/End: Complemental strand, 32711595 - 32711313
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| |  | ||||||||||||||| || ||| |||||| ||||||||||||||||||||| ||| ||||||       |||||    
T  32711595 tgtattggatcatgattctaagagactttaaaagacttttttatcatgaaaaagttttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 32711496  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  32711495 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 32711396  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    || ||||||||||||||||||| ||||||  |||||||||| |   | || || ||||||| || ||||||||||||||||||||    
T  32711395 tttaaatttcgaaggattgtttaataaatcagattttgtggaa--atctattgaaattttagcatgaaaaagtctttcatgaaaa 32711313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 7507212 - 7506905
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||          ||    
T  7507212 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagttt 7507113  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || ||||||||  ||| || ||||||||| | |||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| | ||    
T  7507112 gtgttattcaatcgagattccttgtcatttaagaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaacca 7507013  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||| ||| ||||    
T  7507012 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgtaaacatga 7506913  T
Q  305 gatttctt 312  Q
    ||||||||    
T  7506912 gatttctt 7506905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 12 - 171
Target Start/End: Original strand, 32497373 - 32497532
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||| ||       ||    
T  32497373 ggatgtattggattaggattctatgggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagt 32497472  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaa 171  Q
    ||| ||||||||||| |||||| ||||  | || |||||| ||||| |||||||||||||    
T  32497473 cttgtggtattcaatcaagactttttgcaacttaaaaaaaatcttgtggtattcaatcaa 32497532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 24502031 - 24501819
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||| ||||| |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| ||||    
T  24502031 gtcttgtgttattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24501932  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  24501931 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 24501832  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  24501831 catgagatttctt 24501819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 111 - 309
Target Start/End: Complemental strand, 10392454 - 10392246
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    ||||||| |||||||| |||| ||||||||||||||||||| ||||| | |||||||||||||||||| |||| ||       |||| |||||| |||      
T  10392454 tcttatgttattcaatcaagattctttgtcattttaaaaaattcttgtgatattcaatcaagacttttaatcacttaagaaaagtctagtggtattcaga 10392355  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||| |||||||||||||     
T  10392354 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaac 10392255  T
Q  301 atgagattt 309  Q
    |||||||||    
T  10392254 atgagattt 10392246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 42937253 - 42937551
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||| || || ||||||||||||||||| || ||| ||||||||||||||||||||||||          |||||       |||||    
T  42937253 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaacca-------aatttaaaaaaagtctt 42937345  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| | |||||||||| |||||||||||| |||||||||||  |||| || |||| ||       |||| |||||| |||| ||||    
T  42937346 gtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtggtattcaatc--gactcttaatcacttaaaaaaagtctagtggtattcaaaatca 42937443  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| ||  ||||||||||||||||||| ||||    
T  42937444 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcattaaaaagtctttcatgaaaacatga 42937543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 14 - 87
Target Start/End: Complemental strand, 43308593 - 43308520
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  43308593 atgtattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcttctggtattcaatcaa 43308520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 116 - 336
Target Start/End: Complemental strand, 39190025 - 39189798
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||||||||||  |||| |||||||||||| |||||||||| || ||| || |||||||       ||||  || || |||| |||||    
T  39190025 tggtattcaatcaagactctttgcaatttaaaaaaagtcttgtggtattcaataaaaactctttatcatttaaaaaaagtctcatg-tattcaacatcat 39189927  T
Q  216 tcaaatttcgaaggattgtttgataaattg---------gattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    ||||||||||||||||||||| ||||||||         |||||||  | ||||| ||||  ||||||||||||||||| ||||||||||||| ||||||    
T  39189926 tcaaatttcgaaggattgtttaataaattgaatttgatggattttgatgaattttctagta-aattttaacaagaaaaaatctttcatgaaaacatgaga 39189828  T
Q  307 tttcttgagattggttttattttaaaagtt 336  Q
    ||||||| ||||| |||| |||||||||||    
T  39189827 tttcttgggattgtttttcttttaaaagtt 39189798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 14 - 155
Target Start/End: Complemental strand, 39190085 - 39189944
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||| |    | ||||||||||||||||||||| ||||||||||       ||||    
T  39190085 atgtattggattaggattctaagggattttaaaagactttttaattatgaattttttttgtggtattcaatcaagactctttgcaatttaaaaaaagtct 39189986  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtct 155  Q
    | ||||||||||| || ||||||| |||||| ||||||||||    
T  39189985 tgtggtattcaataaaaactctttatcatttaaaaaaagtct 39189944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 268
Target Start/End: Original strand, 41069866 - 41070091
Alignment:
Q  44 aaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcatt 143  Q
    |||||||||||| |||||  |||||| || ||||||||||| |||| | ||| ||| ||       |||||||| |||||||| |||||| |  ||||||    
T  41069866 aaaagactttttcattataaaaaagttttctggtattcaataaagattctttacaacttaaaaaatgtcttatgatattcaatcaagactttacgtcatt 41069965  T
Q  144 ttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaa 242  Q
    |  ||||||| ||| ||||||||| ||||||| ||||| ||||         |||||||||| | || ||||||| |||||| || ||||||||||||||    
T  41069966 tataaaaagttttgtggtattcaaccaagactcttcataatttaaaaaaaaatcttgtggtatttaaaatcattccaatttcaaatgattgtttgataaa 41070065  T
Q  243 ttggattttgtgggattttgtagtgt 268  Q
    ||| ||||| ||||||||| ||||||    
T  41070066 ttgaattttctgggattttctagtgt 41070091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 24214909 - 24214817
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||| |||||||||| | |||||||  | ||||||||||||||||| || ||  |||||||||||||||||||||||||||| ||| ||||||    
T  24214909 aggggtgtattggatcatgattctaaaggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactcttttcaattt 24214817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 24502084 - 24501932
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  | ||||||||||||||||| || ||| |||||||||||| ||||||||||||| | |||   ||||       |||||    
T  24502084 tgtattggatcatgattctaaaggattttaaaagacttttttatcatgaaaaagtcttgtgttattcaatcaagattctttatcatttaaaaaaagtctt 24501985  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
     ||||||||||| |||||||||  ||| || |||||||||| | |||||||||    
T  24501984 gtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 24501932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 28 - 91
Target Start/End: Original strand, 26373711 - 26373774
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagact 91  Q
    ||||||| || ||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  26373711 gattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 26373774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 14061544 - 14061628
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||| ||||||| ||| ||||| ||||||||||||||||||||||| |   |  |||||||||||||||||||||||||| ||||    
T  14061544 aggggtgtattgtattgggattttatggaattttaaaagacttttttaaagtaaaaaagtcttgtggtattcaatcaagattttt 14061628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 37857092 - 37857175
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||| ||||||||||| ||| || || ||||||||||| |||||||||||| |||||| ||| |||||||||| |||| ||||    
T  37857092 gggatatattggattagaattttacgggattttaaaagattttttaattatgaaaaagttttgaggtattcaattaagattttt 37857175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 194 - 265
Target Start/End: Complemental strand, 13478384 - 13478313
Alignment:
Q  194 gtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtag 265  Q
    ||||||| ||| |||| ||| || ||||||||||||||||||| ||||||| ||||| || |||||||||||    
T  13478384 gtcttgtagtattcaaaatcttttaaatttcgaaggattgtttaataaattagatttcgttggattttgtag 13478313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 10802829 - 10802773
Alignment:
Q  38 aattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||| ||| |  ||||||||| |||||||||||||||| ||||    
T  10802829 aattttaaaagacttttttattttataaaagtcttctggtattcaatcaagattttt 10802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 178
Target Start/End: Original strand, 32497429 - 32497497
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||| ||||||||||| |||||| |||   | || |||||||||||| ||||||||||||||||||||    
T  32497429 gtcttgtggtattcaatcaagactttttacaacttaaaaaaagtcttgtggtattcaatcaagactttt 32497497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 1606070 - 1606015
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  1606070 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 1606015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 2112818 - 2112873
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  2112818 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 2112873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 8 - 183
Target Start/End: Complemental strand, 9771135 - 9770962
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 107  Q
    ||||||||||||||||||| |||| || || ||||||||| | ||||  || ||| |||||  |||||  |||||||||| ||| ||||||| ||         
T  9771135 agagggatgtattggattaagattttaagggattttaaaatattttt--atcatgaaaaagcattgtgtcattcaatcaatactctttgcaacttaaaaa 9771038  T
Q  108 nngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
      || || |  |||||||| |||| ||||| |||||| |||||||||  |  ||||||||||||||||||| ||||    
T  9771037 aagttttgttttattcaatcaagaatctttctcatttaaaaaaagtcacgttgtattcaatcaagactttttatca 9770962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 29260357 - 29260278
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||  |||| ||  | |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  29260357 tgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 29260278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 43605421 - 43605366
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  43605421 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 43605366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 175
Target Start/End: Complemental strand, 4302846 - 4302813
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||||||||||||| ||||||||||||||||||    
T  4302846 ttttaaaaaagtctttaggtattcaatcaagact 4302813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 87
Target Start/End: Original strand, 35142040 - 35142117
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    |||| |||||||||||  |||| ||  | |||||||||||||||||  || |  ||||||||||||||||||||||||    
T  35142040 aggggtgtattggattgagattttaatggattttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaa 35142117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 7148073 - 7148121
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    |||||||||||||||||  || |  ||||||||||||||||||||||||    
T  7148073 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 7148121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 37567401 - 37567365
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  37567401 ttttaaaaaagtctttaggtattcaattaagactttt 37567365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 101)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 36674448 - 36674095
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  36674448 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 36674349  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  36674348 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 36674249  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36674248 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 36674149  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  36674148 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 36674095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 341
Target Start/End: Complemental strand, 50762368 - 50762038
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||       |    
T  50762368 gggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaag 50762269  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||       ||||||||||| ||||     
T  50762268 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcatgacttttcataatttaaaaaaagtcttgtggtattcaaa 50762169  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    ||||||| ||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50762168 atcattctaatttcgaatgattgtttgataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 50762069  T
Q  311 ttgagattggttttattttaaaagttactat 341  Q
    ||||||||| |||| ||||||||||||||||    
T  50762068 ttgagattgtttttcttttaaaagttactat 50762038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 11 - 337
Target Start/End: Original strand, 11431414 - 11431750
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  11431414 gggatgtattggattaggattctataagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 11431513  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  11431514 tcttgtggtattcaataaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 11431613  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||| ||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11431614 atcatttaaatttcgaaggattgtttaataaattggattttggtggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 11431713  T
Q  301 atgagatttcttgagattggttttattttaaaagtta 337  Q
    ||||||||||||||||||| |||||||||||||||||    
T  11431714 atgagatttcttgagattgtttttattttaaaagtta 11431750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 44906831 - 44906479
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  44906831 gggatatattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 44906732  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  44906731 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 44906632  T
Q  211 atcattcaaatttcgaaggattgtttgataaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| |||||||||          |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  44906631 atcattcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagaaaatgtctttcatgaaaag 44906532  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  44906531 atgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 44906479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 23753704 - 23753383
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  23753704 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 23753605  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  23753604 tcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 23753505  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||          ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23753504 atcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaagaaaaagtctttcatg-aaagatgagatttc 23753416  T
Q  311 ttgagattggttttattttaaaagttactatct 343  Q
    ||||||||| |||| ||||||||||||||||||    
T  23753415 ttgagattgtttttgttttaaaagttactatct 23753383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 10660423 - 10660752
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  10660423 gggatgtattggattaagattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 10660522  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||| ||||     
T  10660523 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtattgtggtattcaaa 10660622  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||              ||||||||||||||||||    
T  10660623 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaaca--------------atgaaaagatgagatttc 10660708  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||| ||||||||||||||||||||| ||||| ||||||    
T  10660709 ttgagattgtttttattttaaaagttactatttttttcttctca 10660752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 31646602 - 31646251
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  31646602 gggatgtattgaattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 31646503  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||        |||||||||| ||||     
T  31646502 tcttatggtattcaatcaagactctttgttattttaaaaaagtcttgacgtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaa 31646403  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||||||| |||||||| || |||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  31646402 atcattcaaatttcgaaagattgtttaatgaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa-- 31646305  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| | || ||||||||||||||| || ||| ||||||    
T  31646304 atgagatttcttgagattgttattcttttaaaagttactacctctttcttctca 31646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 20 - 354
Target Start/End: Original strand, 54628740 - 54629085
Alignment:
Q  20 tggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggt 119  Q
    |||||||||||||||||  |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||       ||||| ||||    
T  54628740 tggattaggattctatgagattttaaaagactttttaattatgaaaacgtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggt 54628839  T
Q  120 attcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatcattca 218  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||            |||||||||| |||| ||||||||    
T  54628840 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacaaaaaaaaaaatcttgtggtattcaaaatcattca 54628939  T
Q  219 aatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    |||||| ||||||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  54628940 aatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatt 54629039  T
Q  309 tcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||| |||| |||| ||||||||||||| ||| ||||||    
T  54629040 tcttgagattgtttttcttttgaaagttactatctctttcttctca 54629085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 40897031 - 40897375
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaag-tcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    ||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||  ||||||||||||||||||||| ||||||||| ||           
T  40897031 gggatgtattggattaggattctatgggattttaaaacactttttaattatgaaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaa 40897130  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||| ||||| ||||    
T  40897131 gtcttgtggtattcattcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttatggtattcaa 40897230  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40897231 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaa 40897330  T
Q  300 gatgagatttcttgagattggttttatttt-aaaagttactatct 343  Q
    ||||||||||||||| |||| |||| ||||  |||||||||||||    
T  40897331 gatgagatttcttgatattgtttttcttttgtaaagttactatct 40897375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 173; E-Value: 7e-93
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 52618283 - 52617937
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| ||||||| |||||| || ||       |    
T  52618283 gggatgtattagattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcgatcaagattttttgtaacttaaaaaaag 52618184  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    || | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  52618183 tcatgtgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 52618084  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||      ||||||||||| |||||    
T  52618083 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaac------aagtctttcataaaaag 52617990  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  52617989 atgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 52617937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 26107149 - 26107501
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||||||||  ||||||||||||||||||||||| ||       |    
T  26107149 gggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtaatattcaatcaagactttttgcaacttaaaaaa-g 26107247  T
Q  111 tctta-tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| | ||| ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||    
T  26107248 tcttagtcgtactcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcaattaaaaaaagtcttgtggtattcaa 26107347  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          ||||||||||| |||||||||||||||||||||||||||||||| |||||| ||||    
T  26107348 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgtgattttgtagtgtaattttaacaagaaaaagtatttcataaaaa 26107447  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||||||||||| |||| |||||||||||||| ||| ||| |||||    
T  26107448 gatgagatttcttgagattgtttttcttttaaaagttactttctctttcttctc 26107501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 110 - 341
Target Start/End: Complemental strand, 10728860 - 10728629
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| | ||    
T  10728860 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttacaaaaagtcttgtggtatttaa 10728761  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10728760 aatcattcaaatttggaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 10728661  T
Q  310 cttgagattggttttattttaaaagttactat 341  Q
    |||||||||| |||| ||||||||||||||||    
T  10728660 cttgagattgtttttcttttaaaagttactat 10728629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 48379048 - 48379397
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    |||||||||||||| |||||||| | |||||||||||||||||||||||  |||||||| ||||||||||||||| | ||||||||| ||        ||    
T  48379048 gatgtattggattatgattctataggattttaaaagactttttaattatcaaaaagtctcgtggtattcaatcaaaattttttgcaacttaaaaaaaatc 48379147  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || || | |||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||       ||||||||||| |||| ||    
T  48379148 ttgtgat-ttcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatctagacttttcatcacttaaaaaaagtcttgtggtattcaaaat 48379246  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  48379247 cattcaaatttcgaaggattgtttaataaattgaattttgatggattttgtgggattttgtagtgtaattttaataagaaaatgtctttcatgaaaagat 48379346  T
Q  303 gagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
     |||||||||||||||| |||| ||||||| |||||||||| ||| |||||    
T  48379347 cagatttcttgagattgtttttcttttaaatgttactatctctttcttctc 48379397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 326
Target Start/End: Complemental strand, 50903561 - 50903233
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||| |||| |||||||||| ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||| ||       |    
T  50903561 gggatgtattgaattatgattctatgggattttaaaatactttttaagtatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 50903462  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt---nnnnnnngtcttgtggtactc 207  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||          ||||||||||| ||    
T  50903461 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtattcaatcaagactttttatcatttaaaaaaaaaagtcttgtggtattc 50903362  T
Q  208 aagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 297  Q
    || ||||||||||||  |||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  50903361 aaaatcattcaaattaagaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaa 50903262  T
Q  298 aagatgagatttcttgagattggttttat 326  Q
    || ||||||||||||||||||| ||||||    
T  50903261 aatatgagatttcttgagattgtttttat 50903233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 51738043 - 51737693
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||  ||||||||| |||| ||       |    
T  51738043 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaa--aagacttttagcaacttaaaaaaag 51737946  T
Q  111 tcttatggtattcaattaagactctttgtcatttt-aaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    |||| ||||||||||| |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||    
T  51737945 tcttgtggtattcaatcaagactctttatcattttaaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 51737846  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  51737845 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgttgtgtaattttaacaagaaaaagtctttcataaaaa 51737746  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||| ||  ||||||||||| |||||  ||||||||||| ||||| ||| |||||    
T  51737745 gataagtattcttgagatt-gtttttctttaaaagttattatctctttcttctc 51737693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 116 - 337
Target Start/End: Original strand, 37454854 - 37455075
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||       ||||||||||| |||| |||||    
T  37454854 tggtattcaatcaagattctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcat 37454953  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    |||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37454954 tcaaatttcgaatgattgtttaataaattgaattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaagatgagatttcttgag 37455053  T
Q  316 attggttttattttaaaagtta 337  Q
    |||| |||| ||||||||||||    
T  37455054 attgtttttcttttaaaagtta 37455075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 110 - 354
Target Start/End: Complemental strand, 34484249 - 34483995
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||| ||||    
T  34484249 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaa 34484150  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34484149 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaa 34484050  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||| ||||||    
T  34484049 gatgagatttcttgagattgtttttgttttaaaagttactatctctttcttctca 34483995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 116 - 343
Target Start/End: Original strand, 39038033 - 39038260
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||||||  ||| |||||    
T  39038033 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcactttaaaaaagtcttgtggtatccaaaatcat 39038132  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    ||||||||||||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  39038133 tcaaatttcgaagaattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgaa 39038232  T
Q  316 attggttttattttaaaagttactatct 343  Q
    |||| |||| ||||||||||||||||||    
T  39038233 attgtttttcttttaaaagttactatct 39038260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 32580064 - 32580415
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  ||||||||| |  ||| ||||||| |||||||||||  ||||||||||||| ||||| ||||||            
T  32580064 gggatgtattggattaggattctatgagattttaaaaaaaattt-aattatgaaaaagtcttgtaatattcaatcaagattttttacaatttaaaaaaaa 32580162  T
Q  111 tc--ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
        || |||||||| || ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||       ||||||||||| |||    
T  32580163 aaatttgtggtattcgatcaaggctctttgtcattttaaaaaagtcttgaggtattcaat-aagacttttcatcatttaaaaaaagtcttgtggtattca 32580261  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggattttgt----------gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | |||||||||||||||||||||||||| |||||||||||||||           |||||||||||||||||||||||||||||||||||||||||||||    
T  32580262 aaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgagggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 32580361  T
Q  299 agatgagatttcttgagattggttttattttaaaagttactatctttttattct 352  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||    
T  32580362 agatgagatttcttgagattgtttttattttaaaaattactatctttttcttct 32580415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 110 - 353
Target Start/End: Original strand, 17946275 - 17946528
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| ||| || ||||    
T  17946275 gtcttgtggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtgatattcaa 17946374  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||| ||||||||||| ||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17946375 aatcattcaaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 17946474  T
Q  300 gatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  17946475 gatgagatttcttgagattgtttttcttttaaaagttactatctatttcttctc 17946528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 64 - 343
Target Start/End: Original strand, 18749553 - 18749842
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||||  ||||       |||||  |||||||||| || ||| ||  ||| |||||||||||||||||||||    
T  18749553 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcactttaaaaaagtcttgaggtat 18749652  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgga----------ttttgt 253  Q
    ||||| || ||||||||||| ||       ||||||||||| |||| |||||||||||||||||||||||||| ||||||||||          ||||||    
T  18749653 tcaataaaaacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgt 18749752  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  18749753 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactatct 18749842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 11 - 308
Target Start/End: Original strand, 20832883 - 20833187
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||| |||||| ||||||||||||||||||| |||||| || ||       |    
T  20832883 gggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaagattttttgtaacttaaaa---g 20832979  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||  ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||| ||||     
T  20832980 tctcgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagaattttcatcacttaaaaaaagtcttgtggtattcaaa 20833079  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttg----------tagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||  |||||||||||| |||||||||||||||  ||||||||          ||||||||||||||||||||||||| ||||||||||||    
T  20833080 atcattcaaattcggaaggattgtttaataaattggattttgatggattttgtgagatttattagtgtaattttaacaagaaaaagtatttcatgaaaag 20833179  T
Q  301 atgagatt 308  Q
    || |||||    
T  20833180 ataagatt 20833187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 116 - 343
Target Start/End: Original strand, 52810371 - 52810608
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||       ||||||||||| |||| |||||    
T  52810371 tggtattcaatcaagactctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaatcat 52810470  T
Q  216 tcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    |||||||| ||| |||||||| ||||||          |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  52810471 tcaaattttgaatgattgtttaataaattgaattttgatggattttgtgggattttgtagcgtaattttaacaagaaaaaatctttcatgaaaagatgag 52810570  T
Q  306 atttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||| |||| |||||||||  |||||||    
T  52810571 atttcttgagattgtttttcttttaaaagaaactatct 52810608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 15 - 183
Target Start/End: Original strand, 18749462 - 18749630
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |||||    
T  18749462 tgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtctt 18749561  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
     ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  18749562 gtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatca 18749630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 64 - 336
Target Start/End: Original strand, 44276330 - 44276598
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    ||||||| ||||||||||||| |||||| |||| |||||       ||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  44276330 aaaagtcatgtggtattcaattaagactctttgtaatttaaaaaaagtcttgtggtattcaattaaaactctttgtcattttaaaaaagtcttgaggtat 44276429  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    |||||||||| ||||||||| ||       ||||  ||||| |||| ||||||||||||    |||||||||| |||||||||||||||||||||||| |    
T  44276430 tcaatcaagatttttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaatt----aggattgtttaataaattggattttgtgggattttct 44276525  T
Q  264 agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagtt 336  Q
    |||| ||||||||||||||||| ||||||||||| | ||||||||| ||| ||||  |||| |||||||||||    
T  44276526 agtgaaattttaacaagaaaaaatctttcatgaagacatgagattttttgggattatttttcttttaaaagtt 44276598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 17 - 312
Target Start/End: Original strand, 19253721 - 19254026
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| |    
T  19253721 tattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 19253820  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||    
T  19253821 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 19253920  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||    
T  19253921 caaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaga 19254020  T
Q  307 tttctt 312  Q
    ||||||    
T  19254021 tttctt 19254026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 22 - 333
Target Start/End: Complemental strand, 6035359 - 6035039
Alignment:
Q  22 gattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtat 121  Q
    ||||| |||| ||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||  ||||||||| ||       || | |||||||    
T  6035359 gattaagattttatgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagtttttttgcaacttaaataaagt-tcatggtat 6035261  T
Q  122 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaat 221  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||       |||| ||| || |||| |||||||||||    
T  6035260 tcaatcaagagtctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtctcgtgatattcaaaatcattcaaat 6035161  T
Q  222 ttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 311  Q
    ||||||| | ||||| ||||||          |||||||||||||||||| ||||  ||||||| || ||||||||||||||| |||| |||||||||||    
T  6035160 ttcgaagcaatgtttaataaattagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcataaaaacatgagatttct 6035061  T
Q  312 tgagattggttttattttaaaa 333  Q
    | |||||| |||| ||||||||    
T  6035060 taagattgtttttcttttaaaa 6035039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 20498102 - 20498408
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||||||||||| | ||| |||||||||||||||||||||||||||| ||| ||||||       || ||    
T  20498102 tgtattggatcatgattctaagggattttaaaagacttttta-tcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtttt 20498200  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  20498201 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 20498300  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  20498301 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 20498400  T
Q  305 gatttctt 312  Q
    ||||||||    
T  20498401 gatttctt 20498408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 6975643 - 6975922
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||||||||||||||| |||||||||| | |||||||| ||| |||||||||||| ||||||   |||||| |||| || ||       ||||| |    
T  6975643 tattggattaggattctatgaaattttaaaatattttttaatgatgaaaaagtcttgtgatattcagcgaagactctttgtaacttaaaaaaagtcttgt 6975742  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    |||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||       ||||||||||| |||| ||||||    
T  6975743 ggtattcaatcaagactctttgttattttaaaa-agtcttgaggtattcaatcaagacttttcatcattt--aaaaagtcttgtggtattcaaaatcatt 6975839  T
Q  217 caaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    |||||||||||| ||| |||  ||||||||| ||||||||||||| ||||  ||||| | || |||| |||||||||||||||    
T  6975840 caaatttcgaagaattatttactaaattggaatttgtgggattttctagtaaaatttgagcatgaaacagtctttcatgaaaa 6975922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 17 - 324
Target Start/End: Complemental strand, 37820789 - 37820472
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| |    
T  37820789 tattggataatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgt 37820690  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| |||||||||||| |||||| ||||| ||||||||||||||| | || |||| ||       |||| |||||| |||| ||||||    
T  37820689 gttattcaatcaagattctttgtcatttaaaaaaattcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 37820590  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||||||||||||||| ||||||          ||||||||||||||||||  |||| ||||||| || ||||||||||||||| |||| ||||||    
T  37820589 caaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttccagtgaaattttagcatgaaaaagtctttcataaaaacatgaga 37820490  T
Q  307 tttcttgagattggtttt 324  Q
    |||||| |||||| ||||    
T  37820489 tttcttaagattgttttt 37820472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 996399 - 996093
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||| ||       |||||    
T  996399 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaa-ttaaaaaaagtctt 996301  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| ||||| |||||| |||||||||||| ||||||||||||||| | || |||| ||       |||| |||||| |||| ||||    
T  996300 gtgttattcaatcaagattctttatcatttcaaaaaagtcttgtggtattcaatcaagattcttaatcacttaaaaaaagtctagtggtattcaaaatca 996201  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  996200 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 996101  T
Q  305 gatttctt 312  Q
    ||||||||    
T  996100 gatttctt 996093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 10139460 - 10139153
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| || ||||||||| ||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  10139460 tgtattgaatcatgattctaagggattttaaaatacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 10139361  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| || || |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  10139360 gtgttattcaatcaagattccttatcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 10139261  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  10139260 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 10139161  T
Q  305 gatttctt 312  Q
    ||||||||    
T  10139160 gatttctt 10139153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 11 - 164
Target Start/End: Complemental strand, 27240561 - 27240408
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  27240561 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 27240462  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtatt 164  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  27240461 tcttgtggtattcaatcaagactctttgtcattttaaaaaagttttgaggtatt 27240408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 3206510 - 3206212
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  3206510 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 3206411  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     ||||||||||| |||| |||||         ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  3206410 gtggtattcaatcaagattcttt---------aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 3206320  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| ||||    
T  3206319 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatga 3206220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 28 - 309
Target Start/End: Original strand, 35337640 - 35337930
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaatt 127  Q
    ||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || ||||||||     
T  35337640 gattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatc 35337739  T
Q  128 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaa 227  Q
    |||| || |||||||||||||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |  ||||||||||||||    
T  35337740 aagattccttgtcattttaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaaaaattcaaatttcgaa 35337839  T
Q  228 ggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
    ||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| |||||||||    
T  35337840 ggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagt-tttcatgaaaacatgagattt 35337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 11 - 312
Target Start/End: Original strand, 6589451 - 6589763
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||||||||||||| | ||||||| || | |||||||||||||||  || ||| ||||||||||||||||||||| |||||| |||  |||||           
T  6589451 gggatgtattggatcatgattctaagggactttaaaagactttttttatcatgaaaaagtcttgtggtattcaattaagactctttctaatttaaaaaaa 6589550  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| || | || ||||||||| |||||||||||| ||||||||||||||||| || |||||||       |||| |||||| ||||    
T  6589551 gtcttgtgttattcaatcaatattccttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaa 6589650  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||| ||| ||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  6589651 aatcattcaaatttcgaagaattatttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 6589750  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  6589751 catgagatttctt 6589763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 206 - 353
Target Start/End: Complemental strand, 39842607 - 39842460
Alignment:
Q  206 tcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    |||| |||||||||||||||||| ||||||| ||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  39842607 tcaaaatcattcaaatttcgaagaattgtttaataaattagattttgacggattttgtaatgtaattttaacaagaaaaagtctttcatgaaaagatgag 39842508  T
Q  306 atttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||| ||||| |||| ||||||||||||| |||| ||| |||||    
T  39842507 atttcttgggattgtttttcttttaaaagttaccatctctttcttctc 39842460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 39 - 324
Target Start/End: Complemental strand, 44762327 - 44762032
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| ||||||    
T  44762327 attttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaagattctttg 44762228  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| ||||||||| ||  |||||||||||||||| || |||| ||       |||| |||||| | || || |||||| |||||||||||||||| |    
T  44762227 tcatttaaaaaaagtcatgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtatttaaaattattcaagtttcgaaggattgtttaa 44762128  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    |||||          |||||||||||||||||| ||||| ||||||| || |||||||||||| ||||||| |||||||||||| |||||| ||||    
T  44762127 taaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtcttttatgaaaacatgagatttcttaagattgttttt 44762032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 33808116 - 33807805
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggt---attcaatcaagactttttgcaatttnnnnnnngt 111  Q
    ||||||| || | ||||||| || ||||||||||||||||| || ||  ||||||||||||||   |||||||||| | | ||| ||||||       ||    
T  33808116 tgtattgaatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtggtattcaatcaaaattcttttcaatttaaaaaaagt 33808017  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaag 210  Q
    ||| || ||||||||||||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||| |||||| ||||     
T  33808016 cttgtgttattcaattaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaagtctagtggtattcaaa 33807917  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||     
T  33807916 atcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaac 33807817  T
Q  301 atgagatttctt 312  Q
    ||||||||||||    
T  33807816 atgagatttctt 33807805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 11 - 183
Target Start/End: Original strand, 12103520 - 12103689
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||| |||||| |  |||||||||||||||||||||||| || |||||||| |||||||||||| ||| |||| |||||       |    
T  12103520 gggatgtattggattagaattctaag--attttaaaagactttttaattatgaaatagtcttgttgtattcaatcaatactctttgtaatttaaaaaa-g 12103616  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
    |||  |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12103617 tctcgtggtattcaattaagattctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatca 12103689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 127 - 336
Target Start/End: Complemental strand, 15493062 - 15492850
Alignment:
Q  127 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcga 226  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       ||||  ||||| |||| |||||||||||||  |    
T  15493062 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaat-gtctcatggtattcaaaatcattcaaattttta 15492964  T
Q  227 a----ggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtt 322  Q
    |    | ||| ||| |||||||||||||||| |||| || ||||| ||||||||||||||||| |||||||||||   || |||||||||||||||| ||    
T  15492963 attaagaattatttaataaattggattttgtaggatattctagtgaaattttaacaagaaaaaatctttcatgaagtcataagatttcttgagattgttt 15492864  T
Q  323 ttattttaaaagtt 336  Q
    ||||||||||||||    
T  15492863 ttattttaaaagtt 15492850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 12 - 263
Target Start/End: Original strand, 29029895 - 29030145
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    ||||||||||||| | ||||||| || ||||||||||||||||  || ||| |||| | |||||||||||||||||||||  ||  ||||        ||    
T  29029895 ggatgtattggatcatgattctaagggattttaaaagacttttatatcatgaaaaaatattgtggtattcaatcaagactcattctaattaagaaaaagt 29029994  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    ||| || |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||||||||| |||| |    
T  29029995 cttgtgttattcaattaagactctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcactt-aaaaaagtcttgtggtattcaaaa 29030093  T
Q  212 tcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    |||||||||||| |||||||||||| ||||||  |||||||  |||||||||    
T  29030094 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgt 29030145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 15 - 308
Target Start/End: Original strand, 40246736 - 40247039
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| |  ||||||||| ||||||| ||  || |||||||||||||||||||||||||||| |||    |||        ||||    
T  40246736 tgtattggatcatgattctaagagattttaaaaaacttttttatcgtgaaaaagtcttgtggtattcaatcaagactctttctggtttaaaaaaaatctt 40246835  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||| ||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  40246836 gtgttattcaatcaagattctttgtcatttaaaaaaagttttgtggtattcaatcaagactattaatcagttaaaaaaagtctagtggtattcaaaatca 40246935  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||||    
T  40246936 ttcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatga 40247035  T
Q  305 gatt 308  Q
    ||||    
T  40247036 gatt 40247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 39842747 - 39842659
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa 99  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||    
T  39842747 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaa 39842659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 10728917 - 10728832
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  10728917 gggatgtattggattagcattctatggaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttg 10728832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 29449150 - 29448865
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn--gtcttatggtattcaattaagactctt 136  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||||||| ||| ||| ||| ||         ||||| || |||||||| |||| || |    
T  29449150 attttaaaagacttttttattatgaaaaaatcttgtggtattcaatcaatactctttccaaatttaaaaaaaagtcttgtgttattcaatcaagattcct 29449051  T
Q  137 tgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgttt 236  Q
    ||||||||  ||||||||||| | ||||||||||||||| |  |||| ||       |||| |||||| |||| ||||||||||||||||||||||||||    
T  29449050 tgtcatttacaaaaagtcttgtgatattcaatcaagactctcaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgttt 29448951  T
Q  237 gataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
     ||||||          |||||||||||||||||| ||||  ||||||| ||  ||||||||||||||||||| ||||||||||||    
T  29448950 aataaatcagattttgatggattttgtgggattttctagtaaaattttagcataaaaaagtctttcatgaaaacatgagatttctt 29448865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 3999864 - 3999652
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| |||||| ||||    
T  3999864 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaa 3999765  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| |||||||  | ||||||||||||||| ||||    
T  3999764 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagaatgaaaaagtctttcataaaaa 3999665  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  3999664 catgagatttctt 3999652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 116 - 312
Target Start/End: Original strand, 27899337 - 27899533
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    |||||||||||| ||| |||||   | || ||||||||| |  ||||||||||||||||| ||  ||||||       |||| |||||| |||| |||||    
T  27899337 tggtattcaattcagattctttccaacttaaaaaaagtcatatggtattcaatcaagactctttgtcatttaaaaaaagtctggtggtattcaaaatcat 27899436  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||||||||||||||||||||| ||||||  |||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||    
T  27899437 tcaaatttcgaaggattgtttaataaatcagattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 27899533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 71 - 324
Target Start/End: Original strand, 54625540 - 54625803
Alignment:
Q  71 ttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatca 170  Q
    |||| |||||||||||||||| ||| ||||||       ||||| || |||||||| || | || ||||||||| |||||| |||||  |||||||||||    
T  54625540 ttgtagtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattcgttgtcatttaaaaaaaatcttgttgtattcaatca 54625639  T
Q  171 agacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattt 260  Q
    ||||| || |||| ||       |||| |||||| |||| || ||||||||||||||||||||||| ||||||          |||||||||||||||||    
T  54625640 agactcttaatcacttaaaaaaagtctagtggtattcaaaattattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattt 54625739  T
Q  261 tgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    | ||||| ||||||| || |||||||| ||||||||||| |||||||||||| |||||| ||||    
T  54625740 tctagtgaaattttagcatgaaaaagtttttcatgaaaacatgagatttcttaagattgatttt 54625803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 255 - 332
Target Start/End: Original strand, 45862983 - 45863060
Alignment:
Q  255 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaa 332  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||    
T  45862983 ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaa 45863060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 11 - 261
Target Start/End: Complemental strand, 1440269 - 1440020
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||| | | ||||||| |  ||||||||| |||||||| | ||| |||||||||||||||||||||||||||| ||| ||||||       |    
T  1440269 gggatgtattgggtcatgattctaagagattttaaaatacttttta-tcatgaaaaagtcttgtggtattcaatcaagactattttcaatttaaaaaa-g 1440172  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    |||| || |||||||| |||| |||||||||||| |||||| || ||| ||||||||||||||||| || |||| ||       |||| |||||| ||||    
T  1440171 tcttgtgttattcaatcaagattctttgtcatttaaaaaaaagttttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 1440072  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggatttt 261  Q
     |||||||||||||| ||||||||||| ||||||  |||||||  |||||||    
T  1440071 aatcattcaaatttccaaggattgtttaataaatcagattttgatggatttt 1440020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 52810311 - 52810464
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||| |||||| ||||||||||||||||||||| ||||  ||||       || |    
T  52810311 atgtattggattaggattctatgggattttaaaagactttttaactatgaaaaagtgttgtggtattcaatcaagactctttgtcattttaaaaaagttt 52810410  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    |  |||||||||| |||||| ||  |||||| |||||||||||| |||||||||    
T  52810411 tgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 52810464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 252
Target Start/End: Complemental strand, 539586 - 539481
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgg 246  Q
    ||||||||||||||||||||||||||| ||||||||||||       ||||||||||| |||| |||||||||||||||||||||| ||| |||||||||    
T  539586 aaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattatttaataaattgg 539487  T
Q  247 attttg 252  Q
    ||||||    
T  539486 attttg 539481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 308
Target Start/End: Original strand, 25418260 - 25418561
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||| | ||||||| |  ||||||||| | ||||| || ||| |||  | ||||||||||||||||| ||| ||| || |||       ||||| |    
T  25418260 tattggatcatgattctaagagattttaaaaaatttttttatcatgaaaattttttgtggtattcaatcaaaactctttccattttaaaaaaagtcttgt 25418359  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    | |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||        ||| | |||| |||| ||||||    
T  25418360 gttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttacaaaaaatctagcggtattcaaaatcatt 25418459  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    |||||||  ||||||||||| ||||||          |||||||||||||||||| ||||| ||||||  || |||||||| ||||||||||| ||||||    
T  25418460 caaatttgaaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtatttcatgaaaacatgaga 25418559  T
Q  307 tt 308  Q
    ||    
T  25418560 tt 25418561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 118 - 312
Target Start/End: Complemental strand, 33996752 - 33996548
Alignment:
Q  118 gtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattc 217  Q
    ||||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||  |||||| |||| |||||||    
T  33996752 gtattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatccagtggtattcaaaatcattc 33996653  T
Q  218 aaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 307  Q
    ||||||||||||||||||| ||||||          ||||||||| |||||||| ||||| ||||||| || |||||||||||| || |||| |||||||    
T  33996652 aaatttcgaaggattgtttaataaatcagattttgatggattttgagggattttctagtgaaattttagcatgaaaaagtcttttataaaaacatgagat 33996553  T
Q  308 ttctt 312  Q
    |||||    
T  33996552 ttctt 33996548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 10 - 252
Target Start/End: Original strand, 52114417 - 52114658
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||| |||| ||||| | ||||||| |||||||||||||| ||||| || |||  |||||||||||||||||||||||  || ||| ||||||           
T  52114417 aggggtgtactggatcatgattctaaggaattttaaaagatttttttatcatgataaagtcttgtggtattcaatcaa--ctattttcaatttaaaaaaa 52114514  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactca 208  Q
     |||| || |||||||  |||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||        |||| |||||| |||    
T  52114515 atcttgtgttattcaaccaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaaagtctagtggtattca 52114614  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggattttg 252  Q
    | || |||||||||||| |||||||||| ||||||  |||||||    
T  52114615 aaataattcaaatttcgcaggattgtttaataaatcagattttg 52114658  T

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Target: chr3; HSP #57
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 17946219 - 17946296
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    ||||||||||||||||||||||||| | |||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  17946219 gggatgtattggattaggattctataggattt-aaaagactttttaattatgaaaaagtcttgtggtattcaatcaaga 17946296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 39 - 304
Target Start/End: Complemental strand, 51699769 - 51699495
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||| ||||| || | | |||| | ||||||||||||||||||||| ||| ||||||       ||||| |  |||||||| |||| ||||||    
T  51699769 attttaaaagatttttttatcaagaaaaaattttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtattattcaatcaagattctttg 51699670  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||| ||||| ||||||||||||||||| || |||| ||        ||| |||||| |||| ||||||||||||||||||||||| || |    
T  51699669 tcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaa-tctagtggtattcaaaatcattcaaatttcgaaggattggttaa 51699571  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||          || ||||||||||||||| ||||| ||||||| || |||||| |||||| |||||| ||||    
T  51699570 taaataagattttgatgaattttgtgggattttctagtgaaattttagcatgaaaaaatctttcgtgaaaacatga 51699495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 261
Target Start/End: Original strand, 55235079 - 55235322
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||||||| |||| | | ||| ||||||||||||||  ||| ||| ||       |||||    
T  55235079 tgtagtggattaagattctaaggaattttaaaagactttttaattatgaaaaaatatagtgttattcaatcaagaccctttacaactt-aaaaaagtctt 55235177  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     |||| || ||| |||| || |||||||||||||||||||  ||||||||||||||| ||| ||||||| ||       ||||  || || |||| ||||    
T  55235178 gtggtctttaatcaagattc-ttgtcattttaaaaaagtcacgaggtattcaatcaaaactcttcatcaatt-aaaaaagtctcatgatattcaaaatca 55235275  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggatttt 261  Q
    ||||||||||||| |||||||| ||||||||| |||||  |||||||    
T  55235276 ttcaaatttcgaaagattgtttaataaattggtttttgatggatttt 55235322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 15494049 - 15493958
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    ||||||||||||||||  |||||| || |||||||||||||||||||||||| |||| |||||| ||||| |||||||||| ||||||||||    
T  15494049 gggatgtattggattataattctaagggattttaaaagactttttaattatgaaaaaatcttgtagtatttaatcaagactctttgcaattt 15493958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 121 - 309
Target Start/End: Complemental strand, 53929336 - 53929138
Alignment:
Q  121 ttcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaa 220  Q
    |||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||| |||    
T  53929336 ttcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatttaaa 53929237  T
Q  221 tttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
    | ||||| |||||||| ||||||          |||||||||| ||||||| ||||| ||||||| || |||||| ||||| ||||||| |||||||||    
T  53929236 tatcgaacgattgtttaataaataagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaaatctttaatgaaaacatgagattt 53929138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 539700 - 539608
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    ||||||||||||||||||| ||||| |  ||||||||||| |||||||||||| ||||| |||||||||||||||||| ||| |||| |||||    
T  539700 agggatgtattggattagggttctaagagattttaaaagattttttaattatgaaaaagccttgtggtattcaatcaaaactctttgtaattt 539608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 244 - 312
Target Start/End: Complemental strand, 6131308 - 6131240
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  6131308 tggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 6131240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 12734154 - 12734078
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagact 91  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| ||||||||||||||||||||||||||||    
T  12734154 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagact 12734078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 312
Target Start/End: Original strand, 5825047 - 5825261
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactc 207  Q
    ||||| ||||||| ||| ||||||||||||||||| ||||||   ||  | ||||||||||||| ||||||  ||||||       || |  ||||| ||    
T  5825047 gtcttgtggtatttaataaagactctttgtcatttaaaaaaacaattatgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattc 5825146  T
Q  208 aagatcattcaaatttcgaaggattgtttgataaattggatt----------ttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaa 297  Q
    || ||||||||||||| |||||||||||| ||||||||||||          |||||||||||| ||||| |||| || || ||||||| ||||||||||    
T  5825147 aaaatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtgggattttttagtgaaattctagcatgaaaaaggctttcatgaa 5825246  T
Q  298 aagatgagatttctt 312  Q
    || ||||||||||||    
T  5825247 aacatgagatttctt 5825261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 89
Target Start/End: Original strand, 38772269 - 38772343
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||| ||||||||||||  |  |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  38772269 tgtattagattaggattctgagagattttaaaagactttttatttatgaaaaagtcttgtggtattcaatcaaga 38772343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 199 - 287
Target Start/End: Original strand, 52080003 - 52080091
Alignment:
Q  199 gtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagt 287  Q
    |||||| |||| ||||||||||||| |||||||||||| ||||||  |||||||||||||||| || || ||||||| || ||||||||    
T  52080003 gtggtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgtgggattttctaatgaaattttagcatgaaaaagt 52080091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 10225729 - 10225671
Alignment:
Q  36 ggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||    
T  10225729 ggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 274
Target Start/End: Complemental strand, 23535946 - 23535866
Alignment:
Q  194 gtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaatttt 274  Q
    ||||||||||| |||| ||||||||||||| ||||||| |||| || |||| ||||| |||||||||| ||||| ||||||    
T  23535946 gtcttgtggtattcaaaatcattcaaatttagaaggatcgtttaattaattagatttagtgggattttctagtgaaatttt 23535866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 10105071 - 10105016
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||    
T  10105071 attttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttt 10105016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 10216218 - 10216163
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| ||||| |||||  |||||||||||||||||||||||||||||||    
T  10216218 attttaaaagatttttttattataaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 10225847 - 10225792
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||    
T  10225847 attttaaaagacttttttattataaaaaagtcttgtgctattcaatcaagactttt 10225792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 167
Target Start/End: Original strand, 27899302 - 27899430
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| |||||| ||   | ||||||||||||||  ||| | ||| ||| ||       ||| ||||||||||||| |||||||||||    
T  27899302 attttaaaagacttttttattatgaaatttttttgtggtattcaattcagattctttccaacttaaaaaaagtcatatggtattcaatcaagactctttg 27899401  T
Q  139 tcattttaaaaaagtcttgaggtattcaa 167  Q
    |||||| |||||||||| | |||||||||    
T  27899402 tcatttaaaaaaagtctggtggtattcaa 27899430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 10104953 - 10104895
Alignment:
Q  36 ggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||||||| ||||||    
T  10104953 ggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 10104895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 10216100 - 10216042
Alignment:
Q  36 ggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||||||| ||||||    
T  10216100 ggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 10216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 284
Target Start/End: Original strand, 22057655 - 22057933
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| || |||||||||||||||||  || ||| |||||| |||||||||||||||     | ||| ||||||       ||||    
T  22057655 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtattgtggtattcaatcgt---tctttccaatttaaaaaaagtct 22057751  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagt-cttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    | || |||||||| |||| |||||||||||| ||||||   |||| ||||||| ||||||||| || |||| ||        ||| |||||| | || ||    
T  22057752 tgtgttattcaatcaagattctttgtcatttaaaaaaaaaacttgtggtattccatcaagactcttgatcacttaaaaaaaatctagtggtatttaaaat 22057851  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaa 284  Q
    |||||||||||||| ||||||||| ||||||          |||||||||||||||||| ||||| |||||||||| |||||    
T  22057852 cattcaaatttcgatggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaacatgaaaa 22057933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 96
Target Start/End: Original strand, 2024123 - 2024180
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||| | ||||| |||||| |||||||||||||||||||||||||||| ||||    
T  2024123 attttaaaatatttttttattatgaaaaagtcttgtggtattcaatcaagactatttg 2024180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 6131381 - 6131325
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    |||||||| ||||||| ||||||||| |||||||| ||| |||||||||||||||||    
T  6131381 tattcaatcaagactcattgtcatttaaaaaaagttttgtggtattcaatcaagact 6131325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 28146316 - 28146261
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| || ||| ||||||| || ||||||||||||||||||||    
T  28146316 attttaaaagacttttttatgatgaaaaagtcatggggtattcaatcaagactttt 28146261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 45215458 - 45215403
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||| ||  |||| ||||||||||||||||||| ||||||    
T  45215458 attttaaaagactttttaataataaaaaaatcttgtggtattcaatcaaaactttt 45215403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 167
Target Start/End: Complemental strand, 34484253 - 34484150
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||||  ||||       |||||  |||||||||| |||||| ||  |||||| |||||||| ||| |||||    
T  34484253 aaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtat 34484154  T
Q  164 tcaa 167  Q
    ||||    
T  34484153 tcaa 34484150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 27240504 - 27240439
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| ||||||||||| |||||| ||||  | || |||||||||||| |||||||||||||||||    
T  27240504 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagact 27240439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 27593198 - 27593234
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  27593198 ttttaaaaaagtctttaggtattcaatcaagactttt 27593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 36786017 - 36786053
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  36786017 ttttaaaaaagtctttaggtattcaatcaagactttt 36786053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 38629858 - 38629802
Alignment:
Q  38 aattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  38629858 aattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 38629802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 11 - 71
Target Start/End: Complemental strand, 50901259 - 50901199
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtct 71  Q
    ||||||||||||||||  ||| || || |||||||||||||||||||||||  ||||||||    
T  50901259 gggatgtattggattaaaattttaagggattttaaaagactttttaattataaaaaagtct 50901199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 19552229 - 19552150
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||  |||| ||  | ||||||||||| ||||| ||| |  |||||||||||||||||||||||||| ||||    
T  19552229 tgtattggattgagattttaaaggattttaaaagatttttttattttataaaagtcttgtggtattcaatcaagattttt 19552150  T

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Target: chr3; HSP #88
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 26555841 - 26555896
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  26555841 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 26555896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 30588866 - 30588921
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  30588866 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 30588921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 269 - 312
Target Start/End: Complemental strand, 33807730 - 33807687
Alignment:
Q  269 aattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||||||| || |||||||||||||||||||| ||||||||||||    
T  33807730 aattttagcatgaaaaagtctttcatgaaaacatgagatttctt 33807687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 36055064 - 36055009
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  36055064 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 36055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 46749278 - 46749333
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| ||||| |||||  ||||||||||||||| | |||||||||||||    
T  46749278 attttaaaagatttttttattataaaaaagtcttgtggtaatgaatcaagactttt 46749333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 50900504 - 50900449
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  50900504 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 50900449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 2024152 - 2024217
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| ||||||||||| |||||| |||||||||| |||| | ||||| | |||| ||||||||||    
T  2024152 gtcttgtggtattcaatcaagactatttgtcatttaaaaataatcttgtgatatttaatcaagact 2024217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 10216196 - 10216163
Alignment:
Q  145 taaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||| ||||||||||||||||||||    
T  10216196 taaaaaagtcttgtggtattcaatcaagactttt 10216163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 10225704 - 10225671
Alignment:
Q  145 taaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||| ||||||||||||||||||||    
T  10225704 taaaaaagtcttgtggtattcaatcaagactttt 10225671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 256 - 297
Target Start/End: Original strand, 12103733 - 12103774
Alignment:
Q  256 gattttgtagtgtaattttaacaagaaaaagtctttcatgaa 297  Q
    |||||| ||||| |||||||||||||| ||||||||||||||    
T  12103733 gattttctagtgaaattttaacaagaataagtctttcatgaa 12103774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 13662573 - 13662625
Alignment:
Q  37 gaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||||||||||||  || |  |||||||| |||||||||||||||||    
T  13662573 gaattttaaaagacttttttgttttacaaaagtctcgtggtattcaatcaaga 13662625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 37 - 89
Target Start/End: Complemental strand, 24574978 - 24574926
Alignment:
Q  37 gaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||||||||||||| ||||  |||| ||||| | |||||||||||||    
T  24574978 gaattttaaaagactttttagttataaaaaaatcttgagatattcaatcaaga 24574926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 34292566 - 34292506
Alignment:
Q  34 atggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||| |||||||  ||  |||| |||||| |||||||||||||| ||||    
T  34292566 atggaattttaaaagattttttaaaaataaaaaaatcttgtagtattcaatcaagattttt 34292506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 39338335 - 39338299
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| ||||||||||| |||||||||    
T  39338335 ttttaaaaaagtctttaggtattcaataaagactttt 39338299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 233; Significance: 1e-128; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 28342230 - 28342583
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||       |    
T  28342230 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagattttttgcaatttaaaaaaag 28342329  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||       ||||||||||| ||||     
T  28342330 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcgagacttttcatcatttaaaaaaagtcttgtggtattcaaa 28342429  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28342430 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 28342529  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  28342530 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 28342583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 11 - 352
Target Start/End: Original strand, 23101181 - 23101532
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||       |    
T  23101181 gggatgtatcggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaatttaaaaaaag 23101280  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  23101281 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 23101380  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23101381 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 23101480  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattct 352  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  23101481 atgagatttcttgagattgtttttattttaaaagttactatctttttcttct 23101532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 29615081 - 29614728
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  29615081 gggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 29614982  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||| || ||||     
T  29614981 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtgatattcaaa 29614882  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29614881 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 29614782  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||| ||||||    
T  29614781 atgagatttcttgagattatttttattttaaaagttactatctttttcttctca 29614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 12 - 345
Target Start/End: Original strand, 39783983 - 39784326
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    ||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||       ||    
T  39783983 ggatgtattggattgagattctatgggattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaatttaaaaaaagt 39784082  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
    ||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| |||| |    
T  39784083 cttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaaa 39784182  T
Q  212 tcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    ||||| ||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784183 tcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 39784282  T
Q  302 tgagatttcttgagattggttttattttaaaagttactatcttt 345  Q
    |||||||||||||||||| |||||||||||||||||||||||||    
T  39784283 tgagatttcttgagattgtttttattttaaaagttactatcttt 39784326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 46405748 - 46405406
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||            
T  46405748 gggatatattggattaggattctatggaattttaaaagactttttaattatgaaaaagtcatgtggtattcaatcaagactttttgcaacttaaaaaaaa 46405649  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    ||||  |||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  46405648 tcttgcggtattcaatcaagactctttgtcgttttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 46405549  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||| || |||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||| ||| || |||||||||||||||    
T  46405548 atcattcaaatttcaaatgattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtatttaataaaaagatgagatttc 46405449  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||| |||| |||||||||||||||||| ||| |||||    
T  46405448 ttgagattgtttttcttttaaaagttactatctcttttttctc 46405406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 37327810 - 37328142
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||| |||||| ||||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  37327810 gggatgtataggattaagattcaatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 37327909  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||       ||||||||||| ||||     
T  37327910 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcattacttaaaaaaagtcttgtggtattcaaa 37328009  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||| ||||||||||| |||||||| ||||||  |||||||||||| |||||||||||| |||||||||||||||||||||| ||||||     
T  37328010 atcattcaaatttcaaaggattgtttaataaattgaattttgatggattttgtagtataattttaacaaaaaaaagtctttcatgaaaagataagatttt 37328109  T
Q  311 ttgagattggttttattttaaaagttactatct 343  Q
    ||||||||| |||| ||||||||||||||||||    
T  37328110 ttgagattgtttttcttttaaaagttactatct 37328142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 7 - 353
Target Start/End: Complemental strand, 9882557 - 9882202
Alignment:
Q  7 aagagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnn 106  Q
    ||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||        
T  9882557 aagagggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaa 9882458  T
Q  107 nnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtact 206  Q
       || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |    
T  9882457 aaagttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtatt 9882358  T
Q  207 caagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 296  Q
    ||| ||||||||||||||||| |||||||| ||||||          ||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  9882357 caaaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaagaagaaaaagtctttcat-a 9882259  T
Q  297 aaagatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||| ||||||||||||||||||| |||| |||||||||||| ||||| ||| |||||    
T  9882258 aaaaatgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 9882202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 39 - 352
Target Start/End: Complemental strand, 40460996 - 40460683
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    |||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||       ||||| || ||||||||||||||||||||    
T  40460996 attttaaaagactttttaattatgaaaaagttttgtggtatttaatcaagactttttgcaatttaaaaaatgtcttgtgatattcaattaagactctttg 40460897  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||| |||| ||||||||||||||||| |||||||| |    
T  40460896 tcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaatgattgtttaa 40460797  T
Q  239 taaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttac 338  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |||| |||||||||||||    
T  40460796 taaattggattttgatggattttgtagtgtaattttaacaagaaaaaatctttcatgaaaatatgagatttcttgagattgtttttcttttaaaagttac 40460697  T
Q  339 tatctttttattct 352  Q
    ||||| ||| ||||    
T  40460696 tatctctttgttct 40460683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 10 - 353
Target Start/End: Original strand, 39027979 - 39028322
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||           
T  39027979 agggatgtattggattaggattttatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaa 39028078  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
     |||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||       |||||||| || ||||    
T  39028079 atcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtgttattcaa 39028178  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||| |||||||| |||| |||||||| |||||||||||||||  |||||||||||||||| |||||||||||||||| |||||||||||   |||||||    
T  39028179 aatcgttcaaattacgaaagattgtttaataaattggattttgatggattttgtagtgtaactttaacaagaaaaagtttttcatgaaaaacagagattt 39028278  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||| |||| |||||||||||||||||| ||| |||||    
T  39028279 cttgagattgtttttcttttaaaagttactatctctttcttctc 39028322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 18838272 - 18838624
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||            
T  18838272 gggatgtattggattaggattctatgggattataaaagactttttaattatgaaaatgtcttgtggtattcaatcaagactttttgcaacttaaaaaaaa 18838371  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||       ||||||||||| ||||     
T  18838372 tattgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcgcttaaaaaaagtcttgtggtattcaaa 18838471  T
Q  211 atcattcaaatttcgaaggattgtttgataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||||||| |||||||| ||||||||||          |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18838472 atcattcaaatttcgaaagattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 18838571  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  18838572 atgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 18838624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 7993025 - 7993367
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  7993025 gggatgtattggattaagattctataggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 7993124  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||       ||||| ||||| ||||     
T  7993125 tctcgtggtattcaatcaagactctttgccattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttatggtattcaaa 7993224  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| |||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  7993225 atcattcaaatttcgaaggattgtttaataaattgaattttgatggattgtgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 7993324  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatct 343  Q
    || |||||||||||||||| |||| ||||||||||||||||||    
T  7993325 ataagatttcttgagattgtttttcttttaaaagttactatct 7993367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 13 - 353
Target Start/End: Complemental strand, 44122216 - 44121875
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa-gactttttgcaatttnnnnnnngt 111  Q
    ||||||||||||||| ||||||| | ||||||||||| |||||||||||| |||||| ||||||||||||||||| || ||||||||| ||             
T  44122216 gatgtattggattagaattctataggattttaaaagattttttaattatgaaaaagtattgtggtattcaatcaaagattttttgcaacttaaaaaaaaa 44122117  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
     || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||        |||||||||| |||| |    
T  44122116 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaa 44122017  T
Q  212 tcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 311  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  44122016 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttaatgaaaagatgagattttt 44121917  T
Q  312 tgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||| |||| |||||||||||||||||| ||| |||||    
T  44121916 tgagattgtttttcttttaaaagttactatctctttcttctc 44121875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 3022809 - 3023161
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||| ||||||||||||||| ||||||||||| |||||||||||| |||||| || ||||||| ||||||||||||||  || ||       |    
T  3022809 gggatgtattgaattaggattctatgggattttaaaagattttttaattatgaaaaagttttatggtatttaatcaagactttttaaaacttaaaaaaag 3022908  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||       ||||||||||| ||||     
T  3022909 tcttgtggtattcaatcaagactttttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaa 3023008  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  3023009 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtttttcatgaaaag 3023108  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||| ||||| ||| |||||    
T  3023109 atgagatttcttgagattgtttttcttttaaaagttagtatctctttcttctc 3023161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 33382522 - 33382872
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    |||||||| |||||||||||||||  |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| ||       | |    
T  33382522 gatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaacttaaaaaaagcc 33382621  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||  ||||| |||| ||    
T  33382622 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcatggtattcaaaat 33382721  T
Q  213 cattcaaatttcgaaggattgtttgataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||| ||||||||||||||||||| ||||||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  33382722 catttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaagat 33382821  T
Q  303 gagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||| || |||||| |||| |||||||| ||||||||| ||| |||||    
T  33382822 gagatttatttagattgtttttcttttaaaatttactatctctttcttctc 33382872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 110 - 354
Target Start/End: Original strand, 509638 - 509882
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||    
T  509638 gtcttgtggtattcaatcaagactatttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||||||||||||||| |||||||| |||||||||||||||  |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  509738 aatcattcaaatttcgaacgattgtttaataaattggattttgatggattttgtagtgggattttaacaagaaaaagtctttcatgaaaagatgagattt 509837  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctca 354  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||    
T  509838 cttgagattgtttttattttaaaagttactatctttttcttctca 509882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 19 - 353
Target Start/End: Complemental strand, 28035114 - 28034770
Alignment:
Q  19 ttggattaggattctatggaattttaaaagacttttt-aattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatg 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||  |||||| |||||||||||||| |||| ||||||||| ||       ||||| ||    
T  28035114 ttggattaggattctatggaattttaaaagacttttttaattattaaaaagttttgtggtattcaattaagattttttgcaacttaaaaaa-gtcttgtg 28035016  T
Q  118 gtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattc 217  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||       ||||||||||| |||| || ||||    
T  28035015 gtattcaatcaagactttttgtcattttaaaaaagtcttgagatattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaattattc 28034916  T
Q  218 aaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 307  Q
    ||||||| ||||||||||| |||||||||||||||          ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  28034915 aaatttcaaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaaaaaaaagtctttcatgaaaagatgagat 28034816  T
Q  308 ttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||| |||| ||||| |||||||||||| ||| |||||    
T  28034815 ttcttgagattgtttttcttttacaagttactatctctttcttctc 28034770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 11 - 309
Target Start/End: Complemental strand, 33892568 - 33892269
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||| | ||||||||||||            
T  33892568 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaaaattttttgcaatttaaaaaaaa 33892469  T
Q  111 --tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
      ||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||    
T  33892468 attctta-ggtattcaatcaacactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaacaaagtcttgtggtattca 33892370  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    | ||||||||||||||||| |||||||  ||||||||||||||   | |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  33892369 aaatcattcaaatttcgaatgattgttaaataaattggatttttatgaattttgtagtgtaattttaacaagaaaaagtctttcattaaaagatgagatt 33892270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 11 - 324
Target Start/End: Complemental strand, 17001340 - 17001037
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  17001340 gggatgtattggattaggattctatgagattttaaaaaactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 17001241  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||        | | |||||| ||||     
T  17001240 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaataaagacttttcatcacttaaaaaaaatatcgtggtattcaaa 17001141  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||          |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  17001140 atcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattataacaagaaaaagtctttcatgaaaatatgagatttc 17001051  T
Q  311 ttgagattggtttt 324  Q
    |||| |||| ||||    
T  17001050 ttgatattgttttt 17001037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 13 - 353
Target Start/End: Original strand, 41827199 - 41827539
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||||||||| ||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||       |||    
T  41827199 gatgtattggattagaattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagaatttttgcaacttaaaaaaagtc 41827298  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||||||||||| |||||| ||||||||||||||||| ||||||||| ||||||||||||||||||| | ||       ||||||||||             
T  41827299 ttgtggtattcaatcaagactttttgtcattttaaaaaaatcttgaggtgttcaatcaagacttttcataacttaaaaaaagtcttgtggt--------- 41827389  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
     ||||||| || |||||||||||| ||||||          |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||    
T  41827390 -attcaaaatttgaaggattgtttaataaattggattttgatggattttgtgggattgtgtagtgtaattttaacaagaaaatgtctttcatgaaaatat 41827488  T
Q  303 gagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  41827489 gagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 41827539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 146; E-Value: 9e-77
Query Start/End: Original strand, 11 - 333
Target Start/End: Complemental strand, 3797374 - 3797052
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||| ||||| |||||||  |||||||||||||||||||||||||| || ||| ||| ||||||||||||||||| ||||||||||       |    
T  3797374 gggatgtattagattatgattctaatgaattttaaaagactttttaattatgaaatagttttgaggtattcaatcaagactctttgcaatttaaaaaaag 3797275  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    || | || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||||    
T  3797274 tcatctgatattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaag 3797175  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg-tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
    |||||| |||||| |||||||||||| ||||||| ||||||| ||||||||| ||||| ||||||| || |||||||||||| | ||||| || ||||||    
T  3797174 atcattaaaattttgaaggattgtttaataaattagattttgatgggattttctagtgaaattttagcatgaaaaagtcttttaagaaaacat-agattt 3797076  T
Q  310 cttgagattggttttattttaaaa 333  Q
    |||  ||||| |||| ||||||||    
T  3797075 cttaggattgtttttcttttaaaa 3797052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 20 - 318
Target Start/End: Original strand, 19251431 - 19251729
Alignment:
Q  20 tggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggt 119  Q
    ||||||||||||||| |  |||||||||||||||||||||| | ||||||||||| |||||||||||||||| ||||||| ||       ||||| ||||    
T  19251431 tggattaggattctaagagattttaaaagactttttaattacgaaaaagtcttgtagtattcaatcaagactctttgcaacttaaaaaaagtcttgtggt 19251530  T
Q  120 attcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaa 219  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||       |||| |||||| |||| |||||||||    
T  19251531 attcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaagtctcgtggtattcaaaatcattcaa 19251630  T
Q  220 atttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagatt 318  Q
    ||||||||||||||||| |||||||||||||||  ||||||| | ||| ||||||| ||| |||||||||||||||||||  ||| |||||||| ||||    
T  19251631 atttcgaaggattgtttaataaattggattttgatggattttcttgtgaaattttagcaataaaaagtctttcatgaaaacctgaaatttcttgggatt 19251729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 22 - 353
Target Start/End: Original strand, 12740267 - 12740607
Alignment:
Q  22 gattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtat 121  Q
    |||||||||||||||  |||||||||||||||||||||||| |||| ||| ||| |||| ||| |||||||||||||| ||       ||||| ||||||    
T  12740267 gattaggattctatgagattttaaaagactttttaattatgaaaaaatctggtgatatttaattaagactttttgcaacttaaaaaaagtcttgtggtat 12740366  T
Q  122 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaat 221  Q
    ||||| |||| ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||       |||| |||||| |||| |||||||||||    
T  12740367 tcaatcaagattctttgtcatttttaaaaagtcttgaggtatttaatcaagatttttcatcatttaaaaaaagtctcgtggtattcaaaatcattcaaat 12740466  T
Q  222 ttcgaaggattgtttgataaat---------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||| ||||||||||| ||||||         | |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||    
T  12740467 ttcaaaggattgtttaataaatggattttgatagattttgtgggattttatagtgtaattttaacaagagaaagtctttcataaaaagatgagatttctt 12740566  T
Q  313 gagattggttttattttaaaagttactatctttttattctc 353  Q
     |||||| |||  |||||||||||||| ||| ||| |||||    
T  12740567 aagattgttttacttttaaaagttactgtctctttcttctc 12740607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 11 - 284
Target Start/End: Original strand, 32883664 - 32883948
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatc-aagactttttgcaatttnnnnnnn 109  Q
    |||||||||||||||| |||||||||| ||||||||||| |||||||||||| |||||| ||||| ||||||||| |||||||||||||| ||           
T  32883664 gggatgtattggattatgattctatgggattttaaaagattttttaattatgaaaaagttttgtgatattcaatctaagactttttgcaacttaaaaaaa 32883763  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||||| |||||||||||||| ||       ||||||||||| ||||    
T  32883764 gtcttatggtattcaatcaagactttttgtcattttaaaaaagtcttgaagtattcaattaagacttttcatcacttaaaaaaagtcttgtggtattcaa 32883863  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggatttt----------gtgggattttgtagtgtaattttaacaagaaaa 284  Q
     ||||||||||||||||| ||||||||  |||||||||||||          |||||||||||||||||||||||||||||||||    
T  32883864 aatcattcaaatttcgaatgattgtttattaaattggattttgatggatttcgtgggattttgtagtgtaattttaacaagaaaa 32883948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 116 - 339
Target Start/End: Original strand, 29585503 - 29585725
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| ||       ||||| ||||| |||| |||||    
T  29585503 tggtattcaatcaagattctttgtcattttaaaaaagtcttgaggtattcaatcaaaactttt-atcacttaaaaaaagtcttctggtattcaaaatcat 29585601  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    |||||||| |||||||||||| |||| ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  29585602 tcaaattttgaaggattgtttaataatttggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcataaaaagatgaaatttcttgag 29585701  T
Q  316 attggttttattttaaaagttact 339  Q
    |||| |||| ||||||||||||||    
T  29585702 attgtttttcttttaaaagttact 29585725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 44257077 - 44256741
Alignment:
Q  17 tattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttat 116  Q
    |||||||||||||||| |||  ||||||||| | |||||||||||| ||||||  ||||||||||||||||||||||||||||  |       ||||| |    
T  44257077 tattggattaggattcgatgagattttaaaaaagtttttaattatgaaaaagttctgtggtattcaatcaagactttttgcaaccttaaaaaagtcttgt 44256978  T
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
     ||||| ||| |||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||       || | |||||| |||| ||||||    
T  44256977 agtatttaatcaagactttttgtcattttaaaaaaatcttaaggtattcaatcaagacttttcatcacttaaaaaaagtatcgtggtattcaaaatcatt 44256878  T
Q  217 caaatttcgaaggattgtttgataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    ||||||||||| |||||||| |||||||||||||          ||| |||||||| |||||||||||||||||||||||| |||||| |||| ||||||    
T  44256877 caaatttcgaatgattgtttaataaattggatttggatgaattttgttggattttgcagtgtaattttaacaagaaaaagtttttcatcaaaatatgaga 44256778  T
Q  307 tttcttgagattggttttattttaaaagttactatct 343  Q
    ||| ||||||||| |||| |||||||||||| |||||    
T  44256777 ttttttgagattgtttttcttttaaaagttattatct 44256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 121 - 353
Target Start/End: Original strand, 8675326 - 8675567
Alignment:
Q  121 ttcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaa 220  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||| |||||| |||    
T  8675326 ttcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcatttaaa 8675425  T
Q  221 tttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
     ||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  8675426 cttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatcttttatgaaaagatgagatttc 8675525  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||| |||| |||| ||||||||||||| ||| |||||    
T  8675526 ttgagattgtttttctttt-aaagttactatctatttcttctc 8675567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 11 - 333
Target Start/End: Original strand, 10068349 - 10068682
Alignment:
Q  11 gggatgtattggattaggattct-atggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    ||||||||||||| || |||||| |||| |||||||||||||||||||||||| |||||||||||| ||||||||||| ||| ||||||||||           
T  10068349 gggatgtattggaatatgattctgatgg-attttaaaagactttttaattatgaaaaagtcttgtgatattcaatcaaaactctttgcaatttaaaaaaa 10068447  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtc-ttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
    ||||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||| ||       ||||||||||| |||    
T  10068448 gtcttgtggtatttaatcaagactctttgccattttaaaaaagtctttgaggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattca 10068547  T
Q  209 agatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | ||||||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||| |||||| |||    
T  10068548 aaatcattcaaattttgaaggattgtttaataaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcataaaa 10068647  T
Q  299 agatgagatttcttgagattggttttattttaaaa 333  Q
    | ||||||||| ||  ||||| |||| ||||||||    
T  10068648 acatgagatttgttaggattgtttttcttttaaaa 10068682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 43581403 - 43581096
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  43581403 tgtattggatcatgattctaaagaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 43581304  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  43581303 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgttgtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 43581204  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  43581203 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 43581104  T
Q  305 gatttctt 312  Q
    ||||||||    
T  43581103 gatttctt 43581096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 13 - 333
Target Start/End: Original strand, 12963587 - 12963911
Alignment:
Q  13 gatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtc 112  Q
    ||||||||||||||||||||||  || ||||||||||||||||||||| | ||||||||||||||| |||||||||||| ||||||| ||       |||    
T  12963587 gatgtattggattaggattctagaga-ttttaaaagactttttaattacgaaaaagtcttgtggtactcaatcaagactctttgcaacttaaaaaaagtc 12963685  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||| | ||       |||| ||||||  ||| ||    
T  12963686 ttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgagatattcaatcaagatttttcattacttaaaaaaagtctcgtggtatccaaaat 12963785  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| |||||||  ||||||||||||||  |      ||    
T  12963786 cattcaaatttcgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtaagaaaaagtctttttt-----cat 12963880  T
Q  303 gagatttcttgagattggttttattttaaaa 333  Q
    ||||||||||||||||| |||| ||||||||    
T  12963881 gagatttcttgagattgtttttcttttaaaa 12963911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 11 - 175
Target Start/End: Complemental strand, 48117910 - 48117746
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  48117910 gggatgtattggattagtattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 48117811  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    |||| ||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||||    
T  48117810 tcttgtggtattcaatcaagactctttgtcatttttgaaaagtcttgaggtattcaatcaagact 48117746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 30440690 - 30440997
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||| ||||||||||||||||||||||| ||| ||||||       |||||    
T  30440690 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 30440789  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||| ||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  30440790 gtgttattcaatcaagattctttgtcatttaaaaaaaatcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 30440889  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| |||||||  | ||||||||||||| |||||| ||||    
T  30440890 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagtatgaaaaagtctttcgtgaaaacatga 30440989  T
Q  305 gatttctt 312  Q
    ||||||||    
T  30440990 gatttctt 30440997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 44343709 - 44343402
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  44343709 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 44343610  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| | ||||||||||||||| || |||| ||       || | |||||| | || ||||    
T  44343609 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtgatattcaatcaagactcttaatcacttaaaaaaagtttagtggtatttaaaatca 44343510  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||| ||||| ||||    
T  44343509 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcacgaaaacatga 44343410  T
Q  305 gatttctt 312  Q
    ||||||||    
T  44343409 gatttctt 44343402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 15 - 324
Target Start/End: Original strand, 47914160 - 47914479
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| || |||||||||||||| || || ||| |||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  47914160 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47914259  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| || |||| ||||    
T  47914260 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47914359  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47914360 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47914459  T
Q  305 gatttcttgagattggtttt 324  Q
    |||||||| |||||| ||||    
T  47914460 gatttcttaagattgttttt 47914479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 973077 - 973385
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| || ||||||||||| |||||  || ||| |||||||||||||||||||||||||||| ||| ||||||       || |    
T  973077 tgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagttt 973176  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||        | | |||||| |||| |||    
T  973177 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatttagtggtattcaaaatc 973276  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| ||||||||||||||||||||||| |||    
T  973277 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcaagaaaaagtctttcatgaaaacatg 973376  T
Q  304 agatttctt 312  Q
    |||||||||    
T  973377 agatttctt 973385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 12893302 - 12893609
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| |||||  | ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  12893302 tgtattggatcatgattctaaggtattttaaaagatttttttttcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 12893401  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||||| |||||||||| || |||| ||       ||||  ||||| |||| ||||    
T  12893402 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatca 12893501  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||| ||||||| ||||||          ||||||||||| |||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  12893502 ttcaaatttcgaagaattgtttaataaatcagattttgatggattttgtgagattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 12893601  T
Q  305 gatttctt 312  Q
    ||||||||    
T  12893602 gatttctt 12893609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 18915024 - 18914741
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| || | ||||||    
T  18915024 attttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaaaattctttg 18914925  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    || ||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||| |||| |||||| |    
T  18914924 tcctttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcaaaggtttgtttaa 18914825  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  18914824 taaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 18914741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 20275576 - 20275269
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| | |||||||||||||||||||||||| | ||| ||||||       |||||    
T  20275576 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaataagtcttgtggtattcaatcaagattctttccaatttaaaaaaagtctt 20275477  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
      | |||||||| |||| || ||||||||| |||||||||||  ||||||||||||||||| || |||| ||       ||||| ||||| |||| ||||    
T  20275476 gggttattcaatcaagattccttgtcatttaaaaaaagtcttatggtattcaatcaagactcttaatcacttaaaaaaagtcttatggtattcaaaatca 20275377  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||| ||||||||  ||||    
T  20275376 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttttagtgaaattttagcatgaaaaagtctgtcatgaaagcatga 20275277  T
Q  305 gatttctt 312  Q
    ||||||||    
T  20275276 gatttctt 20275269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 324
Target Start/End: Original strand, 47879062 - 47879381
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| || |||||||||||||| || || ||| |||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  47879062 tgtattgaatcatgattctaagggattttaaaagacttatttataatgaaaaagtcttgtggtattcaatcaatactcttttcaattttaaaaaagtctt 47879161  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| ||||||||| || ||||||||||||||||| || |||| ||       |||| ||| || |||| ||||    
T  47879162 gtgttattcaatcaagattctttgtcatttaaaaaaagtcatgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatca 47879261  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||  ||||||||||| ||||||          |||||||||||| ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  47879262 ttcaaatttaaaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 47879361  T
Q  305 gatttcttgagattggtttt 324  Q
    |||||||| |||||| ||||    
T  47879362 gatttcttaagattgttttt 47879381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 40996963 - 40996655
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| || ||||||||| | |||||  || ||| || ||||||||||||||||||||||||| ||| ||||||       ||||    
T  40996963 tgtattggatcatgattctaagggattttaaaatattttttttatcatgaaagagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtct 40996864  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
      || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||  ||       |||| |||||| |||| |||    
T  40996863 cgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcgcttaaaaaaagtctagtggtattcaaaatc 40996764  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||||||||||||||| ||||||          |||||||||| ||||||| ||||| ||||||| || |||||||||||||||||||| |||    
T  40996763 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtaggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatg 40996664  T
Q  304 agatttctt 312  Q
    |||||||||    
T  40996663 agatttctt 40996655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 110 - 315
Target Start/End: Original strand, 47066685 - 47066881
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn-gtcttgtggtactca 208  Q
    ||||| ||||||||||| || |||||||||||||||||||||||||||| |||||||||||| |  |||||||| ||        ||||||||||| |||    
T  47066685 gtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgacgtattcaatcaaaaaatttcatcacttaaaaaaaagtcttgtggtattca 47066784  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    | |||||||||||||||||||||||||| |||||||||||          ||||||||||||||||||||||||||| | ||||||||||||||||||||    
T  47066785 aaatcattcaaatttcgaaggattgtttaataaattggat----------tttgtagtgtaattttaacaagaaaaaatatttcatgaaaagatgagatt 47066874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 299
Target Start/End: Original strand, 727406 - 727691
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  | |||||||| |||||||| || ||| |||||||||| ||||||||||||||||| ||| ||||||       |||||    
T  727406 tgtattggatcatgattctaatggattttaaatgacttttttatcatgaaaaagtcttgcggtattcaatcaagactcttttcaatttaaaaaaagtctt 727505  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnng-tcttgtggtactcaagatc 213  Q
     || |||||||| || | |||||||||||| |||||||||||| | ||||||||||| ||| || |||| ||         ||| || ||| |||| |||    
T  727506 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtgatattcaatcaaaactctttatcacttaaaaaaaaatctagtagtattcaaaatc 727605  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    ||||||||||| ||||||||||| ||||||  |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  727606 attcaaatttcaaaggattgtttaataaatcagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 727691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 39 - 312
Target Start/End: Complemental strand, 7719550 - 7719266
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa-gactttttgcaatttnnnnnnngtcttatggtattcaattaagactcttt 137  Q
    ||||||||||||||||| || ||| |||| ||||||||||||||||||| |||| ||| ||||||       ||||| || |||||||| || | | |||    
T  7719550 attttaaaagacttttttatcatgaaaaattcttgtggtattcaatcaaagactctttccaatttaaaaaaagtcttgtgttattcaatcaatattattt 7719451  T
Q  138 gtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttg 237  Q
    ||||||| |||||||||||| ||||||||||||||||| || |||| ||        ||| |||||| |||| ||||||||||||||||| ||||||||     
T  7719450 gtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctagtggtattcaaaatcattcaaatttcgaatgattgttta 7719351  T
Q  238 ataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  7719350 ataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 7719266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 64 - 312
Target Start/End: Original strand, 34695216 - 34695474
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| || ||||||||| |||||||| ||| |||||    
T  34695216 aaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattccttgtcatttaaaaaaagttttgtggtat 34695315  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||||||| || |||| ||       |||  |||||| |||| | |||||||||||||||||||||||| ||||||          ||||||||||    
T  34695316 tcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaaccattcaaatttcgaaggattgtttaataaatcagattttgatggattttgt 34695415  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  34695416 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 34695474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 39 - 353
Target Start/End: Complemental strand, 43187632 - 43187321
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    |||||||||||||||||||||||| || ||||||||||||||||||||||||| |||| |||||       |||||||||||||||||||| ||||||||    
T  43187632 attttaaaagactttttaattatgaaagagtcttgtggtattcaatcaagactctttgtaatttaaaaaaagtcttatggtattcaattaaaactctttg 43187533  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||||||||||||              |||| |  |||||||| ||       ||||  ||||| |||| ||||||||||||| |||| ||||||| |    
T  43187532 tcattttaaaaaagt--------------tcaaaaaatttcatcacttaaaaaaagtctcatggtattcaaaatcattcaaattttgaagcattgtttaa 43187447  T
Q  239 taaattgg----------attttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattt 328  Q
    ||||||||          ||||||| ||||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| ||| ||||| |||| |||    
T  43187446 taaattggattttgatgaattttgtcggattttctagtgaaattttaacaagaaaaagtctttcatgaagacatgagattttttgggattgtttttcttt 43187347  T
Q  329 taaaag-ttactatctttttattctc 353  Q
    |||||| ||||||||  |||||||||    
T  43187346 taaaagtttactatcactttattctc 43187321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 119 - 312
Target Start/End: Original strand, 9179871 - 9180064
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattca 218  Q
    |||||||| |||| |||||||||||| |||||||| |||  |||||||||||||||| ||||||| ||       |||||||||||  ||| |||| | |    
T  9179871 tattcaatcaagattctttgtcatttaaaaaaagttttgtcgtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatacaaaatcactta 9179970  T
Q  219 aatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||| ||||||||||||| |||||||||||||||||||||||| ||||| | ||||| ||  ||||||||||||||||||| ||||||||||||    
T  9179971 aattccgaaggattgtttaataaattggattttgtgggattttctagtgaatttttagcataaaaaagtctttcatgaaaacatgagatttctt 9180064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 509581 - 509737
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||       |    
T  509581 gggatgtattggattaggattttatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactatttgtcattttaaaaaag 509680  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||||  |||||||||| |||||| ||  |||||| |||||||||||| |||||||||    
T  509681 tcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 509737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 37972941 - 37972832
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||| |||||    
T  37972941 tggattttgcgggattttatagtgtaattttaacaagaaaaagtctttcatgaaaagatgagacttcttgagattgtttttcttttaaaagttattatct 37972842  T
Q  344 ttttattctc 353  Q
     ||| |||||    
T  37972841 ctttcttctc 37972832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 21067765 - 21067853
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa 99  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  21067765 gggatgtattggattaggattctatgagattttaaaagattttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 21067853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 39 - 266
Target Start/End: Original strand, 31638793 - 31639020
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| ||||||| |||||||||||||||||||| ||| ||||||       ||||| || |||||||| || | ||||||    
T  31638793 attttaaaagacttttttatcatgaaaaagtcatgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttg 31638892  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||| |  || ||||||| ||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| |    
T  31638893 tcatttaaaaaaacttgtgtggtattctatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaa 31638992  T
Q  239 taaattggattttgtgggattttgtagt 266  Q
    |||||  |||||||  ||||||| ||||    
T  31638993 taaatcagattttgatggattttctagt 31639020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 34008909 - 34009214
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || ||| ||||||||   ||||||||||||||||| ||| ||||||       |||||    
T  34008909 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtct---ggtattcaatcaagactcttttcaatttaaaaaaagtctt 34009005  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtctt-gtggtactcaagatc 213  Q
     || |||||||| |||| | |||||||||| |||||||||||| ||||||||||||| ||| || |||| ||       ||| | |||||| |||| |||    
T  34009006 gtgttattcaatcaagattatttgtcatttaaaaaaagtcttgtggtattcaatcaacactcttaatcacttaaaaaaagtcctagtggtattcaaaatc 34009105  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||||||||||||||| ||||||          |||||||||||| ||||| || |  ||||||| ||  ||||||||||||| ||||| |||    
T  34009106 attcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctaataaaattttagcataaaaaagtctttcaagaaaacatg 34009205  T
Q  304 agatttctt 312  Q
    |||||||||    
T  34009206 agatttctt 34009214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 173
Target Start/End: Original strand, 34695125 - 34695283
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  34695125 tgtattgaatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 34695224  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 173  Q
     ||||||||||| ||||||||||   |||| |||||||||||| | |||||||||||||    
T  34695225 gtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaaga 34695283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 206 - 325
Target Start/End: Original strand, 19810877 - 19810996
Alignment:
Q  206 tcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    |||| |||||||||||||| || |||||||| |||||||||||||||||| ||||| ||||| ||||||| ||  |||| |||||||||||||| |||||    
T  19810877 tcaaaatcattcaaatttcaaatgattgtttaataaattggattttgtggaattttctagtgaaattttagcataaaaatgtctttcatgaaaacatgag 19810976  T
Q  306 atttcttgagattggtttta 325  Q
    |||||||||||||| |||||    
T  19810977 atttcttgagattgttttta 19810996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 15 - 324
Target Start/End: Complemental strand, 32143233 - 32142911
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| || |||||||||||||||||  || ||| |||||||||||| ||||||||||||||| |||  |||||       ||||    
T  32143233 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttctaatttaaaaaaagtct 32143134  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnn--gtcttgtggtactcaaga 211  Q
    | || |||||||| ||   | |||||||||| |||||||||||  |||||| |||||||||| || |||| ||         |||  |||||| |||| |    
T  32143133 tgtgttattcaataaattttttttgtcatttaaaaaaagtcttatggtattgaatcaagactcttaatcacttcaaaaaaaagtcacgtggtattcaaaa 32143034  T
Q  212 tcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    |||||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||| ||| |||| |    
T  32143033 tcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtcttccataaaaaca 32142934  T
Q  302 tgagatttcttgagattggtttt 324  Q
    ||||||||||| |||||| ||||    
T  32142933 tgagatttcttaagattgttttt 32142911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 141 - 312
Target Start/End: Complemental strand, 7718549 - 7718368
Alignment:
Q  141 attttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgata 240  Q
    |||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| |||    
T  7718549 atttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaata 7718450  T
Q  241 aat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||          |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||||||||||    
T  7718449 aatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatctttcatgaaaacatgagatttctt 7718368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 11 - 96
Target Start/End: Original strand, 29893006 - 29893091
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||| |||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  29893006 gggatgtattagattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttg 29893091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 10 - 95
Target Start/End: Complemental strand, 37973092 - 37973007
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagacttttt 95  Q
    |||||||||||||||||||||||||||  ||||||||| |||||||||||||| || |||||||||||||||||||||||||||||    
T  37973092 agggatgtattggattaggattctatgagattttaaaatactttttaattatgaaagagtcttgtggtattcaatcaagacttttt 37973007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 119 - 309
Target Start/End: Complemental strand, 44623485 - 44623295
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattca 218  Q
    |||||||| ||||||||||||||||| |||||||||||| |||||| |||||||||| ||||||| ||       |||| ||| || |||| ||||||||    
T  44623485 tattcaatcaagactctttgtcatttaaaaaaagtcttgtggtatttaatcaagactcttcatcactttaaaaaggtctcgtgatattcaaaatcattca 44623386  T
Q  219 aatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||| || || ||||| |||||||| ||||||||| ||||| ||||| |||||||  | |||||||||| |||| |||| |||| ||||    
T  44623385 tatttctaaagactgtttaataaattgaattttgtggaattttctagtgaaattttagaatgaaaaagtctctcataaaaatatgatattt 44623295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 155
Target Start/End: Complemental strand, 10676695 - 10676551
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||| || ||||||| ||||| || |||||||||||||||||||||||| |||| |||||||||||| |||||||||| ||||||||||       |    
T  10676695 gggatgtgttagattaggtttctaagggattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagactctttgcaatttaaaaaagg 10676596  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtct 155  Q
    |||| ||||||||||| |||||| ||  ||| || ||||||||||    
T  10676595 tcttgtggtattcaatcaagacttttcatcacttaaaaaaagtct 10676551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 111 - 250
Target Start/End: Complemental strand, 10676637 - 10676498
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||| ||| |||||||||||  |||| ||||| |||||| ||||||||||||||||||||||||| ||       ||||  | ||| ||||     
T  10676637 tcttgtggtatttaatcaagactctttgcaatttaaaaaaggtcttgtggtattcaatcaagacttttcatcacttaaaaaaagtctcattgtattcaaa 10676538  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattt 250  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  10676537 atcattcaaatttcgaaggattgtttaataaattggattt 10676498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 110 - 183
Target Start/End: Original strand, 29893063 - 29893136
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
    ||||| ||||||||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  29893063 gtcttgtggtattcaatcaagactctttgtcattttaaaacagtcatgaggtattcaatcaagacttttcatca 29893136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 47066630 - 47066713
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatg-gaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||  |||||||||||||||||||||||| ||| ||||    
T  47066630 atgtattggattaggattctatgggatttaaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaaaactctttg 47066713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 8078289 - 8078450
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||  |||||||||||||||||||||||||||| ||| ||||||          ||    
T  8078289 tgtattggatcatgattctaagggattttaaaagacttttttatcataaaaaagtcttgtggtattcaatcaagactctttccaattttaaaaaaaattt 8078388  T
Q  115 atggtattcaattaagactctttgtcattttaaaaa-agtcttgaggtattcaatcaagact 175  Q
     || |||||||| |||| |||||||||||| ||||| | ||||| |||||||||||||||||    
T  8078389 gtgttattcaatcaagattctttgtcatttaaaaaagaatcttgtggtattcaatcaagact 8078450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 39219648 - 39219561
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||| |  |||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||    
T  39219648 tgtattggatcataattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 39219561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 102
Target Start/End: Original strand, 43679355 - 43679451
Alignment:
Q  7 aagagggatgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||||||||||| | ||||||| || ||||||||||| |||||  || ||| |||||||||||||||||||||||||||| ||| ||||||    
T  43679355 aagagggatgtattggatcatgattctaagggattttaaaagattttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaattt 43679451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 28 - 312
Target Start/End: Original strand, 7113363 - 7113653
Alignment:
Q  28 gattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaat 126  Q
    ||||||| || |||||||||||||||||  || |||  ||||| || |||||||||||||||||| ||| ||||||       ||||| || ||||||||    
T  7113363 gattctaagggattttaaaagactttttttatcatgacaaagtatt-tggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaat 7113461  T
Q  127 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcga 226  Q
    ||||| | ||| |||||| |||||||| ||| ||||||||||    |||||| |||| ||       |||  |||||| |||| || ||||||||||||     
T  7113462 taagattttttatcatttaaaaaaagttttgtggtattcaat----acttttaatcacttaaaaaaagtccagtggtattcaaaataattcaaatttcgc 7113557  T
Q  227 aggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||||| ||||||          | |||||||||||||||| |||   ||||||| || |||||||||||||||||||| |||| |||||||    
T  7113558 aggattgtttaataaatcagattttgatagattttgtgggattttctaggaaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 7113653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 39219595 - 39219383
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
    ||||| ||||||||||| ||||||||||   |||| |||||| |||||| | ||||||||||||||| || |||| ||       ||||  ||||| |||    
T  39219595 gtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtcttgtgttattcaatcaagactcttaatcacttaaaaaaagtctattggtattca 39219496  T
Q  209 agatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | ||||||||||||| || | ||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||    
T  39219495 aaatcattcaaattttgatg-attgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaa 39219397  T
Q  299 agatgagatttctt 312  Q
    | ||||||||||||    
T  39219396 acatgagatttctt 39219383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 29585440 - 29585518
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    ||||| ||||| |||| ||||||| |  ||||||||||| |||||||||||| |||||| |||||||||||||||||||    
T  29585440 gggatttattgaattatgattctacgagattttaaaagattttttaattatgaaaaagttttgtggtattcaatcaaga 29585518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 33 - 94
Target Start/End: Original strand, 21066803 - 21066864
Alignment:
Q  33 tatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||||||||  ||  |||||| ||||||||||||||||||||||||    
T  21066803 tatggaattttaaaagactttttaaaaataaaaaagttttgtggtattcaatcaagactttt 21066864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Original strand, 3634216 - 3634295
Alignment:
Q  15 tgtattggattaggatt-ctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| ||||| ||| ||| |||||||||||||||| |||||  |||||||||||| ||||||||||||||||||    
T  3634216 tgtattggattcggatttctaggga-ttttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttt 3634295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 119 - 186
Target Start/End: Complemental strand, 1470441 - 1470374
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt 186  Q
    ||||||||||||||| |||||||||| |||||||||||| | ||||||||  | ||||||||||||||    
T  1470441 tattcaattaagactatttgtcatttaaaaaaagtcttgtgatattcaatataaacttttcatcattt 1470374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 111 - 263
Target Start/End: Original strand, 25805675 - 25805827
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||| ||||||| |||| ||||||| |||| |||||| ||| | ||||||||||||| | ||||||||| ||          |||||||| ||||     
T  25805675 tcttgtggcattcaatcaagattctttgtaatttaaaaaaaatctagtggtattcaatcaaaatttttcatcacttaaaaaaaaatttgtggtattcaaa 25805774  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    ||||||||||||||| |||||||||| |||||||| ||| ||  |||||||||    
T  25805775 atcattcaaatttcgtaggattgtttaataaattgaattatgatggattttgt 25805827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 34695178 - 34695243
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| ||||||||||| ||||||||||   |||| |||||||||||| |||||||||||||||||    
T  34695178 gtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtggtattcaatcaagact 34695243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 199 - 289
Target Start/End: Original strand, 43679492 - 43679592
Alignment:
Q  199 gtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtc 288  Q
    |||||| |||| |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||    
T  43679492 gtggtattcaaaatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtc 43679591  T
Q  289 t 289  Q
    |    
T  43679592 t 43679592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 34115530 - 34115475
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||| ||  |||| |||||| |||||||||||||||||||    
T  34115530 attttaaaagactttttaatgataaaaaaatcttgtagtattcaatcaagactttt 34115475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 341
Target Start/End: Original strand, 32883944 - 32883990
Alignment:
Q  295 gaaaagatgagatttcttgagattggttttattttaaaagttactat 341  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||||||    
T  32883944 gaaaagatgagatttattgagattgtttttcttttaaaagttactat 32883990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 183
Target Start/End: Original strand, 10616955 - 10617003
Alignment:
Q  135 tttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca 183  Q
    ||||||||||| ||||||||||||||||||| ||||||| ||| |||||    
T  10616955 tttgtcatttttaaaaagtcttgaggtattcgatcaagattttccatca 10617003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 40097140 - 40097176
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  40097140 ttttaaaaaagtctttaggtattcaatcaagactttt 40097176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 447852 - 447907
Alignment:
Q  197 ttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttg 252  Q
    |||||||| | || ||||||||||||||||| |||||||| || ||||||||||||    
T  447852 ttgtggtatttaaaatcattcaaatttcgaatgattgtttaattaattggattttg 447907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 27418699 - 27418644
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  27418699 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 27418644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 353
Target Start/End: Original strand, 29893173 - 29893220
Alignment:
Q  306 atttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  29893173 atttcttgagattgtttttcttttaaaagttactatctctttcttctc 29893220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 15 - 81
Target Start/End: Original strand, 9179770 - 9179836
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattc 81  Q
    ||||||||||||| ||||||    ||||||||||||||||| || ||| |||||||||||| |||||    
T  9179770 tgtattggattagcattctaaaagattttaaaagacttttttatcatgaaaaagtcttgtgatattc 9179836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 31494266 - 31494316
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||||||||||  |||| ||||| ||||| |||||||||||||||    
T  31494266 attttaaaagactttttggttatagaaaaatcttgaggtattcaatcaaga 31494316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 214 - 252
Target Start/End: Complemental strand, 37972981 - 37972943
Alignment:
Q  214 attcaaatttcgaaggattgtttgataaattggattttg 252  Q
    ||||||||||||||||||| ||| |||||||||||||||    
T  37972981 attcaaatttcgaaggattatttaataaattggattttg 37972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 9599123 - 9599067
Alignment:
Q  39 attttaaaagacttttt-aattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||| ||||||| ||||||  ||||||||||| |||||||||||||| ||||    
T  9599123 attttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaatttt 9599067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 9826694 - 9826638
Alignment:
Q  39 attttaaaagacttttt-aattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||| ||||||| ||||||  ||||||||||| |||||||||||||| ||||    
T  9826694 attttaaaaaacttttttaattataaaaaagtcttgtagtattcaatcaagaatttt 9826638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 87
Target Start/End: Complemental strand, 35090163 - 35090115
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaa 87  Q
    |||||||||||||||||  || |  ||||||||||||||||||||||||    
T  35090163 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaa 35090115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 39301283 - 39301247
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| ||||||| |||||||||||||    
T  39301283 ttttaaaaaagtctttaggtatttaatcaagactttt 39301247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 34 - 94
Target Start/End: Complemental strand, 46037412 - 46037352
Alignment:
Q  34 atggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||| ||||||||||||||||| || ||  |||||| | ||| ||||||||||||||||||    
T  46037412 atgggattttaaaagacttttttataattaaaaagtttagtgatattcaatcaagactttt 46037352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 48399725 - 48399805
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagac 90  Q
    |||| ||||||| |||  |||| ||||  |||||||||||||||||||  ||  |||| |||||||||| |||||||||||    
T  48399725 aggggtgtattgaattgtgattttatgagattttaaaagactttttaaaaataaaaaaatcttgtggtaatcaatcaagac 48399805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 233; Significance: 1e-128; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 31895584 - 31895937
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  31895584 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 31895683  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||       ||||||||||| ||||     
T  31895684 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaagtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 31895783  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  31895784 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttctagtgtaattttaacaagaaaaagtctttcatgaaaag 31895883  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  31895884 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 31895937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 34773297 - 34773639
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  34773297 gggatgtattggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 34773396  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        |||||||||| ||||     
T  34773397 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtggtattcaaa 34773496  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| |||||||||||||||          |||||||||| |||||||||||||||||||||||||||||||||||||    
T  34773497 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgcagtgtaattttaacaagaaaaagtctttcatgaaaag 34773596  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||           |||||||||||||||||||||||| ||||||    
T  34773597 atgagatttctt-----------tattttaaaagttactatctttttcttctca 34773639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 11 - 339
Target Start/End: Complemental strand, 14262750 - 14262412
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||| ||       |    
T  14262750 gggatgtattggattaggattctacgggattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagattttttgcaacttaaaaaaag 14262651  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||       ||||||||||| ||||     
T  14262650 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagatttttcatcatttaaaaaaagtcttgtggtattcaaa 14262551  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||| ||||||||||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14262550 atcatttaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 14262451  T
Q  301 atgagatttcttgagattggttttattttaaaagttact 339  Q
    ||| ||||||||||||||| |||| ||||||||||||||    
T  14262450 atgggatttcttgagattgtttttcttttaaaagttact 14262412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 110 - 353
Target Start/End: Complemental strand, 30385275 - 30385034
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| ||       ||||||||||| ||||    
T  30385275 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaaaaattttcatcacttaaaaaaagtcttgtggtattcaa 30385176  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||||||||||    
T  30385175 aatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaaca--acaaagtctttcatgaaaagatgagattt 30385078  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||| |||| |||||||| ||||||||| ||| |||||    
T  30385077 cttgagattgtttttcttttaaaaattactatctctttcttctc 30385034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 110 - 343
Target Start/End: Complemental strand, 34759269 - 34759025
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaa-gtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactca 208  Q
    ||||| ||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||       ||||||||||| |||    
T  34759269 gtcttgtggtattcaatcaagactctttgtcattttaaaaaaagtcttgaagtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattca 34759170  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggat----------tttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | |||||||||||||| ||||||||||| |||||||||||          ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  34759169 aaatcattcaaatttccaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaaatctttcatgaaa 34759070  T
Q  299 agatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||    
T  34759069 agatgagatttcttgagattatttttcttttaaaagttactatct 34759025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 131; E-Value: 8e-68
Query Start/End: Original strand, 197 - 347
Target Start/End: Original strand, 31067567 - 31067717
Alignment:
Q  197 ttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatga 296  Q
    |||||||| |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  31067567 ttgtggtattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcataa 31067666  T
Q  297 aaagatgagatttcttgagattggttttattttaaaagttactatcttttt 347  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  31067667 aaagatgagatttcttgagattgtttttattttaaaagttactatcttttt 31067717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 214 - 354
Target Start/End: Complemental strand, 4200541 - 4200401
Alignment:
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 313  Q
    ||||||||||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4200541 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 4200442  T
Q  314 agattggttttattttaaaagttactatctttttattctca 354  Q
    |||||| ||||||||||||||||||||||||||| ||||||    
T  4200441 agattgtttttattttaaaagttactatctttttcttctca 4200401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 116 - 353
Target Start/End: Original strand, 7497069 - 7497315
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| ||||||  |||  | || |||||||||||| ||||||||||||||| ||||||||| ||       ||||||||||| |||| |||||    
T  7497069 tggtattcaatcaagacttgttgcaacttaaaaaaagtcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 7497168  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttg--------tg-ggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    ||||||||||||||| ||||| |||||||||||||||        || ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7497169 tcaaatttcgaaggagtgtttaataaattggattttgatggattttgtggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 7497268  T
Q  307 tttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||  |||| |||||||||||||||||| |||||||||    
T  7497269 tttcttgagattatttttcttttaaaagttactatctctttattctc 7497315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 2301051 - 2300744
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  2301051 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 2300952  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||| | || ||||    
T  2300951 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttgatcacttaaaaaaagtctactggtattgaaaatca 2300852  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  2300851 ttcaaatttcgaaggattgtttaataaataagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 2300752  T
Q  305 gatttctt 312  Q
    ||||||||    
T  2300751 gatttctt 2300744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 6197791 - 6197484
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||| ||||||| || ||| ||||||| |||||||||||||||||||| ||| ||||||       |||||    
T  6197791 tgtattggatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtctt 6197692  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  6197691 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 6197592  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  6197591 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 6197492  T
Q  305 gatttctt 312  Q
    ||||||||    
T  6197491 gatttctt 6197484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 22 - 265
Target Start/End: Original strand, 7051744 - 7051987
Alignment:
Q  22 gattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtat 121  Q
    ||||||||||||| |  ||||||||||||||||| || ||| |||||||||||| ||||||||||||||| ||||||| ||       ||||| ||||||    
T  7051744 gattaggattctaagagattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttgcaacttaaaaaaagtcttgtggtat 7051843  T
Q  122 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaat 221  Q
     | || |||| |||||||||||| |||||||||||| ||||| ||||||||||| ||||||| ||       ||| |||| || |||| |||||||||||    
T  7051844 acgatcaagattctttgtcatttaaaaaaagtcttgtggtatacaatcaagactcttcatcacttaaaaaaagtcgtgtgatattcaaaatcattcaaat 7051943  T
Q  222 ttcgaaggattgtttgataaattggattttgtgggattttgtag 265  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  7051944 ttcgaaggattgtttaataaattggattttgatggattttgtag 7051987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 308
Target Start/End: Original strand, 1391516 - 1391819
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  | |||||||| |||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  1391516 tgtattggatcatgattctaaaggattttaaatgacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 1391615  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| || ||||||||| || ||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  1391616 gtgttattcaatcaagattcattgtcatttaaataaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 1391715  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||  || |||||||||||||||||||| ||||    
T  1391716 ttcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaacatga 1391815  T
Q  305 gatt 308  Q
    ||||    
T  1391816 gatt 1391819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 39 - 304
Target Start/End: Original strand, 28002581 - 28002856
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||| |||||| |||||||||||||||| ||| ||||||       ||||| |  |||||||| |||| | ||||    
T  28002581 attttaaaagacttttttataatgaaaaaatcttgtcgtattcaatcaagactctttccaatttaaaaaaagtcttgtcttattcaatcaagattttttg 28002680  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||||||||  ||||||||||||||||| || |||| ||       |||| ||| || |||| ||||||||||||| |||||||||||| |    
T  28002681 tcatttaaaaaaagtcttctggtattcaatcaagactcttaatcacttaaaaaaagtctagtgatattcaaaatcattcaaatttggaaggattgtttaa 28002780  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||          |||||||||||  ||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  28002781 taaatcagattttgatggattttgtgaaattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 28002856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 29076489 - 29076795
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| |  |||||||||||||||||  || ||| |||||||||||| ||||||||||||||| ||| ||||||       ||||    
T  29076489 tgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaagtct 29076588  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagat 212  Q
    | || |||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||        |||| || ||| |||| ||    
T  29076589 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaagtctagtagtattcaaaat 29076688  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          |||||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| ||    
T  29076689 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaacat 29076788  T
Q  303 gagattt 309  Q
    |||||||    
T  29076789 gagattt 29076795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 15 - 309
Target Start/End: Original strand, 29111462 - 29111769
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | ||||||| |  |||||||||||||||||  || ||| |||||||||||| ||||||||||||||| ||| ||||||       ||||    
T  29111462 tgtattggatcatgattctaagagattttaaaagactttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaataaagtct 29111561  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattt--nnnnnnngtcttgtggtactcaaga 211  Q
    | || |||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||| | || |||| ||         |||| || ||| |||| |    
T  29111562 tgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatctagattcttaatcacttaaaaaaaaagtctagtagtattcaaaa 29111661  T
Q  212 tcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    ||||||||||||||||||||||||| ||||||          |||||||| | ||||||| ||||| ||||||| || |||||| |||||||| |||| |    
T  29111662 tcattcaaatttcgaaggattgtttaataaatcagattttgatggattttataggattttctagtgaaattttagcatgaaaaaatctttcataaaaaca 29111761  T
Q  302 tgagattt 309  Q
    ||||||||    
T  29111762 tgagattt 29111769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 7497006 - 7497162
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||| ||||||||  ||||||||||| |||||||||||| |||||| || ||||||||||||||||||| |||||| ||       |    
T  7497006 gggatgtattggattagaattctatgagattttaaaagattttttaattatgaaaaagtattctggtattcaatcaagacttgttgcaacttaaaaaaag 7497105  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    |||| ||||||||||| |||| | ||  ||| || |||||||||||| |||||||||    
T  7497106 tcttgtggtattcaatcaagatttttcatcacttaaaaaaagtcttgtggtattcaa 7497162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 31609749 - 31609694
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  31609749 attttaaaagactttttaattataaaaaaatcttgtggtattcaatcaagactttt 31609694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 111 - 255
Target Start/End: Original strand, 3848200 - 3848342
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| || ||| |||||||||| ||| |||| ||| |||| |||||||||||  ||||||| ||       || |||||||| ||||     
T  3848200 tcttgtggtattcaatcaaaactttttgtcatttaaaacaagtattgtggtaatcaatcaagac--ttcatcacttaaaaaaagttttgtggtattcaaa 3848297  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgg 255  Q
    |||||| |||||| ||| |||||||| |||||||| |||||||||    
T  3848298 atcatttaaattttgaatgattgtttaataaattgaattttgtgg 3848342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 11 - 96
Target Start/End: Complemental strand, 30385334 - 30385247
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagacttttt--aattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||  || |    |||||||||||||||||||||||||||| ||||    
T  30385334 gggatgtattggattaggattctatgagattttaaaagattttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttg 30385247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 34759324 - 34759241
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttt--aattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||||||||||||||  |||||||||||||||||  || |    |||||||||||||||||||||||||||| ||||    
T  34759324 tgtattggattaggattctatgagattttaaaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaagactctttg 34759241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 5957153 - 5957208
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| || ||  |||||||| ||||||||||||||||||||||    
T  5957153 attttaaaagacttttttataataaaaaagtctagtggtattcaatcaagactttt 5957208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 7100191 - 7100246
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |  ||| |||||||| ||||||||||||||||||||||    
T  7100191 attttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 7100246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 8794439 - 8794384
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |  ||| |||||||| ||||||||||||||||||||||    
T  8794439 attttaaaagacttttttagaatgaaaaagtctagtggtattcaatcaagactttt 8794384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 656962 - 657017
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    |||||||| |||| |||||| ||||| |||||||||||| |||||||||||||||||    
T  656962 tattcaatcaagattctttg-catttaaaaaaagtcttgtggtattcaatcaagact 657017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 10644052 - 10644016
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  10644052 ttttaaaaaagtctttaggtattcaatcaagactttt 10644016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 30877898 - 30877934
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30877898 ttttaaaaaagtctttaggtattcaatcaagactttt 30877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 708942 - 708997
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| || ||| |||| ||| ||||||||||||||| ||||||    
T  708942 attttaaaagacttttttataatgaaaaaatctagtggtattcaatcaaaactttt 708997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 90
Target Start/End: Complemental strand, 11007739 - 11007688
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagac 90  Q
    ||||||||||||||||||| |||  ||||||||||||||||| ||| |||||    
T  11007739 attttaaaagactttttaaatataaaaaagtcttgtggtatttaattaagac 11007688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 280 - 324
Target Start/End: Original strand, 2238678 - 2238722
Alignment:
Q  280 gaaaaagtctttcatgaaaagatgagatttcttgagattggtttt 324  Q
    |||||| ||||||||||||| |||||||||||| |||||| ||||    
T  2238678 gaaaaaatctttcatgaaaacatgagatttcttaagattgttttt 2238722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 229; Significance: 1e-126; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 354
Target Start/End: Complemental strand, 14000422 - 14000069
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||            
T  14000422 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaaa 14000323  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  14000322 tcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 14000223  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||| |||||||||||| |||||||||||||||          ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14000222 atcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 14000123  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  14000122 atgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 14000069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 14 - 347
Target Start/End: Complemental strand, 4240766 - 4240433
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||        |||    
T  4240766 atgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaaatct 4240667  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||| |||    
T  4240666 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatc 4240567  T
Q  214 attcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttg 313  Q
    ||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  4240566 attcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaatagatgagatttcttg 4240467  T
Q  314 agattggttttattttaaaagttactatcttttt 347  Q
    |||||| |||| ||||||||||||||||||||||    
T  4240466 agattgtttttcttttaaaagttactatcttttt 4240433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 5948998 - 5949339
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||| ||||||||||||||||||| |||||||||||| ||||||||||| |||| | ||||||||||||||||| ||||||||||| ||       |    
T  5948998 gggatgtgttggattaggattctatgggattttaaaagaccttttaattatgaaaaatttttgtggtattcaatcaaaactttttgcaacttaaaaaaag 5949097  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||        |||||||||| ||||     
T  5949098 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaaatttttcatcacttaaaaaaa-tcttgtggtattcaaa 5949196  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5949197 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 5949296  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||| |||| |||||||||||| ||||| |||||||||    
T  5949297 ttgagattgtttttcttttaaaagttattatctctttattctc 5949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 343
Target Start/End: Complemental strand, 40014016 - 40013687
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||||||||||  || ||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||||||       |    
T  40014016 gggatgtattggattaggattct--gggattttaaaaga-tttttaattatgaaaaagtcttgtgatattcaatcaagactttttgcaatttaaaaaaag 40013920  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||        ||||||| || ||||     
T  40013919 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaaatcttgtgttattcaaa 40013820  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| || |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40013819 atcattcaaatttcgaaggattgtttaatcaattggattttaatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 40013720  T
Q  311 ttgagattggttttattttaaaagttactatct 343  Q
    ||||||||| |||| |||| |||||||||||||    
T  40013719 ttgagattgtttttgtttttaaagttactatct 40013687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 1152420 - 1152068
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||| |||||||| ||||||||| ||       |    
T  1152420 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtatttaatcaagattttttgcaacttaaaaaaag 1152321  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||       ||||||||||| ||||     
T  1152320 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttttatcacttaaaaaaagtcttgtggtattcaaa 1152221  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||| ||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1152220 atcattcaaatttcgagggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtcttttatgaaaag 1152121  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||||||||||| |||||| |||| |||||||||||||||||| ||| |||||    
T  1152120 atgagatttcttaagattgtttttcttttaaaagttactatctctttcttctc 1152068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 11 - 329
Target Start/End: Complemental strand, 4550574 - 4550246
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  4550574 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 4550475  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  4550474 tcttgtggtattcaatcaagactctttgtcattttaacaaaggcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 4550375  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||    
T  4550374 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaagagtctttcatgaaaag 4550275  T
Q  301 atgagatttcttgagattggttttatttt 329  Q
    ||||||||| ||||||||| |||| ||||    
T  4550274 atgagatttgttgagattgtttttttttt 4550246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 8 - 342
Target Start/End: Original strand, 37013800 - 37014124
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnn 107  Q
    ||||||||||||||||||| |||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||         
T  37013800 agagggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaa 37013899  T
Q  108 nngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactc 207  Q
      ||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||       |||||| |||| ||    
T  37013900 aagtcttgtggtattcaatcaagactctttgtcatttttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcggtattc 37013999  T
Q  208 aagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 307  Q
    || ||||||||||||||||||| |||||| |||||||          |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  37014000 aaaatcattcaaatttcgaagggttgtttaataaatt----------ggattttgtagtataattttaacaagaaaaagtctttcataaaaagatgagat 37014089  T
Q  308 ttcttgagattggttttattttaaaagttactatc 342  Q
    |||||||||||| |||| |||||||||||||||||    
T  37014090 ttcttgagattgtttttcttttaaaagttactatc 37014124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 12 - 353
Target Start/End: Original strand, 13925821 - 13926172
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngt 111  Q
    |||||| ||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||||||||| |||||||||||||||||| ||       ||    
T  13925821 ggatgtgttggattaggattctataggattttaaaagattttttaattatgaaaaagtcttgtggtatttaatcaagactttttgcaacttaaaaaaagt 13925920  T
Q  112 cttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaaga 211  Q
     || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||       ||||||||||| |||| |    
T  13925921 tttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcattacttaaaaaaagtcttgtggtattcaaaa 13926020  T
Q  212 tcattcaaatttcgaaggattgtttgataaattgga----------ttttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaaga 301  Q
    ||||||||||||||||||||||||| ||||||||||          |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  13926021 tcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcaagaaaaga 13926120  T
Q  302 tgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||| |||||||||||||| |||| || ||||||||||||||| ||| |||||    
T  13926121 tgatatttcttgagattgtttttcttctaaaagttactatctctttcttctc 13926172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 11 - 324
Target Start/End: Original strand, 22746186 - 22746501
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| || |||||||||||||| ||       |    
T  22746186 gggatgtattggattaggattctatagaattttaaaagactttttaattatgaaaaagtcttgtggtattcgattaagactttttgcaacttaaaaaaag 22746285  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||       |||||||| || ||||     
T  22746286 tcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttgaggtattcaatcaaaacttttcatcacttaaaaaaagtcttgtgatattcaaa 22746385  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtag--tgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    ||||||||||||||||| |||||||| |||||||| ||||||  ||||||||| |  |||||||||||||||||||| |||||||||||||||| |||||    
T  22746386 atcattcaaatttcgaatgattgtttaataaattgaattttgatggattttgtgggatgtaattttaacaagaaaaactctttcatgaaaagataagatt 22746485  T
Q  309 tcttgagattggtttt 324  Q
    |||| |||||| ||||    
T  22746486 tcttaagattgttttt 22746501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 77 - 341
Target Start/End: Complemental strand, 1461389 - 1461125
Alignment:
Q  77 tattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactt 176  Q
    |||||||| |||||||||||||| ||       ||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  1461389 tattcaattaagactttttgcaacttaaaaatagtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagactt 1461290  T
Q  177 ttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaa 276  Q
    ||||||| ||       |||||| | || |||| |||||||||||||||||||||||||| |||||||||||||||  |||||||||| |||||||||||    
T  1461289 ttcatcacttaaaaaaagtcttgcgctattcaaaatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtactgtaattttaa 1461190  T
Q  277 caagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactat 341  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  1461189 caagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagttactat 1461125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 122 - 353
Target Start/End: Complemental strand, 7947779 - 7947538
Alignment:
Q  122 tcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaat 221  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||| | || |||| |||||||||||    
T  7947779 tcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgatattcaaaatcattcaaat 7947680  T
Q  222 ttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttct 311  Q
    ||||||||||||||| ||||||          |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  7947679 ttcgaaggattgtttaataaattggattttgatggattttgtggaattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagaagagatttct 7947580  T
Q  312 tgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||| |||| |||| |||||||||||| ||||| ||| |||||    
T  7947579 tgaaattgtttttcttttaaaagttaatatctctttcttctc 7947538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 121; E-Value: 7e-62
Query Start/End: Original strand, 149 - 343
Target Start/End: Original strand, 39852372 - 39852576
Alignment:
Q  149 aaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggat 248  Q
    |||||||||||||||||||||||||||| |||||||||       ||||||||||| |||| ||||||||||||||||||||||||||  ||||||||||    
T  39852372 aaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaagtcttgtggtattcaaaatcattcaaatttcgaaggattgtttactaaattggat 39852471  T
Q  249 tttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttac 338  Q
    ||||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  39852472 tttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttgttttaaaagttac 39852571  T
Q  339 tatct 343  Q
    |||||    
T  39852572 tatct 39852576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 21146960 - 21147267
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| ||||||| |||||||||||||||||||| ||| ||||||       |||||    
T  21146960 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcgtgtggtattcaatcaagactctttccaatttaaaaaaagtctt 21147059  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  21147060 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 21147159  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  21147160 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 21147259  T
Q  305 gatttctt 312  Q
    ||||||||    
T  21147260 gatttctt 21147267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 33656356 - 33656047
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||| || || ||||||||||| ||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  33656356 tgtattggatcatgattttaagggattttaaaagatttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 33656257  T
Q  115 atggtattcaattaaga--ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
     || |||||||| ||||  || |||||||||| |||||||||||| ||||||||||||||||| || |||| ||        |||  ||||| |||| ||    
T  33656256 gtgttattcaatcaagattctttttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaaatctaatggtattcaaaat 33656157  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    |||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||    
T  33656156 cattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaatat 33656057  T
Q  303 gagatttctt 312  Q
    ||||||||||    
T  33656056 gagatttctt 33656047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 40 - 312
Target Start/End: Original strand, 139191 - 139473
Alignment:
Q  40 ttttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgt 139  Q
    |||||||||||||||| || ||| ||||||||| | |||||||||||||||| ||| ||||||       || || || |||||||| |||| |||||||    
T  139191 ttttaaaagacttttttataatgaaaaagtcttttagtattcaatcaagactcttttcaatttaaaaaaagttttgtgttattcaatcaagattctttgt 139290  T
Q  140 cattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgat 239  Q
    ||||| ||||||||| || |||||||||||||||||||| |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| ||    
T  139291 catttaaaaaaagtcatgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaat 139390  T
Q  240 aaa----------ttggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||           |||||||||| |||||||  |||| |||||||| | ||||||||||||||| |||| ||||||||||||    
T  139391 aaaccagattttgatggattttgttggattttccagtgaaattttaatatgaaaaagtctttcataaaaacatgagatttctt 139473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 64 - 312
Target Start/End: Complemental strand, 5273183 - 5272925
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||| ||||||||||||| ||||||  ||||       ||||| || |||||||| |||| |||||||||||| |||||||||||  |||||    
T  5273183 aaaagtcttgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaagattctttgtcatttaaaaaaagtcttatggtat 5273084  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||||||| || |||||||       |||| |||||| |||| ||||||||||||||||| |||||||| ||||||          ||||||||||    
T  5273083 tcaatcaagactcttaatcatttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaatgattgtttaataaatcagattttgatggattttgt 5272984  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||||||||    
T  5272983 gggattttctagtgaaattttagcatgaaaaagtctttcataaaaacatgagatttctt 5272925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 28 - 312
Target Start/End: Complemental strand, 32158199 - 32157900
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt-nnnnnnngtcttatggtattcaat 126  Q
    ||||||| |||||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||        ||||| || ||||||||    
T  32158199 gattctaaggaattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaaagtcttgtgttattcaat 32158100  T
Q  127 taagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagatcattcaaatttcg 225  Q
     |||| |||||||||||| |||||||||||| ||||||||||||||||   | |||| ||        |||| |||||| |||| |||||||||||||||    
T  32158099 caagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacccctaatcacttaaaaaaaagtctagtggtattcaaaatcattcaaatttcg 32158000  T
Q  226 aaggattgtttgataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaa---agtctttcatgaaaagatgagatttctt 312  Q
    ||||||||||| |||||||          ||||||||||||||||| ||||  ||||||| || |||||   ||||||||||||||| ||||||||||||    
T  32157999 aaggattgtttaataaattagattttgacggattttgtgggattttctagtaaaattttagcacgaaaaaatagtctttcatgaaaacatgagatttctt 32157900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 262
Target Start/End: Original strand, 6460685 - 6460932
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||| || | ||||||| || ||||||||||| ||||| || ||| |||||||||||||||||||||||||||| ||| ||| ||       |||||    
T  6460685 tgtattgaatcatgattctaagggattttaaaagatttttttataatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaaaaagtctt 6460784  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
    ||| |||||||| |||| |||||||||||| ||||||||| ||  |||||||||||||||| || |||||||        ||| |||||| |||| ||||    
T  6460785 atgttattcaatcaagattctttgtcatttaaaaaaagtcatgtcgtattcaatcaagactcttaatcatttaaaaaaaatctagtggtattcaaaatca 6460884  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttg 262  Q
    ||||||||||||||| |||||| ||||||  |||||||  ||||||||    
T  6460885 ttcaaatttcgaaggtttgtttaataaatcagattttgatggattttg 6460932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 27459262 - 27458956
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | |||||||  | ||||||||| ||||||| || ||| |||||||| || |||||||||||||||| ||| ||||||       |||||    
T  27459262 tgtattggatcatgattctaacggattttaaaaaacttttttatcatgaaaaagtctcgtagtattcaatcaagactctttccaatttaaaaaaagtctt 27459163  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || ||||||||||||| |||||||||||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  27459162 gtgttattcaattaagattctttgtcatttaaaaaaagtcttgtagtattcaatcaagactcttaatcactt-aaaaaagtctagtggtattcaaaatca 27459064  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||| |||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||| || |||||||||| ||||    
T  27459063 ttcagattttgaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaaatcattcatgaaaacatga 27458964  T
Q  305 gatttctt 312  Q
     |||||||    
T  27458963 tatttctt 27458956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 67 - 312
Target Start/End: Complemental strand, 9220968 - 9220723
Alignment:
Q  67 agtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattca 166  Q
    |||| |||||||||||||||||||| ||||||| ||       ||| |||| |||||||| || ||||||||||||||  ||||||||||| | ||||||    
T  9220968 agtcgtgtggtattcaatcaagactatttgcaacttaaaaaaagtcatatgatattcaatcaaaactctttgtcatttagaaaaagtcttgtgatattca 9220869  T
Q  167 atcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagt 266  Q
    ||||||||| || |||| ||       ||||| || || |||| |||||||||||||| ||||||||||| || |||| || ||||| ||||||| ||||    
T  9220868 atcaagactctttatcacttaaaaaaagtcttatgatattcaaaatcattcaaatttctaaggattgtttaatgaattagaatttgtaggattttatagt 9220769  T
Q  267 gtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
      |||||||||| ||||||||||||| |||||| |||| |||||||    
T  9220768 aaaattttaacacgaaaaagtctttcgtgaaaacatgatatttctt 9220723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 110 - 312
Target Start/End: Complemental strand, 7016957 - 7016745
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| ||||||||||   |||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||| ||||    
T  7016957 gtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7016858  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| ||||    
T  7016857 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaa 7016758  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  7016757 catgagatttctt 7016745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 252
Target Start/End: Original strand, 9689554 - 9689787
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||||| ||||||| || ||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| ||| ||       ||| |    
T  9689554 tgtattggattatgattctaagggattttaatagacttttta-ttatgaaaaagtcttgtggtattcaatcaagactctttccaacttaaaagaagtcgt 9689652  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     ||||||||||| ||||||| |||||| |||||||||   | | ||||||||||||||||| ||||||| ||       ||||||||||| | || ||||    
T  9689653 ctggtattcaatcaagactc-ttgtca-tttaaaaaaacatcgtggtattcaatcaagactcttcatcacttaaaaaaagtcttgtggtatttaaaatca 9689750  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttg 252  Q
    || |||||||||| |||||||||||||||| |||||||    
T  9689751 tt-aaatttcgaatgattgtttgataaattagattttg 9689787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 99
Target Start/End: Complemental strand, 7948630 - 7948546
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa 99  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttattatgaaaaagtctcgtggtattcaatcaagactttttgcaa 7948546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 14465438 - 14465303
Alignment:
Q  117 ggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    |||||||||| ||||||||||||||||| |||||||| ||  ||||||||||||||||| ||||||  ||       ||||||||||| |||| ||||||    
T  14465438 ggtattcaatcaagactctttgtcatttaaaaaaagttttctggtattcaatcaagactcttcatcgcttaaaaaaagtcttgtggtattcaaaatcatt 14465339  T
Q  217 caaatttcgaaggattgtttgataaattggattttg 252  Q
    ||||||||||| |||||||| |||||| ||||||||    
T  14465338 caaatttcgaaagattgtttaataaatcggattttg 14465303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 7017010 - 7016858
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  7017010 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtctt 7016911  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
     | ||||||||| |||||||||  ||| || |||||||||| | |||||||||    
T  7016910 gtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 7016858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 147 - 299
Target Start/End: Original strand, 849172 - 849334
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat--- 243  Q
    ||||||||||| ||||||||||||||||| || |||| ||       ||||  ||||| |||| |||||||||||||||||||||||||| ||||||       
T  849172 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctaatggtattcaaaatcattcaaatttcgaaggattgtttaataaatcag 849271  T
Q  244 -------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
           | |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  849272 attttgatagattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 849334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 173
Target Start/End: Complemental strand, 5273275 - 5273116
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaag-tcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||| | |||| || || ||||||||||||||||| || ||| ||||  ||||||||||||||||||||| | ||| ||||||       ||||    
T  5273275 tgtattggatcatgattttaagggattttaaaagacttttttatcatgaaaaaaatcttgtggtattcaatcaagattctttccaatttaaaaaaagtct 5273176  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaaga 173  Q
    | || |||||||| |||| | |||||||||| |||||||||||| | |||||||||||||    
T  5273175 tgtgttattcaatcaagattttttgtcatttaaaaaaagtcttgtgctattcaatcaaga 5273116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 26806636 - 26806578
Alignment:
Q  36 ggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||||||||||||||    
T  26806636 ggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 43319139 - 43319216
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagact 91  Q
    |||||||||| | ||||||| || |||||||||||||||||  || ||| ||||||||||||||||||||||||||||    
T  43319139 tgtattggatcatgattctaagggattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagact 43319216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 26795690 - 26795635
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |||||  |||| ||||||||||||||||||||||||||    
T  26795690 attttaaaagacttttttattataaaaaaatcttgtggtattcaatcaagactttt 26795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 36 - 94
Target Start/End: Complemental strand, 26795572 - 26795514
Alignment:
Q  36 ggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||| ||||||| |||||  |||||||||||||||||||||||| ||||||    
T  26795572 ggaattttaaaaaactttttgattataaaaaagtcttgtggtattcaatcaaaactttt 26795514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 91
Target Start/End: Complemental strand, 1511641 - 1511589
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagact 91  Q
    |||||||||||| |||| |||||| |||||||||||||| |||||||||||||    
T  1511641 attttaaaagacatttttattatgaaaaagtcttgtggtgttcaatcaagact 1511589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 26806754 - 26806699
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||||||||||||||||    
T  26806754 attttaaaagacttttttattataaaaaaatcttgtgatattcaatcaagactttt 26806699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 82
Target Start/End: Original strand, 27786213 - 27786280
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattca 82  Q
    |||||||||||| ||||  | || ||||||||||||||||| |||||  |||||||||||||||||||    
T  27786213 tgtattggattaagatttcaagggattttaaaagacttttttattataaaaaagtcttgtggtattca 27786280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 136
Target Start/End: Complemental strand, 16894172 - 16894052
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| |  |||||| || ||||||||||||||||| || ||  |||| ||||||||||||||||||| | | ||| ||||||       |||||    
T  16894172 tgtattggatcataattctaagggattttaaaagacttttttatcat-aaaaattcttgtggtattcaatcaaaattctttccaatttaaaaaaagtctt 16894074  T
Q  115 atggtattcaattaagactctt 136  Q
     ||||||||||| |||||||||    
T  16894073 gtggtattcaatcaagactctt 16894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 28594500 - 28594444
Alignment:
Q  39 attttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  |||||  |||||||||||||||||||||||||| ||||    
T  28594500 attttaaaagactttttttattataaaaaagtcttgtggtattcaatcaagattttt 28594444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 1461357 - 1461257
Alignment:
Q  67 agtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattca 166  Q
    ||||||||||||||||||||||||| |||| |||||       |||||  |||||||||| |||||| ||  ||| || |||||||||||| | ||||||    
T  1461357 agtcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgcgctattca 1461258  T
Q  167 a 167  Q
    |    
T  1461257 a 1461257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 9689393 - 9689338
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| |||||||||||  |||| ||||| ||||||||||||||| ||||    
T  9689393 attttaaaagattttttaattataaaaaaatcttgaggtattcaatcaagattttt 9689338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 17518455 - 17518510
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  17518455 attttaaaagactttttcgttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 40410617 - 40410672
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  40410617 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 40410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 1511451 - 1511409
Alignment:
Q  219 aatttcgaaggattgtttgataaattggattttgtgggatttt 261  Q
    |||||||||| ||||||| ||| ||||||||||||||||||||    
T  1511451 aatttcgaagaattgtttaatagattggattttgtgggatttt 1511409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 7857052 - 7857102
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||||||||||  |||| ||||| ||||| |||||||||||||||    
T  7857052 attttaaaagactttttggttatagaaaaatcttgaggtattcaatcaaga 7857102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Complemental strand, 14465486 - 14465422
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| |||||||||||||| |||||||   |||| ||||||||| || |||||||||||||||||    
T  14465486 gtcttgtggtattcaattaaaactctttccaatttaaaaaaagtc-tggggtattcaatcaagact 14465422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 178
Target Start/End: Complemental strand, 26806611 - 26806578
Alignment:
Q  145 taaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||| ||||||||||||||||||||    
T  26806611 taaaaaagtcttgtggtattcaatcaagactttt 26806578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 111 - 175
Target Start/End: Complemental strand, 16894119 - 16894055
Alignment:
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    |||| ||||||||||| || | |||||   |||| |||||||||||| |||||||||||||||||    
T  16894119 tcttgtggtattcaatcaaaattctttccaatttaaaaaaagtcttgtggtattcaatcaagact 16894055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 17518474 - 17518510
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  17518474 ttttaaaaaagtcttgtggtattcaatcaagattttt 17518510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 218; Significance: 1e-120; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 16 - 339
Target Start/End: Complemental strand, 28740598 - 28740275
Alignment:
Q  16 gtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctta 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||| ||       |||||     
T  28740598 gtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaaaactttttgcaacttaaaaaaagtcttg 28740499  T
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| |||| |||||    
T  28740498 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaaatcat 28740399  T
Q  216 tcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgag 315  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  28740398 tcaaatttcgaaggattgtttaataaattggattttgatggattttgtggtgtaattttaacaagaaaaagtctttcataaaaagatgagatttcttgag 28740299  T
Q  316 attggttttattttaaaagttact 339  Q
    |||| |||| ||||||||||||||    
T  28740298 attgtttttcttttaaaagttact 28740275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 354
Target Start/End: Original strand, 26788674 - 26789026
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       |    
T  26788674 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaag 26788773  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatt--tnnnnnnngtcttgtggtactca 208  Q
    |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          ||||||||||| |||    
T  26788774 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcattcaaaaaaaaagtcttgtggtattca 26788873  T
Q  209 agatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | ||||||||||||| |||||||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||   |    
T  26788874 aaatcattcaaattttgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat---a 26788970  T
Q  299 agatgagatttcttgagattggttttattttaaaagttactatctttttattctca 354  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||    
T  26788971 agatgagatttcttgagattgtttttattttaaaagttactatctttttcttctca 26789026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 28844445 - 28844797
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  28844445 gggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 28844544  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  28844545 tcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 28844644  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          |||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||    
T  28844645 atcattcaaatttcgaaggattgtttaataaattagattttgatggattttgtggaattttgtagtgtaattttaataagaaaaagtctttcataaaaag 28844744  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||| ||||| ||| |||||    
T  28844745 atgagatttcttgagattgtttttcttttaaaagttagtatctatttcttctc 28844797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 11 - 343
Target Start/End: Original strand, 3463561 - 3463894
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||||| |||||||||  |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||       |    
T  3463561 gggatgtattggattatgattctatgagattttaaaagactttttaattatgaaaaaatcttgtggtattcaatcaagactttttgcaatttaaaaaaag 3463660  T
Q  111 tcttatggtattcaattaaga-ctctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||||  |||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||       ||||||||||| | ||    
T  3463661 tcttataatattcaatcaagaactctttgtcattttaaaaaagtcttgaggtgttcaatcaagacttttcatcatttaaaaaaagtcttgtggtatttaa 3463760  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||||||| |||| ||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3463761 aatcattcaattttcaaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaatatgagattt 3463860  T
Q  310 cttgagattggttttattttaaaagttactatct 343  Q
    |||||||||| |||| ||||||||||||||||||    
T  3463861 cttgagattgtttttgttttaaaagttactatct 3463894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 11 - 352
Target Start/End: Complemental strand, 13833742 - 13833401
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||  ||||||||||| |||||| ||||||||||||||||||||||||||||| ||       |    
T  13833742 gggatgtattggattaggattctatgagattttaaaagatattttaattatgaaaaagtattgtggtattcaatcaagactttttgcaacttaaaaaaag 13833643  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||| ||| ||||||||||||||||||||  ||||||||||||||||||||||| ||       ||||| ||||| ||||     
T  13833642 tcttgtggtattcaatcaagactttttatcattttaaaaaagtcttgatatattcaatcaagacttttcatcacttaaaaaaagtcttctggtattcaaa 13833543  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  13833542 atcattcaaattttgaaggattgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgacaagatgagatttc 13833443  T
Q  311 ttgagattggttttattttaaaagttactatctttttattct 352  Q
    ||||||||| |||| |||||||| ||||||||| ||| ||||    
T  13833442 ttgagattgcttttcttttaaaaattactatctctttcttct 13833401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 33135513 - 33135864
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||       |    
T  33135513 gggatgtattggattaggattctataggattttaaaagactttttaattatgaaaaagtcttatggtattcaatcaagactttttgcaatttaaaaaaag 33135612  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||       |||| |||||| ||||     
T  33135613 tattgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaa 33135712  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    |||||||||||||||||||||||||| ||||||          ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||     
T  33135713 atcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcat-aaaaa 33135811  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||| |||| |||||||||||| ||||| ||| |||||    
T  33135812 atgagatttcttgagattgtttttcttttaaaagttattatctctttcttctc 33135864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 11 - 292
Target Start/End: Original strand, 7026493 - 7026775
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaa-gtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||           
T  7026493 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaa 7026592  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||    
T  7026593 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaa 7026692  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttc 292  Q
     |||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  7026693 aatcattcaaatttcgaaggattgtttaataaattggattttgatggattttgtagtgtaattttaacaagaaaaagtctttc 7026775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 11 - 353
Target Start/End: Complemental strand, 215545 - 215206
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  215545 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 215446  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| ||       |||| |||||| ||||     
T  215445 tcttgtggtattcaatcaagactctttgtcaattttaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtctcgtggtattcaaa 215346  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||| ||| ||||||||||||||   ||  | |   | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  215345 atcattcaaacttcaaaggattgtttgattgttt--aataaattggattttgtagtgtaattttaac-agaaaaagtctttcatgaaaagatgagatttc 215249  T
Q  311 ttgagattggttttattttaaaagttactatctttttattctc 353  Q
     |||||||| |||| |||||||||||||||||| ||| |||||    
T  215248 atgagattgtttttcttttaaaagttactatctctttcttctc 215206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 11 - 353
Target Start/End: Original strand, 10657296 - 10657648
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||| ||||||||||| |||||||| ||||||||| ||||| ||||||| ||||||||||||||||| ||||||| || ||       |    
T  10657296 gggatgtattggatttggattctatgggattttaaatgactttttagttatgaaaaagtcgtgtggtattcaatcaaggctttttgaaacttaaaaaaag 10657395  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||| ||||     
T  10657396 tcttgtggtattcaatcaagatcctttgtcattttaaaaaagttttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaaa 10657495  T
Q  211 atcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaag 300  Q
    ||||||||||||||||| |||||||| ||||||          |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10657496 atcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtatttcatgaaaag 10657595  T
Q  301 atgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    |||| |||||||||||||| |||| ||||||||| |||||||| ||| |||||    
T  10657596 atgaaatttcttgagattgtttttcttttaaaaggtactatctctttcttctc 10657648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 156; E-Value: 9e-83
Query Start/End: Original strand, 14 - 353
Target Start/End: Complemental strand, 6224865 - 6224535
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    ||||||| ||||||||||||||  ||||||||||  ||||||||||||| |||||| |||||||||| |||||||| ||||||||| ||       |||     
T  6224865 atgtattagattaggattctataaaattttaaaaagctttttaattatgaaaaagttttgtggtattgaatcaagattttttgcaaattaaaaaaagtca 6224766  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagat 212  Q
    | ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||       ||||||||||| |||| ||    
T  6224765 tgtggtatttaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagatttttcatcactttaaaaaaagtcttgtggtattcaaaat 6224666  T
Q  213 cattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
     ||||||||||||||||||| ||| ||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6224665 tattcaaatttcgaaggattatttaataaattggattttgt----------agtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 6224576  T
Q  313 gagattggttttattttaaaagttactatctttttattctc 353  Q
    || |||| |||| |||||||||||||||||| ||| |||||    
T  6224575 gatattgtttttcttttaaaagttactatctctttcttctc 6224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 11 - 333
Target Start/End: Original strand, 3574737 - 3575049
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||       |    
T  3574737 gggatgtgttggattagaattctatggaattttaaaagactttttaattatgaaaaagttttgtggtattcaatcaagactttttgcaacttaaaaaaag 3574836  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    | || ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||| ||       |||||||| || ||||     
T  3574837 ttttgtggtattcaatcaagactaattgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtgatattcaaa 3574936  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttc 310  Q
    |||||||||||||||||||||||||| |||||||          ||||||||||||||||||||||||| ||||| | |||| | ||||| |||||||||    
T  3574937 atcattcaaatttcgaaggattgtttaataaatt----------ggattttgtagtgtaattttaacaaaaaaaaatatttcgtaaaaagttgagatttc 3575026  T
Q  311 ttgagattggttttattttaaaa 333  Q
    ||||||||| |||| ||||||||    
T  3575027 ttgagattgtttttcttttaaaa 3575049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 119 - 345
Target Start/End: Original strand, 18177265 - 18177501
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattca 218  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       || |||||||| |||| ||||||||    
T  18177265 tattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagttttgtggtattcaaaatcattca 18177364  T
Q  219 aatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatt 308  Q
    |||||||||||||||||| || |||          |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||    
T  18177365 aatttcgaaggattgtttaattaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttaataaaaagatgagatt 18177464  T
Q  309 tcttgagattggttttattttaaaagttactatcttt 345  Q
    ||||||||||| |||||||||||||||||||||||||    
T  18177465 tcttgagattgtttttattttaaaagttactatcttt 18177501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 10 - 336
Target Start/End: Complemental strand, 10125613 - 10125285
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    ||||||||||| |||||| |||||| |  ||||||||||| |||||||||||| |||||||| |||  |||||||||||||| ||||||||||           
T  10125613 agggatgtattcgattagaattctaagagattttaaaagattttttaattatgaaaaagtctcgtgacattcaatcaagactctttgcaatttaaaaaaa 10125514  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtctt--gaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactc 207  Q
    || || ||||||||||| |||||||||||||||||||||||||||||  ||| ||||||||||| ||||||||||| ||       ||||  || || ||    
T  10125513 gttttgtggtattcaatcaagactctttgtcattttaaaaaagtcttttgagatattcaatcaaaacttttcatcacttaaaaaaagtctcatgatattc 10125414  T
Q  208 aagatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagat 307  Q
    || |||||||||||||| ||||||||||| |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||| |||| | |||||    
T  10125413 aaaatcattcaaatttcaaaggattgtttaataaattgaattttgtgggattttttagtgaaattttaacaagaaaaagtctttcataaaaacacgagat 10125314  T
Q  308 ttcttgagattggttttattttaaaagtt 336  Q
    ||||| |||||| |||| |||||||||||    
T  10125313 ttcttaagattgtttttcttttaaaagtt 10125285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 116 - 341
Target Start/End: Original strand, 25288154 - 25288389
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||        |||||||||| |||| |||||    
T  25288154 tggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcattcaagacttttcatcacttaaaaaaaatcttgtggtattcaaaatcat 25288253  T
Q  216 tcaaatttcgaaggattgtttgataaattggattt----------tgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    ||||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  25288254 tcaaatttcgaaggattgtttaataaattggattttgatgaattttgtgggattttgtagtgtaattttaacaagagaacgtctttcatgaaaagatgag 25288353  T
Q  306 atttcttgagattggttttattttaaaagttactat 341  Q
    |||||||||||||| |||| ||||||||||||||||    
T  25288354 atttcttgagattgtttttcttttaaaagttactat 25288389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 10 - 312
Target Start/End: Original strand, 16269580 - 16269892
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||| |||||||||| | ||||||| || ||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||| ||||||           
T  16269580 aggggtgtattggatcatgattctaagggattttaaaagacttttttattatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 16269679  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| ||||    
T  16269680 gtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 16269779  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||||||||    
T  16269780 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttatagtgaaattttagcatgaaaaagtctttcatgaaaa 16269879  T
Q  300 gatgagatttctt 312  Q
     ||||||||||||    
T  16269880 catgagatttctt 16269892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 24776249 - 24776556
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||  |||||       |||||    
T  24776249 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaatttaaaaaaagtctt 24776348  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  24776349 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 24776448  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  24776449 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 24776548  T
Q  305 gatttctt 312  Q
    ||||||||    
T  24776549 gatttctt 24776556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 31170940 - 31170633
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||| ||||||||||||||| ||| ||||||       |||||    
T  31170940 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtgatattcaatcaagactctttccaatttaaaaaaagtctt 31170841  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  31170840 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 31170741  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||| ||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  31170740 ttcaaatttccaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatga 31170641  T
Q  305 gatttctt 312  Q
    ||||||||    
T  31170640 gatttctt 31170633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 324
Target Start/End: Original strand, 12407274 - 12407593
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| |  ||||||||||||||||| || ||| |||||||||||||||||||||||||| | ||| ||||||       |||||    
T  12407274 tgtattggatcatgattctaagagattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattcttttcaattttaaaaaagtctt 12407373  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| |||||| |||| ||||    
T  12407374 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 12407473  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||    
T  12407474 ttcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttaccatgaaaaagtctttcatgaaaacatga 12407573  T
Q  305 gatttcttgagattggtttt 324  Q
    |||||||| |||||| ||||    
T  12407574 gatttcttaagattgttttt 12407593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 111; E-Value: 7e-56
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 22552079 - 22551772
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||| ||||||       |||||    
T  22552079 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagattttttccaatttaaaaaaagtctt 22551980  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||||| |||| ||       |||| |||||| |||| || |    
T  22551979 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagacttttaatcacttaaaaaaagtctagtggtattcaaaatta 22551880  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    ||||||||||||| ||||||||  |||||          |||||||||||||||||| ||||| ||||||| || |||||||| ||||||||||| ||||    
T  22551879 ttcaaatttcgaatgattgtttattaaattaaattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtatttcatgaaaacatga 22551780  T
Q  305 gatttctt 312  Q
    ||||||||    
T  22551779 gatttctt 22551772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 110 - 353
Target Start/End: Original strand, 378926 - 379169
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||| ||||  | || |||||||||||| ||||||||||||| ||||||  ||||||       || |  ||||| ||||    
T  378926 gtcttgtggtattcaatcaagactttttgcaacttaaaaaaagtcttgtggtattcaatcaaaactttttctcatttaaaaaaagtttcatggtattcaa 379025  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     ||||||||||||| |||||||||||| |||||||||||||||   |||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  379026 aatcattcaaattttgaaggattgtttaataaattggattttgatagattttgtagtgtaattttaacaagaaaaaatcgttcatgaaaagatgagattt 379125  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctc 353  Q
     ||||||||| |||| |||||||| ||||||||| ||| |||||    
T  379126 attgagattgtttttcttttaaaacttactatctctttcttctc 379169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 14198892 - 14198586
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||||||| |||  |||||       |||||    
T  14198892 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttctaattt-aaaaaagtctt 14198794  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| || | |||||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||  |||||| |||| ||||    
T  14198793 gtgttattcaatcaaaattctttgtcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtccagtggtattcaaaatca 14198694  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| ||||| ||||||| || |||||| ||||||||||||| ||||    
T  14198693 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaattctttcatgaaaacatga 14198594  T
Q  305 gatttctt 312  Q
    ||||||||    
T  14198593 gatttctt 14198586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 64 - 312
Target Start/End: Original strand, 20605179 - 20605437
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||||| |||||||||||| |||||    
T  20605179 aaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtat 20605278  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||||||| || |||| ||       |||| |||||| |||| |||||| ||||||||||||||||||| ||||||          ||||||||||    
T  20605279 tcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattaaaatttcgaaggattgtttaataaatcagattttgatggattttgt 20605378  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  20605379 gggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 20605437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 10 - 312
Target Start/End: Original strand, 35316951 - 35317263
Alignment:
Q  10 agggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn 109  Q
    |||| ||||||| || | ||||||| || ||||||||| ||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||           
T  35316951 aggggtgtattgaatcatgattctaagggattttaaaaaacttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaa 35317050  T
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    || || || |||||||| |||| |||||||||||| ||||||||||||   ||||||||||||||| || |||| ||       |||| |||||| ||||    
T  35317051 gttttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtaatattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaa 35317150  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     |||||||||||||||||||||||||| ||||||          |||||||||||| ||||| ||||| ||||||| || ||||||||||||||||||||    
T  35317151 aatcattcaaatttcgaaggattgtttaataaatcagattttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctttcatgaaaa 35317250  T
Q  300 gatgagatttctt 312  Q
     || |||||||||    
T  35317251 cataagatttctt 35317263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 39 - 312
Target Start/End: Original strand, 32125168 - 32125454
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| || ||| |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| || | ||||||    
T  32125168 attttaaaagacttttttataatgaaaaagtcttgtggtattcaatcaagactcttttcaatttaaaaaaagtcttgtgttattcaatcaaaattctttg 32125267  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttt---tcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtt 235  Q
    |||||| ||||||||| || ||||||||||||||||| |   | |||||||       |||  |||||| |||| |||||||||||||||||||||||||    
T  32125268 tcatttaaaaaaagtcatgtggtattcaatcaagactcttaatgatcatttaaaaaaagtcaagtggtattcaaaatcattcaaatttcgaaggattgtt 32125367  T
Q  236 tgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    | ||||||          |||||||||||||||||| ||||  ||||||| || |||||||||||||||||||| ||||||||||||    
T  32125368 taataaatcagattttgatggattttgtgggattttctagtaaaattttagcatgaaaaagtctttcatgaaaatatgagatttctt 32125454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 44765669 - 44765917
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  44765669 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtctt 44765768  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| ||||||||||| ||||| || |||| ||       |||| |||||| |||| ||||    
T  44765769 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcgagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 44765868  T
Q  215 ttcaaatttcgaaggattgtttgataaattggattttgtgggattttgt 263  Q
    ||||||||||||| |||||||| ||||||  |||||||  |||||||||    
T  44765869 ttcaaatttcgaaagattgtttaataaataagattttgatggattttgt 44765917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 15 - 312
Target Start/End: Complemental strand, 305783 - 305474
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagacttttta-attatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnn-gtc 112  Q
    |||||||||| | ||||||| |  |||||||||||||||||  || ||| |||||||||||||||||||||||||||| ||| ||||||        |||    
T  305783 tgtattggatcatgattctaagcgattttaaaagactttttttatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaaagtc 305684  T
Q  113 ttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagat 212  Q
    || || |||||||| |||| | |||||||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||    
T  305683 ttgtgttattcaatcaagattatttgtcatttgaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaat 305584  T
Q  213 cattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagat 302  Q
    ||||||||||| ||| |||||||| ||||||          ||||||||||| |||||| ||||| |||||||  | |||||||||||||||||||| ||    
T  305583 cattcaaattttgaatgattgtttaataaatcagatttcgatggattttgtgagattttctagtgaaattttagaatgaaaaagtctttcatgaaaacat 305484  T
Q  303 gagatttctt 312  Q
    ||||||||||    
T  305483 gagatttctt 305474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 15 - 175
Target Start/End: Original strand, 20605046 - 20605206
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || |||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||||       |||||    
T  20605046 tgtattggatcatgattctaagggattttaaaagactttttaatcatgaaaaagtcttgtggtattcaatcaagactctttccaatttaaaaaaagtctt 20605145  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||||||||||||||||    
T  20605146 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaatcaagact 20605206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 39 - 312
Target Start/End: Original strand, 43847564 - 43847847
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| ||  || ||||||||| | |||||||| ||| ||| ||| ||||||       ||||| || |||||||| |||| ||||||    
T  43847564 attttaaaagacttttttatcgtgaaaaagtcttctagtattcaagcaaaactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttg 43847663  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||| |||||||||||| ||||||||||||||||| || |||| ||       |||| || ||| |||| |||||||||||||||||||||||||| |    
T  43847664 tcatttaaaaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagttgtattcaaaatcattcaaatttcgaaggattgtttaa 43847763  T
Q  239 taaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    |||||          |||||||||||| ||||| ||||| ||||||| || |||||||||| ||||||||| ||||||||||||    
T  43847764 taaatcagaatttgatggattttgtggaattttctagtgaaattttagcatgaaaaagtctgtcatgaaaacatgagatttctt 43847847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 15 - 299
Target Start/End: Original strand, 1789336 - 1789630
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| |  ||||||||||| ||||| || ||  |||||||||||||||||||||||| ||| ||| ||||||       |||||    
T  1789336 tgtattggatcatgattctaagagattttaaaagatttttttatcataaaaaagtcttgtggtattcaatcaaaactctttccaatttaaaaaaagtctt 1789435  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||  | ||||||||||| ||| || |||| ||       |||| |||||| |||| ||||    
T  1789436 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttatgatattcaatcaaaactcttaatcacttaaaaaaagtctagtggtattcaaaatca 1789535  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
    |||||||||||||||||||||| ||||||          |||||||||||||||||| || || ||||||| || ||||||||||||||| ||||    
T  1789536 ttcaaatttcgaaggattgtttaataaatcagattttgatggattttgtgggattttctaatgaaattttagcatgaaaaagtctttcatcaaaa 1789630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 69 - 312
Target Start/End: Complemental strand, 5093309 - 5093056
Alignment:
Q  69 tcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaat 168  Q
    ||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||||| |||||||||||| ||||||||||    
T  5093309 tcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtattcaat 5093210  T
Q  169 caagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggat 258  Q
    ||||||  || |||| ||       |||| || ||| |||| ||||||||||||| |||||||||||| ||||||          |||||||||||||||    
T  5093209 caagacgcttaatcacttaaaaaaagtctagtagtattcaaaatcattcaaattttgaaggattgtttaataaatcagattttgatggattttgtgggat 5093110  T
Q  259 tttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||| || || ||||||| || ||||||||||||||| |||| ||||||||||||    
T  5093109 tttctaatgaaattttagcatgaaaaagtctttcataaaaacatgagatttctt 5093056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 39 - 278
Target Start/End: Complemental strand, 26601492 - 26601253
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttg 138  Q
    ||||||||||||||||| |||||  |||||||||||||||||||||||| ||| |||  |||||       || || || |||| ||| |||||||||||    
T  26601492 attttaaaagacttttttattattaaaaagtcttgtggtattcaatcaaaactctttctaatttaaaaaaagttttgtgttatttaatcaagactctttg 26601393  T
Q  139 tcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttga 238  Q
    |||||  ||||||||||||  |||||||||||||||| || |||| ||       |||  |||||| |||| ||||||||||||||||| | |||||| |    
T  26601392 tcattaaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtcacgtggtattcaaaatcattcaaatttcgaatgtttgtttaa 26601293  T
Q  239 taaattggattttgtgggattttgtagtgtaattttaaca 278  Q
    |||||  |||||||||||||||| ||||| || |||||||    
T  26601292 taaatcagattttgtgggattttctagtgaaactttaaca 26601253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 43078696 - 43078805
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||| |||||||||||||||| |||| |||||||||||| |||||    
T  43078696 tggattttgtgggattttatagtgtaattttaacatgaaaaagtctttcataaaaagataagatttcttgagattgtttttgttttaaaagttagtatct 43078795  T
Q  344 ttttattctc 353  Q
     ||| |||||    
T  43078796 ctttcttctc 43078805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 378869 - 379011
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    |||||||||||||| | |||| || || |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||       |    
T  378869 gggatgtattggatcatgattataagggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaacttaaaaaaag 378968  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagt 153  Q
    |||| ||||||||||| || ||| ||| |||||| ||||||||    
T  378969 tcttgtggtattcaatcaaaactttttctcatttaaaaaaagt 379011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 12 - 96
Target Start/End: Original strand, 43078566 - 43078650
Alignment:
Q  12 ggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||    
T  43078566 ggatgtattggattaggattctatgggattttaaaagactttttgattatgaaaaagtcttgtggtattcaatcaagattttttg 43078650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 275 - 353
Target Start/End: Original strand, 7027051 - 7027129
Alignment:
Q  275 aacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  7027051 aacaagaaaaaatctttcatgaaaagatgagatttcttgagattgtttttattttaaaagttactatctttttcttctc 7027129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 15 - 102
Target Start/End: Original strand, 9120062 - 9120149
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaattt 102  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| |||| || |||||||||||||||||||| ||| ||||||    
T  9120062 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaaatcatgtggtattcaatcaagactctttccaattt 9120149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 14 - 77
Target Start/End: Original strand, 43825084 - 43825147
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggt 77  Q
    ||||||||||||| |||||||||  ||||||||||| |||||||||||| ||||||||||||||    
T  43825084 atgtattggattatgattctatgagattttaaaagattttttaattatgaaaaagtcttgtggt 43825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 116 - 312
Target Start/End: Original strand, 9120121 - 9120327
Alignment:
Q  116 tggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcat 215  Q
    ||||||||||| ||||||||||   ||||||||||||||||| | ||||||||||||| | || |||| ||        ||| ||| || |||| |||||    
T  9120121 tggtattcaatcaagactctttccaattttaaaaaagtcttgtgttattcaatcaagattcttaatcacttaaaaaaaatctagtgatattcaaaatcat 9120220  T
Q  216 tcaaatttcgaaggattgtttgataaatt----------ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgag 305  Q
    ||| ||||  ||||||||||| |||||||          ||||||||||||||||| ||||| |||||||  | | |||| ||||||||||||| |||||    
T  9120221 tcagattttaaaggattgtttaataaattagattttgatggattttgtgggattttctagtgaaattttagtatggaaaaatctttcatgaaaacatgag 9120320  T
Q  306 atttctt 312  Q
    |||||||    
T  9120321 atttctt 9120327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 194 - 250
Target Start/End: Complemental strand, 21370687 - 21370631
Alignment:
Q  194 gtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattggattt 250  Q
    ||||||||||| |||| ||||||||||||| |||| |||||||||||||||||||||    
T  21370687 gtcttgtggtattcaaaatcattcaaattttgaagtattgtttgataaattggattt 21370631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 177
Target Start/End: Original strand, 19144918 - 19145082
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    ||||||||| || ||||||| || ||||||||| | ||||| || ||  |||||||||||||||||||||||| |||  || ||| ||        ||||    
T  19144918 tgtattggaatatgattctaagggattttaaaatatttttttatcataaaaaagtcttgtggtattcaatcaaaactcatttcaa-ttaaaaaaaatctt 19145016  T
Q  115 atggtattcaattaag---actctttgtcattttaaaaaagtcttgaggtattcaatcaagacttt 177  Q
     ||||||||||| |||   ||||||| |||||| ||||||| |||| |||||||||||||||||||    
T  19145017 gtggtattcaatcaagagtactctttatcatttaaaaaaagacttgtggtattcaatcaagacttt 19145082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 2288488 - 2288541
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||||||||| |||||  |||||||| ||||||||||||||||||||||    
T  2288488 attttaaaagacttttttattat--aaaagtctagtggtattcaatcaagactttt 2288541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 3858267 - 3858188
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||| |||| |||| || || |||||||||||||||||||| ||  |||| | || |||||||||||||||||||||    
T  3858267 tgtattgaattaagattttaagggattttaaaagactttttaatgataaaaaacttttttggtattcaatcaagactttt 3858188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 39 - 94
Target Start/End: Complemental strand, 18176526 - 18176471
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| |||||||| ||  |||| ||||||||||||||||||||||||||    
T  18176526 attttaaaagattttttaataataaaaaaatcttgtggtattcaatcaagactttt 18176471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 37 - 94
Target Start/End: Original strand, 45546956 - 45547013
Alignment:
Q  37 gaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  45546956 gaattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 45547013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 11534881 - 11534917
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  11534881 ttttaaaaaagtctttaggtattcaatcaagactttt 11534917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 34028971 - 34028935
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34028971 ttttaaaaaagtctttaggtattcaatcaagactttt 34028935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 43078653 - 43078693
Alignment:
Q  211 atcattcaaatttcgaaggattgtttgataaattggatttt 251  Q
    ||||||||||||||||| |||||||| ||||||||||||||    
T  43078653 atcattcaaatttcgaatgattgtttaataaattggatttt 43078693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 29940972 - 29941027
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  29940972 attttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 29941027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 39 - 94
Target Start/End: Original strand, 37981649 - 37981704
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||| |||| ||||| ||||| |||||||| |||||||||||||||| ||||||    
T  37981649 attttagaagattttttgattatagaaaagtcatgtggtattcaatcaaaactttt 37981704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 2372996 - 2373046
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||||||||||  |||| ||||| ||||| |||||||||||||||    
T  2372996 attttaaaagacttttttgttatagaaaaatcttgaggtattcaatcaaga 2373046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Complemental strand, 20157795 - 20157759
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    ||||||| ||||||| |||||||||||||||||||||    
T  20157795 ttttaaagaagtctttaggtattcaatcaagactttt 20157759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 142 - 178
Target Start/End: Original strand, 24193595 - 24193631
Alignment:
Q  142 ttttaaaaaagtcttgaggtattcaatcaagactttt 178  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  24193595 ttttaaaaaagtcttggggtattcaatcaagattttt 24193631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 39698654 - 39698598
Alignment:
Q  39 attttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagacttttt 95  Q
    ||||||||| ||||||||| |||  || | |||||||||||||||||||||| ||||    
T  39698654 attttaaaaaactttttaactataaaacaatcttgtggtattcaatcaagacatttt 39698598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 14 - 343
Target Start/End: Original strand, 10452 - 10791
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||       ||||    
T  10452 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaatttaaaaaaagtct 10551  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatc 213  Q
    | ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||        |||||||||| |||| |||    
T  10552 tgtggtattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttctcatcatttaaaaaaaatcttgtggtattcaaaatc 10651  T
Q  214 attcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    ||||||||||| ||||||||||| ||||||          |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10652 attcaaatttcaaaggattgtttaataaattgaattttgatggattttatgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 10751  T
Q  304 agatttcttgagattggttttattttaaaagttactatct 343  Q
    |||||||||||||||| |||| ||||||||||||||||||    
T  10752 agatttcttgagattgtttttgttttaaaagttactatct 10791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 174; Significance: 2e-93; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 14 - 353
Target Start/End: Original strand, 755 - 1101
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtct 113  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| ||       ||||    
T  755 atgtattggattaggattctatgggattttaaaagactttttaattatgaaaaattcttgtggtattcaatcaagactttttgcaacttaaaaaaagtct 854  T
Q  114 tatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatca-tttnnnnnnngtcttgtggtactcaagat 212  Q
    | ||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||        ||||||||||| |||| ||    
T  855 tgtggtattcaatcaagactctttgtcattttaaaaaaatcatgaggtattcaatcaagacttttcatcacttaaaaaaaagtcttgtggtattcaaaat 954  T
Q  213 cattcaaatttcgaaggattgtttgataaat---------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatg 303  Q
    |||||||||||||||| ||| ||| ||||||         |||||||||||||||||||||||||||||||||| |||||||||||||||| |||| |||    
T  955 cattcaaatttcgaagaattatttaataaatagattttgatggattttgtgggattttgtagtgtaattttaactagaaaaagtctttcattaaaatatg 1054  T
Q  304 agatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||   || |||||||||||||||||| ||| |||||    
T  1055 agatttcttgagattg---tttttttaaaagttactatctctttcttctc 1101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 159; Significance: 2e-84; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 28 - 353
Target Start/End: Complemental strand, 39918 - 39583
Alignment:
Q  28 gattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaatt 127  Q
    |||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||| ||       || || |||||||||||     
T  39918 gattctatgagattttaaaagaccttttaattatgaaaaagtcttgtggtattcaatcaagactttttacaacttaaaaaaagttttgtggtattcaatc 39819  T
Q  128 aagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaa 227  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||| ||||||||| ||       ||| ||||||| |||| |||||||||| ||||||    
T  39818 aagactctttgtcatttttaaaaagtcttgaactattcaatcaagatttttcatcacttaaaaaatgtcatgtggtattcaaaatcattcaaacttcgaa 39719  T
Q  228 ggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagat 317  Q
    ||||| ||| |||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39718 ggattatttaataaattggattttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagat 39619  T
Q  318 tggttttattttaaaagttactatctttttattctc 353  Q
    || |||| |||||||||||||||||| ||| |||||    
T  39618 tgtttttcttttaaaagttactatctctttcttctc 39583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0922 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 11 - 252
Target Start/End: Original strand, 4089 - 4330
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||       |    
T  4089 gggatgtattggattaggattctataggattttaaaagactttttaattttgaaaaagtcttgtggtattcaatcaagactttttgcaaattaaaaaaag 4188  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaag 210  Q
    |||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||| ||||     
T  4189 tcttgtggtattcaatcaagactctttgtaattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttaaaaaaagtcttgtggtattcaaa 4288  T
Q  211 atcattcaaatttcgaaggattgtttgataaattggattttg 252  Q
    ||||||||||||| |||||||||||| |||||||||||||||    
T  4289 atcattcaaattttgaaggattgtttaataaattggattttg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 152; Significance: 2e-80; HSPs: 2)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 110 - 354
Target Start/End: Original strand, 13870 - 14114
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||| ||||    
T  13870 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     |||||||||||||| || |||||||| |||||||||||||||  |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  13970 aatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagattt 14069  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctca 354  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||||    
T  14070 cttgagattgtttttcttttaaaagttactatctctttcttctca 14114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 13813 - 13969
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||       |    
T  13813 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 13912  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    | ||  |||||||||| |||||| ||  ||| || |||||||||||| |||||||||    
T  13913 tattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 13969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 152; Significance: 2e-80; HSPs: 3)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 110 - 354
Target Start/End: Complemental strand, 21457 - 21213
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||       ||||||||||| ||||    
T  21457 gtcttgtggtattcaatcaagactctttgtcattttaaaaaagtattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T
Q  210 gatcattcaaatttcgaaggattgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagattt 309  Q
     |||||||||||||| || |||||||| |||||||||||||||  |||||||||||||  ||||||| ||||||||||||||||||||||||||||||||    
T  21357 aatcattcaaatttcaaaagattgtttaataaattggattttgatggattttgtagtgggattttaataagaaaaagtctttcatgaaaagatgagattt 21258  T
Q  310 cttgagattggttttattttaaaagttactatctttttattctca 354  Q
    |||||||||| |||| |||||||||||||||||| ||| ||||||    
T  21257 cttgagattgtttttcttttaaaagttactatctctttcttctca 21213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 238 - 354
Target Start/End: Original strand, 28467 - 28584
Alignment:
Q  238 ataaattggattttgtgggattttg-tagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagtt 336  Q
    |||||||||||||||  |||||||| |||||  ||||||| |||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||    
T  28467 ataaattggattttgatggattttggtagtgggattttaataagaaaaagtctttcatgaaaagatgagatttcttgagattgtttttcttttaaaagtt 28566  T
Q  337 actatctttttattctca 354  Q
    ||||||| ||| ||||||    
T  28567 actatctctttcttctca 28584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 21514 - 21358
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnng 110  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||  ||||       |    
T  21514 gggatgtattggattaggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaag 21415  T
Q  111 tcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    | ||  |||||||||| |||||| ||  ||| || |||||||||||| |||||||||    
T  21414 tattgaggtattcaatcaagacttttcatcacttaaaaaaagtcttgtggtattcaa 21358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 103; Significance: 4e-51; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 15 - 312
Target Start/End: Original strand, 100104 - 100411
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||||||||| || ||| ||||||||| || ||||||||||| ||  ||| ||||||       |||||    
T  100104 tgtattggatcatgattctaagggattttaaaagacttttttatcatgaaaaagtcttctgatattcaatcaacacactttccaatttaaaaaaagtctt 100203  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatca 214  Q
     || |||||||| |||| |||||||||||| |||||||||||| |||| |||||||||||| || |||| ||       |||| |||||| |||| ||||    
T  100204 gtgttattcaatcaagattctttgtcatttaaaaaaagtcttgtggtactcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatca 100303  T
Q  215 ttcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatga 304  Q
    |||||||||| ||||||||||| ||||||          ||||||||||||| |||| ||||| ||||||||||||||||||||||||||||||| ||||    
T  100304 ttcaaatttcaaaggattgtttaataaatcaaattttgatggattttgtgggtttttctagtgaaattttaacaagaaaaagtctttcatgaaaacatga 100403  T
Q  305 gatttctt 312  Q
    ||||||||    
T  100404 gatttctt 100411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 312
Target Start/End: Complemental strand, 15320 - 15040
Alignment:
Q  42 ttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtca 141  Q
    |||||||||||||| || ||| |||| ||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||    
T  15320 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 15221  T
Q  142 ttttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataa 241  Q
    ||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| ||||    
T  15220 tttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa 15121  T
Q  242 at----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||    
T  15120 atcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 15040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 42 - 312
Target Start/End: Complemental strand, 15963 - 15683
Alignment:
Q  42 ttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtca 141  Q
    |||||||||||||| || ||| |||| ||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||    
T  15963 ttaaaagacttttttatcatgaaaaaatcttgtggtattcaatcaagactctttccaatttaaaaaaagtcttgtgttattcaatcaagattctttgtca 15864  T
Q  142 ttttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataa 241  Q
    ||| ||||||||||||  |||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| ||||    
T  15863 tttaaaaaaagtcttgtagtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataa 15764  T
Q  242 at----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||          |||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| |||| |||||||    
T  15763 atcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgaaatttctt 15683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 99; Significance: 1e-48; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 110 - 353
Target Start/End: Complemental strand, 58295 - 58042
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagactttt-catcatttnnnnnnngtcttgtggtactca 208  Q
    ||||| ||||||||||| |||||| |||| ||  |||||||||||||| |||||||| ||||||||||| ||||| ||       ||  ||||||| |||    
T  58295 gtcttgtggtattcaatcaagactttttg-caacttaaaaaagtcttgtggtattcagtcaagactttttcatcacttaaaaaaagttctgtggtattca 58197  T
Q  209 agatcattcaaatttcgaaggattgtttgataaattggattttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaa 298  Q
    | ||||||||||||||||| |||||||| |||||||||||||||          |||||||||||||| |||||||||||||| ||| ||||||||||||    
T  58196 aaatcattcaaatttcgaatgattgtttaataaattggattttgatggattttgtgggattttgtagtataattttaacaagagaaaatctttcatgaaa 58097  T
Q  299 agatgagatttcttgagattggttttattttaaaagttactatctttttattctc 353  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| ||| |||||    
T  58096 agatgagatttcttgagattgtttttcttttaaaagttactatctctttcttctc 58042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 11 - 99
Target Start/End: Complemental strand, 58352 - 58264
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa 99  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  58352 gggatgtattggattaggattccatgggattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 58264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 98; Significance: 4e-48; HSPs: 2)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 14878 - 14991
Alignment:
Q  230 attgtttgataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttatttt 329  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  14878 attgtttaataaattggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttaagattgtttttctttt 14977  T
Q  330 aaaagttactatct 343  Q
    ||||||||||||||    
T  14978 aaaagttactatct 14991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 14784 - 14872
Alignment:
Q  11 gggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaa 99  Q
    ||||||||||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14784 gggatgtattggatttggattctatgagattttaaaagactttttaattatgaaaaagtcttgtggtattcaatcaagactttttgcaa 14872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 147 - 353
Target Start/End: Complemental strand, 37089 - 36876
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaattgg 246  Q
    ||||||||||| | ||||||||||||||| ||  ||||||       |||||| |||| |||| |||||| ||||||||||| ||||||| |||||||||    
T  37089 aaaaagtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaaaatcattaaaatttcgaagcattgtttaataaattgg 36990  T
Q  247 attttg----------tgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagtt 336  Q
    ||||||          |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||   || |||||||||||    
T  36989 attttgatggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagataagatttcttgagattg---ttcttttaaaagtt 36893  T
Q  337 actatctttttattctc 353  Q
    | ||||| ||| |||||    
T  36892 attatctctttcttctc 36876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 37133 - 37056
Alignment:
Q  19 ttggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttg 96  Q
    ||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  37133 ttggattaggattatatgggattttaaaagactttttaattatgaaaaagtcttgtgctattcaatcaagactctttg 37056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 110 - 167
Target Start/End: Complemental strand, 37084 - 37027
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaa 167  Q
    ||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37084 gtcttgtgctattcaatcaagactctttgtcattttaaaaaagtcttgaggtattcaa 37027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 72; Significance: 1e-32; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 244 - 343
Target Start/End: Complemental strand, 3767 - 3668
Alignment:
Q  244 tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttcttgagattggttttattttaaaagttactatct 343  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| | |||| ||||||||| |||| ||||||||||||||||||    
T  3767 tggattttgtgggattttgtagtgtaattttaacaagaaaaggtctttcataaaaagattatattttttgagattgtttttcttttaaaagttactatct 3668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 119 - 312
Target Start/End: Original strand, 102090 - 102295
Alignment:
Q  119 tattcaattaagactctttgtcattttaaaaaag--tcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcatt 216  Q
    |||||||| |||| |||||||||||| |||||||  ||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| ||||||    
T  102090 tattcaatcaagattctttgtcatttaaaaaaagagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcatt 102189  T
Q  217 caaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgaga 306  Q
    ||||||||||| |||||||| ||||||          |||||||||||||||||| ||||| ||||||| || ||||||||||||||| |||| ||||||    
T  102190 caaatttcgaaagattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcataaaaatatgaga 102289  T
Q  307 tttctt 312  Q
    ||||||    
T  102290 tttctt 102295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 66; Significance: 5e-29; HSPs: 7)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 233685 - 233795
Alignment:
Q  70 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatc 169  Q
    |||||||||||||||||||||||||||||| ||       ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  233685 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 233784  T
Q  170 aagacttttca 180  Q
    || ||||||||    
T  233785 aaaacttttca 233795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 234533 - 234643
Alignment:
Q  70 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatc 169  Q
    |||||||||||||||||||||||||||||| ||       ||||| ||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  234533 cttgtggtattcaatcaagactttttgcaacttagaaaaagtcttgtggtattcaatcaagactctttgtcattttaaaaaagtcttaaggtcttcaatc 234632  T
Q  170 aagacttttca 180  Q
    || ||||||||    
T  234633 aaaacttttca 234643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 70 - 180
Target Start/End: Original strand, 222517 - 222627
Alignment:
Q  70 cttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatc 169  Q
    |||||||||||||||||| ||||||||||| |        ||||| ||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  222517 cttgtggtattcaatcaaaactttttgcaactaagaaaaagtcttgtggtattcaatcaaaactctttgtcattttaaaaaagtcttaaggtcttcaatc 222616  T
Q  170 aagacttttca 180  Q
    || ||||||||    
T  222617 aaaacttttca 222627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 233642 - 233675
Alignment:
Q  11 gggatgtattggattaggattctatggaatttta 44  Q
    ||||||||||||||||||||||||||| ||||||    
T  233642 gggatgtattggattaggattctatgggatttta 233675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 44
Target Start/End: Original strand, 234490 - 234523
Alignment:
Q  11 gggatgtattggattaggattctatggaatttta 44  Q
    ||||||||||||||||||||||||||| ||||||    
T  234490 gggatgtattggattaggattctatgggatttta 234523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 233721 - 233753
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||||||||||| ||||    
T  233721 aaaagtcttgtggtattcaatcaagactctttg 233753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 234569 - 234601
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttg 96  Q
    |||||||||||||||||||||||||||| ||||    
T  234569 aaaagtcttgtggtattcaatcaagactctttg 234601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 147 - 312
Target Start/End: Complemental strand, 38786 - 38612
Alignment:
Q  147 aaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataa----a 242  Q
    ||||||||||| ||||||||||||||||| || |||| ||       |||| |||||| |||| |||||||||||||||||||||||||| ||||    |    
T  38786 aaaaagtcttgtggtattcaatcaagactcttaatcacttaaaaaaagtctagtggtattcaaaatcattcaaatttcgaaggattgtttaataatcaga 38687  T
Q  243 tt-----ggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    ||     ||||||||||||||||| ||||| ||||||| || |||||||||||||||||||| ||||||||||||    
T  38686 ttttgatggattttgtgggattttctagtgaaattttagcatgaaaaagtctttcatgaaaacatgagatttctt 38612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 38834 - 38758
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagact 91  Q
    |||||||||| | ||||||| || |||||||||||  |||| || ||| ||||||||||||||||||||||||||||    
T  38834 tgtattggatcatgattctaagggattttaaaagatatttttatcatgaaaaagtcttgtggtattcaatcaagact 38758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 110 - 308
Target Start/End: Complemental strand, 39114 - 38906
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaa 209  Q
    ||||| ||||||||||| |||| ||||| |||||| |||||||||||| |||||||||| |||||| || |||| ||       |||| ||| || ||||    
T  39114 gtcttgtggtattcaatcaagattctttatcatttaaaaaaagtcttgtggtattcaataaagactcttaatcacttaaaagaagtctagtgatattcaa 39015  T
Q  210 gatcattcaaatttcgaaggattgtttgataaat----------tggattttgtgggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaa 299  Q
     ||||||||||||| |||||||||||| ||||||          |||||||||||||||||| ||||| ||||||  || ||||||||||||||||||||    
T  39014 aatcattcaaatttggaaggattgtttaataaatcagattttgatggattttgtgggattttctagtgaaattttggcatgaaaaagtctttcatgaaaa 38915  T
Q  300 gatgagatt 308  Q
     ||||||||    
T  38914 catgagatt 38906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 15 - 89
Target Start/End: Complemental strand, 39167 - 39093
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaaga 89  Q
    |||||||||| | |||||||  | ||||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  39167 tgtattggatcatgattctaatggattttaaaagacttttttatcatgaaaaagtcttgtggtattcaatcaaga 39093  T

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Target: scaffold0276 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 64 - 312
Target Start/End: Complemental strand, 804 - 546
Alignment:
Q  64 aaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtat 163  Q
    |||||||||||||||||||||||||||| ||| ||||||       ||||| || |||||||| |||| |||||||||||| |||||||| ||| |||||    
T  804 aaaagtcttgtggtattcaatcaagactctttacaatttaaaaaaagtcttgtgttattcaatcaagattctttgtcatttaaaaaaagtattgtggtat 705  T
Q  164 tcaatcaagacttttcatcatttnnnnnnngtcttgtggtactcaagatcattcaaatttcgaaggattgtttgataaat----------tggattttgt 253  Q
    |||||||| ||| || |||| ||        | | |||||| |||| ||||||||||||| |||||||||||| ||||||          ||||||||||    
T  704 tcaatcaaaactcttaatcacttaaattttttttagtggtattcaaaatcattcaaatttggaaggattgtttaataaatcatattttgatggattttgt 605  T
Q  254 gggattttgtagtgtaattttaacaagaaaaagtctttcatgaaaagatgagatttctt 312  Q
    || ||||| ||||| ||||||   | |||||||||||| | ||||| ||||||||||||    
T  604 ggaattttctagtgaaattttggtatgaaaaagtctttgacgaaaacatgagatttctt 546  T

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Target: scaffold0492 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 12094 - 12030
Alignment:
Q  8 agagggatgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtctt 72  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||    
T  12094 agagggatgtattggattaggattctatgggattttaaaagactttttaattatgaaaaagtctt 12030  T

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Target: scaffold0492; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 11998 - 12056
Alignment:
Q  14 atgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtctt 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| || ||  |||||||||    
T  11998 atgtattggattaggattctatgggattttaaaagactttttcataattaaaaagtctt 12056  T

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Target: scaffold0651 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 15 - 153
Target Start/End: Original strand, 8655 - 8793
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttttgcaatttnnnnnnngtctt 114  Q
    |||||||||| | ||||||| || ||||||||||| ||||| || ||| |||||| ||||||||||||||||||||||||| ||||||       |||||    
T  8655 tgtattggatcatgattctaagggattttaaaagatttttttatcatgaaaaagtattgtggtattcaatcaagacttttttcaatttaaaaaaagtctt 8754  T
Q  115 atggtattcaattaagactctttgtcattttaaaaaagt 153  Q
     || |||| ||| |||| |||||||||||| ||||||||    
T  8755 gtgttatttaatcaagattctttgtcatttaaaaaaagt 8793  T

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Target: scaffold0287 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0287
Description:

Target: scaffold0287; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 11869 - 11790
Alignment:
Q  15 tgtattggattaggatt-ctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    ||||||||||| ||||| ||| ||| |||||||||||||||| |||||  |||||||||||| ||||||||||||||||||    
T  11869 tgtattggattcggatttctaggga-ttttaaaagacttttttattataaaaaagtcttgtgatattcaatcaagactttt 11790  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 94
Target Start/End: Complemental strand, 81863 - 81784
Alignment:
Q  15 tgtattggattaggattctatggaattttaaaagactttttaattatggaaaagtcttgtggtattcaatcaagactttt 94  Q
    |||||||||||  |||| ||  | |||||||||||||||||  || |  |||||||||||||||||||||||||| ||||    
T  81863 tgtattggattgagattttaaaggattttaaaagacttttttgttttataaaagtcttgtggtattcaatcaagattttt 81784  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 175
Target Start/End: Original strand, 199770 - 199835
Alignment:
Q  110 gtcttatggtattcaattaagactctttgtcattttaaaaaagtcttgaggtattcaatcaagact 175  Q
    ||||| |||||| ||||||||||||||||| | || |||||||||||  |||||| ||||| ||||    
T  199770 gtcttgtggtatccaattaagactctttgtaacttaaaaaaagtcttttggtatttaatcatgact 199835  T

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