View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5747-Insertion-7 (Length: 184)

Name: NF5747-Insertion-7
Description: NF5747
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5747-Insertion-7
NF5747-Insertion-7
[»] chr8 (21 HSPs)
chr8 (77-165)||(24053913-24054001)
chr8 (76-165)||(36776402-36776491)
chr8 (80-165)||(40616094-40616179)
chr8 (87-162)||(40587695-40587770)
chr8 (84-165)||(9472158-9472238)
chr8 (94-165)||(25346050-25346121)
chr8 (99-165)||(41972977-41973043)
chr8 (100-162)||(8760723-8760785)
chr8 (100-162)||(25836268-25836330)
chr8 (80-152)||(45434992-45435064)
chr8 (94-165)||(42245732-42245803)
chr8 (100-162)||(1942811-1942873)
chr8 (101-165)||(44389005-44389069)
chr8 (100-159)||(8162781-8162840)
chr8 (78-165)||(18378802-18378889)
chr8 (94-165)||(41534248-41534319)
chr8 (100-162)||(32844171-32844233)
chr8 (77-124)||(41152667-41152714)
chr8 (77-149)||(19243234-19243306)
chr8 (77-149)||(19316418-19316490)
chr8 (101-148)||(25620731-25620778)
[»] chr4 (32 HSPs)
chr4 (77-164)||(51347487-51347574)
chr4 (77-165)||(50119957-50120045)
chr4 (83-165)||(24547336-24547418)
chr4 (80-165)||(13171627-13171712)
chr4 (77-165)||(3757725-3757813)
chr4 (74-165)||(36743201-36743292)
chr4 (77-165)||(20588561-20588649)
chr4 (77-162)||(24948289-24948374)
chr4 (77-165)||(17730432-17730520)
chr4 (94-162)||(29712386-29712454)
chr4 (94-165)||(30529278-30529349)
chr4 (77-162)||(43021891-43021976)
chr4 (77-162)||(39406234-39406319)
chr4 (77-162)||(53991554-53991639)
chr4 (77-165)||(3821198-3821286)
chr4 (77-165)||(39716717-39716805)
chr4 (100-162)||(8956938-8957000)
chr4 (100-162)||(8986910-8986972)
chr4 (100-162)||(37349808-37349870)
chr4 (84-165)||(16895991-16896072)
chr4 (77-158)||(35716305-35716386)
chr4 (100-148)||(5752473-5752521)
chr4 (100-159)||(9888895-9888954)
chr4 (78-165)||(35498532-35498619)
chr4 (94-162)||(578607-578675)
chr4 (77-165)||(12682755-12682843)
chr4 (94-165)||(52799041-52799112)
chr4 (78-132)||(47560251-47560305)
chr4 (100-162)||(50033703-50033764)
chr4 (100-149)||(35833429-35833478)
chr4 (94-165)||(15704127-15704198)
chr4 (100-148)||(46104201-46104249)
[»] chr6 (12 HSPs)
chr6 (76-165)||(9737752-9737841)
chr6 (80-162)||(4897497-4897579)
chr6 (77-165)||(33328277-33328365)
chr6 (77-148)||(6969312-6969383)
chr6 (77-148)||(15045563-15045634)
chr6 (77-165)||(1218517-1218605)
chr6 (77-165)||(24443926-24444014)
chr6 (78-165)||(25529241-25529328)
chr6 (77-165)||(18323834-18323922)
chr6 (77-165)||(35133173-35133260)
chr6 (98-148)||(9981276-9981326)
chr6 (77-148)||(4107953-4108024)
[»] chr5 (16 HSPs)
chr5 (76-165)||(36886968-36887057)
chr5 (77-165)||(17643385-17643473)
chr5 (92-165)||(30754423-30754496)
chr5 (78-165)||(3088031-3088118)
chr5 (75-162)||(12592471-12592558)
chr5 (78-165)||(25698717-25698804)
chr5 (100-162)||(6305452-6305514)
chr5 (100-162)||(43138549-43138611)
chr5 (76-165)||(41689273-41689362)
chr5 (100-159)||(754450-754509)
chr5 (101-164)||(12422345-12422408)
chr5 (114-164)||(42977833-42977883)
chr5 (77-165)||(30140501-30140589)
chr5 (78-165)||(33709813-33709900)
chr5 (78-137)||(26602196-26602255)
chr5 (114-165)||(34715632-34715683)
[»] chr1 (24 HSPs)
chr1 (80-165)||(46626324-46626409)
chr1 (77-165)||(19322344-19322432)
chr1 (77-162)||(38894754-38894839)
chr1 (78-162)||(33075659-33075743)
chr1 (77-162)||(22198910-22198995)
chr1 (75-162)||(1826790-1826877)
chr1 (77-162)||(29844884-29844969)
chr1 (80-165)||(19400733-19400818)
chr1 (77-165)||(16300388-16300476)
chr1 (74-165)||(1367287-1367378)
chr1 (78-162)||(42678374-42678458)
chr1 (80-165)||(51971272-51971356)
chr1 (77-165)||(4890097-4890185)
chr1 (94-162)||(10766202-10766270)
chr1 (77-165)||(17364603-17364691)
chr1 (77-165)||(29188300-29188388)
chr1 (77-165)||(33359699-33359787)
chr1 (77-165)||(47134703-47134791)
chr1 (101-165)||(50557850-50557913)
chr1 (77-165)||(52306068-52306156)
chr1 (100-159)||(28570747-28570806)
chr1 (77-148)||(10698135-10698206)
chr1 (80-149)||(43116050-43116119)
chr1 (100-148)||(5426238-5426286)
[»] chr7 (24 HSPs)
chr7 (78-162)||(44804520-44804604)
chr7 (7-78)||(6347200-6347271)
chr7 (7-78)||(6330722-6330793)
chr7 (78-162)||(29467751-29467835)
chr7 (78-165)||(7857009-7857095)
chr7 (83-165)||(34872174-34872256)
chr7 (94-165)||(35156995-35157066)
chr7 (83-165)||(29684113-29684195)
chr7 (77-162)||(3791478-3791563)
chr7 (77-165)||(21600970-21601058)
chr7 (94-165)||(11840447-11840518)
chr7 (76-148)||(39276611-39276683)
chr7 (78-165)||(39651148-39651235)
chr7 (75-148)||(9143470-9143546)
chr7 (100-162)||(24684636-24684698)
chr7 (77-148)||(688062-688133)
chr7 (80-165)||(17169026-17169111)
chr7 (77-165)||(48529933-48530021)
chr7 (78-148)||(21670809-21670879)
chr7 (76-148)||(49146139-49146212)
chr7 (76-165)||(27737741-27737830)
chr7 (77-148)||(4848347-4848418)
chr7 (100-147)||(31900003-31900050)
chr7 (109-149)||(42684816-42684856)
[»] chr3 (19 HSPs)
chr3 (77-165)||(29530561-29530649)
chr3 (77-165)||(8528103-8528191)
chr3 (83-162)||(35855209-35855288)
chr3 (80-165)||(26102150-26102235)
chr3 (94-165)||(19368941-19369012)
chr3 (80-165)||(28981817-28981902)
chr3 (80-162)||(11955528-11955610)
chr3 (80-165)||(40831926-40832011)
chr3 (77-158)||(22473643-22473724)
chr3 (77-165)||(11602164-11602252)
chr3 (100-148)||(18682511-18682559)
chr3 (77-148)||(8393562-8393633)
chr3 (100-165)||(22519211-22519276)
chr3 (94-165)||(55297343-55297414)
chr3 (99-165)||(19895645-19895711)
chr3 (78-148)||(33872205-33872275)
chr3 (76-148)||(26777867-26777939)
chr3 (77-148)||(4139364-4139435)
chr3 (77-123)||(48523103-48523149)
[»] chr2 (14 HSPs)
chr2 (77-165)||(10876571-10876657)
chr2 (89-165)||(19486200-19486276)
chr2 (80-162)||(17836969-17837051)
chr2 (87-165)||(42781020-42781098)
chr2 (77-162)||(32677186-32677271)
chr2 (80-162)||(9920912-9920994)
chr2 (78-165)||(4292782-4292869)
chr2 (74-165)||(10050189-10050280)
chr2 (79-165)||(9545775-9545861)
chr2 (99-165)||(19486111-19486177)
chr2 (80-165)||(2952759-2952844)
chr2 (77-148)||(28607220-28607291)
chr2 (94-162)||(18096507-18096575)
chr2 (77-165)||(24520865-24520953)
[»] scaffold0009 (2 HSPs)
scaffold0009 (80-164)||(108549-108633)
scaffold0009 (77-148)||(225434-225505)
[»] scaffold0385 (1 HSPs)
scaffold0385 (94-162)||(8303-8371)
[»] scaffold0057 (1 HSPs)
scaffold0057 (77-165)||(20579-20667)
[»] scaffold0759 (1 HSPs)
scaffold0759 (77-148)||(5908-5979)
[»] scaffold0381 (1 HSPs)
scaffold0381 (100-159)||(9591-9650)
[»] scaffold0069 (1 HSPs)
scaffold0069 (77-148)||(11772-11843)
[»] scaffold0051 (1 HSPs)
scaffold0051 (77-148)||(62061-62132)


Alignment Details
Target: chr8 (Bit Score: 85; Significance: 9e-41; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 9e-41
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 24053913 - 24054001
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  24053913 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttgag 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 36776402 - 36776491
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  36776402 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 36776491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 40616179 - 40616094
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||   |||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  40616179 tatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttgag 40616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 87 - 162
Target Start/End: Complemental strand, 40587770 - 40587695
Alignment:
Q  87 taataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  40587770 taataagaaaataaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 40587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 9472158 - 9472238
Alignment:
Q  84 tactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||| |||||||||||||||||| ||||||||||||    
T  9472158 tactaataagaaaagaaatgtcccttgaaattaccattttgcctctataa-gggcaatttggtaatctacttattggttgag 9472238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 25346050 - 25346121
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||    
T  25346050 aaaagaaatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttgag 25346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 41972977 - 41973043
Alignment:
Q  99 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttgag 41973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 8760723 - 8760785
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 25836330 - 25836268
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 25836268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 80 - 152
Target Start/End: Original strand, 45434992 - 45435064
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatcta 152  Q
    ||||||||||||||||||   ||||| ||||||||||||||||||| | ||||||||||||||||||||||||    
T  45434992 tatatactaataagaaaatccatgtcacttgaatttaccattttgcccttataaggggcaatttggtaatcta 45435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 42245803 - 42245732
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||| |||||||| |||||||||| ||||||||||| |||||| ||||||| ||||||||||||    
T  42245803 aaaagaaatgtcacttgaattcaccattttgcccctataaggggtaatttgataatctacttattggttgag 42245732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 1942811 - 1942873
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  1942811 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 1942873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 44389069 - 44389005
Alignment:
Q  101 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||| | | ||||||||| |||||||||||||||| ||||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaatctattaattggttgag 44389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 8162840 - 8162781
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 159  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 8162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 18378889 - 18378802
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||||||||||| ||||||||| ||||||||  |||| ||||||||||||||||  || ||||||||||||    
T  18378889 tctatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttgag 18378802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 41534319 - 41534248
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||| ||||||||| |||||||||||||||||||||||||||| ||||||| |||  |||| ||||||||||    
T  41534319 aaaataaatgtcccatgaatttaccattttgctcctataagggacaatttgataaattattaattggttgag 41534248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 32844171 - 32844233
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| | ||||||||||||||| || ||||||||||||||||||||||| |||||||||    
T  32844171 aatgtcccataaatttaccattttgccccgataaggggcaatttggtaatctacttattggtt 32844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Original strand, 41152667 - 41152714
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttg 124  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||    
T  41152667 atctatatacttatataaaaagaaatgtcccttgaatttaccattttg 41152714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 19243234 - 19243306
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 149  Q
    |||||||||||||||  |||||  |||||  |||| |||||| |||||| ||| | |||||||||||||||||    
T  19243234 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaat 19243306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 19316418 - 19316490
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 149  Q
    |||||||||||||||  |||||  |||||  |||| |||||| |||||| ||| | |||||||||||||||||    
T  19316418 atctatatactaatataaaaagtgatgtctgttgattttacctttttgcccctcttaggggcaatttggtaat 19316490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 101 - 148
Target Start/End: Complemental strand, 25620778 - 25620731
Alignment:
Q  101 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||| |||| ||||| ||||||| ||||| ||||||||||||||||    
T  25620778 atgtccattgattttactattttgcccctatgaggggcaatttggtaa 25620731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 4e-40; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 77 - 164
Target Start/End: Original strand, 51347487 - 51347574
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  51347487 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggttga 51347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 50120045 - 50119957
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  50120045 atctatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 50119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 9e-35
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 24547336 - 24547418
Alignment:
Q  83 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  24547336 atactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggttgag 24547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 3e-34
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 13171627 - 13171712
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  13171627 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 13171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 3757725 - 3757813
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  3757725 atctatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 3757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 36743292 - 36743201
Alignment:
Q  74 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||| ||||||||||||    
T  36743292 aacatctatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaatctacttattggttgag 36743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 20588561 - 20588649
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||| | ||||||||||||    
T  20588561 atctatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaatccacttattggttgag 20588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 24948374 - 24948289
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  24948374 atctatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttggaaatctacttattggtt 24948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 17730432 - 17730520
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||| ||||| | ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17730432 atctatatgctaatcaaaaaagaaatgtgctttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttgag 17730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 29712386 - 29712454
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29712386 aaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 29712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 30529349 - 30529278
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  30529349 aaaagaaatatcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 43021891 - 43021976
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||||||||||||||||||| ||||||||||||||| ||||  |||| ||| |||||||||||||||| |||||||||    
T  43021891 atctatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaatctacttattggtt 43021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 39406319 - 39406234
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  ||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||||||||    
T  39406319 atctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaatctacttattggtt 39406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 53991639 - 53991554
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  53991639 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 53991554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 3821286 - 3821198
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  || | ||||||||||    
T  3821286 atctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 3821198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 39716805 - 39716717
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||||    
T  39716805 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 39716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 8956938 - 8957000
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8957000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 8986910 - 8986972
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 37349808 - 37349870
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 37349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 84 - 165
Target Start/End: Original strand, 16895991 - 16896072
Alignment:
Q  84 tactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||   ||||||||||||||||| ||||||| | |||||||||| ||||||||||||||| ||||||||||    
T  16895991 tactaataagaaaatccatgtcccttgaatttacaattttgcccttataaggggctatttggtaatctattaattggttgag 16896072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Complemental strand, 35716386 - 35716305
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttatt 158  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||    
T  35716386 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 35716305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 5752473 - 5752521
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5752473 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 5752521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 9888954 - 9888895
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 159  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 35498619 - 35498532
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||  |||||||||| |||||||||||| |||||||| ||||||| || |||||||||||  || | ||||||||||    
T  35498619 tctatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttgag 35498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 578675 - 578607
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||| | |  |||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  578675 aaaagaaatgtctcattgatttaccattttgcccctataagggacaatttggtaatctacttattggtt 578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 12682843 - 12682755
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||||||||||||||  |||  ||||||||||    
T  12682843 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaaattataaattggttgag 12682755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 52799041 - 52799112
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||| || ||||||||||||| | ||||| ||||||||||||||||  || ||||||| ||||    
T  52799041 aaaagaaatgtcctttaaatttaccattttacccctattaggggcaatttggtaaattaattattggctgag 52799112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 132
Target Start/End: Complemental strand, 47560305 - 47560251
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctata 132  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||    
T  47560305 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctata 47560251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 100 - 162
Target Start/End: Original strand, 50033703 - 50033764
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||  ||||||||||||||||| | |||||||| ||||||||||||||| |||||||||    
T  50033703 aatgtcctatgaatttaccattttgcccttataaggg-caatttggtaatctacttattggtt 50033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 100 - 149
Target Start/End: Complemental strand, 35833478 - 35833429
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 149  Q
    ||||||| |||| ||||||||||||| ||||| |||||||||||||||||    
T  35833478 aatgtccattgattttaccattttgcccctatgaggggcaatttggtaat 35833429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 165
Target Start/End: Original strand, 15704127 - 15704198
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||| ||||| | || ||||||||||||||| ||||||||||| ||||||||||  || | ||||||||||    
T  15704127 aaaagtaatgttctttaaatttaccattttgcccctataaggggaaatttggtaaattactaattggttgag 15704198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 46104201 - 46104249
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||| |||| ||||||||||||| || || ||||||||||||||||    
T  46104201 aatgtccattgattttaccattttgccccaatgaggggcaatttggtaa 46104249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 1e-36; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 9737841 - 9737752
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||    
T  9737841 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttgataatctatttattggttgag 9737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 4897579 - 4897497
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4897579 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 4897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 33328365 - 33328277
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| ||||||||||   |||||| || |||||||||||||||||||| |||||||||||||||| |||| | ||||||||||    
T  33328365 atctatatacaaataagaaaatccatgtcctttaaatttaccattttgctcctacaaggggcaatttggtagtctactaattggttgag 33328277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 6969383 - 6969312
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6969383 atctatatactaatataaaagttaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 6969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 15045634 - 15045563
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  15045634 atctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 15045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 1218517 - 1218605
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  1218517 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 1218605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 24443926 - 24444014
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  24443926 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 24444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 78 - 165
Target Start/End: Original strand, 25529241 - 25529328
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||  ||||   |||||| |||  ||||| |||||||||||||||||||||||||||||||||| | ||||||||||    
T  25529241 tctatatactaatataaaaatccatgtccgttgcttttacgattttgctcctataaggggcaatttggtaatctactaattggttgag 25529328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 18323834 - 18323922
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| |   ||||||||||||  || ||||||| ||||    
T  18323834 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaaaagcaatttggtaaattaattattggctgag 18323922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 35133173 - 35133260
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| ||||||||||   |||||| || |||||||||||||||  |||||| |||||||||| ||||||| | ||||||||||    
T  35133173 atctatatacaaataagaaaatccatgtcctttaaatttaccattttgcctctataa-gggcaatttgataatctactaattggttgag 35133260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 98 - 148
Target Start/End: Complemental strand, 9981326 - 9981276
Alignment:
Q  98 gaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||| | |||||||||||||||| | ||||||||||||||||||||||    
T  9981326 gaaatgttcattgaatttaccattttacccctataaggggcaatttggtaa 9981276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 4107953 - 4108024
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||| | ||||| ||||||||||||||||    
T  4107953 atctatatactaatataaaagttaatgtccattgattttaccatttttcccctatgaggggcaatttggtaa 4108024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 1e-36; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 36887057 - 36886968
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||    
T  36887057 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattgattgag 36886968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 17643473 - 17643385
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||    
T  17643473 atctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaatctatttattggttgag 17643385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 92 - 165
Target Start/End: Original strand, 30754423 - 30754496
Alignment:
Q  92 agaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  30754423 agaaaagaaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 3088118 - 3088031
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  3088118 tctatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 3088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 162
Target Start/End: Complemental strand, 12592558 - 12592471
Alignment:
Q  75 acatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||||| |||  |||||||||||||| ||||||||||| ||| | |||||||||||||||||||||||||| |||||||||    
T  12592558 acatctatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaatctacttattggtt 12592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 25698804 - 25698717
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||||||||    
T  25698804 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 25698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 6305514 - 6305452
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 6305452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 43138611 - 43138549
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 43138549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 41689273 - 41689362
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  41689273 catctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaattaattattggctgag 41689362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 754509 - 754450
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 159  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 101 - 164
Target Start/End: Complemental strand, 12422408 - 12422345
Alignment:
Q  101 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 164  Q
    |||||| |||| ||||||||||||| |||||||||||||||||||||||||| | |||||||||    
T  12422408 atgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttga 12422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 164
Target Start/End: Complemental strand, 42977883 - 42977833
Alignment:
Q  114 ttaccattttgctcctataaggggcaatttggtaatctatttattggttga 164  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  42977883 ttaccattttgcccctataaggggcaatttggtaatctacttattggttga 42977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 30140501 - 30140589
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||| ||||||||||  || | ||||||||||    
T  30140501 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttgag 30140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 33709900 - 33709813
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||  |||||||||||||||||||||||| | ||||||| ||||||||||||||  || | ||||||||||    
T  33709900 tctatatacttatattaaaattaatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattggttgag 33709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 137
Target Start/End: Complemental strand, 26602255 - 26602196
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataagggg 137  Q
    |||||||||| |||  |||||||||||||||||||||||||||||| | | |||||||||    
T  26602255 tctatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 165
Target Start/End: Original strand, 34715632 - 34715683
Alignment:
Q  114 ttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  34715632 ttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 34715683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 1e-36; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 46626409 - 46626324
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  46626409 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 46626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 19322432 - 19322344
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||    
T  19322432 atctatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtattctacttattggttgag 19322344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 38894754 - 38894839
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||||||||||||  |||||||| |||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  38894754 atctatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 38894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 78 - 162
Target Start/End: Complemental strand, 33075743 - 33075659
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  33075743 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 33075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 22198995 - 22198910
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||    
T  22198995 atctatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaatctacttattggtt 22198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 75 - 162
Target Start/End: Original strand, 1826790 - 1826877
Alignment:
Q  75 acatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||||| |||  ||||| |||||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  1826790 acatctatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaatctatttattggtt 1826877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 29844969 - 29844884
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29844969 atctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 19400733 - 19400818
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| | ||||||||| |||| ||||||||||| ||||||||||    
T  19400733 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccatataaggggtaattcggtaatctattaattggttgag 19400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 16300388 - 16300476
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||  |||||||||||||||||||||||||||||||||||||||||||||||||  || | ||||||||||    
T  16300388 atctatatacttatattaaaattaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttgag 16300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 165
Target Start/End: Original strand, 1367287 - 1367378
Alignment:
Q  74 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  1367287 aacatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 1367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 42678374 - 42678458
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||| |||  |||||||||||||| |||||||||||||||   |||||||||||||||||| ||||||| |||||||||    
T  42678374 tctatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttgataatctacttattggtt 42678458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 51971356 - 51971272
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||   |||||||||||| |||||||||||  ||||||| ||| |||||||||||||||| ||||||||||    
T  51971356 tatatactaataagaaaattcatgtcccttgaagttaccattttgtccctataa-gggtaatttggtaatctattaattggttgag 51971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 4890097 - 4890185
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| ||||||||||||||||||  |||| ||||||||||||||||  || ||||||| ||||    
T  4890097 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaattaattattggctgag 4890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 10766202 - 10766270
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||||  || |||||||||||||| |||||||||| ||||||||||||||| |||||||||    
T  10766202 aaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaatctacttattggtt 10766270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 17364691 - 17364603
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||| ||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  17364691 atctatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 17364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 29188388 - 29188300
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  29188388 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 29188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 33359699 - 33359787
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  33359699 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 33359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 47134703 - 47134791
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||| | ||||||| |||||||||||||||||| ||||||||||||||||||||||  || | ||||||||||    
T  47134703 atctatatacttatataaaaggtaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 101 - 165
Target Start/End: Original strand, 50557850 - 50557913
Alignment:
Q  101 atgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||    
T  50557850 atgtcccatgaatttaccattttg-tcctataaggggcaatttggtaatctactaattggttgag 50557913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 52306068 - 52306156
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||| |||||| ||||||||||||||| |||||||||||||||||| |||  || | ||||||||||    
T  52306068 atctatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaatttgataaattactaattggttgag 52306156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 28570747 - 28570806
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 159  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 28570806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 10698206 - 10698135
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||| |||| |  |||||||||||||  | ||||||||||||||| |||| |||||||| ||||||||    
T  10698206 atctatatgctaacataaaaagaaatgtccaataaatttaccattttgcccctagaaggggcattttggtaa 10698135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000006
Query Start/End: Original strand, 80 - 149
Target Start/End: Original strand, 43116050 - 43116119
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaat 149  Q
    ||||||||||||  |||| | |||||| |||||||| | ||||||| ||||  |||||||||||||||||    
T  43116050 tatatactaatataaaaatacatgtccattgaatttccaattttgcccctaggaggggcaatttggtaat 43116119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 5426238 - 5426286
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||| |||| ||||||||||||| | || |||||||||||||||||    
T  5426238 aatgtccattgattttaccattttgcccttagaaggggcaatttggtaa 5426286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 5e-36; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 44804520 - 44804604
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  44804520 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggtt 44804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 6347200 - 6347271
Alignment:
Q  7 aggtttaggacttttatatttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 78  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6347200 aggtttaggacttttatatttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 6347271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 7 - 78
Target Start/End: Original strand, 6330722 - 6330793
Alignment:
Q  7 aggtttaggacttttatatttaaatgcttagaaacttcgaacattgaagctatgagatgagacttggaacat 78  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  6330722 aggtttaggacttttatatttaaatgcttagaaacttcgaacactgaagctatgagatgagacttggaacat 6330793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 8e-29
Query Start/End: Original strand, 78 - 162
Target Start/End: Original strand, 29467751 - 29467835
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  29467751 tctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 7857095 - 7857009
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| | |||||| ||| |||||| ||||||||||||||||||||    
T  7857095 tctatatactaataagaaaagaaatgtcccttgaatttaccgttttgtttctataa-gggtaatttgataatctatttattggttgag 7857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 83 - 165
Target Start/End: Original strand, 34872174 - 34872256
Alignment:
Q  83 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||| ||||||||||||||||| ||||| |||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  34872174 atactagtaagaaaagaaatgtcctttgaacttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 34872256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 35157066 - 35156995
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataaggggcaatttggtaatctacttatcggttgag 35156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 83 - 165
Target Start/End: Complemental strand, 29684195 - 29684113
Alignment:
Q  83 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||  ||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| | ||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttgag 29684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 162
Target Start/End: Original strand, 3791478 - 3791563
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  |||||||||||||  || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  3791478 atctatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 3791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 21601058 - 21600970
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||  ||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  21601058 atctatatacttctattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 21600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 11840518 - 11840447
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||    
T  11840518 aaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 11840447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 76 - 148
Target Start/End: Original strand, 39276611 - 39276683
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||    
T  39276611 catctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 39276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 39651235 - 39651148
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || | ||||||||||    
T  39651235 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttgag 39651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 9143470 - 9143546
Alignment:
Q  75 acatctatatactaataagaaaagaaatg---tcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||||  |||||||||    |||||||||||||||||||||| ||||||||||||||||||||||    
T  9143470 acatctatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaa 9143546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 100 - 162
Target Start/End: Complemental strand, 24684698 - 24684636
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||| |||||||||    
T  24684698 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 24684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 688062 - 688133
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  688062 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 17169026 - 17169111
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||| ||||| | ||||||||||||||  || ||||||| ||||    
T  17169026 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 17169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 48530021 - 48529933
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| ||||| |||||||||||| |||||  |||||||||||||||  || ||||||| ||||    
T  48530021 atctatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaattaattattggctgag 48529933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 148
Target Start/End: Complemental strand, 21670879 - 21670809
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||| |||  |||||||||||||||||||||||| ||||||| ||||||| ||  ||||||||||    
T  21670879 tctatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataaaggataatttggtaa 21670809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 49146212 - 49146139
Alignment:
Q  76 catctatatactaataagaaaaga-aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||||||||  |||||  ||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  49146212 catctatatactaatataaaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 49146139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 27737830 - 27737741
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||  ||  |||||||| ||||||||||||||||||||| | ||||||| ||  ||||||||||  || | ||||||||||    
T  27737830 catctatatacttctataaaaagaaaagtcccttgaatttaccattttacccctataaaggataatttggtaaattactaattggttgag 27737741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 4848347 - 4848418
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||| ||||||||||    
T  4848347 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggtaatttggtaa 4848418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 100 - 147
Target Start/End: Complemental strand, 31900050 - 31900003
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggta 147  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||||    
T  31900050 aatgtcctttgaatttacaattttgcccctattaggggcaatttggta 31900003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 109 - 149
Target Start/End: Original strand, 42684816 - 42684856
Alignment:
Q  109 tgaatttaccattttgctcctataaggggcaatttggtaat 149  Q
    ||||||||||||||||| ||||||||||||| ||| |||||    
T  42684816 tgaatttaccattttgcccctataaggggcattttagtaat 42684856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 77; Significance: 5e-36; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 29530649 - 29530561
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||    
T  29530649 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 29530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 8528191 - 8528103
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||||||||||| |||||||||||||||    
T  8528191 atctatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaatatatttattggttgag 8528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 5e-33
Query Start/End: Original strand, 83 - 162
Target Start/End: Original strand, 35855209 - 35855288
Alignment:
Q  83 atactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  35855209 atactaataagaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 35855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 26102235 - 26102150
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| |||||||| || |||||||||||||  ||||||||||||    
T  26102235 tatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaatctgcttattggttgag 26102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 19369012 - 19368941
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19369012 aaaagaaatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19368941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 28981902 - 28981817
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||   ||||||||||||||||||||||||| |||||||||||||||||||||||| | | ||||||||||    
T  28981902 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttgag 28981817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 11955610 - 11955528
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  11955610 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 11955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 80 - 165
Target Start/End: Complemental strand, 40832011 - 40831926
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||| ||||||||||||   |||||||||||||||||||||||||||||||||||| ||||| ||||||||| | ||||||||||    
T  40832011 tatatcctaataagaaaatccatgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattggttgag 40831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 7e-20
Query Start/End: Original strand, 77 - 158
Target Start/End: Original strand, 22473643 - 22473724
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttatt 158  Q
    ||||||||||| |||  ||||||||||| || || |||||||||||||| |||||||||||||||||||||||||| |||||    
T  22473643 atctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 22473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 11602252 - 11602164
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||  ||||   |||||| |||| ||||||||||||| ||||||||||||||||  |||||||||| ||||||||||    
T  11602252 atctatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaattcagtaatctattaattggttgag 11602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 7e-17
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 18682511 - 18682559
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  18682511 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 18682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 8393562 - 8393633
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  8393562 atctatatactaatataaaagttaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 8393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 100 - 165
Target Start/End: Original strand, 22519211 - 22519276
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||| |||||||||||||||||| ||||||||||||||||| ||||  |||| ||||||||||    
T  22519211 aatgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattggttgag 22519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 165
Target Start/End: Complemental strand, 55297414 - 55297343
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||| |||||||||||||| | ||||||| ||| ||||||||||  |||| ||||||||||    
T  55297414 aaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaattattaattggttgag 55297343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 19895711 - 19895645
Alignment:
Q  99 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||| |||||||||||||||||| | ||||| ||||||||||||||  || | ||||||||||    
T  19895711 aaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattggttgag 19895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 33872205 - 33872275
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||||||  |||||||||||||  ||||||||||||||||  |||| ||||| || ||||||||    
T  33872205 tctatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaagggccattttggtaa 33872275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 148
Target Start/End: Complemental strand, 26777939 - 26777867
Alignment:
Q  76 catctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||||||||  |||   || |||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  26777939 catctatatactaatataaaagttaacgtccattgattttaccattttgcccctatgaggggcaatttggtaa 26777867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 4139435 - 4139364
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||  ||||| ||||||||||||||||    
T  4139435 atctatatactaatataaaagttaatgtccattgattttaccattttgtccctattaggggcaatttggtaa 4139364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 123
Target Start/End: Complemental strand, 48523149 - 48523103
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccatttt 123  Q
    |||||||||||||||  ||||||||||| ||| ||||||||||||||    
T  48523149 atctatatactaatataaaaagaaatgttcctagaatttaccatttt 48523103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 8e-32; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 8e-32
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 10876657 - 10876571
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||| ||||||||||||    
T  10876657 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgcccc--taaggggcaatttggtaatctacttattggttgag 10876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 89 - 165
Target Start/End: Original strand, 19486200 - 19486276
Alignment:
Q  89 ataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19486200 ataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 17836969 - 17837051
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  17836969 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 17837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 87 - 165
Target Start/End: Original strand, 42781020 - 42781098
Alignment:
Q  87 taataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||    
T  42781020 taataagaaaagaaatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaatctatttattggttgag 42781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 77 - 162
Target Start/End: Complemental strand, 32677271 - 32677186
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||| |||  |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  32677271 atctatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 32677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 80 - 162
Target Start/End: Complemental strand, 9920994 - 9920912
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||| |||  |||||||||||||| || |||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9920994 tatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 9920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 4292869 - 4292782
Alignment:
Q  78 tctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||| |||  ||||||||||||| |||||||||||||||||||||||| | ||||||||||||||  || ||||||| ||||    
T  4292869 tctatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaattaattattggctgag 4292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 165
Target Start/End: Complemental strand, 10050280 - 10050189
Alignment:
Q  74 aacatctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||  || | ||||||||||    
T  10050280 aacatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttgataaattactaattggttgag 10050189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 79 - 165
Target Start/End: Complemental strand, 9545861 - 9545775
Alignment:
Q  79 ctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  9545861 ctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 9545775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 99 - 165
Target Start/End: Complemental strand, 19486177 - 19486111
Alignment:
Q  99 aaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||| ||| ||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||    
T  19486177 aaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttgag 19486111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 165
Target Start/End: Original strand, 2952759 - 2952844
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  2952759 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 2952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 28607220 - 28607291
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||| |||  |||| |||||||| |||||||||||||||||  ||||||||||||||||||||||    
T  28607220 atctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaa 28607291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 18096507 - 18096575
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    ||||||||||||| |||||||||||||||||| ||||||||||| ||||||| ||  |||| |||||||    
T  18096507 aaaagaaatgtcctttgaatttaccattttgcccctataaggggtaatttggcaaattattaattggtt 18096575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 165
Target Start/End: Original strand, 24520865 - 24520953
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  |||||||||||||||||||||||  |||||||  |||||||| ||||||||||||  || | ||||||||||    
T  24520865 atctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttgag 24520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 80 - 164
Target Start/End: Original strand, 108549 - 108633
Alignment:
Q  80 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttga 164  Q
    |||||||||||||||||||||||||||||||||||||||||||||  || |||||||| ||||||||||||||  ||||||||||    
T  108549 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaatctacgtattggttga 108633  T

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Target: scaffold0009; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 225434 - 225505
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  225434 atctatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 225505  T

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Target: scaffold0385 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 8371 - 8303
Alignment:
Q  94 aaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggtt 162  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8371 aaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8303  T

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Target: scaffold0057 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 77 - 165
Target Start/End: Complemental strand, 20667 - 20579
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattggttgag 165  Q
    ||||||||||| |||  ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||  || ||||||| ||||    
T  20667 atctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 20579  T

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Target: scaffold0759 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 5979 - 5908
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   |||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  5979 atctatatactaatataaaagttaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 5908  T

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Target: scaffold0381 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 100 - 159
Target Start/End: Original strand, 9591 - 9650
Alignment:
Q  100 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctatttattg 159  Q
    |||||||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9650  T

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Target: scaffold0069 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 11772 - 11843
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    ||||||||||| |||  ||||||||||||  ||||||||||||||||||   ||| ||||||||||||||||    
T  11772 atctatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaa 11843  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 62061 - 62132
Alignment:
Q  77 atctatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaa 148  Q
    |||||||||||||||  |||   ||||||| |||| ||||||||||||| ||||| ||||||||||||||||    
T  62061 atctatatactaatataaaagttaatgtccattgattttaccattttgcccctatgaggggcaatttggtaa 62132  T

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