View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5748_low_1 (Length: 540)

Name: NF5748_low_1
Description: NF5748
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5748_low_1
NF5748_low_1
[»] chr8 (38 HSPs)
chr8 (18-523)||(9623126-9623636)
chr8 (389-522)||(6199017-6199150)
chr8 (389-523)||(24473688-24473822)
chr8 (389-523)||(37396708-37396842)
chr8 (386-521)||(37397067-37397202)
chr8 (389-521)||(17431287-17431419)
chr8 (386-518)||(24473340-24473472)
chr8 (387-523)||(34498120-34498255)
chr8 (389-520)||(20861561-20861692)
chr8 (389-524)||(41662521-41662656)
chr8 (411-521)||(33727027-33727137)
chr8 (389-523)||(34498475-34498609)
chr8 (389-521)||(6198658-6198790)
chr8 (392-521)||(15444569-15444698)
chr8 (386-523)||(16169527-16169664)
chr8 (392-518)||(25439052-25439176)
chr8 (391-523)||(15444213-15444345)
chr8 (386-521)||(16169171-16169305)
chr8 (389-512)||(2856526-2856650)
chr8 (458-523)||(33726734-33726799)
chr8 (380-495)||(39723996-39724111)
chr8 (417-495)||(39723430-39723508)
chr8 (417-495)||(9823309-9823387)
chr8 (417-495)||(13027229-13027307)
chr8 (391-506)||(15442765-15442880)
chr8 (386-453)||(25438789-25438856)
chr8 (417-495)||(3307366-3307444)
chr8 (417-495)||(13026663-13026741)
chr8 (421-487)||(13936754-13936820)
chr8 (381-495)||(22851382-22851496)
chr8 (422-495)||(9822781-9822854)
chr8 (417-495)||(6092803-6092881)
chr8 (392-505)||(15042148-15042261)
chr8 (391-451)||(33726696-33726756)
chr8 (388-459)||(9623864-9623936)
chr8 (389-467)||(13937365-13937443)
chr8 (387-496)||(41662349-41662459)
chr8 (417-505)||(15043721-15043809)
[»] chr4 (43 HSPs)
chr4 (381-524)||(32703569-32703712)
chr4 (387-523)||(4239286-4239422)
chr4 (389-524)||(28196692-28196827)
chr4 (389-521)||(9380663-9380795)
chr4 (390-521)||(25161879-25162010)
chr4 (389-524)||(28196346-28196481)
chr4 (389-523)||(292782-292916)
chr4 (389-523)||(39744385-39744519)
chr4 (386-524)||(169358-169496)
chr4 (389-524)||(169013-169149)
chr4 (389-521)||(293139-293271)
chr4 (389-517)||(9380307-9380435)
chr4 (388-524)||(23540171-23540307)
chr4 (389-524)||(32703225-32703360)
chr4 (389-523)||(9023244-9023378)
chr4 (390-520)||(43292038-43292168)
chr4 (388-524)||(39086542-39086678)
chr4 (389-521)||(39744030-39744162)
chr4 (389-518)||(9023605-9023734)
chr4 (387-523)||(43292279-43292413)
chr4 (412-523)||(25162233-25162344)
chr4 (389-524)||(48405962-48406096)
chr4 (412-524)||(23539862-23539974)
chr4 (412-524)||(26207383-26207495)
chr4 (412-520)||(48406308-48406416)
chr4 (412-523)||(12757789-12757900)
chr4 (389-524)||(26207665-26207800)
chr4 (392-520)||(12758127-12758254)
chr4 (412-518)||(44468849-44468954)
chr4 (386-523)||(39912407-39912543)
chr4 (389-518)||(39912054-39912181)
chr4 (417-487)||(36095845-36095915)
chr4 (417-495)||(50678807-50678885)
chr4 (387-495)||(50679372-50679480)
chr4 (417-495)||(36096423-36096501)
chr4 (392-495)||(43050610-43050713)
chr4 (417-495)||(43051200-43051278)
chr4 (389-491)||(56505693-56505795)
chr4 (387-443)||(11241387-11241443)
chr4 (387-497)||(16555762-16555873)
chr4 (417-487)||(45830152-45830222)
chr4 (389-495)||(56506522-56506628)
chr4 (390-467)||(11529169-11529246)
[»] scaffold0460 (2 HSPs)
scaffold0460 (389-523)||(330-464)
scaffold0460 (386-523)||(685-819)
[»] chr7 (36 HSPs)
chr7 (386-524)||(37888830-37888968)
chr7 (389-524)||(10533034-10533169)
chr7 (389-524)||(37889178-37889313)
chr7 (389-523)||(20419244-20419378)
chr7 (389-523)||(37972316-37972450)
chr7 (389-521)||(22740156-22740288)
chr7 (389-524)||(17156967-17157102)
chr7 (392-523)||(18863970-18864101)
chr7 (389-524)||(29292922-29293057)
chr7 (392-521)||(20418891-20419020)
chr7 (389-524)||(3205012-3205147)
chr7 (389-524)||(13744152-13744286)
chr7 (412-523)||(18864322-18864433)
chr7 (387-517)||(36527724-36527854)
chr7 (387-524)||(3204667-3204802)
chr7 (389-523)||(42418591-42418725)
chr7 (388-524)||(9035211-9035348)
chr7 (389-524)||(9034867-9035003)
chr7 (387-523)||(13741555-13741690)
chr7 (389-521)||(37971960-37972092)
chr7 (388-524)||(48359319-48359453)
chr7 (386-524)||(29293265-29293403)
chr7 (412-521)||(42418950-42419060)
chr7 (389-524)||(38826832-38826967)
chr7 (412-523)||(22740512-22740622)
chr7 (393-501)||(48359600-48359707)
chr7 (392-524)||(36527387-36527518)
chr7 (389-453)||(16198967-16199031)
chr7 (386-495)||(44599486-44599595)
chr7 (417-495)||(44600083-44600161)
chr7 (389-495)||(8643714-8643820)
chr7 (417-495)||(13863341-13863419)
chr7 (417-495)||(13863905-13863982)
chr7 (389-466)||(46816288-46816365)
chr7 (387-439)||(3687660-3687712)
chr7 (390-445)||(18925320-18925373)
[»] chr2 (32 HSPs)
chr2 (385-524)||(26692739-26692878)
chr2 (386-519)||(7664597-7664730)
chr2 (392-523)||(8851151-8851282)
chr2 (389-523)||(8851503-8851636)
chr2 (412-524)||(19141768-19141880)
chr2 (389-523)||(17851323-17851456)
chr2 (392-520)||(5793450-5793578)
chr2 (388-523)||(16910826-16910961)
chr2 (412-521)||(6324940-6325049)
chr2 (412-521)||(16911191-16911300)
chr2 (381-521)||(17850970-17851109)
chr2 (389-519)||(7664248-7664378)
chr2 (411-523)||(7979587-7979699)
chr2 (392-524)||(26692399-26692531)
chr2 (389-518)||(7979928-7980056)
chr2 (391-523)||(6325267-6325399)
chr2 (389-524)||(41790831-41790966)
chr2 (412-524)||(41790513-41790625)
chr2 (389-487)||(37720204-37720301)
chr2 (389-512)||(5379890-5380013)
chr2 (387-524)||(18749724-18749859)
chr2 (389-505)||(5378661-5378777)
chr2 (391-493)||(19141446-19141547)
chr2 (412-524)||(18750059-18750157)
chr2 (388-495)||(38490789-38490895)
chr2 (417-495)||(2638848-2638926)
chr2 (417-495)||(18296104-18296182)
chr2 (417-495)||(2639430-2639508)
chr2 (417-495)||(7591229-7591307)
chr2 (417-495)||(26841615-26841693)
chr2 (417-495)||(26842186-26842264)
chr2 (417-495)||(7591798-7591876)
[»] chr1 (59 HSPs)
chr1 (386-521)||(48105038-48105173)
chr1 (386-519)||(26814691-26814824)
chr1 (381-524)||(49318085-49318227)
chr1 (386-524)||(9347123-9347261)
chr1 (389-523)||(32162963-32163097)
chr1 (391-524)||(50526391-50526524)
chr1 (389-521)||(6703460-6703592)
chr1 (378-518)||(13918435-13918575)
chr1 (389-521)||(28633720-28633852)
chr1 (388-524)||(49317751-49317886)
chr1 (387-523)||(50430001-50430137)
chr1 (389-524)||(999444-999578)
chr1 (392-523)||(48104681-48104812)
chr1 (389-523)||(20480168-20480301)
chr1 (386-524)||(50615540-50615677)
chr1 (386-524)||(50623368-50623505)
chr1 (389-522)||(46824199-46824332)
chr1 (389-524)||(4692352-4692487)
chr1 (392-523)||(28634077-28634208)
chr1 (386-523)||(21687022-21687159)
chr1 (381-518)||(27172108-27172244)
chr1 (392-524)||(42611188-42611320)
chr1 (390-521)||(13918789-13918920)
chr1 (392-523)||(46823846-46823977)
chr1 (387-523)||(6703814-6703950)
chr1 (412-524)||(9347470-9347582)
chr1 (389-521)||(27172464-27172595)
chr1 (386-523)||(20371272-20371409)
chr1 (389-519)||(26815043-26815173)
chr1 (381-523)||(47498293-47498433)
chr1 (386-524)||(49318364-49318499)
chr1 (412-518)||(999134-999239)
chr1 (383-523)||(20480534-20480671)
chr1 (387-524)||(42611533-42611670)
chr1 (412-523)||(20371061-20371171)
chr1 (389-524)||(44911025-44911160)
chr1 (389-524)||(50429656-50429790)
chr1 (414-523)||(44224039-44224148)
chr1 (412-524)||(21687386-21687498)
chr1 (392-524)||(44911356-44911488)
chr1 (412-524)||(50949484-50949596)
chr1 (389-524)||(4692022-4692155)
chr1 (394-523)||(32162734-32162857)
chr1 (389-501)||(19008692-19008804)
chr1 (389-506)||(39691937-39692054)
chr1 (450-521)||(44223745-44223815)
chr1 (417-495)||(49284437-49284515)
chr1 (381-495)||(6002229-6002343)
chr1 (417-495)||(49285003-49285081)
chr1 (422-495)||(6002842-6002915)
chr1 (434-497)||(6712215-6712279)
chr1 (458-505)||(19007774-19007821)
chr1 (412-465)||(50949184-50949237)
chr1 (388-443)||(41082908-41082963)
chr1 (481-524)||(50615289-50615332)
chr1 (481-524)||(50623117-50623160)
chr1 (389-438)||(50615240-50615289)
chr1 (389-438)||(50623068-50623117)
chr1 (389-445)||(8108991-8109047)
[»] chr3 (35 HSPs)
chr3 (380-521)||(10348721-10348862)
chr3 (389-518)||(48159897-48160026)
chr3 (386-521)||(27238822-27238957)
chr3 (389-523)||(40848881-40849015)
chr3 (391-523)||(22429516-22429647)
chr3 (389-521)||(40848521-40848652)
chr3 (388-524)||(47666254-47666390)
chr3 (386-518)||(48160258-48160390)
chr3 (382-524)||(3353121-3353260)
chr3 (412-523)||(24485044-24485155)
chr3 (412-523)||(27238488-27238599)
chr3 (412-523)||(36180577-36180688)
chr3 (388-523)||(42672977-42673111)
chr3 (389-516)||(53687888-53688015)
chr3 (381-523)||(24485381-24485521)
chr3 (412-524)||(3353471-3353582)
chr3 (386-518)||(42673221-42673352)
chr3 (378-521)||(26007541-26007686)
chr3 (390-523)||(22429159-22429292)
chr3 (384-521)||(36180912-36181049)
chr3 (386-523)||(44007964-44008101)
chr3 (386-523)||(53766160-53766296)
chr3 (412-523)||(26007204-26007315)
chr3 (386-523)||(53688223-53688359)
chr3 (390-523)||(10348480-10348613)
chr3 (421-518)||(42456121-42456217)
chr3 (386-521)||(44008323-44008457)
chr3 (378-524)||(47665900-47666046)
chr3 (387-506)||(8314011-8314130)
chr3 (388-524)||(21896432-21896565)
chr3 (417-491)||(1928386-1928460)
chr3 (389-523)||(53766511-53766633)
chr3 (472-523)||(42455852-42455903)
chr3 (389-452)||(42455790-42455853)
chr3 (386-439)||(20969023-20969076)
[»] scaffold0017 (2 HSPs)
scaffold0017 (387-520)||(185197-185330)
scaffold0017 (390-521)||(184840-184971)
[»] chr5 (38 HSPs)
chr5 (389-524)||(12498847-12498982)
chr5 (389-523)||(26571084-26571218)
chr5 (412-523)||(19514549-19514660)
chr5 (392-521)||(21207229-21207358)
chr5 (392-524)||(2817152-2817283)
chr5 (389-524)||(12498567-12498701)
chr5 (389-518)||(34147435-34147564)
chr5 (392-524)||(3888581-3888713)
chr5 (389-524)||(34147141-34147274)
chr5 (389-521)||(43464114-43464245)
chr5 (387-524)||(3888237-3888373)
chr5 (390-523)||(22729360-22729492)
chr5 (384-521)||(26570724-26570861)
chr5 (389-521)||(19514885-19515017)
chr5 (412-524)||(41072133-41072245)
chr5 (392-523)||(10098861-10098991)
chr5 (392-521)||(11316896-11317025)
chr5 (386-518)||(30401879-30402010)
chr5 (387-521)||(22729006-22729138)
chr5 (386-523)||(37780664-37780799)
chr5 (392-497)||(43463759-43463863)
chr5 (389-505)||(25940521-25940637)
chr5 (412-518)||(37610544-37610649)
chr5 (381-500)||(25940956-25941076)
chr5 (389-483)||(37780320-37780413)
chr5 (386-524)||(2817495-2817631)
chr5 (389-483)||(37610202-37610295)
chr5 (387-472)||(10098517-10098602)
chr5 (453-523)||(25940885-25940955)
chr5 (412-484)||(11316737-11316809)
chr5 (387-495)||(18817559-18817667)
chr5 (389-506)||(42919305-42919421)
chr5 (417-495)||(18816980-18817058)
chr5 (417-465)||(11351405-11351453)
chr5 (417-495)||(11350836-11350913)
chr5 (486-523)||(10098602-10098639)
chr5 (389-441)||(16466744-16466796)
chr5 (389-445)||(26020450-26020506)
[»] chr6 (19 HSPs)
chr6 (388-523)||(33974219-33974354)
chr6 (386-523)||(32733916-32734053)
chr6 (389-524)||(7654467-7654602)
chr6 (388-523)||(10087779-10087913)
chr6 (390-523)||(22755010-22755142)
chr6 (381-521)||(22684280-22684419)
chr6 (381-521)||(22754649-22754788)
chr6 (386-524)||(2354406-2354543)
chr6 (386-523)||(13176617-13176753)
chr6 (412-524)||(29074291-29074403)
chr6 (412-524)||(29079055-29079167)
chr6 (412-524)||(29106864-29106976)
chr6 (412-523)||(32733580-32733691)
chr6 (412-524)||(2354730-2354841)
chr6 (412-515)||(13176984-13177087)
chr6 (386-495)||(33828987-33829096)
chr6 (412-518)||(33973887-33973991)
chr6 (417-495)||(33829584-33829662)
chr6 (381-439)||(18242160-18242218)
[»] scaffold0041 (2 HSPs)
scaffold0041 (389-523)||(38615-38749)
scaffold0041 (422-523)||(38284-38385)
[»] scaffold0029 (3 HSPs)
scaffold0029 (389-523)||(9905-10040)
scaffold0029 (459-523)||(10268-10332)
scaffold0029 (384-451)||(10311-10376)
[»] scaffold0069 (2 HSPs)
scaffold0069 (386-523)||(50426-50563)
scaffold0069 (412-523)||(50096-50206)
[»] scaffold0176 (2 HSPs)
scaffold0176 (389-521)||(19621-19752)
scaffold0176 (389-523)||(19964-20097)
[»] scaffold0328 (2 HSPs)
scaffold0328 (417-495)||(6743-6821)
scaffold0328 (387-495)||(6150-6258)
[»] scaffold0001 (1 HSPs)
scaffold0001 (389-443)||(439199-439253)
[»] scaffold0802 (1 HSPs)
scaffold0802 (387-439)||(1424-1476)


Alignment Details
Target: chr8 (Bit Score: 375; Significance: 0; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 18 - 523
Target Start/End: Original strand, 9623126 - 9623636
Alignment:
Q  18 taaatgaatccaaaacctatgttccatgggctctcaatttcttttttcaaacgtaaaatctattnnnnnnnnn--ttaagctcaaatagttaataaattt 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||    
T  9623126 taaatgaatccaaaacctatgttccatgggctctcaatttcttttttcaaacgtaaaatctattaaaaaaaaaaattaagctcaaatagttaataaattt 9623225  T
Q  116 tattaaataatcaatcgtttgaaagattttaagttcaattttttatggaacaatattttattaagttaaacgttcctgacatctaaacttcaaattatca 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||    
T  9623226 tattaaataatcaatcgtttgaaagattttaagttcaattttttatggaacaatattttgttaagttaaacgtttctgacatctaaacttcaaattatca 9623325  T
Q  216 tgatccattttcctaaaacatggatgactaacnnnnnnnnnn--ttggtcatgnnnnnnn-aaaactgcatactcaaagtacaagattcgaagaacaaga 312  Q
    ||||||||||||||||||||||||||||||||            ||||||||         |||||||||||||||||||||||||||||||||||||||    
T  9623326 tgatccattttcctaaaacatggatgactaacaacaaaaaaaaattggtcatattttttttaaaactgcatactcaaagtacaagattcgaagaacaaga 9623425  T
Q  313 cgtacccgaattcaaaaccttcatcatataaaccaggctagcaaatcttaacatgtactgcaaacatattttatttggcttaattgcactttttctcatt 412  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  9623426 cgtacccgaattcaaaaccttcatcatataaaccaggctagcaaatcttaacatgtactgcaaacatattttatttggcttaattgcactttttctcact 9623525  T
Q  413 atagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacat 512  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9623526 atagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctttttctgattttatggtccccttgacat 9623625  T
Q  513 ttagtgctgat 523  Q
    |||||||||||    
T  9623626 ttagtgctgat 9623636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 389 - 522
Target Start/End: Complemental strand, 6199150 - 6199017
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  6199150 ggcttaattgcacttttcttccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccccttt 6199051  T
Q  489 ctgattttatggtccccttgacatttagtgctga 522  Q
    ||||||||||| ||||| ||||||||||||||||    
T  6199050 ctgattttatgatccccatgacatttagtgctga 6199017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 24473822 - 24473688
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||  ||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |||    
T  24473822 ggcttaattgcacttttcatccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttcccccttt 24473723  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  24473722 ctgattttatggtccccatgacatttagtgctgat 24473688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 37396708 - 37396842
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  37396708 ggcttaattgcacttttcccccctatagtttgccgattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37396807  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  37396808 ctgattttatggtccccatgacatttagtgctgat 37396842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 386 - 521
Target Start/End: Complemental strand, 37397202 - 37397067
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||||| |||||||     
T  37397202 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgactttgccccctatagatttccccc 37397103  T
Q  486 tttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||||||| |||||||||||||||    
T  37397102 tttctgattttatggtccccatgacatttagtgctg 37397067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 17431287 - 17431419
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| ||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||| |||    
T  17431287 ggcttaattgcacttttcccccatatagtttgtcaattgtgcgatttttcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 17431386  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  17431387 ctgattttatggtccccatgacatttagtgctg 17431419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 386 - 518
Target Start/End: Original strand, 24473340 - 24473472
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||||| |  |||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||||||||||||||| ||||     
T  24473340 tttggcttaattgcactttttccccctatagtttgccaattgtgtgattttgcaccccataattttaaatgagcgattttgccccctatagtttcccccc 24473439  T
Q  486 tttctgattttatggtccccttgacatttagtg 518  Q
    |||||||||||||||||||| ||||||||||||    
T  24473440 tttctgattttatggtccccatgacatttagtg 24473472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 387 - 523
Target Start/End: Original strand, 34498120 - 34498255
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||| |||||||||||||||| |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||| |    
T  34498120 ttggtttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgcaccctatag-tttccccct 34498218  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34498219 ttctgattttatggtccccatgacatttagtgctgat 34498255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 520
Target Start/End: Complemental strand, 20861692 - 20861561
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||| |||||| |  |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||| |||    
T  20861692 ggcttaattgcattttttccccctatagtctgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgcctcctataattttcccccttt 20861593  T
Q  489 ctgattttatggtccccttgacatttagtgct 520  Q
    ||||||||||||||||| ||||||||||||||    
T  20861592 ctgattttatggtccccatgacatttagtgct 20861561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 41662521 - 41662656
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| || |||    
T  41662521 ggcttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttctcccttt 41662620  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    || |||||||||| ||| ||||||||||||||||||    
T  41662621 ctaattttatggttcccatgacatttagtgctgatg 41662656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 411 - 521
Target Start/End: Complemental strand, 33727137 - 33727027
Alignment:
Q  411 ttatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgac 510  Q
    ||||||||||| |||||||||||||||||   |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  33727137 ttatagtttgctaattgtgcgattttgcacttcatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgac 33727038  T
Q  511 atttagtgctg 521  Q
    |||||||||||    
T  33727037 atttagtgctg 33727027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 34498609 - 34498475
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||| ||||||||||||||||| ||||||||||||||| || |||| ||||||||||| |||||||| |||    
T  34498609 ggcttaattgcacttttcccccctatagtttgcaaattgtgcgattttgcaccccatagttttaaacaagagattatgccccctatatttttcccccttt 34498510  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  34498509 ctgattttatggtccccatgacatttagtgctgat 34498475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 6198658 - 6198790
Alignment:
Q  389 ggcttaattgcactttt-tctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||| || ||| || || | ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||    
T  6198658 ggcttaattgcacttttctcccat-atggtcttccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccatt 6198756  T
Q  488 tctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||||| |||||||||||||||    
T  6198757 tctgattttatggtccccatgacatttagtgctg 6198790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 392 - 521
Target Start/End: Complemental strand, 15444698 - 15444569
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||||| |  |||| ||| ||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  15444698 ttaattgcactttttccccctataatttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 15444599  T
Q  492 attttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||| |||||||||||||||    
T  15444598 attttatggtccccatgacatttagtgctg 15444569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 16169664 - 16169527
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| |||  ||||||||  ||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||| |||     
T  16169664 tttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccc 16169565  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  16169564 tttctgattttatggttcccatgacatttagtgctgat 16169527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 392 - 518
Target Start/End: Complemental strand, 25439176 - 25439052
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||||| | | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||| ||    
T  25439176 ttaattgcactttttcccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagtttccccctttt-tg 25439079  T
Q  492 attttatggtccccttgacatttagtg 518  Q
    |||||||||||||| ||||||||||||    
T  25439078 attttatggtccccatgacatttagtg 25439052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 391 - 523
Target Start/End: Original strand, 15444213 - 15444345
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    |||||||||| |||| | |  ||||||||||||||||| | ||||| ||| |||||||||||||||||||||||||| |||||||||||||||| ||| |    
T  15444213 cttaattgcatttttcccctctatagtttgccaattgtacaattttacattccatagttttaaacgagcgattttgctccctatagttttccccctttat 15444312  T
Q  491 gattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||| || |||||||||||||||||    
T  15444313 gattttatggtctccatgacatttagtgctgat 15444345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 386 - 521
Target Start/End: Original strand, 16169171 - 16169305
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||||||||  || | |||||||||||||||||| |||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||     
T  16169171 tttggcttaattgcacttttcatcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccc 16169269  T
Q  486 tttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||||| | ||||||||| |||||    
T  16169270 tttctgattttatggtcctcgtgacatttaatgctg 16169305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 512
Target Start/End: Original strand, 2856526 - 2856650
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||| | |||| |||  |||||||||||||||||||||||||||| |||||||||| |||||  |||||||  ||||||||||||||||| |||    
T  2856526 ggcttaattgtaattttcctccctatagtttgccaattgtgcgattttgcaccccatagtttaaaacgttcgattttatcccctatagttttcccccttt 2856625  T
Q  489 ctgattttatggtc-cccttgacat 512  Q
    |||||||  ||||| ||||||||||    
T  2856626 ctgatttattggtcgcccttgacat 2856650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 458 - 523
Target Start/End: Original strand, 33726734 - 33726799
Alignment:
Q  458 gcgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||||    
T  33726734 gcgattttgcctcctatagttttccccctttctgattttatggtccccatgacatttagtgctgat 33726799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 495
Target Start/End: Complemental strand, 39724111 - 39723996
Alignment:
Q  380 attttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttt 479  Q
    ||||| ||||||||||||||||||||   |  |||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||    
T  39724111 attttttttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttt 39724012  T
Q  480 tccccttttctgattt 495  Q
    ||||| ||||||||||    
T  39724011 tccccctttctgattt 39723996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 39723430 - 39723508
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  39723430 tttgccaattgtgcgattttgcatcccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 39723508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 9823387 - 9823309
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  9823387 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 9823309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 13027307 - 13027229
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  13027307 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 13027229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 15442765 - 15442880
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    |||||||||| |||| | |  |||| || |||||||||| ||||||||| |||||  ||||||||| |||||||||| ||||||  |||||||  ||| |    
T  15442765 cttaattgcatttttcccccctatatttcgccaattgtgtgattttgcaccccatgtttttaaacgtgcgattttgcaccctatccttttcccgctttgt 15442864  T
Q  491 gattttatggtcccct 506  Q
    ||||||||||||||||    
T  15442865 gattttatggtcccct 15442880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 386 - 453
Target Start/End: Original strand, 25438789 - 25438856
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaa 453  Q
    |||| ||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||    
T  25438789 tttgacttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaa 25438856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 3307366 - 3307444
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||  ||||| || ||||||||||    
T  3307366 tttgtcaattgtgcgattttgcatcccatatttttaaacaagcgattttgcaccccatctttttctccctttctgattt 3307444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 13026663 - 13026741
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| | |||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  13026663 tttgccaattgtgcgattttgcacctcatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 13026741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 421 - 487
Target Start/End: Original strand, 13936754 - 13936820
Alignment:
Q  421 ccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||||||    
T  13936754 ccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccttt 13936820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 495
Target Start/End: Original strand, 22851382 - 22851496
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| ||||||||||||||||||||   |  |||  |||| |||||||||||||||||| |||||  |||||||| ||||||||||| ||| ||  ||||    
T  22851382 ttttttttggcttaattgcacttttcacccctatcttttgtcaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatcttttt 22851481  T
Q  481 ccccttttctgattt 495  Q
    |||| ||||||||||    
T  22851482 ccccctttctgattt 22851496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 422 - 495
Target Start/End: Original strand, 9822781 - 9822854
Alignment:
Q  422 caattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| || |||  |||||||| ||||||||||    
T  9822781 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccatatctttttccccctttctgattt 9822854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 6092803 - 6092881
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||| ||||||||||||||||||||||||| ||||||  || ||||||||| ||| ||  ||||||||||||| |||||    
T  6092803 tttgtcaattgtgcgattttgcatcccatatttttaattgaacgattttgcaccccatctttttccccttttcagattt 6092881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 392 - 505
Target Start/End: Original strand, 15042148 - 15042261
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||  | | ||||  ||||||||||||| ||||||||| || || |||||||| |||||||||||| | | ||  |||||||| ||||||    
T  15042148 ttaattgcactttccccccttatcttttgccaattgtgtgattttgcaccctattgttttaaatgagcgattttgcacgccatcattttccccctttctg 15042247  T
Q  492 attttatggtcccc 505  Q
    |||| | |||||||    
T  15042248 atttcaaggtcccc 15042261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 33726696 - 33726756
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagtttt 451  Q
    ||||||||||||||||| |  |||||||| |||||||||||||||||| ||| ||||||||    
T  33726696 cttaattgcactttttccccctatagtttaccaattgtgcgattttgcctcctatagtttt 33726756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 388 - 459
Target Start/End: Complemental strand, 9623936 - 9623864
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc--atagttttaaacgagc 459  Q
    ||||||||||||||||||  || | ||||||||||||| ||| ||||||||| |||  ||||||||||||||||    
T  9623936 tggcttaattgcacttttcatcct-atagtttgccaatcgtgtgattttgcaccccatatagttttaaacgagc 9623864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 13937443 - 13937365
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 467  Q
    ||||||||||||||||| | |  |||  |||| ||||||||||| |||||| |||||  ||||||||||| ||||||||    
T  13937443 ggcttaattgcacttttcccccctattttttgtcaattgtgcgaatttgcaccccatgtttttaaacgagtgattttgc 13937365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 387 - 496
Target Start/End: Complemental strand, 41662459 - 41662349
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cccct 485  Q
    ||||||||||||||||||| | |  |||  ||||||||||||||||||||||| ||| |  |||| |  |||||||||||| ||| ||  |||| ||||     
T  41662459 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccctcttttttattgagcgattttgcaccccatctttttgccccc 41662360  T
Q  486 tttctgatttt 496  Q
    |||||||||||    
T  41662359 tttctgatttt 41662349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 417 - 505
Target Start/End: Complemental strand, 15043809 - 15043721
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtcccc 505  Q
    |||| |||||| |||||||||    |||||||||||||||||||||||| | |||  |  ||||| ||||||||||||| | |||||||    
T  15043809 tttgacaattgcgcgattttgtgctccatagttttaaacgagcgattttacaccccgttcttttctccttttctgatttcaaggtcccc 15043721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 2e-56; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 381 - 524
Target Start/End: Complemental strand, 32703712 - 32703569
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32703712 ttttttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt 32703613  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||||||||||| |||||||||||| |||||    
T  32703612 ccccttttctgattttatggtccccatgacatttagtgatgatg 32703569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 387 - 523
Target Start/End: Complemental strand, 4239422 - 4239286
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    ||||||||||||||||||||| |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |    
T  4239422 ttggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatatttttccccct 4239323  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||||| |||||||||||| ||||    
T  4239322 ttctgattttatggtccccatgacatttagtgttgat 4239286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 28196827 - 28196692
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  28196827 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196728  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| |||||||||||| |||||    
T  28196727 ctgattttatggtccccatgacatttagtgatgatg 28196692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 389 - 521
Target Start/End: Complemental strand, 9380795 - 9380663
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||    
T  9380795 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380696  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  9380695 ctgattttatggtccccatgacatttagtgctg 9380663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 390 - 521
Target Start/End: Original strand, 25161879 - 25162010
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    |||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  25161879 gcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 25161978  T
Q  490 tgattttatggtccccttgacatttagtgctg 521  Q
    ||||| |||||||||| |||||||||||||||    
T  25161979 tgattgtatggtccccatgacatttagtgctg 25162010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 28196346 - 28196481
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  28196346 ggcttaattgcacttttcccccctataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28196445  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  28196446 ctgattttatggtccccatgacatttaatgctgatg 28196481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 292782 - 292916
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||||||| |||    
T  292782 ggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcatctcatagttttaaacgagcgattttgccccctacagttttcccccttt 292881  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  292882 ctgattttatggtccccatgacatttagtgctgat 292916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 39744519 - 39744385
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  39744519 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 39744420  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||| |||||||| |||||||||||||||||    
T  39744419 ctgattttgtggtccccatgacatttagtgctgat 39744385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 169496 - 169358
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||| |||| | |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  169496 tttggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 169397  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||| |||||||||||||||| |||||||||||| |||||    
T  169396 tttttgattttatggtccccatgacatttagtgttgatg 169358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 169013 - 169149
Alignment:
Q  389 ggcttaattgcactttt-tctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||| || |  |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||    
T  169013 ggcttaattgcacttttctccccctatagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttgccccctatagtttttcccctt 169112  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| |||||||||||| |||||    
T  169113 tctgattttatggtccccatgacatttagtgttgatg 169149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 521
Target Start/End: Complemental strand, 293271 - 293139
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||    
T  293271 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccgtatagttttcccccttt 293172  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||| |||| ||| |||||||||||    
T  293171 ctgattttatggcccccatgaaatttagtgctg 293139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 517
Target Start/End: Original strand, 9380307 - 9380435
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||| |||    
T  9380307 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgccccccatagttttaaacgagcgattttgccccctatagttttcccccttt 9380406  T
Q  489 ctgattttatggtccccttgacatttagt 517  Q
    ||||||||||||||| | |||||||||||    
T  9380407 ctgattttatggtcctcatgacatttagt 9380435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 23540307 - 23540171
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||||   |  ||||||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||||| ||    
T  23540307 tggcttaattgcacttttcacccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttaccccctatagttttccccctt 23540208  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| ||||||||||||||||||    
T  23540207 tctgattttatggtccccatgacatttagtgctgatg 23540171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 32703225 - 32703360
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||| |||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  32703225 ggcttaattgcacttttcccccctataatttgccaattgtgcgattatgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 32703324  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||| ||||||||    
T  32703325 ctgattttatggtccccgtgacatttaatgctgatg 32703360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 9023244 - 9023378
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||   |  |||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||    
T  9023244 ggcttaattgcacttttctcccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagtgattttgccccctatagttttcccccttt 9023343  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
     |||||||||||||||| ||||||||| |||||||    
T  9023344 atgattttatggtccccatgacatttaatgctgat 9023378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 390 - 520
Target Start/End: Original strand, 43292038 - 43292168
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    |||||||||||||||||  |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  43292038 gcttaattgcacttttttcccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttc 43292137  T
Q  490 tgattttatggtccccttgacatttagtgct 520  Q
    |||||||||||||| | ||||||||||||||    
T  43292138 tgattttatggtcctcatgacatttagtgct 43292168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 39086678 - 39086542
Alignment:
Q  388 tggcttaattgcactttt-tctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||| |    
T  39086678 tggcttaattgcacttttctcccat-atagtttgccaattgtgcgattttgcacctaatagttttaaacgagcgattttgccccctatagttttccccct 39086580  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||  | ||||||||||||||||||    
T  39086579 ttctgattttatggtctgcatgacatttagtgctgatg 39086542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 39744030 - 39744162
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  |||||||| |||||||||||||||| || |||||| ||||||||||||||||||||||||||||||||||||| |||    
T  39744030 ggcttaattgcactttttccccctatagtttaccaattgtgcgattttccaccccataattttaaacgagcgattttgccccctatagttttcccccttt 39744129  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||  ||||||||||    
T  39744130 ctgattttatggtccccgtgatgtttagtgctg 39744162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 389 - 518
Target Start/End: Complemental strand, 9023734 - 9023605
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  9023734 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 9023635  T
Q  489 ctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||||||||| | | ||||||||    
T  9023634 ctgattttatggtccccatcagatttagtg 9023605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 387 - 523
Target Start/End: Complemental strand, 43292413 - 43292279
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||| |||| | |  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  43292413 ttggcttaattgcatttttcccccctttagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccc-t 43292315  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||| |||||  |||||||||||| ||||    
T  43292314 ttctgattttat-gtcccaatgacatttagtgttgat 43292279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 523
Target Start/End: Complemental strand, 25162344 - 25162233
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||| |||| |||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  25162344 tatattttgtcaattgtgtgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgaca 25162245  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  25162244 tttagtgctgat 25162233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 48405962 - 48406096
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  48405962 ggcttaattgcacttttccccct-atagtttgccaattatgcaattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 48406060  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||| |||||||||||| |||||||||||| |||||    
T  48406061 ctgactttatggtccccatgacatttagtgatgatg 48406096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 524
Target Start/End: Original strand, 23539862 - 23539974
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||| |||||| | |||||||||||||||| ||| |||||    
T  23539862 tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgaacgattttgccccctatatttttcctcctttctgattttatggttcccatgaca 23539961  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  23539962 tttagtgctgatg 23539974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 524
Target Start/End: Original strand, 26207383 - 26207495
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||    
T  26207383 tatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttcccatgaca 26207482  T
Q  512 tttagtgctgatg 524  Q
    |||| ||||||||    
T  26207483 tttaatgctgatg 26207495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 520
Target Start/End: Complemental strand, 48406416 - 48406308
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||||    
T  48406416 tataatttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagtttttcccctttctgattttatggtccccatgaca 48406317  T
Q  512 tttagtgct 520  Q
    |||| ||||    
T  48406316 tttaatgct 48406308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 12757789 - 12757900
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||  |||||||||||||||||||| ||| |    
T  12757789 tatagtttgtcaattgtgcgattttgcatctcatagttttaaacgagcgattttgtcccctatagtttttcctctttctgattttatggtccccatgata 12757888  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  12757889 tttagtgctgat 12757900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 26207800 - 26207665
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||| |||| | |  |||||||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| | |||    
T  26207800 ggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctccttt 26207701  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||| |||||||| |||||    
T  26207700 ctgattttatggttcccatgatatttagtgttgatg 26207665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 520
Target Start/End: Complemental strand, 12758254 - 12758127
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    ||||||||||||||| || | |||||||||||||| || | |||||||  |||||||||||||||||| |||||||||||||||||||||||| ||||||    
T  12758254 ttaattgcactttttttcct-atagtttgccaattatgtgtttttgcacgccatagttttaaacgagcaattttgccccctatagttttccccctttctg 12758156  T
Q  492 attttatggtccccttgacatttagtgct 520  Q
    |||||||||||||  ||||||||||||||    
T  12758155 attttatggtccctatgacatttagtgct 12758127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 518
Target Start/End: Complemental strand, 44468954 - 44468849
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| | |||||||||||||| | ||| |||||    
T  44468954 tatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcctcctttctgattttatgat-cccatgaca 44468856  T
Q  512 tttagtg 518  Q
    |||||||    
T  44468855 tttagtg 44468849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 39912543 - 39912407
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||| ||||||| ||  | |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| | |     
T  39912543 tttggcttaattacacttttccttct-atagtttatcaattgtgcgattttgcatcccatagttttaaacgagtgattttgccacctatagtttttcgcc 39912445  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||| ||||||||| |||||| |||||||||||||||||    
T  39912444 tttatgattttatagtccccatgacatttagtgctgat 39912407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 39912054 - 39912181
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| |||  ||||||||   |||||||||||||| ||||| |||||||||||||| |||||||||||| ||||||||||||| |||    
T  39912054 ggcttaattgcacttttcctccctatagtttattaattgtgcgattttacatcc-atagttttaaacgaacgattttgcccc-tatagttttcccccttt 39912151  T
Q  489 ctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||||||||| | | ||||||||    
T  39912152 ctgattttatggtccccatcagatttagtg 39912181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 487
Target Start/End: Original strand, 36095845 - 36095915
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||||||  |||||||||||    
T  36095845 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccctatctttttccccttt 36095915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 50678807 - 50678885
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  50678807 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 50678885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 387 - 495
Target Start/End: Complemental strand, 50679480 - 50679372
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||||   |  |||  |||||||||||| |||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  50679480 ttggcttaattgcacttttcacccctatcttttgccaattgtacgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 50679381  T
Q  487 ttctgattt 495  Q
    |||||||||    
T  50679380 ttctgattt 50679372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 36096501 - 36096423
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||| ||| ||||||||||    
T  36096501 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttttcccctttctgattt 36096423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 392 - 495
Target Start/End: Original strand, 43050610 - 43050713
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    ||||||||||||||  ||  |||  ||| ||||||||||||||||||| |||||  ||||||||||| |||||||| ||| ||  |||||||| ||||||    
T  43050610 ttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgtttttaaacgagtgattttgcaccccatctttttccccctttctg 43050709  T
Q  492 attt 495  Q
    ||||    
T  43050710 attt 43050713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 43051278 - 43051200
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||| ||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||  ||||||||||    
T  43051278 tttgccaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctttctgattt 43051200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 389 - 491
Target Start/End: Original strand, 56505693 - 56505795
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||  ||||||||||||||||||||||| |||||| ||||||  |||| ||||||| ||| ||  |||||||| |||    
T  56505693 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccatatttttaattgagctattttgcaccccatctttttcccccttt 56505792  T
Q  489 ctg 491  Q
    |||    
T  56505793 ctg 56505795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 11241387 - 11241443
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc 443  Q
    ||||||||||||||||||| ||| ||||  ||||  |||||||||||||||||||||    
T  11241387 ttggcttaattgcacttttcctccttatcttttgttaattgtgcgattttgcatccc 11241443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 497
Target Start/End: Complemental strand, 16555873 - 16555762
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt-cccct 485  Q
    ||||||||||||||||||| | | ||||  ||||| ||||||||||||||||| |||||  ||||    |||||||||||| ||| ||  |||| ||||     
T  16555873 ttggcttaattgcacttttcccccttatcttttgctaattgtgcgattttgcaccccatctttttttttgagcgattttgcaccccatctttttgccccc 16555774  T
Q  486 tttctgatttta 497  Q
    ||||||||||||    
T  16555773 tttctgatttta 16555762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 417 - 487
Target Start/End: Complemental strand, 45830222 - 45830152
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||| ||||||||||||||| || |||||  ||||||| |||||||||||| ||| ||  |||||||||||    
T  45830222 tttgtcaattgtgcgattttacaccccatgtttttaaaagagcgattttgcaccccatctttttccccttt 45830152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 495
Target Start/End: Complemental strand, 56506628 - 56506522
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||   | ||||  |||||||||||||| |||||| |  ||||  ||||||  |||||||||||| ||| ||  |||||||| |||    
T  56506628 ggcttaattgcacttttcacccttatcttttgccaattgtgcaattttgtactccatgtttttaattgagcgattttgcaccccatcattttcccccttt 56506529  T
Q  489 ctgattt 495  Q
    |||||||    
T  56506528 ctgattt 56506522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 467
Target Start/End: Original strand, 11529169 - 11529246
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgc 467  Q
    |||||||||||||||| |||  ||   ||||||||||||| ||||||||| |||||  |||||| || ||||||||||    
T  11529169 gcttaattgcacttttcctccctaacttttgccaattgtgtgattttgcaccccatgtttttaatcgtgcgattttgc 11529246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460 (Bit Score: 111; Significance: 9e-56; HSPs: 2)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 330 - 464
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  330 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 429  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  430 ctgattttatggtccccgtgacatttagtgctgat 464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0460; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 819 - 685
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||||| | | ||||||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||| | |     
T  819 tttggcttaattgcactttttcccct-atagtttgccaattgtgcgattttgcaccccataattttaaacgagcgattttg-cccctatagtttt-ctca 723  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  722 tttctgattttatggtccccatgacatttaatgctgat 685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 9e-56; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 386 - 524
Target Start/End: Original strand, 37888830 - 37888968
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  37888830 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 37888929  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  37888930 tttctgattttatggtccccatgacatttagtgctgatg 37888968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 10533034 - 10533169
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  10533034 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 10533133  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10533134 ctgattttatggtccccatgacatttagtgctgatg 10533169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 37889313 - 37889178
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |||    
T  37889313 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccttt 37889214  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  37889213 ctgattttatggtccccatgacatttagtgctgatg 37889178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 20419378 - 20419244
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  20419378 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20419279  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  20419278 ctgattttatggtccccgtgacatttagtgctgat 20419244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 37972450 - 37972316
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  37972450 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 37972351  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    | ||||||||||||||| |||||||||||||||||    
T  37972350 cagattttatggtccccatgacatttagtgctgat 37972316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 22740156 - 22740288
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  22740156 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 22740255  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  22740256 ctgattttatggtccccatgacatttagtgctg 22740288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 17156967 - 17157102
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||    
T  17156967 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttcccccttt 17157066  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  17157067 ctgattttatggtccccatgacatttagtgctgatg 17157102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 392 - 523
Target Start/End: Original strand, 18863970 - 18864101
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18863970 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 18864069  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| |||||||||||||||||    
T  18864070 attttatggtccccatgacatttagtgctgat 18864101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 29292922 - 29293057
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  29292922 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcatcccattgtttaaaacgagcgattttgccccctatagttttcccccttt 29293021  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||||||||||||||||||    
T  29293022 ctgattttatggttcccatgacatttagtgctgatg 29293057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 392 - 521
Target Start/End: Original strand, 20418891 - 20419020
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  20418891 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 20418990  T
Q  492 attttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||| |||||||||||||||    
T  20418991 attttatggtccccatgacatttagtgctg 20419020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 3205147 - 3205012
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  3205147 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 3205048  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| |||||||||||| |||||    
T  3205047 ctgattttatggtccccatgacatttagtgttgatg 3205012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 13744286 - 13744152
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  13744286 ggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 13744188  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
     |||||||||||||||| ||| ||||||||||||||    
T  13744187 ttgattttatggtccccatgatatttagtgctgatg 13744152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 412 - 523
Target Start/End: Complemental strand, 18864433 - 18864322
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  18864433 tatagtttgccaattgtgcgattttgcacctcatagttttaaaagagcgattttgccccctatagttttccccctttctgattttatggtccccatgaca 18864334  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  18864333 tttagtgctgat 18864322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 387 - 517
Target Start/End: Complemental strand, 36527854 - 36527724
Alignment:
Q  387 ttggcttaattgcactttttc-tcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||| |||| | |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  36527854 ttggcttaattgcatttttccctcat-atagtttgccaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccc 36527756  T
Q  486 tttctgattttatggtccccttgacatttagt 517  Q
    ||||||||||||||||| || |||||||||||    
T  36527755 tttctgattttatggtctccatgacatttagt 36527724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 387 - 524
Target Start/End: Original strand, 3204667 - 3204802
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    ||||||||||||||||||  | |  |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||  |    
T  3204667 ttggcttaattgcactttccccc--tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcaattttgccccctatagttttccctct 3204764  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  3204765 ttctgattttatggtccccatgacatttattgctgatg 3204802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 42418591 - 42418725
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||| ||||||| | |  |||||||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  42418591 ggcttaatttcacttttcccccctatagtttgctaattgtgcgattttgtatcctatagttttaaacgagcgattttgccccctatagttttcccccttt 42418690  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    || |||||||||||||| |||||||||||||||||    
T  42418691 ctaattttatggtccccatgacatttagtgctgat 42418725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 9035348 - 9035211
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttc-ccctt 486  Q
    |||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |    
T  9035348 tggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctcccct 9035249  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||   |||||||||||| |||||    
T  9035248 ttctgattttatggtccagatgacatttagtgatgatg 9035211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 9034867 - 9035003
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc-atagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||| | |  |||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  9034867 ggcttaattgcacttttcccccctataatttgccaattgtgcgattctgcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 9034966  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| ||||||||| ||||||||    
T  9034967 tctgattttatggtccccatgacatttaatgctgatg 9035003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 523
Target Start/End: Original strand, 13741555 - 13741690
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||| |||| | |  |||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  13741555 ttggcttaattgcatttttcccccctatagtttaccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccact 13741654  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||| |||||||||||| |||||||||||||||||    
T  13741655 ttctga-tttatggtccccgtgacatttagtgctgat 13741690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 37971960 - 37972092
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||   |  | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||    
T  37971960 ggcttaattgcacttttctcccctgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttccccttt 37972059  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||| ||||    
T  37972060 ctgattttatggtccccatgacatttagcgctg 37972092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 388 - 524
Target Start/End: Original strand, 48359319 - 48359453
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | | | |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||    
T  48359319 tggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatag-tttccccctt 48359416  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| ||||||||||||||||||    
T  48359417 tctgattttatggtccccatgacatttagtgctgatg 48359453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 29293403 - 29293265
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||| |||| | |  ||||||||||||||||||||||||||||  |||| |||| |||||||||||||||||||||||||||||||||     
T  29293403 tttggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcactccattgtttaaaacgagcgattttgccccctatagttttccccc 29293304  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||| ||| ||||||||| ||||||||    
T  29293303 tttctgattttatggttcccatgacatttactgctgatg 29293265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 412 - 521
Target Start/End: Complemental strand, 42419060 - 42418950
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatccc-atagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgac 510  Q
    |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||    
T  42419060 tatagtttgccaattgtgcgtttttgcacccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgac 42418961  T
Q  511 atttagtgctg 521  Q
    |||||||||||    
T  42418960 atttagtgctg 42418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 38826967 - 38826832
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||| |||| | |  ||||||||| |||||||||||||||||| | ||||||||||||||| || ||||||||||||||||||||||| |||    
T  38826967 ggcttaattgcatttttcccccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacgaacggttttgccccctatagttttcccccttt 38826868  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||| ||||| ||||||||||||||||||    
T  38826867 ctgattttatgatccccatgacatttagtgctgatg 38826832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 523
Target Start/End: Complemental strand, 22740622 - 22740512
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||| ||| ||||| |||||||||| |||||    
T  22740622 tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttcccc-tttatgattctatggtccccatgaca 22740524  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  22740523 tttagtgctgat 22740512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 393 - 501
Target Start/End: Complemental strand, 48359707 - 48359600
Alignment:
Q  393 taattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctga 492  Q
    ||||||||||||||| | | ||||||| ||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  48359707 taattgcactttttcccct-atagtttaccaattgtgcgattttgcaccacatagtttaaaacgagcgattttgccccctatagttttccccctttctga 48359609  T
Q  493 ttttatggt 501  Q
    |||||||||    
T  48359608 ttttatggt 48359600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 392 - 524
Target Start/End: Original strand, 36527387 - 36527518
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||||| | | |||||||| |||||||||||||||||| ||||||||||||||||| | ||||| |||| ||||||||| ||| ||||||    
T  36527387 ttaattgcactttttcccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcaatttttccccttatagtttttcccctttctg 36527485  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    ||||||| |||||| |||||||| ||| |||||    
T  36527486 attttatagtccccatgacatttggtgatgatg 36527518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 389 - 453
Target Start/End: Complemental strand, 16199031 - 16198967
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaa 453  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  16199031 ggcttaattgcactttttcccattatagtttgccaattgtgcgattttgcaccccatagttttaa 16198967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 495
Target Start/End: Original strand, 44599486 - 44599595
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||||||||   |  |||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||     
T  44599486 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 44599585  T
Q  486 tttctgattt 495  Q
    ||||||||||    
T  44599586 tttctgattt 44599595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 44600161 - 44600083
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  44600161 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 44600083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 389 - 495
Target Start/End: Complemental strand, 8643820 - 8643714
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||  ||  |||  ||| ||||||||||||||||||| |||||  | |||||||||||||||||| ||| ||  |||||||| |||    
T  8643820 ggcttaattgcacttttcatccctatcttttaccaattgtgcgattttgcaccccatgttattaaacgagcgattttgcaccccatctttttcccccttt 8643721  T
Q  489 ctgattt 495  Q
    |||||||    
T  8643720 ctgattt 8643714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 13863341 - 13863419
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||  ||||||||||    
T  13863341 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccctctttctgattt 13863419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 13863982 - 13863905
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||| ||| |||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  13863982 tttgccaattgtgcgattt-gcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 13863905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 389 - 466
Target Start/End: Complemental strand, 46816365 - 46816288
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttg 466  Q
    ||||||||||||||||||| |  |||  ||| |||||| |||||||||||| |||||| |||||||||||||||||||    
T  46816365 ggcttaattgcactttttcccgctatcttttaccaattatgcgattttgcaccccatatttttaaacgagcgattttg 46816288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 3687712 - 3687660
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgca 439  Q
    ||||||||||||||||||| | |  |||  |||||||||||||||||||||||    
T  3687712 ttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 3687660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 18925373 - 18925320
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccat 445  Q
    |||||||||||||||| |||  |||| ||||| ||||||||||||||||| |||||    
T  18925373 gcttaattgcacttttcctc--tatattttgctaattgtgcgattttgcaccccat 18925320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 5e-54; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 385 - 524
Target Start/End: Complemental strand, 26692878 - 26692739
Alignment:
Q  385 atttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccc 484  Q
    |||||| |||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26692878 atttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc 26692779  T
Q  485 ttttctgattttatggtccccttgacatttagtgctgatg 524  Q
     |||||||||||||||||||| ||||||||||||||||||    
T  26692778 ctttctgattttatggtccccatgacatttagtgctgatg 26692739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 386 - 519
Target Start/End: Complemental strand, 7664730 - 7664597
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  7664730 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 7664631  T
Q  486 tttctgattttatggtccccttgacatttagtgc 519  Q
    |||||||||||||||||||| |||||||||||||    
T  7664630 tttctgattttatggtccccatgacatttagtgc 7664597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 392 - 523
Target Start/End: Original strand, 8851151 - 8851282
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8851151 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 8851250  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| |||||||||||| ||||    
T  8851251 attttatggtccccatgacatttagtgttgat 8851282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 8851636 - 8851503
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  8851636 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccc-ttt 8851538  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  8851537 ctgattttatggtccccatgacatttagtgctgat 8851503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 19141880 - 19141768
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  19141880 tatagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgaca 19141781  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  19141780 tttagtgctgatg 19141768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 17851456 - 17851323
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||    |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||    
T  17851456 ggcttaattgcacttttttcttttatagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 17851357  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||| ||| |||||||||||||||||    
T  17851356 ctgattttatggt-cccatgacatttagtgctgat 17851323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 520
Target Start/End: Original strand, 5793450 - 5793578
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | | || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  ||||||    
T  5793450 ttaattgcacttttcccccttgtagtttgccaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccctatagttttccctctttctg 5793549  T
Q  492 attttatggtccccttgacatttagtgct 520  Q
    |||||||||||||| |||||||| |||||    
T  5793550 attttatggtccccatgacattttgtgct 5793578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 388 - 523
Target Start/End: Original strand, 16910826 - 16910961
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | |  | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | ||    
T  16910826 tggcttaattgcacttttcccccatgtagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttcctcctt 16910925  T
Q  488 tctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||| |||||||||||| ||||    
T  16910926 tctgattttatggtccccatgacatttagtgttgat 16910961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 412 - 521
Target Start/End: Original strand, 6324940 - 6325049
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||| |||||    
T  6324940 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttccctctttctgattttatggcccccatgaca 6325039  T
Q  512 tttagtgctg 521  Q
    ||||||||||    
T  6325040 tttagtgctg 6325049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 412 - 521
Target Start/End: Complemental strand, 16911300 - 16911191
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| || |||||    
T  16911300 tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccccctttctgattttatggtctccgtgaca 16911201  T
Q  512 tttagtgctg 521  Q
    ||||||||||    
T  16911200 tttagtgctg 16911191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 381 - 521
Target Start/End: Original strand, 17850970 - 17851109
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||| |||    
T  17850970 ttttttttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagtttt-aacgagcgattttgccccctatagattt 17851068  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctg 521  Q
    |||| ||| |||||||||||||||| ||| |||||||||||    
T  17851069 ccccctttatgattttatggtccccatgatatttagtgctg 17851109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 389 - 519
Target Start/End: Original strand, 7664248 - 7664378
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  7664248 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 7664347  T
Q  489 ctgattttatggtccccttgacatttagtgc 519  Q
    ||||||||||||||||| ||| |||||||||    
T  7664348 ctgattttatggtccccatgatatttagtgc 7664378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 411 - 523
Target Start/End: Original strand, 7979587 - 7979699
Alignment:
Q  411 ttatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgac 510  Q
    |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||  ||||    
T  7979587 ttatagtttgacaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctctttctgattttatgatccctatgac 7979686  T
Q  511 atttagtgctgat 523  Q
    |||||||||||||    
T  7979687 atttagtgctgat 7979699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 392 - 524
Target Start/End: Original strand, 26692399 - 26692531
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||||| |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||| ||| ||||||    
T  26692399 ttaattgcactttttccctctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctataatttttcccctttctg 26692498  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||  |||||||| ||||||||    
T  26692499 attttatggtccccaagacatttattgctgatg 26692531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 389 - 518
Target Start/End: Complemental strand, 7980056 - 7979928
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  |||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||| ||| |||    
T  7980056 ggcttaattgcactttttc-ctctatagtttgctaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccgcctatagtttttccccttt 7979958  T
Q  489 ctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||||||||| ||| ||||||||    
T  7979957 ctgattttatggtccccatgatatttagtg 7979928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 6325399 - 6325267
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    ||||||||||||||| | |  |||||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||| |||||    
T  6325399 cttaattgcacttttcccccatatagtttgccaattgtgcgattttgcacctcatagtattaaacgagcgattttgccccctatagttttccccatttct 6325300  T
Q  491 gattttatggtccccttgacatttagtgctgat 523  Q
    || |||||||||||   || |||||||||||||    
T  6325299 gactttatggtccctaggatatttagtgctgat 6325267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 41790966 - 41790831
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||| ||||||||||||||||||||||  ||||| |||| ||||||||||||||||||||||||||||||||  |||    
T  41790966 ggcttaattgcacttttcccccctatattttgccaattgtgcgattttgccccccattgtttaaaacgagcgattttgccccctatagttttccctcttt 41790867  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||| |||||||| |||||    
T  41790866 ctgattttatggttcccatgatatttagtgttgatg 41790831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 412 - 524
Target Start/End: Original strand, 41790513 - 41790625
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||| | |||||||||||||||| | | |||||    
T  41790513 tatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcctcctttctgattttatggttctcatgaca 41790612  T
Q  512 tttagtgctgatg 524  Q
    |||| ||||||||    
T  41790613 tttaatgctgatg 41790625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 389 - 487
Target Start/End: Original strand, 37720204 - 37720301
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  37720204 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttg-cccctatagttttccccttt 37720301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 389 - 512
Target Start/End: Complemental strand, 5380013 - 5379890
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||| ||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||| ||| |||| |||    
T  5380013 ggcttaattgcacttttcccccctatagtttaccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttacccccttt 5379914  T
Q  489 ctgattttatggtccccttgacat 512  Q
    ||||||| ||||||||| ||||||    
T  5379913 ctgatttgatggtccccctgacat 5379890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 387 - 524
Target Start/End: Original strand, 18749724 - 18749859
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||| |||||||||||||| ||| |  ||||||| ||||| || ||||||||| |||||||||||||||||  ||||||||||||||||||||| ||| |    
T  18749724 ttggtttaattgcacttttactcctc-tagtttgtcaattatgtgattttgcaccccatagttttaaacgaatgattttgccccctatagtttttccc-t 18749821  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||| |||| | ||||||||||||||||    
T  18749822 ttctgattttatgggccccataacatttagtgctgatg 18749859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 389 - 505
Target Start/End: Original strand, 5378661 - 5378777
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| ||| |||||| ||||| |||||||||||||||||| ||| |||  |||    
T  5378661 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccgtagtttaaaacgtgcgattttgccccctatattttaccctcttt 5378760  T
Q  489 ctgattttatggtcccc 505  Q
    ||||||| |||||||||    
T  5378761 ctgatttgatggtcccc 5378777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 391 - 493
Target Start/End: Original strand, 19141446 - 19141547
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    ||||||||||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||||||||||||| ||| |    
T  19141446 cttaattgcactttttccccctatagtttgccaattgtgc-attttgcaccccatagttttaaacgagcgaatttaccccctatagttttccccctttat 19141544  T
Q  491 gat 493  Q
    |||    
T  19141545 gat 19141547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 18750157 - 18750059
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||              |||||||||||||||||||| |||||    
T  18750157 tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccc--------------tttctgattttatggtccccatgaca 18750072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 388 - 495
Target Start/End: Complemental strand, 38490895 - 38490789
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||  |||  |||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||| ||| ||  |||||||| ||    
T  38490895 tggcttaattgcactttc-ctccctatagtttaccaattgtgcgattttgcatctcatggttttaaacgagcgattttgcaccccatctttttccccctt 38490797  T
Q  488 tctgattt 495  Q
    | ||||||    
T  38490796 tatgattt 38490789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 2638848 - 2638926
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||| |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  2638848 tttgccaattgtgcgattttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttctgattt 2638926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 18296104 - 18296182
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||||||||||||||    
T  18296104 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccttttctgattt 18296182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 2639508 - 2639430
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  2639508 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 2639430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 7591229 - 7591307
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  7591229 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 7591307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 26841615 - 26841693
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  26841615 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 26841693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 26842264 - 26842186
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  26842264 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 26842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 7591876 - 7591798
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||| |||||||||||||||||| |||||  |||||||||||||||||||| ||  ||  |||||||| ||||||||||    
T  7591876 tttgtcaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatttttttccccctttctgattt 7591798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 5e-54; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 386 - 521
Target Start/End: Complemental strand, 48105173 - 48105038
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  48105173 tttggcttaattgcacttttcccccttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 48105074  T
Q  486 tttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||||||| ||| |||||||||||    
T  48105073 tttctgattttatggtccccatgatatttagtgctg 48105038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 386 - 519
Target Start/End: Original strand, 26814691 - 26814824
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| |||  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  26814691 tttggcttaattgcacttttcctccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 26814790  T
Q  486 tttctgattttatggtccccttgacatttagtgc 519  Q
    |||||||||||||||||||| |||||||||||||    
T  26814791 tttctgattttatggtccccatgacatttagtgc 26814824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 381 - 524
Target Start/End: Complemental strand, 49318227 - 49318085
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    ||||||||||||||||||||||||  | | | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  49318227 ttttatttggcttaattgcactttcccccct-atagtttgccaattgtgcgattttgcatcccatagtttaaaacgagcgattttgccccctatagtttt 49318129  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||| |||||||||||||||| ||| ||||||||||||||||||    
T  49318128 ccccctttctgattttatggttcccatgacatttagtgctgatg 49318085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 386 - 524
Target Start/End: Original strand, 9347123 - 9347261
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  9347123 tttggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 9347222  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| | |||||||||| |||||||    
T  9347223 tttctgattttatggtccgcatgacatttagcgctgatg 9347261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 32163097 - 32162963
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||    
T  32163097 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccttatagttttcccccttt 32162998  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  32162997 ctgattttatggtccccatgacatttagtgctgat 32162963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 391 - 524
Target Start/End: Complemental strand, 50526524 - 50526391
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    ||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50526524 cttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttct 50526425  T
Q  491 gattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| | ||||||||| ||||||||    
T  50526424 gattttatggtccacatgacatttaatgctgatg 50526391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 6703460 - 6703592
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||||    |||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||    
T  6703460 ggcttaattgcactttttcctcctatagtttaccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccctttt 6703559  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  6703560 ctgattttatggtccccatgacatttagtgctg 6703592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 378 - 518
Target Start/End: Original strand, 13918435 - 13918575
Alignment:
Q  378 atattttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagt 477  Q
    ||||||| ||||||||||||||||||||||    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  13918435 atattttttttggcttaattgcactttttcctcctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagt 13918534  T
Q  478 tttccccttttctgattttatggtccccttgacatttagtg 518  Q
    ||||||| ||||||||||||||||| |  ||||||||||||    
T  13918535 tttccccctttctgattttatggtcactatgacatttagtg 13918575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 28633720 - 28633852
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | |||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  28633720 ggcttaattgcacttttcccccttatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 28633819  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||| ||| |||||||||||||||    
T  28633820 ctgattttatggttcccatgacatttagtgctg 28633852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 388 - 524
Target Start/End: Original strand, 49317751 - 49317886
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | | | |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| ||    
T  49317751 tggcttaattgcacttttccccct-atagtttgccaattgtgcaattttgcatcccatagttttaaacgagcgattttaccccctatagttttccccctt 49317849  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||| ||||||||||||||||||    
T  49317850 tctgattttatggtccccatgacatttagtgctgatg 49317886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 387 - 523
Target Start/End: Complemental strand, 50430137 - 50430001
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||| |||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |    
T  50430137 ttggtttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccct 50430038  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||||| |||||||||||||||||    
T  50430037 ttctgattttatggtccccatgacatttagtgctgat 50430001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 999578 - 999444
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  999578 ggcttaattgcacttttccccct-atagattgccaattgtgcgattttgcaacccatagttttaaacgagcgattttgccccctatagttttcccccttt 999480  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  999479 ctgattttatggtccccatgacatttagtgctgatg 999444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 392 - 523
Target Start/End: Original strand, 48104681 - 48104812
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48104681 ttaattgcacttttcccccctatagtttggcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 48104780  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| |||||||||||||||||    
T  48104781 attttatggtccccatgacatttagtgctgat 48104812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 20480168 - 20480301
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  20480168 ggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 20480266  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  20480267 ctgattttatggtccccatgacatttagtgctgat 20480301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 50615677 - 50615540
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | | | |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||     
T  50615677 tttggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50615579  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  50615578 tttctgattttatggtccccatgacatttagtgctgatg 50615540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 50623505 - 50623368
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | | | |||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||     
T  50623505 tttggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagttttccccc 50623407  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  50623406 tttctgattttatggtccccatgacatttagtgctgatg 50623368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 389 - 522
Target Start/End: Complemental strand, 46824332 - 46824199
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||||||    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  46824332 ggcttaattgcactttttcctcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 46824233  T
Q  489 ctgattttatggtccccttgacatttagtgctga 522  Q
     |||||||||||||||| ||||||||||||||||    
T  46824232 ttgattttatggtccccatgacatttagtgctga 46824199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 4692487 - 4692352
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  ||||||||||||||||||| |||||||| ||||||||||||||||||||||||| || ||||||||||| ||| |||    
T  4692487 ggcttaattgcactttttccccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttacctcctatagtttttccccttt 4692388  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4692387 ctgattttatggtccccatgacatttagtgctgatg 4692352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 392 - 523
Target Start/End: Complemental strand, 28634208 - 28634077
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  ||||||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  28634208 ttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctttctg 28634109  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| |||||||||||||||||    
T  28634108 attttatggtccccatgacatttagtgctgat 28634077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 386 - 523
Target Start/End: Original strand, 21687022 - 21687159
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | |  ||||||||| ||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||| |     
T  21687022 tttggcttaattgcacttttcccccctatagtttgtcaattgtgtaattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctcc 21687121  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||| |||||||||||||||||    
T  21687122 tttctgattttatggtccccatgacatttagtgctgat 21687159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 381 - 518
Target Start/End: Original strand, 27172108 - 27172244
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| | | | ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27172108 ttttttttggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttt 27172206  T
Q  481 ccccttttctgattttatggtccccttgacatttagtg 518  Q
    |||| |||||||||||||| | ||| ||||||||||||    
T  27172207 ccccctttctgattttatgcttcccatgacatttagtg 27172244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 524
Target Start/End: Original strand, 42611188 - 42611320
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| ||||||    
T  42611188 ttaattgcacttttcccccttatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgcctcctatagttttccccctttctg 42611287  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||| ||| |||||||||||| |||||    
T  42611288 attttatggttcccatgacatttagtgttgatg 42611320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 390 - 521
Target Start/End: Complemental strand, 13918920 - 13918789
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    |||||||||||||||| |||  |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||  ||     
T  13918920 gcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcacctcatagttttaaacgaacgattttgccccctatagttttccccccttt 13918821  T
Q  490 tgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||| |||||||||||||||    
T  13918820 tgattttatggtccccatgacatttagtgctg 13918789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 392 - 523
Target Start/End: Original strand, 46823846 - 46823977
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  46823846 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcactccatagttttaaacgagcgattttgccccctatagttttccccctttctg 46823945  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||| ||| |||||||||||| ||||    
T  46823946 attttatggtacccatgacatttagtgttgat 46823977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 387 - 523
Target Start/End: Complemental strand, 6703950 - 6703814
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||||   |  ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||||||||| |    
T  6703950 ttggcttaattgcacttttctcccctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgcctcatatagttttccccct 6703851  T
Q  487 ttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| | |||||||||||||||||    
T  6703850 ttctgattttatggtcctcatgacatttagtgctgat 6703814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 9347582 - 9347470
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||| |||||    
T  9347582 tatagtttgccaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggttcccatgaca 9347483  T
Q  512 tttagtgctgatg 524  Q
    ||||||| |||||    
T  9347482 tttagtgttgatg 9347470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 389 - 521
Target Start/End: Complemental strand, 27172595 - 27172464
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  | || ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||    
T  27172595 ggcttaattgcacttttcccccctgtactttgccaattgtgcgattttgcatcccattgttttaaacgagcgattttg-cccctatagttttcccccttt 27172497  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  27172496 ctgattttatggtccccatgacatttagtgctg 27172464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 20371409 - 20371272
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc-atagttttaaacgagcgattttgccccctatagttttcccc 484  Q
    |||||||||||||||||||| | | | ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||    
T  20371409 tttggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttacccc 20371311  T
Q  485 ttttctgattttatggtccccttgacatttagtgctgat 523  Q
     |||||||||||||||||||| ||||||||| |||||||    
T  20371310 ctttctgattttatggtccccatgacatttaatgctgat 20371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 389 - 519
Target Start/End: Complemental strand, 26815173 - 26815043
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||    
T  26815173 ggcttaattgcacttttcccccctatagtttatcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctataattttcccccttt 26815074  T
Q  489 ctgattttatggtccccttgacatttagtgc 519  Q
    ||||||||||||||||| ||| |||||||||    
T  26815073 ctgattttatggtccccatgatatttagtgc 26815043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 381 - 523
Target Start/End: Original strand, 47498293 - 47498433
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||  | |  ||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||    
T  47498293 ttttttttggcttaattgcactttccccc--tatagtttgccaattgtgcaattttgcatcccatagttttaaacaagcgattttgccctctatagtttt 47498390  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    | || ||| ||||||||||||| || |||||||||||||||||    
T  47498391 ctccctttttgattttatggtctccatgacatttagtgctgat 47498433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 49318499 - 49318364
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||| |||||| |  ||||||||  ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||      
T  49318499 tttggcttaattgca-tttttccccctatagtttatcaattgtgcgattttgcatcccatagttttaaacgagcgattttatcccctatagttttccc-- 49318403  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  49318402 tttctgattttatggttcccatgacatttagtgctgatg 49318364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 412 - 518
Target Start/End: Original strand, 999134 - 999239
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| || |||||    
T  999134 tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttctcc-tttctgattttatggtctccatgaca 999232  T
Q  512 tttagtg 518  Q
    |||||||    
T  999233 tttagtg 999239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 383 - 523
Target Start/End: Complemental strand, 20480671 - 20480534
Alignment:
Q  383 ttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcc 482  Q
    ||||||||||||||||||||||| | | | ||||||||||||||||||||||||||| || |||||||||||||||||||||  ||||||||||| || |    
T  20480671 ttatttggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattt--ccccctatagtgtttc 20480575  T
Q  483 ccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    || |||||||||||||||||||| ||||||||| |||||||    
T  20480574 ccctttctgattttatggtccccatgacatttaatgctgat 20480534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 387 - 524
Target Start/End: Complemental strand, 42611670 - 42611533
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||| ||||||||||||||   |  ||||||||| |||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||| ||| |    
T  42611670 ttggtttaattgcacttttctcccctatagtttgtcaattgtgcgattttgcacctcatagttttaaacaagcgattttgccccctatagtttttcccct 42611571  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  42611570 ttctgattttatggtccccataacatttagtgctgatg 42611533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 20371061 - 20371171
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||    
T  20371061 tatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagttttcccc-tttctgattttatggtccctatgaca 20371159  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  20371160 tttagtgctgat 20371171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 44911025 - 44911160
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||  | |  |||| ||||||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||    
T  44911025 ggcttaattgcactttccccccctatattttgccaattgtgcgattttgcaccccattgtttaaaacgagcgattttgccccctatagttttcccccttt 44911124  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||| |||||||| |||||    
T  44911125 ctgattttatggttcccatgatatttagtgttgatg 44911160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 50429656 - 50429790
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||| |||||| | | ||||| ||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  | |||    
T  50429656 ggcttaattgtacttttcccctttataatttgctaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcatccttt 50429755  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||||||||||||||||||    
T  50429756 ctgattttatggt-cccatgacatttagtgctgatg 50429790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 414 - 523
Target Start/End: Complemental strand, 44224148 - 44224039
Alignment:
Q  414 tagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacatt 513  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||   |||||||    
T  44224148 tagtttaccaattgtgtgattttgcatcccatagttttaaacgagcgattttgtcccctatagttttacccctttctgattttatggtccttatgacatt 44224049  T
Q  514 tagtgctgat 523  Q
    ||||||||||    
T  44224048 tagtgctgat 44224039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 21687498 - 21687386
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||| ||||||||||||||||||||| | | ||||||||||||||||||||||| ||| || ||||||||||| |||||||||||||||||||| |||||    
T  21687498 tataatttgccaattgtgcgattttgtacctcatagttttaaacgagcgatttttccctctgtagttttccccctttctgattttatggtccccatgaca 21687399  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  21687398 tttagtgctgatg 21687386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 392 - 524
Target Start/End: Complemental strand, 44911488 - 44911356
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    ||||||||| |||||| |  |||||||||||||||||||||||||||| || || |||| ||||||||||||||||||||||||||||||| | ||||||    
T  44911488 ttaattgcattttttccccctatagtttgccaattgtgcgattttgcaccctattgtttaaaacgagcgattttgccccctatagttttcctcctttctg 44911389  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||| | | ||||||||| ||||||||    
T  44911388 attttatggttctcatgacatttaatgctgatg 44911356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 50949596 - 50949484
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||||| ||| |||| ||||||||||||||||||||||||||||| ||| |||||||||||||||| | | |||||    
T  50949596 tatagtttgtcaattgtgcgattttgcatctcattgtttaaaacgagcgattttgccccctatagtttttcccctttctgattttatggttctcatgaca 50949497  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  50949496 tttagtgctgatg 50949484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 4692022 - 4692155
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||| || |  |||||||||| |||||| ||||||||||||| ||||||| |||||||| |||||||||||||||| ||||||| |||    
T  4692022 ggcttaattgcactttctc-ctctatagtttgctaattgtacgattttgcatcctatagtttaaaacgagccattttgccccctatag-tttcccccttt 4692119  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||| ||| ||||||||||||||||||    
T  4692120 ctgattttatggttcccatgacatttagtgctgatg 4692155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 394 - 523
Target Start/End: Original strand, 32162734 - 32162857
Alignment:
Q  394 aattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgat 493  Q
    |||||||||||||||   ||||||||||||||||||| |||||||| ||||||||||||||||||| ||     ||||||||||||| ||| ||||||||    
T  32162734 aattgcactttttcttcctatagtttgccaattgtgcaattttgcaccccatagttttaaacgagc-at-----cccctatagtttttcccctttctgat 32162827  T
Q  494 tttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||| ||||||||| |||||||    
T  32162828 tttatggtccccatgacatttaatgctgat 32162857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 389 - 501
Target Start/End: Complemental strand, 19008804 - 19008692
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||  |||||||||||||||||| |||||||||| ||||| || ||||||||||||||| |||||||| |||    
T  19008804 ggcttaattgcacttttcccccctatagtttcgcaattgtgcgattttgcaccccatagtttaaaacgtgcaattttgccccctataattttcccccttt 19008705  T
Q  489 ctgattttatggt 501  Q
    ||||||| |||||    
T  19008704 ctgatttgatggt 19008692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 389 - 506
Target Start/End: Complemental strand, 39692054 - 39691937
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||| |||| |||||||||||||||||| |||||  ||||||||| | |||||||| ||||||  |||||||| |||    
T  39692054 ggcttaattgcacttttcccccctatattttgtcaattgtgcgattttgcaccccatgtttttaaacgtgtgattttgcaccctatctttttcccccttt 39691955  T
Q  489 ctgattttatggtcccct 506  Q
    ||||||||||||||||||    
T  39691954 ctgattttatggtcccct 39691937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 450 - 521
Target Start/End: Original strand, 44223745 - 44223815
Alignment:
Q  450 ttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||| | | |||||||||||||||    
T  44223745 ttaaacgagcgattttgccccctatagtttttcccctttctgattttatggt-ctcatgacatttagtgctg 44223815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 49284437 - 49284515
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  49284437 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 49284515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 381 - 495
Target Start/End: Original strand, 6002229 - 6002343
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| ||||||||||||||||||||   |  |||  |||| |||||||| ||||||||| |||||  |||||||||||||||||||| ||| ||  ||||    
T  6002229 ttttttttggcttaattgcacttttcacccctatcttttgtcaattgtgtgattttgcaccccatgtttttaaacgagcgattttgcaccccatcttttt 6002328  T
Q  481 ccccttttctgattt 495  Q
    |||| ||||||||||    
T  6002329 ccccctttctgattt 6002343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 49285081 - 49285003
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||| ||||||||||| ||| ||  |||||||| ||||||||||    
T  49285081 tttgccaattgtgcgattttgcaccccatgtttttaaacaagcgattttgcaccccatctttttccccctttctgattt 49285003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 422 - 495
Target Start/End: Complemental strand, 6002915 - 6002842
Alignment:
Q  422 caattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||  ||  |||||||| ||||||||||    
T  6002915 caattgtgcgattttgcaccccatgtttttaaacgagcgattttgcacctcatctttttccccctttctgattt 6002842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 434 - 497
Target Start/End: Original strand, 6712215 - 6712279
Alignment:
Q  434 tttgcatcccatagttttaaacgagcgatttt-gccccctatagttttccccttttctgatttta 497  Q
    |||||| |||||||||||||||||||||||||  |||||||||||||||||| |||  |||||||    
T  6712215 tttgcaccccatagttttaaacgagcgattttatccccctatagttttcccccttttcgatttta 6712279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 458 - 505
Target Start/End: Original strand, 19007774 - 19007821
Alignment:
Q  458 gcgattttgccccctatagttttccccttttctgattttatggtcccc 505  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||    
T  19007774 gcgattttgccccctatagttttccctctttctgatttgatggtcccc 19007821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 412 - 465
Target Start/End: Original strand, 50949184 - 50949237
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgatttt 465  Q
    |||||| ||||||||||||||||||||| | ||| |||| ||||||||||||||    
T  50949184 tatagtctgccaattgtgcgattttgcacctcattgtttaaaacgagcgatttt 50949237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 388 - 443
Target Start/End: Original strand, 41082908 - 41082963
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc 443  Q
    ||||||||||| |||||||| |  |||  |||||||||||||||||||||||||||    
T  41082908 tggcttaattgtactttttccccctatcttttgccaattgtgcgattttgcatccc 41082963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 524
Target Start/End: Original strand, 50615289 - 50615332
Alignment:
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||    
T  50615289 ccccctttctgattttatggtccccatgacatttaatgctgatg 50615332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 524
Target Start/End: Original strand, 50623117 - 50623160
Alignment:
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||| |||||||||||||||||||| ||||||||| ||||||||    
T  50623117 ccccctttctgattttatggtccccatgacatttaatgctgatg 50623160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 50615240 - 50615289
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgc 438  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||    
T  50615240 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50615289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 438
Target Start/End: Original strand, 50623068 - 50623117
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgc 438  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||    
T  50623068 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgc 50623117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 8109047 - 8108991
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccat 445  Q
    ||||||||||||||||| | |  |||  ||||||||||||||||||||||| |||||    
T  8109047 ggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgcaccccat 8108991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 380 - 521
Target Start/End: Complemental strand, 10348862 - 10348721
Alignment:
Q  380 attttatttggcttaattgcactttttc-tcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtt 478  Q
    ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10348862 attttttttggcttaattgcactttttcctcat-atagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtt 10348764  T
Q  479 ttccccttttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||| ||||| |||||||||||||| |||||||||||||||    
T  10348763 ttccccctttctaattttatggtccccgtgacatttagtgctg 10348721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 389 - 518
Target Start/End: Original strand, 48159897 - 48160026
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  48159897 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 48159996  T
Q  489 ctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||| ||||| ||||||||||||    
T  48159997 ctgattttatgatccccgtgacatttagtg 48160026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 386 - 521
Target Start/End: Complemental strand, 27238957 - 27238822
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||| |||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||     
T  27238957 tttggtttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgctccctatagttttccccc 27238858  T
Q  486 tttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||| ||| |||||||||||||||    
T  27238857 tttctgattttatggttcccatgacatttagtgctg 27238822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 40849015 - 40848881
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| || |||    
T  40849015 ggcttaattgcacttttcccctctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcacccttt 40848916  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||| ||||    
T  40848915 ctgattttatggtccccatgacatttagtgttgat 40848881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 391 - 523
Target Start/End: Complemental strand, 22429647 - 22429516
Alignment:
Q  391 cttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttct 490  Q
    ||||||||||||||  ||| | |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  22429647 cttaattgcactttccctcct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccctttct 22429549  T
Q  491 gattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||| |||||||||||||||||    
T  22429548 gattttatggtccccatgacatttagtgctgat 22429516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 40848521 - 40848652
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| |||    
T  40848521 ggcttaattgcacttttccccct-atagtttgccaattgtgcgattttacaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 40848619  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||| ||||    
T  40848620 ctgattttatggtccccatgacatttagcgctg 40848652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 47666390 - 47666254
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | |  ||||||||||||||||||| |||||||| ||||| |||| ||||||||||||||||||||||||||||||||| ||    
T  47666390 tggcttaattgcacttttcccccctatagtttgccaattgtgcaattttgcaccccattgtttaaaacgagcgattttgccccctatagttttccccctt 47666291  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  47666290 tctgattttatggttcccatgacatttagtgctgatg 47666254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 386 - 518
Target Start/End: Complemental strand, 48160390 - 48160258
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||  | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||     
T  48160390 tttggcttaattgcactttccccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttttcccc 48160291  T
Q  486 tttctgattttatggtccccttgacatttagtg 518  Q
    |||||||||||||| ||||| ||||||||||||    
T  48160290 tttctgattttatgatccccatgacatttagtg 48160258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 382 - 524
Target Start/End: Original strand, 3353121 - 3353260
Alignment:
Q  382 tttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttc 481  Q
    |||||||||||||||||||||||| | | | |||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||    
T  3353121 tttatttggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattt--ccccctatagttttc 3353217  T
Q  482 cccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||| |||||||||||||||||||| ||||||||||| ||||||    
T  3353218 cccctttctgattttatggtccccatgacatttagtactgatg 3353260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 24485044 - 24485155
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||| |||||    
T  24485044 tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgatttcgccccctatagtttttcccctttctgattttatggtccccatgaca 24485143  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  24485144 tttagtgctgat 24485155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 27238488 - 27238599
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||     
T  27238488 tatagtttgccaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgact 27238587  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  27238588 tttagtgctgat 27238599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 36180577 - 36180688
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||    
T  36180577 tatagtttgtcaattgtgcgattttgcatcccatagttttaaacgagcgattttgacccctatagttttccccctttctgattttatggtccccatgaca 36180676  T
Q  512 tttagtgctgat 523  Q
    ||||||| ||||    
T  36180677 tttagtgttgat 36180688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 388 - 523
Target Start/End: Original strand, 42672977 - 42673111
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | | | ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| ||    
T  42672977 tggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcaccccatagttttaaacgatcgattttgccccctatagttttccccctt 42673075  T
Q  488 tctgattttatggtccccttgacatttagtgctgat 523  Q
    | ||||||||||| |||| |||||||||||||||||    
T  42673076 tatgattttatggcccccatgacatttagtgctgat 42673111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 516
Target Start/End: Original strand, 53687888 - 53688015
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||    
T  53687888 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttaccccctatagttttcccccttt 53687987  T
Q  489 ctgattttatggtccccttgacatttag 516  Q
    ||||||||||||||||| ||||||||||    
T  53687988 ctgattttatggtccccatgacatttag 53688015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 381 - 523
Target Start/End: Complemental strand, 24485521 - 24485381
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| ||    
T  24485521 ttttttttggcttaattgcactttt-ctccctatagtttgccaattgtgcgattttgcaccccatagttttaaatgagcgattttgccccctatagtatt 24485423  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||| ||||| |||||||||||||| ||||| |||||||||||    
T  24485422 ccccctttctaattttatggtccccatgaca-ttagtgctgat 24485381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 3353582 - 3353471
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  3353582 tatagtttgccaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtccccatgaca 3353484  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  3353483 tttagtgctgatg 3353471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 386 - 518
Target Start/End: Complemental strand, 42673352 - 42673221
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| | | | |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||     
T  42673352 tttggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccc 42673254  T
Q  486 tttctgattttatggtccccttgacatttagtg 518  Q
    |||||||||||||||||||| | | ||||||||    
T  42673253 tttctgattttatggtccccatcagatttagtg 42673221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 378 - 521
Target Start/End: Complemental strand, 26007686 - 26007541
Alignment:
Q  378 atattttattt--ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctata 475  Q
    |||||||||||  || |||||||||||||||| |  ||||||||||||||||| ||||||||||   |||| ||||||||||||||||||||||||||||    
T  26007686 atattttattttaggtttaattgcactttttccccctatagtttgccaattgtacgattttgcacttcataattttaaacgagcgattttgccccctata 26007587  T
Q  476 gttttccccttttctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||| |||||||||||||||||||| | |||||||||||||    
T  26007586 gttttccccctttctgattttatggtccccataacatttagtgctg 26007541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 390 - 523
Target Start/End: Original strand, 22429159 - 22429292
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    ||||||||||||||||   |  |||| |||||||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||| ||||    
T  22429159 gcttaattgcacttttctcccctatattttgccaattgtgcgactttgcacccaatagttttaaacgagcgattttgtcccctatagttttccccctttc 22429258  T
Q  490 tgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||| |||||||||||||||||    
T  22429259 tgattttatggtccccatgacatttagtgctgat 22429292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 384 - 521
Target Start/End: Complemental strand, 36181049 - 36180912
Alignment:
Q  384 tatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccc 483  Q
    |||| ||||||||||||||||| |||  |||||||||  ||||||||||||||| | |||||||||||||||||||||||||  ||||||||||||| ||    
T  36181049 tattaggcttaattgcacttttcctccctatagtttgttaattgtgcgattttgtaccccatagttttaaacgagcgattttttcccctatagtttttcc 36180950  T
Q  484 cttttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  36180949 cttttctgattttatgatccccatgacatttagtgctg 36180912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 386 - 523
Target Start/End: Original strand, 44007964 - 44008101
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||||||||||||||||| |||  ||||||||  ||||||||| | ||||||||  ||||||||||||||||||||||||||||||||||||| |||     
T  44007964 tttggcttaattgcacttttcctccctatagtttttcaattgtgcaaatttgcatcttatagttttaaacgagcgattttgccccctatagtttttcccc 44008063  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||| ||| |||||||||||||||||    
T  44008064 tttctgattttatggttcccatgacatttagtgctgat 44008101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 386 - 523
Target Start/End: Original strand, 53766160 - 53766296
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||| ||||||||||||||||    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||     
T  53766160 tttggtttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttcccca 53766258  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||| ||||||||||||| || |||||||||||||||||    
T  53766259 tttttgattttatggtctccatgacatttagtgctgat 53766296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 26007204 - 26007315
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||| |||||    
T  26007204 tatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgccctctatagttttccatctttctgattttatggtccccatgaca 26007303  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  26007304 tttagtgctgat 26007315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 53688359 - 53688223
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||||||| || | | |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||||||     
T  53688359 tttggcttaattgcactttctcccct-atagtttgccaattgtgcgattttgcactccatagtttaaaacgagcgattttgccccctatagttttccccc 53688261  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| | | | |||||||||||| ||||    
T  53688260 tttctgattttatgattctcatgacatttagtgttgat 53688223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 390 - 523
Target Start/End: Original strand, 10348480 - 10348613
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    ||||||||||||||||   |  ||||||||| ||||||| | ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||    
T  10348480 gcttaattgcacttttctcccgtatagtttgtcaattgttcaattttgcatcccataattttaaacgagcgattttgtcccctatagtttttcccctttc 10348579  T
Q  490 tgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||| |||||| |||||||||||||||||    
T  10348580 tgattttatagtccccatgacatttagtgctgat 10348613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 421 - 518
Target Start/End: Complemental strand, 42456217 - 42456121
Alignment:
Q  421 ccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||    
T  42456217 ccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtccccatgacatttagtg 42456121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 386 - 521
Target Start/End: Complemental strand, 44008457 - 44008323
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||||||||  || | |||||||||||||||||| |||||||| | ||||||||||||||||| ||||| ||||||||||||||| ||     
T  44008457 tttggcttaattgcacttttcatcct-atagtttgccaattgtgcaattttgcacctcatagttttaaacgagcaatttttccccctatagttttctccc 44008359  T
Q  486 tttctgattttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||||||| | ||||||||| |||||    
T  44008358 tttctgattttatggtcctcgtgacatttaatgctg 44008323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 378 - 524
Target Start/End: Original strand, 47665900 - 47666046
Alignment:
Q  378 atattttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagt 477  Q
    ||||||| || ||||||||||||||||||| | |||||||||| |||||||||||||||||| | ||| |||| ||||||| |||||| || ||||||||    
T  47665900 atatttttttaggcttaattgcactttttccccttatagtttgtcaattgtgcgattttgcacctcattgtttaaaacgagtgattttaccacctatagt 47665999  T
Q  478 tttccccttttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||| ||| |||||||||||| | | |||||||||||| |||||    
T  47666000 tttccccctttttgattttatggttctcatgacatttagtggtgatg 47666046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 387 - 506
Target Start/End: Original strand, 8314011 - 8314130
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||||   |  |||| |||| |||||||||||||||||| || ||  ||||||||| |||||||||| ||||||  |||||||| |    
T  8314011 ttggcttaattgcacttttctcccctatattttgtcaattgtgcgattttgcacccaatgtttttaaacgtgcgattttgcaccctatcattttccccct 8314110  T
Q  487 ttctgattttatggtcccct 506  Q
    |||||||||||||| |||||    
T  8314111 ttctgattttatggccccct 8314130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 388 - 524
Target Start/End: Complemental strand, 21896565 - 21896432
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||| |||||| | | ||| |||| |||||||||||||||||| ||||| |||||| |||||||||||||| ||| ||  |||| ||| ||    
T  21896565 tggcttaattgcattttttcccct-atattttgtcaattgtgcgattttgcaccccatggttttatacgagcgattttgcaccccatcatttttcccatt 21896467  T
Q  488 tctgattttatggtccccttgacatttagtgctgatg 524  Q
    | |||||||||||||||  ||| |||||||| |||||    
T  21896466 tttgattttatggtccc--tgatatttagtgatgatg 21896432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 491
Target Start/End: Complemental strand, 1928460 - 1928386
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    ||||||||||||||||||||||| |||||| ||||||||||| | |||||| ||||||  |||||||||||||||    
T  1928460 tttgccaattgtgcgattttgcaccccatatttttaaacgagtggttttgcaccctatccttttccccttttctg 1928386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 53766633 - 53766511
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||| |||||||| |||||||| || ||||||||||             ||||||||| |||||||| |||    
T  53766633 ggcttaattgcacttttcccccctatagtttgcaaattgtgcaattttgcaccctatagttttaa-----------ctccccctatatttttcccc-ttt 53766546  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  53766545 ctgattttatggtccccatgacatttagtgctgat 53766511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 472 - 523
Target Start/End: Original strand, 42455852 - 42455903
Alignment:
Q  472 tatagttttccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||| ||||    
T  42455852 tatagttttccccctttctgattttatggtccccatgacgtttagtgatgat 42455903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 452
Target Start/End: Original strand, 42455790 - 42455853
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagtttta 452  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||  || |||||||||    
T  42455790 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgccccctatagtttta 42455853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 439
Target Start/End: Complemental strand, 20969076 - 20969023
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgca 439  Q
    |||||||||||||||||||| | |  |||  |||||||||||||||||||||||    
T  20969076 tttggcttaattgcacttttcccccctatcttttgccaattgtgcgattttgca 20969023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 106; Significance: 8e-53; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 106; E-Value: 8e-53
Query Start/End: Original strand, 387 - 520
Target Start/End: Complemental strand, 185330 - 185197
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    ||||||||||||||||||| |||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |    
T  185330 ttggcttaattgcacttttcctccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccctct 185231  T
Q  487 ttctgattttatggtccccttgacatttagtgct 520  Q
    ||||||||||||||||||| ||||||||||||||    
T  185230 ttctgattttatggtccccatgacatttagtgct 185197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 390 - 521
Target Start/End: Original strand, 184840 - 184971
Alignment:
Q  390 gcttaattgcactttttctcat-tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||||||| ||| | ||||||||| ||| ||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||    
T  184840 gcttaattgcactttt-ctcctctatagtttgtcaactgtgcaattttgcaccccatagttttaaacgagcgattttgccacctatagttttcccccttt 184938  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  184939 ctgattttatggtccccatgacatttagtgctg 184971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 1e-51; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 12498982 - 12498847
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||    
T  12498982 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacaagcgattttgccccctatagttttcccccttt 12498883  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  12498882 ctgattttatggtccccatgacatttagtgctgatg 12498847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 26571218 - 26571084
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||    
T  26571218 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcctccttt 26571119  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||||| |||||||||||||||||    
T  26571118 ctgattttatggtccccatgacatttagtgctgat 26571084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 19514549 - 19514660
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  19514549 tatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgaca 19514648  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  19514649 tttagtgctgat 19514660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 392 - 521
Target Start/End: Original strand, 21207229 - 21207358
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | |  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  21207229 ttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcaccctttctg 21207328  T
Q  492 attttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||| |||||||||||||||    
T  21207329 attttatggtccccatgacatttagtgctg 21207358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 392 - 524
Target Start/End: Original strand, 2817152 - 2817283
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| |||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||| ||||||    
T  2817152 ttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccataattttaaacgagcgattttgccccctatatttttcccc-tttctg 2817250  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||| |||||||||||| |||||    
T  2817251 attttatggtccccatgacatttagtgttgatg 2817283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 12498567 - 12498701
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  12498567 ggcttaattgcacttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttcccccttt 12498666  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||  || ||||||||||||||||||    
T  12498667 ctgattttatggt-tccatgacatttagtgctgatg 12498701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 389 - 518
Target Start/End: Complemental strand, 34147564 - 34147435
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||| |||    
T  34147564 ggcttaattgcactttttccccctatagtttgtcaattgtgcgattttgcacctcgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147465  T
Q  489 ctgattttatggtccccttgacatttagtg 518  Q
    ||||||||||||||||| ||||||||||||    
T  34147464 ctgattttatggtccccgtgacatttagtg 34147435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 392 - 524
Target Start/End: Complemental strand, 3888713 - 3888581
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| |   ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3888713 ttaattgcacttttccctcttataatttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttctg 3888614  T
Q  492 attttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||| ||||||||| ||||||||    
T  3888613 attttatggtccccatgacatttaatgctgatg 3888581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 524
Target Start/End: Original strand, 34147141 - 34147274
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| |   |||||||||  |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||    
T  34147141 ggcttaattgcacttttccc--ttatagtttatcaattgtgcgattttgcaccccgtagttttaaacgagcgattttgccccctatagttttcccccttt 34147238  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  34147239 ctgattttatggtccccgtgacatttagtgctgatg 34147274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 389 - 521
Target Start/End: Complemental strand, 43464245 - 43464114
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | | |||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |||    
T  43464245 ggcttaattgcacttttccccct-atagtttgtcaattgtgcgattttgcacctcatagttttaaacgagcgattttgccccctatagttttcccccttt 43464147  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||| |||||||||||||||    
T  43464146 ctgattttatggtccccatgacatttagtgctg 43464114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 387 - 524
Target Start/End: Original strand, 3888237 - 3888373
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    ||||||||||||||| ||| | |  ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  3888237 ttggcttaattgcacatttcccccctatagtttgccaattgtacgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccct 3888336  T
Q  487 ttctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||| ||| |||||||||||| |||||    
T  3888337 ttctgattttatggt-cccatgacatttagtgatgatg 3888373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 390 - 523
Target Start/End: Complemental strand, 22729492 - 22729360
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    |||||||||||||||| | | | ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22729492 gcttaattgcacttttccccct-ataatttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctttc 22729394  T
Q  490 tgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||  |||||||||||| ||||    
T  22729393 tgattttatggtccctatgacatttagtgttgat 22729360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 384 - 521
Target Start/End: Original strand, 26570724 - 26570861
Alignment:
Q  384 tatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccc 483  Q
    |||| ||||||||| ||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  26570724 tattaggcttaattacacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttgtcccctatagttttccc 26570823  T
Q  484 cttttctgattttatggtccccttgacatttagtgctg 521  Q
    | |||||||||||||||||||| |||||||||| ||||    
T  26570824 cctttctgattttatggtccccatgacatttagcgctg 26570861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 389 - 521
Target Start/End: Complemental strand, 19515017 - 19514885
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||| |||    
T  19515017 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagttattttgccccctatagttttcccccttt 19514918  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||| ||| |||||||||||||||    
T  19514917 ctgattttatggttcccatgacatttagtgctg 19514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 41072245 - 41072133
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| ||||||| |||||||||| || ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||    
T  41072245 tatagtttgtcaattgtacgattttgcaccctatagttttaaacgagcgattttgccccctatagttttccccctttctaattttatggtccccatgaca 41072146  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  41072145 tttagtgctgatg 41072133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 392 - 523
Target Start/End: Complemental strand, 10098991 - 10098861
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| ||| | |||||||| |||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  10098991 ttaattgcacttttcctcct-atagtttgtcaattgtgcgattttgcaccccatagttttaaacgagcgattttatcccctatagttttccctctttctg 10098893  T
Q  492 attttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| ||||||||||| |||||    
T  10098892 attttatggtccccatgacatttagtactgat 10098861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 392 - 521
Target Start/End: Complemental strand, 11317025 - 11316896
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||||  |  | || ||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||  ||||||    
T  11317025 ttaattgcacttttttcctctgtactttgccaattgtgcgattttgcaccccattgttttaaatgagcgattttgccccctatagttttccctctttctg 11316926  T
Q  492 attttatggtccccttgacatttagtgctg 521  Q
    |||||||||||||| |||||||||||||||    
T  11316925 attttatggtccccatgacatttagtgctg 11316896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 386 - 518
Target Start/End: Original strand, 30401879 - 30402010
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||| |||||||||||||| |||  ||||||||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||| ||||||||     
T  30401879 tttggtttaattgcacttttcctctctatagtttgccaattgtacaattttgcatcccatagttttaaactagcgattttgccccctataattttcccc- 30401977  T
Q  486 tttctgattttatggtccccttgacatttagtg 518  Q
    ||| |||||||||||||||| ||| ||||||||    
T  30401978 tttatgattttatggtccccatgatatttagtg 30402010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 387 - 521
Target Start/End: Original strand, 22729006 - 22729138
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    ||||||||||||||||||| | | | ||||||||  |||||||||||||||||   |||||||||||||||||||||||||||| ||||||||||||| |    
T  22729006 ttggcttaattgcacttttccccct-atagtttgtaaattgtgcgattttgcacttcatagttttaaacgagcgattttgcccc-tatagttttccccct 22729103  T
Q  487 ttctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||||| |||||||||||||||    
T  22729104 ttctgattttatggtccccatgacatttagtgctg 22729138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 37780799 - 37780664
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||| |||||| | |  |||||||||| ||||||||||||||||| | ||| |||||||||||||||||||| ||||||||| |||||||     
T  37780799 tttggcttaattgtacttttcccccctatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttg-cccctatag-tttccccc 37780702  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37780701 tttctgattttatggtccccatgacatttagtgctgat 37780664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 392 - 497
Target Start/End: Original strand, 43463759 - 43463863
Alignment:
Q  392 ttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctg 491  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  43463759 ttaattgcacttttcccc-ttatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttctccctttctg 43463857  T
Q  492 atttta 497  Q
    ||||||    
T  43463858 atttta 43463863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 389 - 505
Target Start/End: Original strand, 25940521 - 25940637
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||| |||||  |  ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| || |||    
T  25940521 ggcttaattgcatttttttcccctatagtttgtcaattgtgcgattttgcaccctatagttttaaacgagcgattttgccccctatagttttcacccttt 25940620  T
Q  489 ctgattttatggtcccc 505  Q
    |||||||||||||||||    
T  25940621 ctgattttatggtcccc 25940637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 412 - 518
Target Start/End: Complemental strand, 37610649 - 37610544
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  37610649 tatagtttgctaattgtgcgattttgcacctcattgttttaaacgagcgattttgccccctatag-tttccccctttctgattttatggtccccatgaca 37610551  T
Q  512 tttagtg 518  Q
    |||||||    
T  37610550 tttagtg 37610544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 381 - 500
Target Start/End: Complemental strand, 25941076 - 25940956
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| ||| |||||||||||||||| |    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25941076 tttttttttgcttaattgcacttttccctcctatagtttgttaattatgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 25940977  T
Q  481 -ccccttttctgattttatgg 500  Q
     |||| |||||||||||||||    
T  25940976 cccccctttctgattttatgg 25940956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 389 - 483
Target Start/End: Original strand, 37780320 - 37780413
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccc 483  Q
    ||||||||||||||||| | | | ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37780320 ggcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccc 37780413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 386 - 524
Target Start/End: Complemental strand, 2817631 - 2817495
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||| ||||||||||||||| | | | ||||||||| |||||||||||||| ||||| |||||||||||||||||||||||| |||||||  ||||||      
T  2817631 tttgacttaattgcacttttccccct-atagtttgcgaattgtgcgattttacatccaatagttttaaacgagcgattttgctccctata-atttccctc 2817534  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
     |||| |||||||||||||| ||||||||||| ||||||    
T  2817533 cttctaattttatggtccccatgacatttagtactgatg 2817495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 389 - 483
Target Start/End: Original strand, 37610202 - 37610295
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccc 483  Q
    ||||||||||||||||| | | | ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  37610202 ggcttaattgcacttttccccct-atagtttgccaattgtgtgattttgcaccccatagttttaaacgagcgattttgccccttatagttttccc 37610295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 387 - 472
Target Start/End: Original strand, 10098517 - 10098602
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccct 472  Q
    |||||||||||||||||||||    ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  10098517 ttggcttaattgcactttttcctcctatagtttgtcaattgtgcgattttgcatcctatagttttaaacgagcgattttgccccct 10098602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 453 - 523
Target Start/End: Complemental strand, 25940955 - 25940885
Alignment:
Q  453 aacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||||||    
T  25940955 aacgagcgattttgccccctatagttttccccctttctgattttatggtccccatgatatatagtgctgat 25940885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 412 - 484
Target Start/End: Original strand, 11316737 - 11316809
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccc 484  Q
    ||||||||||||||||| | ||||||||||| ||| |||||||||||| ||||||||||||||||||||||||    
T  11316737 tatagtttgccaattgtacaattttgcatcctataattttaaacgagcaattttgccccctatagttttcccc 11316809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 387 - 495
Target Start/End: Complemental strand, 18817667 - 18817559
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||||   |  |||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| |    
T  18817667 ttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccct 18817568  T
Q  487 ttctgattt 495  Q
    |||||||||    
T  18817567 ttctgattt 18817559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 389 - 506
Target Start/End: Original strand, 42919305 - 42919421
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||| ||||||| | | ||| ||| |||||||||||||||| || | |||  |||||||||||||||||||| ||||||  |||| ||| |||    
T  42919305 ggcttaattgctctttttcccct-atatttttccaattgtgcgatttttcaccacatgtttttaaacgagcgattttgcaccctatcatttttccccttt 42919403  T
Q  489 ctgattttatggtcccct 506  Q
    ||||||||||||| ||||    
T  42919404 ctgattttatggttccct 42919421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 18816980 - 18817058
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  ||||||||||||||||||||  || ||  |||||||| ||||||||||    
T  18816980 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcatcccatctttttccccctttctgattt 18817058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 417 - 465
Target Start/End: Complemental strand, 11351453 - 11351405
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgatttt 465  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  11351453 tttgccaattgtgcgattttgcaccccatatttttaaacgagcgatttt 11351405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 417 - 495
Target Start/End: Original strand, 11350836 - 11350913
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    |||||||||||||| |||||||| |||||| |||||||||||||||||||| ||| ||  |||||||| ||| ||||||    
T  11350836 tttgccaattgtgc-attttgcaccccatatttttaaacgagcgattttgcaccccatctttttccccctttttgattt 11350913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 486 - 523
Target Start/End: Original strand, 10098602 - 10098639
Alignment:
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||| |||||||||||| ||||    
T  10098602 tttctgattttatggtccccatgacatttagtgatgat 10098639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 441
Target Start/End: Complemental strand, 16466796 - 16466744
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatc 441  Q
    ||||||||||||||||| | |  |||| ||||| |||||||||||||||||||    
T  16466796 ggcttaattgcacttttcccccctatattttgctaattgtgcgattttgcatc 16466744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 26020450 - 26020506
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccat 445  Q
    ||||||||||||||||| |||  |||  ||||| ||||||||||||||||| |||||    
T  26020450 ggcttaattgcacttttcctccctatcttttgctaattgtgcgattttgcaccccat 26020506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 3e-49; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 388 - 523
Target Start/End: Complemental strand, 33974354 - 33974219
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||| |||| | |  |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  33974354 tggcttaattgcatttttcccccctatagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 33974255  T
Q  488 tctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||||||||| || |||||||||||||||||    
T  33974254 tctgattttatggtctccatgacatttagtgctgat 33974219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 32734053 - 32733916
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||| |||||||||||||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||     
T  32734053 tttggtttaattgcacttttcctccctatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctataattttctccc 32733954  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||| ||| ||| |||||||||||||    
T  32733953 tttctgattttatggttcccatgatatttagtgctgat 32733916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 389 - 524
Target Start/End: Complemental strand, 7654602 - 7654467
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | |  ||||||||| |||||||||||||||||| |||||||||||||||||| || |||||||||||||||||||||| |||    
T  7654602 ggcttaattgcacttttcccccctatagtttgtcaattgtgcgattttgcaccccatagttttaaacgagtgactttgccccctatagttttcccccttt 7654503  T
Q  489 ctgattttatggtccccttgacatttagtgctgatg 524  Q
    ||||||||||||||||| ||||||||||||||||||    
T  7654502 ctgattttatggtccccatgacatttagtgctgatg 7654467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 388 - 523
Target Start/End: Complemental strand, 10087913 - 10087779
Alignment:
Q  388 tggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    |||||||||||||||||| | |  | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  10087913 tggcttaattgcacttttcccccctttagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagttttccccctt 10087814  T
Q  488 tctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||| | | |||||||||||||||||    
T  10087813 tctgattttatggt-ctcatgacatttagtgctgat 10087779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 390 - 523
Target Start/End: Complemental strand, 22755142 - 22755010
Alignment:
Q  390 gcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttc 489  Q
    |||||||||||||||| | | |||||||||| ||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||    
T  22755142 gcttaattgcacttttcccctttatagtttgtcaattatgcgattttgcaccacatagttttaaacgagcgattttgccccctatagttttcccc-tttc 22755044  T
Q  490 tgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||| |||||| |||||||||||||||||    
T  22755043 tgattttattgtccccatgacatttagtgctgat 22755010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 381 - 521
Target Start/End: Complemental strand, 22684419 - 22684280
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| | | ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  22684419 ttttttttggcttaattgcacttttcccc-ttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttt 22684321  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctg 521  Q
     ||| |||||||||||||||||||| ||| |||||||||||    
T  22684320 tcccctttctgattttatggtccccatgatatttagtgctg 22684280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 381 - 521
Target Start/End: Original strand, 22754649 - 22754788
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagtttt 480  Q
    |||| |||||||||||||||||||| | | ||||||||||||||||||| ||||||||| ||||||||||||||| | ||||||||||||||||||||||    
T  22754649 ttttttttggcttaattgcacttttcccc-ttatagtttgccaattgtgtgattttgcaccccatagttttaaacaaacgattttgccccctatagtttt 22754747  T
Q  481 ccccttttctgattttatggtccccttgacatttagtgctg 521  Q
     ||| |||||||||||||||||||| ||| |||||||||||    
T  22754748 tcccctttctgattttatggtccccatgatatttagtgctg 22754788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 386 - 524
Target Start/End: Original strand, 2354406 - 2354543
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||| |||||| |  ||||||||  ||||||| |||||||||||||||| |||| |||||||||||||| ||||||||||||||||||     
T  2354406 tttggcttaattgca-tttttccccctatagtttttcaattgtacgattttgcatcccattgtttaaaacgagcgatttttccccctatagttttccccc 2354504  T
Q  486 tttctgattttatggtccccttgacatttagtgctgatg 524  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  2354505 tttctgattttatggttcccatgacatttagtgctgatg 2354543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 386 - 523
Target Start/End: Original strand, 13176617 - 13176753
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    |||||| ||||||| |||||| ||  ||||||||||||||||| |||||||| |||||||  ||||||| ||||||||||||||||||||||||||||      
T  13176617 tttggcataattgcccttttt-tccctatagtttgccaattgtacgattttgtatcccatgattttaaatgagcgattttgccccctatagttttcccac 13176715  T
Q  486 tttctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||||| |||||||||||||||||    
T  13176716 tttctgattttatggtccccgtgacatttagtgctgat 13176753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 29074403 - 29074291
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||| | ||| |||||    
T  29074403 tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgaca 29074304  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  29074303 tttagtgctgatg 29074291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 29079167 - 29079055
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||| | ||| |||||    
T  29079167 tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgaca 29079068  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  29079067 tttagtgctgatg 29079055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 29106976 - 29106864
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| || |||||||||||||| | ||| |||||    
T  29106976 tatagtttgccaattgtgcgattttgcaccccatagtttaaaacgagcgattttcccccctatagttttcgccctttctgattttatgattcccatgaca 29106877  T
Q  512 tttagtgctgatg 524  Q
    |||||||||||||    
T  29106876 tttagtgctgatg 29106864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 32733580 - 32733691
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| |||||||||||||||| ||| |||||    
T  32733580 tatagtttgccaattatacgattttgcatcccatagttttaaacgagcaattttgcctcctatagtttttcccctttctgattttatggttcccatgaca 32733679  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  32733680 tttagtgctgat 32733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 412 - 524
Target Start/End: Complemental strand, 2354841 - 2354730
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||||| |||||||||||||||||||||||| ||  |||||||||||| ||| |||||    
T  2354841 tatagtttgtcaattgtgcgattttgcaccccattgtttaaaacgagccattttgccccctatagttttcccc-ttcatgattttatggttcccatgaca 2354743  T
Q  512 tttagtgctgatg 524  Q
    |||| ||||||||    
T  2354742 tttaatgctgatg 2354730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 412 - 515
Target Start/End: Complemental strand, 13177087 - 13176984
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    |||||| || |||||||| |||||| || | |||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||| |||||    
T  13177087 tatagtatgtcaattgtgagattttacacctcatagttttaaacgagcgattttgccccttatagttgtccccctttctgattttatggtccccatgaca 13176988  T
Q  512 ttta 515  Q
    ||||    
T  13176987 ttta 13176984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 386 - 495
Target Start/End: Original strand, 33828987 - 33829096
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccct 485  Q
    ||||||||||||||||||||   |  |||  ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  ||||||||     
T  33828987 tttggcttaattgcacttttcacccctatcttttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccc 33829086  T
Q  486 tttctgattt 495  Q
    ||||||||||    
T  33829087 tttctgattt 33829096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 412 - 518
Target Start/End: Original strand, 33973887 - 33973991
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| || ||||||||||||| |    ||||||||| ||||||||||||| ||||||||||||| ||  ||||| |||||||||||||| |||||    
T  33973887 tatagtttgtcagttgtgcgattttgtactttatagttttacacgagcgattttgtcccctatagtttttcc--tttctaattttatggtccccatgaca 33973984  T
Q  512 tttagtg 518  Q
    |||||||    
T  33973985 tttagtg 33973991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 33829662 - 33829584
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  33829662 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 33829584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 381 - 439
Target Start/End: Complemental strand, 18242218 - 18242160
Alignment:
Q  381 ttttatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgca 439  Q
    |||| ||||||||||||||| ||||| ||  |||  |||||||||||||||||||||||    
T  18242218 ttttttttggcttaattgcattttttttccctatcttttgccaattgtgcgattttgca 18242160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 95; Significance: 3e-46; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 38749 - 38615
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||    
T  38749 ggcttaattgcactttttccccctatagtttgccaattgtgcgattttgcaccccatagtcttaaacgaacgattttgccccctatagttttcccccttt 38650  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||| ||| || |||||||||||||||||    
T  38649 ctgattttatagtctccatgacatttagtgctgat 38615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 422 - 523
Target Start/End: Original strand, 38284 - 38385
Alignment:
Q  422 caattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtgctg 521  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||    
T  38284 caattgtgcgattttgcatcccatagttttaaatgagcgattttgccccctatagttttccctctttctgattttatggtccccatgacatttagtgctg 38383  T
Q  522 at 523  Q
    ||    
T  38384 at 38385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 92; Significance: 2e-44; HSPs: 3)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 389 - 523
Target Start/End: Original strand, 9905 - 10040
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc-atagttttaaacgagcgattttgccccctatagttttccccttt 487  Q
    ||||||||||||||||||| |  ||||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  9905 ggcttaattgcactttttccccctatagtttgccaattgtgcgatttttcacccccatagttttaaacgagcgattttgccccctatagttttccccctt 10004  T
Q  488 tctgattttatggtccccttgacatttagtgctgat 523  Q
    |||||||||||||||||| | |||||||||| ||||    
T  10005 tctgattttatggtccccataacatttagtgttgat 10040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 459 - 523
Target Start/End: Complemental strand, 10332 - 10268
Alignment:
Q  459 cgattttgccccctatagttttccccttttctgattttatggtccccttgacatttagtgctgat 523  Q
    ||||||||| |||||||||||||||| |||||||||||||||||||| | |||||||||| ||||    
T  10332 cgattttgcaccctatagttttccccctttctgattttatggtccccataacatttagtgttgat 10268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 384 - 451
Target Start/End: Complemental strand, 10376 - 10311
Alignment:
Q  384 tatttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagtttt 451  Q
    |||| |||||||| |||||||| | |  ||||||||||||||||| |||||||||| || ||||||||    
T  10376 tattaggcttaatagcacttttcccc--tatagtttgccaattgtccgattttgcaccctatagtttt 10311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 87; Significance: 2e-41; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 386 - 523
Target Start/End: Complemental strand, 50563 - 50426
Alignment:
Q  386 tttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc-atagttttaaacgagcgattttgccccctatagttttcccc 484  Q
    |||||||||||||||||||| | | | ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||||||||||||| ||||    
T  50563 tttggcttaattgcacttttccccct-atagtttgccaattgtgcgattttgcacccccatagttttaaacgagcaattttgccccctatagtttacccc 50465  T
Q  485 ttttctgattttatggtccccttgacatttagtgctgat 523  Q
     |||||||||||||||||||| ||||||||| |||||||    
T  50464 ctttctgattttatggtccccatgacatttaatgctgat 50426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 412 - 523
Target Start/End: Original strand, 50096 - 50206
Alignment:
Q  412 tatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattttatggtccccttgaca 511  Q
    ||||||||| ||||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||    
T  50096 tatagtttgtcaattgtgcaattttgcaccccatagttttaaacgagcgattttgccccctgtagttttcccc-tttctgattttatggtccctatgaca 50194  T
Q  512 tttagtgctgat 523  Q
    ||||||||||||    
T  50195 tttagtgctgat 50206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 85; Significance: 3e-40; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 389 - 521
Target Start/End: Original strand, 19621 - 19752
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    |||||||||||| |||| | ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||| |||    
T  19621 ggcttaattgcaattttccccat-atagtttgccaattgtgcgattttgcaccccatagttttaaacgagcgattttgccccctatagtttctccccttt 19719  T
Q  489 ctgattttatggtccccttgacatttagtgctg 521  Q
    || |||||||||||||| ||||||||| |||||    
T  19720 ctaattttatggtccccatgacatttaatgctg 19752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 389 - 523
Target Start/End: Complemental strand, 20097 - 19964
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctttt 488  Q
    ||||||||||||||||| | | |||||||||| |||||||||||||||||  |||||||||||||||   ||||||||||||||||||||| ||||||||    
T  20097 ggcttaattgcacttttcccccttatagtttgtcaattgtgcgattttgccccccatagttttaaactgacgattttgccccctatagtttccccctttt 19998  T
Q  489 ctgattttatggtccccttgacatttagtgctgat 523  Q
     |||||||||||||||  |||||||||||| ||||    
T  19997 -tgattttatggtccctatgacatttagtgttgat 19964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 495
Target Start/End: Complemental strand, 6821 - 6743
Alignment:
Q  417 tttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttccccttttctgattt 495  Q
    ||||||||||||||||||||||| |||||  |||||||||||||||||||| ||| ||  |||||||| ||||||||||    
T  6821 tttgccaattgtgcgattttgcaccccatgtttttaaacgagcgattttgcaccccatctttttccccctttctgattt 6743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 387 - 495
Target Start/End: Original strand, 6150 - 6258
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatcccatagttttaaacgagcgattttgccccctatagttttcccctt 486  Q
    |||||||||||||||||||   |  |||  ||||| |||||||||||||| || |||||| ||||||| |||||||||||| ||| ||  |||||||| |    
T  6150 ttggcttaattgcacttttcacctctatcttttgctaattgtgcgattttacaccccatatttttaaatgagcgattttgcaccccatctttttccccct 6249  T
Q  487 ttctgattt 495  Q
    |||||||||    
T  6250 ttctgattt 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 443
Target Start/End: Complemental strand, 439253 - 439199
Alignment:
Q  389 ggcttaattgcactttttctcattatagtttgccaattgtgcgattttgcatccc 443  Q
    ||||||||||||||||||| | ||||  ||||| |||||||||||||||||||||    
T  439253 ggcttaattgcactttttccccttatcttttgctaattgtgcgattttgcatccc 439199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0802 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0802
Description:

Target: scaffold0802; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 387 - 439
Target Start/End: Complemental strand, 1476 - 1424
Alignment:
Q  387 ttggcttaattgcactttttctcattatagtttgccaattgtgcgattttgca 439  Q
    ||||||||||||||||||||| |  |||  |||||||||||||||||||||||    
T  1476 ttggcttaattgcactttttccccctatcttttgccaattgtgcgattttgca 1424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University