View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5751_low_15 (Length: 389)
Name: NF5751_low_15
Description: NF5751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5751_low_15 |
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Alignment Details
Target: chr7 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 20 - 378
Target Start/End: Complemental strand, 24914419 - 24914062
Alignment:
| Q |
20 |
cttaatagctttaaaatcatttgatatttgaatacataatttatcttttggaatgttaagtttggcatcttatctatttgcatgtccattttaattttta |
119 |
Q |
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| T |
24914419 |
cttagtagctttaaaatcatttgatatttgaatacataatttatcttttggaatgttaagcttggcatcttatctatttgcatgtccagtttaattttta |
24914320 |
T |
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| Q |
120 |
aagcatctcctttgaactttgcattttgcttttggcagcaattttagaggccgcaaaggccctattggagcataacaaacatctcttgagtttcatcgat |
219 |
Q |
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| T |
24914319 |
aagcatctcctttgaactttgcattttgcttttggcagcaattttagaggccgcaaaggcactattggagcacaacaaacagctcttaagtttaatcgat |
24914220 |
T |
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| Q |
220 |
ggaaatcttgcttctattgagacttttaattcaacaaaggtaaatcttgctgtttttgatctgaactgattttgttaaacctattgtacataaaaataat |
319 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
24914219 |
ggaaatcttgcttctattgagacttttaattcaacgaaggtaaatcttgctg-ttttgatctgaactgatttagttaaacctattgtacatgaaaataat |
24914121 |
T |
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| Q |
320 |
ctcctttgttatgtcataatcaatgttctattactggttttcaatcttatatctatatt |
378 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24914120 |
ctcctttgttatgtcataatcaatgttctattactggttttcaatcttatatctatatt |
24914062 |
T |
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