View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5751_low_36 (Length: 260)
Name: NF5751_low_36
Description: NF5751
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5751_low_36 |
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Alignment Details
Target: chr3 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 51459225 - 51458973
Alignment:
| Q |
1 |
aaagaagaaatgttaaaattttcaattaattcattaagattaggttgaaaatatggaaggttgacccacctccgaattagcttgggaaaagtatacagag |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
51459225 |
aaagaagaaaggttaaaattttcaattaattcattaagattaggttgaaaatatggaaggttgacccacctccgaattagtttgggaaaagtatacagag |
51459126 |
T |
|
| Q |
101 |
ccaccaaaatacactacgcaacttggtagctaatggagtacagaatcagaaattatcaaagttcataaccagttaggagattattgtcttcatgtcttgc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
51459125 |
ccaccaaaatacactacgcaacttggtagctaatggagtacagaatgagaaattatcaaagttcataaccagttaggagattattgtctttatgtcttgc |
51459026 |
T |
|
| Q |
201 |
ttcaccaccctctagctagtctagtatttatgctgttttaattctaacctttg |
253 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
51459025 |
ttcaccaccctctagctagtctagtatttatgctgttttaattctaacctttg |
51458973 |
T |
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