View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5752-Insertion-8 (Length: 207)
Name: NF5752-Insertion-8
Description: NF5752
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5752-Insertion-8 |
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Alignment Details
Target: chr1 (Bit Score: 59; Significance: 3e-25; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 99
Target Start/End: Complemental strand, 11358150 - 11358060
Alignment:
| Q |
8 |
acatgtatataacaacaacaaaaaatcagaaactattctgatggtgtagcccagtggattaacnnnnnnnccatgtctaggtttgatccatc |
99 |
Q |
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| T |
11358150 |
acatgtatataa-aacaacaaaaaatcagaaactattctgatggtgtagctcagtggattaacaaaaaaaccatgtctaggtttgatccatc |
11358060 |
T |
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Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 207
Target Start/End: Complemental strand, 11357992 - 11357952
Alignment:
| Q |
167 |
ctatacccaaatggccacgcttagctgcaacatgaaatgca |
207 |
Q |
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| T |
11357992 |
ctatacccaaatggccacgcttagctgcaacgtgaaatgca |
11357952 |
T |
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