View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5753-Insertion-2 (Length: 885)

Name: NF5753-Insertion-2
Description: NF5753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5753-Insertion-2
NF5753-Insertion-2
[»] chr6 (53 HSPs)
chr6 (8-806)||(12194417-12195221)
chr6 (624-771)||(17027407-17027554)
chr6 (624-806)||(20850410-20850591)
chr6 (624-771)||(9352185-9352332)
chr6 (617-767)||(31415958-31416107)
chr6 (624-806)||(13191389-13191570)
chr6 (624-766)||(23986193-23986335)
chr6 (624-769)||(13492457-13492603)
chr6 (624-806)||(13492878-13493060)
chr6 (624-806)||(7911967-7912148)
chr6 (624-771)||(7912433-7912580)
chr6 (624-770)||(2890715-2890861)
chr6 (624-806)||(20896563-20896745)
chr6 (618-771)||(2720433-2720586)
chr6 (624-767)||(9440185-9440328)
chr6 (624-766)||(9440733-9440875)
chr6 (624-770)||(11062409-11062555)
chr6 (624-775)||(28583082-28583234)
chr6 (624-763)||(17730985-17731124)
chr6 (632-771)||(28780233-28780372)
chr6 (624-806)||(23776530-23776710)
chr6 (672-771)||(15929705-15929804)
chr6 (610-689)||(20126044-20126123)
chr6 (617-771)||(1991676-1991830)
chr6 (624-771)||(2681096-2681239)
chr6 (612-689)||(2891158-2891235)
chr6 (617-690)||(15929343-15929416)
chr6 (708-806)||(16520057-16520154)
chr6 (624-681)||(27334306-27334363)
chr6 (624-681)||(27395046-27395103)
chr6 (831-874)||(2720636-2720679)
chr6 (557-600)||(28063171-28063214)
chr6 (624-770)||(17205462-17205608)
chr6 (610-675)||(3653117-3653182)
chr6 (831-884)||(6330984-6331037)
chr6 (831-875)||(14771791-14771835)
chr6 (557-597)||(21862461-21862501)
chr6 (557-597)||(33424155-33424195)
chr6 (834-885)||(12194350-12194400)
chr6 (834-884)||(13492810-13492860)
chr6 (831-873)||(21312003-21312045)
chr6 (831-885)||(32292905-32292959)
chr6 (831-884)||(17027603-17027656)
chr6 (831-884)||(17731185-17731238)
chr6 (831-880)||(20850346-20850395)
chr6 (618-770)||(17851042-17851194)
chr6 (617-769)||(28065705-28065856)
chr6 (746-806)||(3652575-3652634)
chr6 (612-686)||(26380920-26380994)
chr6 (831-884)||(2890911-2890964)
chr6 (831-884)||(20896760-20896813)
chr6 (831-884)||(23776462-23776515)
chr6 (735-776)||(33774989-33775030)
[»] chr7 (53 HSPs)
chr7 (624-806)||(28495943-28496124)
chr7 (610-771)||(7646538-7646699)
chr7 (624-806)||(2193345-2193526)
chr7 (624-806)||(2189233-2189414)
chr7 (624-771)||(34405467-34405614)
chr7 (624-806)||(42515633-42515814)
chr7 (624-806)||(2941633-2941814)
chr7 (624-771)||(7646354-7646501)
chr7 (624-806)||(9125048-9125229)
chr7 (624-765)||(18833415-18833556)
chr7 (624-771)||(13122380-13122528)
chr7 (624-771)||(13125011-13125159)
chr7 (624-806)||(36422341-36422521)
chr7 (610-806)||(6718937-6719131)
chr7 (611-771)||(22529098-22529258)
chr7 (610-770)||(29038882-29039042)
chr7 (624-806)||(28495495-28495665)
chr7 (610-771)||(37671625-37671784)
chr7 (610-771)||(42515215-42515376)
chr7 (617-766)||(5406456-5406606)
chr7 (610-771)||(2466047-2466207)
chr7 (636-771)||(43776178-43776313)
chr7 (708-806)||(2465822-2465919)
chr7 (610-771)||(3305210-3305371)
chr7 (624-681)||(36422595-36422652)
chr7 (624-689)||(43233162-43233227)
chr7 (624-720)||(26419111-26419207)
chr7 (610-681)||(6747938-6748009)
chr7 (609-805)||(35473982-35474177)
chr7 (612-689)||(2611523-2611600)
chr7 (831-884)||(25182382-25182435)
chr7 (831-884)||(42515113-42515166)
chr7 (831-883)||(2193278-2193330)
chr7 (633-771)||(25182484-25182622)
chr7 (557-597)||(21814323-21814363)
chr7 (557-597)||(26403398-26403438)
chr7 (633-765)||(29357341-29357473)
chr7 (557-597)||(46963239-46963279)
chr7 (710-806)||(9623297-9623391)
chr7 (831-874)||(35474193-35474236)
chr7 (612-775)||(37672279-37672442)
chr7 (708-766)||(1628841-1628899)
chr7 (831-880)||(13124773-13124822)
chr7 (831-884)||(42515565-42515618)
chr7 (708-770)||(679940-680002)
chr7 (559-597)||(15614425-15614463)
chr7 (831-881)||(26421832-26421882)
chr7 (831-884)||(2941829-2941882)
chr7 (617-662)||(6747475-6747520)
chr7 (831-872)||(13125208-13125249)
chr7 (831-884)||(28495680-28495733)
chr7 (708-769)||(46425866-46425927)
chr7 (568-597)||(48643528-48643557)
[»] chr5 (48 HSPs)
chr5 (624-806)||(3886477-3886658)
chr5 (624-806)||(8641911-8642091)
chr5 (624-806)||(34371701-34371882)
chr5 (624-806)||(2474494-2474675)
chr5 (624-806)||(17445331-17445512)
chr5 (629-769)||(8391203-8391343)
chr5 (624-771)||(3886933-3887080)
chr5 (612-769)||(18750060-18750217)
chr5 (624-771)||(189191-189338)
chr5 (610-770)||(29679969-29680129)
chr5 (624-766)||(30684432-30684574)
chr5 (624-806)||(42788522-42788703)
chr5 (624-806)||(2474048-2474219)
chr5 (624-806)||(34372157-34372338)
chr5 (624-771)||(15512888-15513035)
chr5 (632-771)||(18304554-18304693)
chr5 (610-770)||(1822030-1822190)
chr5 (618-806)||(22556625-22556813)
chr5 (624-764)||(30684887-30685027)
chr5 (624-766)||(24182122-24182264)
chr5 (624-763)||(22557100-22557240)
chr5 (624-764)||(30720136-30720276)
chr5 (624-770)||(10927279-10927425)
chr5 (708-806)||(2193905-2194002)
chr5 (668-805)||(21886066-21886202)
chr5 (624-775)||(11757157-11757308)
chr5 (624-771)||(20858418-20858564)
chr5 (624-766)||(30719681-30719823)
chr5 (617-770)||(5785969-5786122)
chr5 (609-770)||(20039337-20039497)
chr5 (655-761)||(16370618-16370724)
chr5 (831-884)||(22975082-22975135)
chr5 (557-597)||(24137493-24137533)
chr5 (831-883)||(34867812-34867864)
chr5 (831-874)||(1821937-1821980)
chr5 (624-685)||(2194013-2194074)
chr5 (831-884)||(3887129-3887182)
chr5 (831-884)||(8642106-8642159)
chr5 (624-673)||(21883961-21884010)
chr5 (835-883)||(22556558-22556606)
chr5 (610-681)||(1880289-1880360)
chr5 (624-675)||(34867997-34868048)
chr5 (567-597)||(9512364-9512394)
chr5 (831-873)||(21886218-21886260)
chr5 (831-884)||(189089-189142)
chr5 (743-772)||(4673466-4673495)
chr5 (831-880)||(10927475-10927524)
chr5 (835-880)||(22556994-22557039)
[»] chr1 (58 HSPs)
chr1 (624-806)||(20056692-20056873)
chr1 (624-806)||(20054412-20054593)
chr1 (624-806)||(20054868-20055049)
chr1 (624-806)||(20055324-20055505)
chr1 (624-806)||(20055780-20055961)
chr1 (624-806)||(20056236-20056417)
chr1 (624-806)||(20057139-20057320)
chr1 (624-806)||(20057595-20057776)
chr1 (624-806)||(16451809-16451990)
chr1 (624-806)||(16460962-16461143)
chr1 (624-806)||(20845537-20845718)
chr1 (624-806)||(38340995-38341176)
chr1 (624-806)||(50002951-50003132)
chr1 (624-771)||(51372750-51372897)
chr1 (624-806)||(20060216-20060397)
chr1 (624-806)||(52250295-52250476)
chr1 (609-806)||(50002568-50002764)
chr1 (624-771)||(46693611-46693758)
chr1 (624-771)||(52250666-52250813)
chr1 (624-771)||(52251003-52251150)
chr1 (624-806)||(20053956-20054137)
chr1 (624-775)||(7229819-7229970)
chr1 (624-806)||(35759484-35759665)
chr1 (617-720)||(7547811-7547914)
chr1 (632-762)||(16907366-16907497)
chr1 (611-770)||(43056928-43057087)
chr1 (624-720)||(31822995-31823091)
chr1 (629-770)||(23180854-23180995)
chr1 (831-883)||(20845733-20845785)
chr1 (624-675)||(35759940-35759991)
chr1 (612-770)||(43057387-43057545)
chr1 (831-884)||(35760986-35761039)
chr1 (831-883)||(20054152-20054204)
chr1 (831-883)||(20054608-20054660)
chr1 (831-883)||(20055064-20055116)
chr1 (831-883)||(20055520-20055572)
chr1 (831-883)||(20055976-20056028)
chr1 (831-883)||(20056432-20056484)
chr1 (831-883)||(20057335-20057387)
chr1 (715-767)||(31822630-31822682)
chr1 (831-883)||(38340928-38340980)
chr1 (617-772)||(35168629-35168782)
chr1 (831-881)||(30873022-30873072)
chr1 (624-682)||(49996556-49996614)
chr1 (698-775)||(8278076-8278153)
chr1 (831-884)||(35759680-35759733)
chr1 (831-884)||(43057595-43057648)
chr1 (557-597)||(11993524-11993564)
chr1 (831-883)||(20057791-20057843)
chr1 (566-597)||(10354265-10354296)
chr1 (567-597)||(11749775-11749805)
chr1 (709-771)||(50002246-50002308)
chr1 (831-880)||(2328340-2328389)
chr1 (831-880)||(16907259-16907308)
chr1 (831-884)||(20061263-20061316)
chr1 (831-880)||(31822735-31822784)
chr1 (610-675)||(35009870-35009935)
chr1 (831-884)||(50002779-50002832)
[»] chr3 (59 HSPs)
chr3 (624-768)||(14820280-14820424)
chr3 (624-806)||(13150430-13150611)
chr3 (624-806)||(31284152-31284333)
chr3 (624-806)||(50347835-50348016)
chr3 (624-771)||(8067403-8067550)
chr3 (624-806)||(11179910-11180091)
chr3 (628-806)||(28561835-28562011)
chr3 (624-769)||(32386610-32386755)
chr3 (624-771)||(16811504-16811649)
chr3 (624-771)||(27187205-27187353)
chr3 (624-771)||(13149975-13150122)
chr3 (615-765)||(3899929-3900079)
chr3 (624-806)||(39653253-39653434)
chr3 (621-768)||(14814075-14814222)
chr3 (624-771)||(32227097-32227244)
chr3 (624-771)||(32227623-32227770)
chr3 (612-806)||(25802412-25802605)
chr3 (610-769)||(37045160-37045316)
chr3 (610-770)||(25238546-25238706)
chr3 (610-806)||(4067222-4067417)
chr3 (624-771)||(16811048-16811195)
chr3 (612-770)||(20884981-20885139)
chr3 (609-766)||(7477319-7477476)
chr3 (612-689)||(25238991-25239068)
chr3 (630-765)||(53150694-53150829)
chr3 (610-771)||(39641060-39641208)
chr3 (695-805)||(41472390-41472499)
chr3 (624-689)||(41473746-41473811)
chr3 (557-597)||(16462863-16462903)
chr3 (630-770)||(25230587-25230727)
chr3 (630-770)||(25238174-25238314)
chr3 (831-883)||(28561768-28561820)
chr3 (832-884)||(39640958-39641010)
chr3 (831-874)||(7477222-7477265)
chr3 (831-874)||(7493912-7493955)
chr3 (612-770)||(25230112-25230270)
chr3 (612-770)||(25237699-25237857)
chr3 (609-766)||(7494009-7494166)
chr3 (617-770)||(30529811-30529963)
chr3 (831-884)||(32797007-32797060)
chr3 (710-771)||(41474120-41474181)
chr3 (624-712)||(18318837-18318925)
chr3 (831-883)||(39653186-39653238)
chr3 (610-681)||(25230959-25231030)
chr3 (624-770)||(25248235-25248382)
chr3 (831-866)||(29224363-29224398)
chr3 (707-766)||(29224452-29224511)
chr3 (831-874)||(31284348-31284391)
chr3 (696-766)||(15377412-15377482)
chr3 (696-766)||(15411083-15411153)
chr3 (610-652)||(15417158-15417200)
chr3 (742-771)||(2911218-2911247)
chr3 (612-689)||(2911289-2911366)
chr3 (834-883)||(14813971-14814020)
chr3 (617-766)||(15405674-15405823)
chr3 (831-884)||(30529708-30529761)
chr3 (831-876)||(32386806-32386851)
chr3 (831-884)||(41472322-41472374)
chr3 (556-597)||(42531185-42531226)
[»] scaffold0322 (2 HSPs)
scaffold0322 (624-771)||(19089-19236)
scaffold0322 (831-884)||(18987-19040)
[»] scaffold0022 (5 HSPs)
scaffold0022 (624-771)||(163010-163157)
scaffold0022 (624-771)||(162553-162701)
scaffold0022 (610-763)||(163202-163355)
scaffold0022 (624-771)||(69691-69838)
scaffold0022 (831-884)||(162750-162803)
[»] chr4 (64 HSPs)
chr4 (624-771)||(35871750-35871897)
chr4 (624-806)||(49998725-49998906)
chr4 (628-766)||(14571562-14571700)
chr4 (624-768)||(4127288-4127432)
chr4 (624-806)||(23350153-23350334)
chr4 (610-771)||(44470731-44470892)
chr4 (624-766)||(14572024-14572163)
chr4 (624-769)||(7678492-7678637)
chr4 (610-770)||(23943098-23943258)
chr4 (612-806)||(44471183-44471376)
chr4 (631-761)||(8467690-8467815)
chr4 (667-806)||(12691912-12692050)
chr4 (624-762)||(13266218-13266356)
chr4 (624-806)||(50398408-50398589)
chr4 (630-766)||(27578333-27578469)
chr4 (612-770)||(1645607-1645765)
chr4 (609-767)||(3169333-3169491)
chr4 (617-771)||(4185838-4185990)
chr4 (624-766)||(17628639-17628781)
chr4 (610-805)||(21067372-21067566)
chr4 (624-768)||(24629306-24629447)
chr4 (618-767)||(27578773-27578922)
chr4 (637-769)||(4127772-4127904)
chr4 (646-764)||(27578178-27578296)
chr4 (612-689)||(4414245-4414322)
chr4 (628-765)||(41870047-41870184)
chr4 (631-770)||(27026626-27026765)
chr4 (624-690)||(5810038-5810104)
chr4 (624-698)||(15268043-15268117)
chr4 (618-756)||(40607069-40607207)
chr4 (667-806)||(50814738-50814876)
chr4 (612-689)||(7381472-7381549)
chr4 (831-884)||(8467866-8467919)
chr4 (708-806)||(24628931-24629028)
chr4 (629-806)||(1464236-1464411)
chr4 (617-764)||(33764990-33765137)
chr4 (624-675)||(35477879-35477930)
chr4 (624-771)||(51331153-51331298)
chr4 (831-885)||(21067754-21067808)
chr4 (617-771)||(52048540-52048684)
chr4 (695-768)||(11828426-11828499)
chr4 (831-884)||(29628733-29628786)
chr4 (831-883)||(12692065-12692117)
chr4 (557-597)||(16871547-16871587)
chr4 (667-739)||(26200206-26200278)
chr4 (610-662)||(53854703-53854755)
chr4 (710-806)||(13613854-13613948)
chr4 (708-771)||(21220285-21220348)
chr4 (708-771)||(50398947-50399010)
chr4 (624-755)||(17506070-17506197)
chr4 (640-770)||(23942675-23942805)
chr4 (646-775)||(33294784-33294913)
chr4 (831-880)||(44471391-44471440)
chr4 (831-884)||(50399059-50399112)
chr4 (710-770)||(29628624-29628684)
chr4 (624-663)||(50399335-50399374)
chr4 (831-885)||(1645815-1645869)
chr4 (834-876)||(2499663-2499705)
chr4 (735-769)||(14351920-14351954)
chr4 (687-769)||(17028999-17029081)
chr4 (695-769)||(17029455-17029529)
chr4 (742-771)||(15306079-15306108)
chr4 (843-884)||(20930806-20930847)
chr4 (610-663)||(29628510-29628563)
[»] scaffold0168 (2 HSPs)
scaffold0168 (624-771)||(2865-3012)
scaffold0168 (831-884)||(2763-2816)
[»] scaffold0005 (2 HSPs)
scaffold0005 (628-766)||(245676-245814)
scaffold0005 (624-766)||(245213-245352)
[»] chr8 (57 HSPs)
chr8 (624-806)||(22026468-22026650)
chr8 (624-806)||(22548425-22548606)
chr8 (624-806)||(41658981-41659162)
chr8 (624-771)||(27022215-27022361)
chr8 (610-771)||(17103204-17103366)
chr8 (610-771)||(10844477-10844638)
chr8 (624-806)||(22548871-22549052)
chr8 (624-769)||(34308811-34308956)
chr8 (624-771)||(25148090-25148236)
chr8 (624-806)||(25147625-25147805)
chr8 (624-769)||(34308355-34308500)
chr8 (610-720)||(15818878-15818988)
chr8 (624-770)||(31283528-31283673)
chr8 (624-806)||(12827130-12827311)
chr8 (610-770)||(8080204-8080364)
chr8 (624-771)||(12100814-12100960)
chr8 (610-806)||(27925988-27926182)
chr8 (612-770)||(2044182-2044340)
chr8 (617-770)||(33852127-33852280)
chr8 (612-770)||(3745225-3745383)
chr8 (610-764)||(15567871-15568025)
chr8 (640-770)||(32292521-32292651)
chr8 (624-776)||(27819124-27819274)
chr8 (614-690)||(28912720-28912796)
chr8 (624-720)||(32292115-32292211)
chr8 (624-771)||(21315986-21316132)
chr8 (709-771)||(25144895-25144957)
chr8 (831-884)||(17103102-17103155)
chr8 (610-710)||(6466440-6466540)
chr8 (624-763)||(25307895-25308034)
chr8 (624-720)||(9251058-9251155)
chr8 (831-884)||(28375126-28375179)
chr8 (617-770)||(30527351-30527504)
chr8 (831-884)||(33852330-33852383)
chr8 (831-883)||(22549067-22549119)
chr8 (831-874)||(41659177-41659220)
chr8 (831-881)||(1297031-1297081)
chr8 (636-770)||(3744762-3744896)
chr8 (609-689)||(6463404-6463485)
chr8 (609-770)||(10729747-10729908)
chr8 (831-884)||(25147557-25147610)
chr8 (831-884)||(29971473-29971526)
chr8 (831-883)||(10844905-10844957)
chr8 (623-675)||(22840424-22840476)
chr8 (831-883)||(27925921-27925973)
chr8 (831-874)||(3744669-3744712)
chr8 (832-883)||(10844688-10844739)
chr8 (742-806)||(10844972-10845035)
chr8 (667-769)||(10729605-10729707)
chr8 (846-884)||(12100712-12100750)
chr8 (834-884)||(30334983-30335033)
chr8 (624-770)||(41913094-41913240)
chr8 (831-884)||(2044079-2044132)
chr8 (831-880)||(22026404-22026453)
chr8 (831-884)||(27021951-27022004)
chr8 (831-884)||(34308551-34308604)
chr8 (831-884)||(34309011-34309064)
[»] scaffold0499 (1 HSPs)
scaffold0499 (624-883)||(1927-2175)
[»] scaffold0389 (1 HSPs)
scaffold0389 (624-806)||(13409-13590)
[»] chr2 (43 HSPs)
chr2 (624-806)||(30966779-30966960)
chr2 (624-806)||(25337873-25338054)
chr2 (624-771)||(30966357-30966504)
chr2 (624-762)||(32377783-32377921)
chr2 (624-806)||(33771090-33771271)
chr2 (624-771)||(24818449-24818595)
chr2 (624-771)||(32377592-32377739)
chr2 (624-766)||(30961759-30961901)
chr2 (610-767)||(15639861-15640018)
chr2 (617-770)||(16379061-16379214)
chr2 (617-770)||(16379517-16379670)
chr2 (610-770)||(1912648-1912808)
chr2 (646-806)||(8256615-8256774)
chr2 (624-765)||(30963139-30963280)
chr2 (610-767)||(15620025-15620186)
chr2 (626-766)||(30963598-30963738)
chr2 (667-806)||(41754378-41754516)
chr2 (624-806)||(5399693-5399874)
chr2 (708-806)||(11388276-11388373)
chr2 (617-770)||(25433925-25434078)
chr2 (624-764)||(13191104-13191244)
chr2 (632-805)||(29259504-29259676)
chr2 (624-771)||(83140-83287)
chr2 (708-769)||(11394658-11394719)
chr2 (624-806)||(33175047-33175226)
chr2 (831-880)||(41754314-41754363)
chr2 (557-597)||(8986823-8986863)
chr2 (610-765)||(1707170-1707325)
chr2 (831-874)||(1953186-1953229)
chr2 (624-770)||(8074016-8074162)
chr2 (624-686)||(20502172-20502234)
chr2 (831-884)||(1707062-1707115)
chr2 (835-884)||(16379414-16379463)
chr2 (831-884)||(18447990-18448043)
chr2 (716-806)||(29804771-29804860)
chr2 (831-884)||(30966255-30966308)
chr2 (831-883)||(25338069-25338121)
chr2 (557-597)||(32291050-32291090)
chr2 (557-597)||(38583665-38583705)
chr2 (831-884)||(24818347-24818400)
chr2 (831-884)||(25434128-25434181)
chr2 (831-884)||(27882998-27883051)
chr2 (831-884)||(33174979-33175032)
[»] scaffold0243 (2 HSPs)
scaffold0243 (624-771)||(1343-1490)
scaffold0243 (831-883)||(1242-1294)
[»] scaffold0217 (1 HSPs)
scaffold0217 (624-771)||(433-580)
[»] scaffold0020 (2 HSPs)
scaffold0020 (627-771)||(107342-107486)
scaffold0020 (831-881)||(107535-107585)
[»] scaffold0047 (3 HSPs)
scaffold0047 (610-765)||(17460-17615)
scaffold0047 (610-769)||(17997-18156)
scaffold0047 (831-884)||(18206-18259)
[»] scaffold0018 (2 HSPs)
scaffold0018 (624-771)||(10423-10569)
scaffold0018 (831-884)||(10321-10374)
[»] scaffold0002 (2 HSPs)
scaffold0002 (624-771)||(154880-155027)
scaffold0002 (624-681)||(154515-154572)
[»] scaffold0137 (1 HSPs)
scaffold0137 (610-766)||(7070-7225)
[»] scaffold0277 (1 HSPs)
scaffold0277 (632-771)||(14586-14725)
[»] scaffold0040 (2 HSPs)
scaffold0040 (624-769)||(2086-2231)
scaffold0040 (831-884)||(2282-2335)
[»] scaffold0024 (1 HSPs)
scaffold0024 (624-771)||(105843-105990)
[»] scaffold1519 (1 HSPs)
scaffold1519 (629-753)||(1582-1706)
[»] scaffold0333 (3 HSPs)
scaffold0333 (610-771)||(5144-5304)
scaffold0333 (617-806)||(4650-4837)
scaffold0333 (609-663)||(5354-5408)
[»] scaffold0036 (1 HSPs)
scaffold0036 (624-725)||(26237-26338)
[»] scaffold0088 (1 HSPs)
scaffold0088 (831-880)||(23698-23747)
[»] scaffold0065 (1 HSPs)
scaffold0065 (624-663)||(62983-63022)
[»] scaffold1126 (1 HSPs)
scaffold1126 (834-880)||(991-1037)
[»] scaffold0071 (1 HSPs)
scaffold0071 (610-652)||(45038-45080)
[»] scaffold0557 (1 HSPs)
scaffold0557 (624-689)||(2301-2366)


Alignment Details
Target: chr6 (Bit Score: 597; Significance: 0; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 597; E-Value: 0
Query Start/End: Original strand, 8 - 806
Target Start/End: Complemental strand, 12195221 - 12194417
Alignment:
Q  8 tgtagttcacaaccctttgaaactagctcactaggatcactttgctcattccgcgaatcaactacaaattaaaatcttagtttcttattcaacaccaaga 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12195221 tgtagttcacaaccctttgaaactagctcactaggatcactttgctcattccgcgaatcaactacaatttaaaatcttagtttcttattcaacaccaaga 12195122  T
Q  108 cctataaaagtgagaggaaatagatcatagcagcttatatgacataagcaaa-tataaatactatgtatttttaatccccaaatttgaccatattttact 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  12195121 cctataaaagtgagaggaaatagatcatagcagcttatatgacataagcaaaatataaatactatgtatttttaatccccaaatttgaccatattttact 12195022  T
Q  207 caacttgaatcaaaccaagactttcatataaatgtccatctatcttaagacaacggacatatataatttaagtaaaagtgaaggatcagggttttatgat 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  12195021 caacttgaatcaaaccaagactttcatataaatgtccatctatcttaagacaacggacatatataatttgagtaaaagtgaaggatcaggattttatgat 12194922  T
Q  307 ttcaaaaagaataaaaatttgctactcatcaaaataaactgaattatgtctctagattgaaaactcagtgtatttttattagttgtaggaacttaacaaa 406  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  12194921 ttcaaaaagaataaaaatttgctactcatcaaaataaactgaattatgtctctagattgaaaattcagtgtatttttattagttgtagtaacttaacaaa 12194822  T
Q  407 gtgaactagaaactgttcaagataacaggaaaattttcaaatttgagttagatgagc-aaaaaactaacattgacataaataaagactgaaagcttataa 505  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||||||||||| ||||||    
T  12194821 gtgaactagaaactgttcaagataacaggaaaattttcaaatttgagttagatgaccaaaaaaactaacattgacagaaataaagactgaaagtttataa 12194722  T
Q  506 aatttcacacaatatagagcgagcgttaacttca--atcattccatctttcatttgaggggcagtgttagaactttatattatttagtatgtttcttata 603  Q
    |||||||| |||||||| |||||  || ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12194721 aatttcactcaatatagcgcgagttttcacttcaatatcattccatctttcatttgaggggcagtgttagaactttatattatttattatgtttcttata 12194622  T
Q  604 atacttagacgattttaagtattg----ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaac 699  Q
    ||| | || |||||||||||||||    ||||||||||||| ||| ||||| |||||||||||||| |||||||||| ||||||||| |||  |  ||||    
T  12194621 atattgaggcgattttaagtattgctgaccgactgacccca-aaaccaacatgagtcttttcagtgtgttttgtccaaactcacacgttttctggaaaac 12194523  T
Q  700 tttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgtt 799  Q
    |||| ||||||||| |||||||||||||| |||| |||||| | ||||||||||||||||||||||||||||| |||       ||||||||||||||||    
T  12194522 tttctaaaaggtcatccatcctaaaattgctccatgtcaaacatgcttaactgtggagttcttatggaatgaattat-aaaaaagaagatgcatcttgtt 12194424  T
Q  800 gatatag 806  Q
    |||||||    
T  12194423 gatatag 12194417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 17027407 - 17027554
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  17027407 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 17027506  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  17027507 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 17027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 20850591 - 20850410
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20850591 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20850492  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||| ||||||||||||||||| |||        |||||||||||||||||||||||    
T  20850491 aattgctccaagtcaagcacgcttaactgtagagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20850410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 9352332 - 9352185
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  |||||||||| |    ||||||||||||| ||    
T  9352332 attgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgagaaacttccaggtaggtcacccatcccaa 9352233  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  9352232 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 9352185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 617 - 767
Target Start/End: Original strand, 31415958 - 31416107
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||| | ||||||||| |||||||||| |||||||||||||||||| ||| ||  ||    
T  31415958 tttaagtattgccgactgatcccacaaaccaacacga-tcttttcagcgtgttttgtcctcactcacacgtttttcgagaaactttccataagatcgtcc 31416056  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    |||| |||| |  || | |||||| |||||||| |||||||||||||||||    
T  31416057 atcccaaaactaatctaagtcaaacacgcttaattgtggagttcttatgga 31416107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 13191389 - 13191570
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||||||||||  |||||||| ||||| ||||||| ||| ||||||| ||    |||||||||||  ||    
T  13191389 attgccgactgaccccacaaaccaacacgagtcttttcagtgtattttgtcctcactcgcacgcttatcgggaaacttcccggttggtcacccatctcaa 13191488  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||| || |||        |||||||||||||||||||||||    
T  13191489 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaacgagcta-ccgaaaagaagatgcatcttgttgatatag 13191570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 23986193 - 23986335
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||| ||||||||||| | || || ||| ||||| |||||||| || ||||||| ||| |||||||||||||| ||    
T  23986193 attgccgactgaccccacaaaccaacacaagtcttttcagcgtgtcttctcctcactcgcacgctttccgtgaaacttcccagaaggtcacccatcccaa 23986292  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| |||||  || |||||||||| |||||||||||    
T  23986293 aattgctccaagtcaagcacacttaactgtgaagttcttatgg 23986335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 624 - 769
Target Start/End: Complemental strand, 13492603 - 13492457
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgt-ccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| | || ||||| |||||||   | ||||||| ||   ||||||||||||| |    
T  13492603 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttttcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccca 13492504  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||    
T  13492503 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaat 13492457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 13493060 - 13492878
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||| ||||||||| ||||||||||||||||||||||||   ||||| |||| ||||| |||||||  || | ||||||||   ||||||||||||| |    
T  13493060 attgctgactgaccctacaaatcaacacgagtcttttcagcatgtttttgtcctcactcgcacgcttaccgggtaactttccggtaggtcacccatccca 13492961  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||| || | |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13492960 aaattgctctaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13492878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 7912148 - 7911967
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||| ||||||||||| | ||||||||| ||||| || ||||  |||||| ||| ||   ||||||||||||| ||    
T  7912148 attgtcgactgaccccacaaaccaacacaagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaatcttcccggtaggtcacccatcccaa 7912049  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  | || ||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  7912048 aattgctccaagtcaagcaagcataactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 7911967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 7912580 - 7912433
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||| |||||||||| ||||| |||||||||||| | ||||||||| |||||  ||||||  || ||||||| |||  ||||||||||| | ||    
T  7912580 attgccgactaaccccacaaaccaacatgagtcttttcagcgtgttttgtcctcactcgtacgcttaacgggaaacttcccagcaggtcacccattccaa 7912481  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||| |||||| |||||||||||||||||||    
T  7912480 aattgctccaagtcaagcacgtttaactatggagttcttatggaatga 7912433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 624 - 770
Target Start/End: Original strand, 2890715 - 2890861
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||| ||||| ||||||||||||||| || | ||||||||| ||||| ||||||| ||| |||||||  ||  |||||||||||||||     
T  2890715 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttatcgggaaacttctcagtaggtcacccatcctag 2890814  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     | | || || |||||  |||||||||||||||||||||||||||||    
T  2890815 tactatttcaagtcaagcacgcttaactgtggagttcttatggaatg 2890861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20896563 - 20896745
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgag-ttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||| ||||||||||||| |||||||||||||||||||| | |||| ||| ||||| ||| |||  || |||| || ||   ||||||||||||| |    
T  20896563 attgccggctgaccccacaaaccaacacgagtcttttcagtgtgtttttctcctcactcgcacacttaccgggaaatttcccggtaggtcacccatccca 20896662  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||| |||| | |||  ||||||||| |||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20896663 aaattgctccaagccaagcacgcttaaccgtggagttcttatggaatgagcta-ctgaaaagaagatgcatcttgttgatatag 20896745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 618 - 771
Target Start/End: Original strand, 2720433 - 2720586
Alignment:
Q  618 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 717  Q
    ||||| |||||||||||||||  |||| | ||||||||||| |||| | ||||||| | ||||| ||||||| ||| ||||||| |||| | ||||||||    
T  2720433 ttaagcattgccgactgaccctgcaaaccgacacgagtcttctcagcgtgttttgttctcactcgcacgcttatcgggaaacttcccaatatgtcaccca 2720532  T
Q  718 tcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||| || | |  |||| |||||  || |||||||||||||||||||||||||||    
T  2720533 tccaaagactactccaagtcaagcacacttaactgtggagttcttatggaatga 2720586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 624 - 767
Target Start/End: Original strand, 9440185 - 9440328
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||||| ||||||||||||||||||| |||| |||   |||||||  || ||||||| ||||  |||||||| ||| |||||||||||||| ||    
T  9440185 attgtcgactgatcccacaaatcaacacgagtttttttagtatattttgtcatcattcacacgtttttttagaaacttcccataaggtcacccatccaaa 9440284  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    ||||| ||||  ||||  || |||||||||| ||||||||||||    
T  9440285 aattgctccaaatcaagcacacttaactgtgaagttcttatgga 9440328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 9440733 - 9440875
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| || ||||||| ||||||| |  |||||||  ||||  |||  |||||| ||||||| | | |||||||||||||| ||    
T  9440733 attgccgactgaccccacaaaccagcacgagttttttcagcgtattttgtcatcacttgcacatttttcgggaaacttccaagaaggtcacccatcccaa 9440832  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| || | |||||| || |||||||||| |||||||||||    
T  9440833 aattgctcaaagtcaaacacacttaactgtgaagttcttatgg 9440875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 624 - 770
Target Start/End: Complemental strand, 11062555 - 11062409
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||| | | |||||||||| | | ||||||| | ||||||||| |||||||  | || ||| |||||||||| | ||||||||||||| ||    
T  11062555 attgccgactgactctataaatcaacacaaattttttcagcgtgttttgtcctcactcacgggtttatcgggaaactttccgataggtcacccatccaaa 11062456  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     | |  |||| |||||  |||||||||||||||||||||||||||||    
T  11062455 gactactccaagtcaagcacgcttaactgtggagttcttatggaatg 11062409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 624 - 775
Target Start/End: Complemental strand, 28583234 - 28583082
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||||||||  |||| |||||||||||||  ||||||||| ||||||||||||||  | ||||||||||| || || || ||| | ||    
T  28583234 attgccgactgaccccacaaactaacatgagtcttttcagtatgttttgtccccactcacacgctttctgggaaactttccagaaagtaactcatacaaa 28583135  T
Q  724 -aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaacta 775  Q
     | |  ||||| |||||  || |||| ||||||| ||||||||||||||||||    
T  28583134 gactaattccatgtcaaggacacttagctgtggatttcttatggaatgaacta 28583082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 624 - 763
Target Start/End: Original strand, 17730985 - 17731124
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||| ||||| ||||||||||||||| || | ||||||||| ||||  |||||||  ||| |||||||||   |||||||| |||  ||    
T  17730985 attgtcgactgaccctacaaaccaacacgagtctttttagcgtgttttgtcctcacttgcacgcttaccgataaactttccggtaggtcacctatctcaa 17731084  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttctta 763  Q
    ||||| |||| |||||  |||||||| |||||||||||||    
T  17731085 aattgctccaagtcaagcacgcttaaatgtggagttctta 17731124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 632 - 771
Target Start/End: Complemental strand, 28780372 - 28780233
Alignment:
Q  632 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 731  Q
    ||||||||||||| |||||||||||||||||    ||||| ||| ||||| ||| |||  |   |||||| ||   ||||||||||||| ||||||| ||    
T  28780372 ctgaccccacaaaccaacacgagtcttttcaaaatgttttatcctcactcgcacacttaccagaaaacttcccggtaggtcacccatcccaaaattgctc 28780273  T
Q  732 cacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || |||||  ||||||||||||||||||||||||||||||    
T  28780272 caagtcaagcacgcttaactgtggagttcttatggaatga 28780233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 23776710 - 23776530
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcga-gaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||| ||||||| |||||||| ||||||||| | ||||||||  ||||| |||| ||| | | ||||||| |||  |||||| |||||| |    
T  23776710 attgccgactgactccacaaaccaacacgaatcttttcagcgtgttttgtcgtcactcgcacg-tttactaggaaacttcccagtaggtcatccatccca 23776612  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||| |||| ||||| ||||||||| |||| |||||||||| ||||| |||        |||||||||||||||||||||||    
T  23776611 aaattgctccaagtcaagtacgcttaa-tgtgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 23776530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 672 - 771
Target Start/End: Complemental strand, 15929804 - 15929705
Alignment:
Q  672 gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||| |||||||| |||||  | |||||||   |||||||||||||||| ||||||| | || || ||| ||||||||||||||||||||||||||||||    
T  15929804 gtcctcactcacatgctttatgggaaacttcataaaaggtcacccatcccaaaattgcttcatgttaaacacgcttaactgtggagttcttatggaatga 15929705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 610 - 689
Target Start/End: Original strand, 20126044 - 20126123
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||||| |||||| |||| |||| ||||| ||||| |||||||||||||||||||| ||||||||| ||||| |||||||    
T  20126044 agacgactttaagcattgtcgacggaccctacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgctt 20126123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 617 - 771
Target Start/End: Complemental strand, 1991830 - 1991676
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    ||||| |||||  |||||| ||||||||||||||||||| ||||||| |   ||||||  |||||||| ||||||||  ||||||| || ||||||||||    
T  1991830 tttaaatattgttgactgatcccacaaatcaacacgagttttttcagcgtactttgtcttcactcacatgcttttcggaaaacttttcagaaggtcaccc 1991731  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||| |||| |  ||||  ||||  | | ||||||||| |||||||||| |||||    
T  1991730 atccaaaaactactccaaatcaataatgtttaactgtgaagttcttatgaaatga 1991676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 2681096 - 2681239
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||| |||  | ||||||||| ||||  |||||||     ||||||| |||    || |||||||| ||    
T  2681096 attgccgactgaccccacaaaccaacacgagtcttctcaacgtgttttgtcctcacttgcacgcttactaggaaacttccca----gtaacccatcccaa 2681191  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||  | ||  |||||||| |||||||||||||||||||||    
T  2681192 aattgttccaaattaagcacgcttaattgtggagttcttatggaatga 2681239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 2891158 - 2891235
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| ||||||||||||||| ||||| |||||||| ||||||||| | ||||||||| ||||| |||||||    
T  2891158 acgactttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtcctcactcgcacgctt 2891235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 690
Target Start/End: Complemental strand, 15929416 - 15929343
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 690  Q
    |||||| |||||||| ||||||||||||||||||| |||||||| || |  |||||||| ||||||||||||||    
T  15929416 tttaaggattgccgagtgaccccacaaatcaacacaagtctttttagcgtattttgtcctcactcacacgcttt 15929343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 708 - 806
Target Start/End: Complemental strand, 16520154 - 16520057
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||  ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  16520154 aggtcacccatctcaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 16520057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 681
Target Start/End: Complemental strand, 27334363 - 27334306
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  27334363 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 27334306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 681
Target Start/End: Complemental strand, 27395103 - 27395046
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  27395103 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 27395046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 831 - 874
Target Start/End: Original strand, 2720636 - 2720679
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  2720636 ttcttataagtcttccttcaaccatgcagtctcatacctgcacg 2720679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 557 - 600
Target Start/End: Complemental strand, 28063214 - 28063171
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgtttctt 600  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  28063214 ttgaggggaagtgttagaactttatattatttagtatgtttctt 28063171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 624 - 770
Target Start/End: Complemental strand, 17205608 - 17205462
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||| | ||| ||||||||| ||||||||||| ||| ||||||| | ||||| || | ||| ||| ||||||||  ||||||| ||||||| ||    
T  17205608 attgccgactaatcccgcaaatcaacgcgagtcttttcggtgtgttttgttctcactcgcatgttttccgaaaaactttcataaaggtctcccatcccaa 17205509  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||  ||||  ||||  | | |||||  ||||||||||||||||||    
T  17205508 aattactccaaatcaagcatgtttaacaatggagttcttatggaatg 17205462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 675
Target Start/End: Complemental strand, 3653182 - 3653117
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    ||||||||||||| |||||||| |||||| ||||| ||| |||||||||||||| | |||||||||    
T  3653182 agacgattttaagcattgccgattgaccctacaaaccaatacgagtcttttcagcgtgttttgtcc 3653117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 6330984 - 6331037
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  6330984 ttcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggat 6331037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 875
Target Start/End: Original strand, 14771791 - 14771835
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacgg 875  Q
    |||||||||||||| |||||||||||||||||||||||| |||||    
T  14771791 ttcttataagtcttccttcaaccatgcagtctcatacctacacgg 14771835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 21862461 - 21862501
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21862461 ttgaggggaagtgttagaactttatattatttagtatgttt 21862501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Complemental strand, 33424195 - 33424155
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  33424195 ttgaggggtagtgttagaactttatattatttagtatgttt 33424155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 834 - 885
Target Start/End: Complemental strand, 12194400 - 12194350
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 885  Q
    |||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  12194400 ttataagtctttcttcaatcatgcagt-tcatatctgcacggtctcaggatt 12194350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 834 - 884
Target Start/End: Complemental strand, 13492860 - 13492810
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||| ||| |||||||||||||||||||||||||||| | ||||||||    
T  13492860 ttataagccttccttcaaccatgcagtctcatacctgcacagcctcaggat 13492810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 831 - 873
Target Start/End: Complemental strand, 21312045 - 21312003
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcac 873  Q
    |||||||||| ||| ||||||||||||||||||||||||||||    
T  21312045 ttcttataagccttccttcaaccatgcagtctcatacctgcac 21312003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 831 - 885
Target Start/End: Complemental strand, 32292959 - 32292905
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 885  Q
    |||||||||| |||  |||||||||||||||||||||||||||| ||| ||||||    
T  32292959 ttcttataagccttcattcaaccatgcagtctcatacctgcacgatctaaggatt 32292905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 17027603 - 17027656
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  17027603 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggat 17027656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 17731185 - 17731238
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||| |||||||||||| |||||||| |||| ||||||||    
T  17731185 ttcttataagtcttcctttaaccatgcagtcccatacctgaacggcctcaggat 17731238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 20850395 - 20850346
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  20850395 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 20850346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 618 - 770
Target Start/End: Complemental strand, 17851194 - 17851042
Alignment:
Q  618 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 717  Q
    |||||||||||||| |||||| ||||| ||||||||||||||||     |||||||||  |||| ||||| |     ||||||| |||  ||||| ||||    
T  17851194 ttaagtattgccgattgaccctacaaaccaacacgagtcttttcgacttgttttgtcctaactcgcacgcgtactaggaaacttcccagtaggtctccca 17851095  T
Q  718 tcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||| || | |  |||| |||||  ||||||||||||||||||||||| |||||    
T  17851094 tccgaagactactccaagtcaagcacgcttaactgtggagttcttatagaatg 17851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 617 - 769
Target Start/End: Original strand, 28065705 - 28065856
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    ||||||||||| ||| |||||||  ||  ||||| |||  |||| || | ||||||||  || |||||||||||||| |||||||  | |||||| ||||    
T  28065705 tttaagtattgtcgattgaccccgtaatccaacatgagattttttagcgtgttttgtcatcattcacacgcttttcg-gaaacttctcgaaaggttaccc 28065803  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    |||  |||| || || | |||||| | |||||| |||||||||||||||||||    
T  28065804 atcacaaaactgctcaaagtcaaacatgcttaattgtggagttcttatggaat 28065856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 746 - 806
Target Start/End: Complemental strand, 3652634 - 3652575
Alignment:
Q  746 ttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  3652634 ttaactgtggagttcttatggaatgaacta-ccaaaaagaagatgcatcttgttgatatag 3652575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 612 - 686
Target Start/End: Complemental strand, 26380994 - 26380920
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacg 686  Q
    |||| ||||||||||| | ||||||| || ||| |||| |||||||||| |||| |||||||||  |||||||||    
T  26380994 acgactttaagtattgtcaactgaccacataaaccaactcgagtctttttagtgtgttttgtcctaactcacacg 26380920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 2890911 - 2890964
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||  ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  2890911 ttcttataaaccttccttcaaccatgcagtcccatacctgcacggcctcgggat 2890964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 20896760 - 20896813
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| || |||||    
T  20896760 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctaaggat 20896813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 23776515 - 23776462
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||| ||||||| || || ||||||||    
T  23776515 ttcttataagtcttccttcaaccatgtagtcccatacctacaaggcctcaggat 23776462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 735 - 776
Target Start/End: Original strand, 33774989 - 33775030
Alignment:
Q  735 gtcaaatacgcttaactgtggagttcttatggaatgaactat 776  Q
    |||||| || |||||||||||||||||||||||||| |||||    
T  33774989 gtcaaacacacttaactgtggagttcttatggaatggactat 33775030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 90; Significance: 5e-43; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 28496124 - 28495943
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| |||| ||||||||||||| ||    
T  28496124 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaataggtcacccatcccaa 28496025  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28496024 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 28495943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 7646699 - 7646538
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| || |||| ||||| |||||||||| |||||||||||||||||||| ||||||||| ||||| ||||||| |||  |||||||||   ||    
T  7646699 agacgacttttaggattgtcgactaaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcacgcttatcggaaaactttccggtag 7646600  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  7646599 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 7646538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 2193526 - 2193345
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  2193526 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 2193427  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| ||||  ||||  ||||||||||||||||||| |||| ||||| |||        |||||||||||||||||||||||    
T  2193426 aattgctccaaatcaagcacgcttaactgtggagttcctatgaaatgagcta-ccgaatagaagatgcatcttgttgatatag 2193345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 2189414 - 2189233
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||| ||||||||||||||||||||||| |||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||| ||||| ||    
T  2189414 attgccgactgtccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcactcatcccaa 2189315  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  2189314 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctat-cgaaaagaagatgcatcttgttgatatag 2189233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 34405467 - 34405614
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||||||||||| |||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  34405467 attgtcgactgaccccacaaatcaacacgggtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 34405566  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  34405567 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 34405614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 42515814 - 42515633
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca-aaaggtcacccatccta 722  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |||| ||||||   ||||||||||||| |    
T  42515814 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg-gaaaatttccatgtaggtcacccatccca 42515716  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  42515715 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 42515633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 2941633 - 2941814
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||| |||||| |||||||||||||||||| | ||||| ||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  2941633 attgccgactgaccgcacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 2941732  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2941733 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2941814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 7646354 - 7646501
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  |||||||||| ||   ||||||||||||| ||    
T  7646354 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaacttcccggtaggtcacccatcccaa 7646453  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||||||    
T  7646454 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatga 7646501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 9125229 - 9125048
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  9125229 attgccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 9125130  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||  |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  9125129 aattgctccgagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 9125048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 765
Target Start/End: Complemental strand, 18833556 - 18833415
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||| | ||||||||||||||||||||||||||| | ||||||||| ||||| |||| ||  || ||||||| ||   ||||||||||||| ||    
T  18833556 attgccgacttatcccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcacccatcccaa 18833457  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    ||||| || | |||||| ||||||||||||||||||||||||    
T  18833456 aattgctcaaagtcaaacacgcttaactgtggagttcttatg 18833415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 13122380 - 13122528
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    |||||||| |||||||||||| |||||||||||||||||| | ||||| |||| ||||| |||||||  || ||||||| ||   ||||||||||||| |    
T  13122380 attgccgattgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccca 13122479  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||| ||||  ||||  ||||||||||||||||||||||||||||||    
T  13122480 aaattgctccaaatcaagcacgcttaactgtggagttcttatggaatga 13122528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 13125011 - 13125159
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||||||||||| ||||||||||| |||||| | ||||| |||| ||||| |||||||   | ||||||| ||   ||||||||||||| |    
T  13125011 attgccgactgaccccacaaaccaacacgagtcctttcagcgtgtttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccca 13125110  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  13125111 aaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 13125159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 36422521 - 36422341
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   |||||||||||||  |    
T  36422521 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcc-ca 36422423  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  36422422 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 36422341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 610 - 806
Target Start/End: Original strand, 6718937 - 6719131
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| || ||||| ||||||||||||||| |||||||| ||||||||||| ||||||||| ||||| |||||||  || |||| || || | |     
T  6718937 agacgacttttaggattgctgactgaccccacaaaccaacacgattcttttcagtgtgttttgtcctcactcgcacgcttaccgggaaagttcccgatat 6719036  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||||||||  |||||  |||| |||||  |||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  6719037 gtcacccatcc-caaattactccaagtcaagcacgcttaactctggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 6719131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 611 - 771
Target Start/End: Original strand, 22529098 - 22529258
Alignment:
Q  611 gacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaagg 710  Q
    ||||| |||||| |||| |||||||||| ||||| ||||| |||||||||||| |  |||||||| |||||||||||||  ||||||||||  ||  |||    
T  22529098 gacgactttaagcattgtcgactgaccctacaaaccaacatgagtcttttcagcgtattttgtcctcactcacacgcttaccgagaaacttctcagtagg 22529197  T
Q  711 tcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||||||| || | |  |||| |||||| ||||||||||||| ||||||| || |||||    
T  22529198 tcacccatccaaagactactccaagtcaaacacgcttaactgtgaagttcttttgtaatga 22529258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 610 - 770
Target Start/End: Original strand, 29038882 - 29039042
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  || ||||||| ||   ||    
T  29038882 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcagtcacacgcttaccgggaaacttaccggtag 29038981  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| |||||| || | |  |||| |||||  |||||||| ||| ||||||||||||||||    
T  29038982 gtcatccatccaaagactactccaagtcaagcacgcttaaatgtagagttcttatggaatg 29039042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 28495495 - 28495665
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||||||           || ||   ||||||||||||| ||    
T  28495495 attgccgactgaccccacaaaccaacacgagtcttttcagcgggttttgtcctcactcgcacgct-----------ttcccggtaggtcacccatcccaa 28495583  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28495584 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-cctaaaagaagatgcatcttgttgatatag 28495665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 610 - 771
Target Start/End: Original strand, 37671625 - 37671784
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||||||||||||  ||||||||| |||| ||||||||| ||||| |||| |||| |||| ||||||||||||||  |||||||||| ||||||    
T  37671625 agacgactttaagtattgca-actgacccc-caaaccaacacgagactttttagtgtgtttggtcctcactcacacgctttatgagaaacttttcaaaag 37671722  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || |||||||  ||||||| ||||  ||||  |||||||| |||||| ||| |||| |||||    
T  37671723 gtgacccatcacaaaattgctccaattcaagcacgcttaaatgtggatttcatatgaaatga 37671784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 42515376 - 42515215
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| ||| | |||||||  ||| ||| || |    |     
T  42515376 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcacccgcacgcttaccgaaaaagttcctggtat 42515277  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||||    
T  42515276 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatga 42515215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 617 - 766
Target Start/End: Original strand, 5406456 - 5406606
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctttt-cgagaaactttccaaaaggtcacc 715  Q
    |||||| |||||| | || || |||| | |||||||||| ||||||||| ||||||||| ||||| |||| |||| ||  |||||||||| || |||| |    
T  5406456 tttaaggattgccaattgtcctcacagaccaacacgagtgttttcagtgtgttttgtcctcactcgcacgttttttcggaaaactttccagaaagtcatc 5406555  T
Q  716 catcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| ||||||| || | |||||  |||||||||||||||||||||||||    
T  5406556 catcccaaaattgctcaaagtcaagcacgcttaactgtggagttcttatgg 5406606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 2466207 - 2466047
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| |||||||||  |||||  ||||||||||||||||| | ||||||||| ||||  || ||||  || |||| || ||   ||    
T  2466207 agacgactttaagcattgtcgactgacct-acaaactaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaatttcccggtag 2466109  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||||||||  |||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  2466108 gtcacccatcccgaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 2466047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 636 - 771
Target Start/End: Original strand, 43776178 - 43776313
Alignment:
Q  636 ccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacg 735  Q
    ||||||||| |||||||||||||||||| | ||||||||  || || |||||||   |  |||||| ||   ||||||||||| | ||||||| |||| |    
T  43776178 ccccacaaaccaacacgagtcttttcagcgtgttttgtcttcattcgcacgcttactggaaaacttccccgcaggtcacccattccaaaattgctccaag 43776277  T
Q  736 tcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||  ||||||||||||||||||||||||||||||    
T  43776278 tcaagcacgcttaactgtggagttcttatggaatga 43776313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 708 - 806
Target Start/End: Complemental strand, 2465919 - 2465822
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2465919 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2465822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 610 - 771
Target Start/End: Original strand, 3305210 - 3305371
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||||||||| |||||| || |||||||||||||||||||||||| | ||||||| | ||||| ||| |||  |  ||||||||||   ||    
T  3305210 agacgactttaagtattgctgactgatcctacaaatcaacacgagtcttttcagcgtgttttgttctcactcgcactcttaccaggaaactttccggtag 3305309  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||| || | |  ||||  ||||  ||||||||||||| |||| ||||| |||||    
T  3305310 gtcacccatccaaagactactccaaatcaagcacgcttaactgtgaagtttttatgtaatga 3305371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 624 - 681
Target Start/End: Complemental strand, 36422652 - 36422595
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||| ||||||||||||||||||||||||||||||||||||| ||||||||| |||||    
T  36422652 attgtcgactgaccccacaaatcaacacgagtcttttcagtgtgttttgtcctcactc 36422595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 624 - 689
Target Start/End: Complemental strand, 43233227 - 43233162
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  43233227 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctt 43233162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 624 - 720
Target Start/End: Original strand, 26419111 - 26419207
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 720  Q
    |||| |||||||||||||||| |||||||||||||||||    ||||||||| |||||||| | ||||||||||| ||  || ||||||||||||||    
T  26419111 attgtcgactgaccccacaaaccaacacgagtcttttcaacatgttttgtcctcactcacatgattttcgagaaaattctcagaaggtcacccatcc 26419207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 610 - 681
Target Start/End: Original strand, 6747938 - 6748009
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| |||||    
T  6747938 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 6748009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 609 - 805
Target Start/End: Original strand, 35473982 - 35474177
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| |||||  ||||||  || |||| ||||| |||||| |||| |||||| | ||||||||| ||||| ||| |||  ||||||| || ||   |    
T  35473982 tagacgactttaaacattgccctctaaccctacaaaccaacacaagtcatttcagcgtgttttgtcctcactcgcacacttaccgagaaaattcccggta 35474081  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 805  Q
     ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||||||||| |||        ||||||||||||||||||||||    
T  35474082 cgtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccaaaaagaagatgcatcttgttgatata 35474177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 2611523 - 2611600
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||    
T  2611523 acgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagagtgttttgtcctcactcgcacgctt 2611600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 25182435 - 25182382
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| |||||||||||||||||||||| ||||| ||||||||||    
T  25182435 ttcttataagtcttccttcaaccatgcagtctcatacttgcacagtctcaggat 25182382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 42515166 - 42515113
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  42515166 ttcttataagtcttccttcaatcatgcagtctcatacctgcacggcctcaggat 42515113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 2193330 - 2193278
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| |||||||||||||||||||||    
T  2193330 ttcttataagccttccttcaaccatgcagtcccatacctgcacggtctcagga 2193278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 771
Target Start/End: Complemental strand, 25182622 - 25182484
Alignment:
Q  633 tgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttcc 732  Q
    |||||||||||  ||| |||||| |||| || | |||||| || |||||  |||||||| ||||||||| ||| ||||||  |||||| || | |  |||    
T  25182622 tgaccccacaacccaatacgagtttttttagcgtgttttgccctcactcgaacgctttttgagaaacttcccagaaggtcctccatccaaagactactcc 25182523  T
Q  733 acgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    | |||||| || |||||||||| ||||||||||||||||    
T  25182522 aagtcaaacacacttaactgtgaagttcttatggaatga 25182484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 21814323 - 21814363
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  21814323 ttgaggggtagtgttagaactttatattatttagtatgttt 21814363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 26403398 - 26403438
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  26403398 ttgaggggtagtgttagaactttatattatttagtatgttt 26403438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 633 - 765
Target Start/End: Original strand, 29357341 - 29357473
Alignment:
Q  633 tgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttcc 732  Q
    |||||| ||||| |||||||||||||||||  | | ||||| | ||||| ||||||||||||| ||||| ||  ||||||| ||||| ||| | |  ||     
T  29357341 tgaccctacaaaccaacacgagtcttttcaacgtgctttgttctcactcgcacgcttttcgaggaacttaccggaaggtcatccatcttaagactactct 29357440  T
Q  733 acgtcaaatacgcttaactgtggagttcttatg 765  Q
    | |||||| ||| ||||||||| ||||||||||    
T  29357441 aagtcaaacacggttaactgtgtagttcttatg 29357473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Complemental strand, 46963279 - 46963239
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  46963279 ttgaggggtagtgttagaactttatattatttagtatgttt 46963239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 806
Target Start/End: Complemental strand, 9623391 - 9623297
Alignment:
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||| || | |  |||| |||||| ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||    
T  9623391 gtcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaacta--ccgaaagaagatgcatcttgttgatatag 9623297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Original strand, 35474193 - 35474236
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||||||||||||||||||| |||||||||||| ||||    
T  35474193 ttcttataagtctttcttcaaccatgtagtctcatacctacacg 35474236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 612 - 775
Target Start/End: Complemental strand, 37672442 - 37672279
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||||||| | || | |||||| ||| ||||||| || ||||||  |  |||| ||| ||||||||   ||| ||||||| || ||| |||||    
T  37672442 acgactttaagtatttctgattaaccccataaaccaacacgggtattttcaacgtattttatcctcactcacatattttccgagaaatttcccagaaggt 37672343  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaacta 775  Q
    | |||||  ||||||||||| | |||||| ||||||||||||| | |||||||| ||| |||||    
T  37672342 cgcccattataaaattgttcaaagtcaaacacgcttaactgtgtatttcttatgaaatcaacta 37672279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 708 - 766
Target Start/End: Complemental strand, 1628899 - 1628841
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||||||| ||||||| |||| | ||||||| ||||||| ||||||||||||||    
T  1628899 aggtcacccatcccaaaattgctccaagccaaatacacttaactatggagttcttatgg 1628841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 880
Target Start/End: Original strand, 13124773 - 13124822
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  13124773 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 13124822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 42515618 - 42515565
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||||||    
T  42515618 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggat 42515565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 708 - 770
Target Start/End: Complemental strand, 680002 - 679940
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  680002 aggtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 679940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 559 - 597
Target Start/End: Complemental strand, 15614463 - 15614425
Alignment:
Q  559 gaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  15614463 gaggggtagtgtaagaactttatattatttagtatgttt 15614425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 831 - 881
Target Start/End: Original strand, 26421832 - 26421882
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 881  Q
    ||||||| || ||| |||||||||||||||||||||| ||||||| |||||    
T  26421832 ttcttatgagccttacttcaaccatgcagtctcatacatgcacggcctcag 26421882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 2941829 - 2941882
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||| || ||| |||||||||||||||| |||||||| |||| ||||||||    
T  2941829 ttcttatcagccttccttcaaccatgcagtcccatacctgtacggcctcaggat 2941882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 662
Target Start/End: Original strand, 6747475 - 6747520
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttca 662  Q
    |||||| ||||||||||||||| ||||| |||||| ||||||||||    
T  6747475 tttaagcattgccgactgaccctacaaaccaacacaagtcttttca 6747520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 872
Target Start/End: Original strand, 13125208 - 13125249
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgca 872  Q
    |||||||||| ||| |||||||||||||||| ||||||||||    
T  13125208 ttcttataagccttccttcaaccatgcagtcccatacctgca 13125249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 28495680 - 28495733
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||  ||||||||    
T  28495680 ttcttataagtcttccttcaaccatgtagtcccatacctacacgacctcaggat 28495733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 708 - 769
Target Start/End: Complemental strand, 46425927 - 46425866
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    |||||||||||| ||| | |  |||| |||||  ||||||||||||||||||||||||||||    
T  46425927 aggtcacccatcataagactactccaagtcaagcacgcttaactgtggagttcttatggaat 46425866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 568 - 597
Target Start/End: Original strand, 48643528 - 48643557
Alignment:
Q  568 tgttagaactttatattatttagtatgttt 597  Q
    ||||||||||||||||||||||||||||||    
T  48643528 tgttagaactttatattatttagtatgttt 48643557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 86; Significance: 1e-40; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 3886477 - 3886658
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  3886477 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatccaaa 3886576  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  3886577 aattgctccacgtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 3886658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 8641911 - 8642091
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||||||| ||||   |||||||||||| |||    
T  8641911 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaac-ttcccgtaggtcacccatcttaa 8642009  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  8642010 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 8642091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 34371882 - 34371701
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||    
T  34371882 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaa 34371783  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||| ||||||||||||||| |||        |||||||||||||||||||||||    
T  34371782 aattgctccaagtcaagcacgcttaactgtggtgttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 34371701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 2474675 - 2474494
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| ||| ||||| || ||||  || ||||||||||   ||||||||||||  ||    
T  2474675 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttttcctcactcgcatgcttaccgggaaactttccggtaggtcacccatctcaa 2474576  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2474575 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2474494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 17445331 - 17445512
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  17445331 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 17445430  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||||| |||||||||||||| |||        |||||||||||||||||||||||    
T  17445431 aattgctccaagtcaagcacgcttaactgtggatttcttatggaatgagcta-ccgataagaagatgcatcttgttgatatag 17445512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 629 - 769
Target Start/End: Original strand, 8391203 - 8391343
Alignment:
Q  629 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 728  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||| ||||| |||| || ||||||||||| ||   ||||||||||||| |||||||    
T  8391203 cgactgaccccacaaatcaacacgagtcttctcagcgtgttttgtcctcactcgcacgtttatcgagaaacttcccggtaggtcacccatcccaaaattg 8391302  T
Q  729 ttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
     |||| |||||  |||||||||| |||||||||||||||||    
T  8391303 ctccaagtcaagcacgcttaactatggagttcttatggaat 8391343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 3886933 - 3887080
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||| |||| | ||||||||| ||||| |||||||   | ||||||| |||  ||||||||||||| ||    
T  3886933 attgccgactgaccccacaaaccaacacgagtcttgtcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccagtaggtcacccatccaaa 3887032  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||| ||||||||||||||||    
T  3887033 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatga 3887080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 612 - 769
Target Start/End: Original strand, 18750060 - 18750217
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||||||||  ||||||||||||||| |||| ||||||||||||||| ||||||||| ||||| ||| ||||   | |||||| | | |||||    
T  18750060 acgactttaagtattgttgactgaccccacaaaccaactcgagtcttttcagtgtgttttgtcctcactcgcacactttctaaaaaacttcctagaaggt 18750159  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||||||||||||| |||| ||||| |||| |||| | |||||||||||||||||    
T  18750160 cacccatcctaaaattgctccaagtcaagtacgattaattatggagttcttatggaat 18750217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 189338 - 189191
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||| |||||| |||||||| |||||||||||||||||| | ||||||||| ||||| |||| ||  || ||||||||||   ||||||||||||| ||    
T  189338 attgcggactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcacccatcccaa 189239  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  | ||||||||||||||||||||||||||||    
T  189238 aattgctccaagtcaagcatgcttaactgtggagttcttatggaatga 189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 610 - 770
Target Start/End: Original strand, 29679969 - 29680129
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| || |  ||||||| ||| |||||||  |  |||    
T  29679969 agacgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcatttgcacgcttatcgggaaacttctcggaag 29680068  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||| ||||    
T  29680069 gtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatgtaatg 29680129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 30684432 - 30684574
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||| |||||||||||||||| | ||||||||| |||   ||||||||  |||| |||||||||||||||||||| || |||||||||||||| ||    
T  30684432 attgacgattgaccccacaaatcaatatgagtctttttagtatattttgtccttactcgcacgcttttcgagaaacttttcagaaggtcacccatcccaa 30684531  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| ||  |  |||||||||||||||||||||||||    
T  30684532 aattgctccaagttgagcacgcttaactgtggagttcttatgg 30684574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 42788522 - 42788703
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||| ||||||| ||||||| |||||||||| | ||||||||| ||||| || ||||  |||||||||| ||   |||||||| |||| ||    
T  42788522 attgtcgactgactccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcaagcttaccgagaaacttcccggtaggtcacctatcccaa 42788621  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||||||||||| |||||||| |||        |||||||||||||||||||||||    
T  42788622 aattgctccaagtcaagcacgcttaactgtggagttcttgtggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 42788703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 2474219 - 2474048
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |          | ||||||||||||| ||    
T  2474219 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg----------ataggtcacccatcccaa 2474130  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2474129 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2474048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 34372338 - 34372157
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||| ||| ||| |||||||||| ||||||| | ||||| ||| ||||| ||||||| |||  |||||| ||   |||||||| |||| ||    
T  34372338 attgccgactgacgccataaaccaacacgagtattttcagcgtgttttttcctcactcgcacgcttatcggaaaacttcccggtaggtcaccaatcccaa 34372239  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||| |||||||||||||||| |||        |||||||||||||||||||||||    
T  34372238 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 34372157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 15512888 - 15513035
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||  |  |||||||| ||||| |||||||  || ||||||| ||   |||||| |||||| ||    
T  15512888 attgccgactgaccccacaaaccaacacgagtcttttcaacgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcatccatcccaa 15512987  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| | || |||||  ||| |||| |||||||||||||||||||||    
T  15512988 aattgcttcaagtcaagcacgtttaattgtggagttcttatggaatga 15513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 632 - 771
Target Start/End: Complemental strand, 18304693 - 18304554
Alignment:
Q  632 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 731  Q
    ||||||||| |||||||||||||| | ||||| | ||||||||| ||||| |||  |||  | |||||||  ||||||||||||||||  ||||||| ||    
T  18304693 ctgaccccagaaatcaacacgagtttgttcagcgtgttttgtcctcactcgcacaatttctgtgaaacttctcaaaaggtcacccatcacaaaattgctc 18304594  T
Q  732 cacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || |||||| | ||||||||||||| ||||||||||||||    
T  18304593 caagtcaaacatgcttaactgtggaattcttatggaatga 18304554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 610 - 770
Target Start/End: Complemental strand, 1822190 - 1822030
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||  ||| ||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  || ||||||| ||   ||    
T  1822190 agacgactttaagcattgttgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgggaaacttcccggtag 1822091  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||||| || | |  |||| |||||  |||||||| ||||||||||||||||||||    
T  1822090 gtcacccatccaaagactactccaagtcaagcacgcttaaatgtggagttcttatggaatg 1822030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 618 - 806
Target Start/End: Complemental strand, 22556813 - 22556625
Alignment:
Q  618 ttaagtattgccgactgaccccacaaatcaacacgagtctttt-cagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    ||||| |||| |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||  |||||||||| |    |||||||||    
T  22556813 ttaaggattgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctggtaggtcaccc 22556714  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||| ||||||| |||| ||||   ||||||||||||| ||||||||  |||||| |||        |||||||||||||||||||||||    
T  22556713 atcccaaaattgctccaagtcagccacgcttaactgtgaagttcttaaagaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22556625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 624 - 764
Target Start/End: Original strand, 30684887 - 30685027
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| |||||||||||| |||||||||||||||||| | ||||||||| | ||  |||||||||||  |||||||| | || |||| |||||  ||    
T  30684887 attgccgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcgcttgcacgcttttcggaaaactttcaagaaagtcatccatctcaa 30684986  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttat 764  Q
    |||||||||| |||||  || |||||| || ||||||||||    
T  30684987 aattgttccaagtcaagcacacttaaccgtagagttcttat 30685027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 24182122 - 24182264
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||| |||||||||| |||||||| ||||||||  | ||||| ||| ||||| ||| |||| |||||||||||  | |||||||||||||| ||    
T  24182122 attgtcgactaaccccacaaaccaacacgaatcttttcaacgtgttttatcctcactcgcacactttccgagaaactttttagaaggtcacccatcccaa 24182221  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| |||||  ||||||||||||  |||| ||||||    
T  24182222 aattgctccaagtcaaccacgcttaactgttaagttattatgg 24182264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 624 - 763
Target Start/End: Complemental strand, 22557240 - 22557100
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtctttt-cagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    |||| |||||||||| ||||| ||||||||||||||| ||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| |    
T  22557240 attgtcgactgaccctacaaaccaacacgagtcttttacagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccca 22557141  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttctta 763  Q
    |||||| |||| ||||   ||||||||||||| ||||||||    
T  22557140 aaattgctccaagtcaggcacgcttaactgtgaagttctta 22557100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 624 - 764
Target Start/End: Original strand, 30720136 - 30720276
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||| |||| ||||||| ||||| |||||||||||| | ||||||||| | ||| |||||||||||  || ||||| | || |||| |||||| ||    
T  30720136 attgtcgattgactccacaaaccaacaggagtcttttcagcgtgttttgtcctcgctcgcacgcttttcggaaagctttcaagaaagtcatccatcccaa 30720235  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttat 764  Q
    |||||||||| |||||  ||| |||||||| ||||||||||    
T  30720236 aattgttccaagtcaagcacgattaactgtagagttcttat 30720276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 624 - 770
Target Start/End: Original strand, 10927279 - 10927425
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||| ||||| ||||| |||||||||||||||||| | ||||||||| || ||||||||||  ||| |||||| ||    |||||||||||| ||    
T  10927279 attgtcgaccgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcattcacacgcttaccgaaaaacttcccggtcggtcacccatccaaa 10927378  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     | |  |||| |||||  ||| |||||||||||||||||||||||||    
T  10927379 gactactccaagtcaagcacgtttaactgtggagttcttatggaatg 10927425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 708 - 806
Target Start/End: Complemental strand, 2194002 - 2193905
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  2194002 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 2193905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 668 - 805
Target Start/End: Original strand, 21886066 - 21886202
Alignment:
Q  668 ttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    |||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||||||| |||| |||||  || ||||||| |||||||||||||||    
T  21886066 ttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacacttaactttggagttcttatgga 21886165  T
Q  768 atgaactatnnnnnnngaagatgcatcttgttgatata 805  Q
    |||| |||        ||||||||||||||||||||||    
T  21886166 atgagcta-ccgaaaagaagatgcatcttgttgatata 21886202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 624 - 775
Target Start/End: Original strand, 11757157 - 11757308
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||| |||| ||||| ||||||||| || |  ||| |||| |||||||||||||  ||| ||| || ||   ||||||||||||   |    
T  11757157 attgccgactgaccccgcaaaccaacaagagtcttttaagcggatttcgtcctcactcacacgcttaccgaaaaatttcccggtaggtcacccatctcga 11757256  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaacta 775  Q
    ||||| |  | |||||  |||||||||||||||||||||||||| |||||||    
T  11757257 aattgctgtaagtcaagcacgcttaactgtggagttcttatggattgaacta 11757308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 20858418 - 20858564
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||  |||||||||||||||| ||||||| | ||||||||| ||||  || |||||||   |||||| ||| ||||||| |||||| ||    
T  20858418 attgtcgactgacctaacaaatcaacacgagtattttcagcgtgttttgtcctcactagcatgcttttcagaaaacttcccagaaggtca-ccatcccaa 20858516  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    | ||| |||| |||||  |  ||||||| |||||||||||||||||||    
T  20858517 agttgctccaagtcaagcaaccttaactatggagttcttatggaatga 20858564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 30719681 - 30719823
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||| ||||||||||||| || ||||||||||| |||  ||||||| | | ||| |||||||||| |||||||||  | || ||||||| ||| ||    
T  30719681 attggcgattgaccccacaaattaatacgagtctttttagtatgttttgttctctctcgcacgcttttcaagaaactttttagaatgtcacccgtcccaa 30719780  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| ||  |  |||||||| ||||||||||||||||    
T  30719781 aattgctccaagttgagcacgcttaattgtggagttcttatgg 30719823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 617 - 770
Target Start/End: Complemental strand, 5786122 - 5785969
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||||||||  || ||| || ||||| ||| ||||||||||||| || ||||||||| || ||  |   ||||  | |||||||||| ||| |||| |    
T  5786122 tttaagtattgttgattgatcctacaaaccaatacgagtcttttcaatgtgttttgtcctcattcgtataattttttaaaaactttccagaagatcactc 5786023  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||||||||| |||| |||||| ||||||||  || ||||||||||||||||    
T  5786022 atcctaaaattgctccaagtcaaacacgcttaagcgtagagttcttatggaatg 5785969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 609 - 770
Target Start/End: Original strand, 20039337 - 20039497
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| |||||| |||||| ||||| |  ||||| ||||| |||||||||||| | ||||||||| ||||| |||||||  || ||||||| |||| |    
T  20039337 tagacgactttaagcattgccaactgatca-acaaaccaacatgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccaata 20039435  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||| |||| || | |  || | |||||  || ||||||||| ||||||||||||||||    
T  20039436 ggtcaccaatccaaagactactctaagtcaagcacacttaactgtagagttcttatggaatg 20039497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 655 - 761
Target Start/End: Original strand, 16370618 - 16370724
Alignment:
Q  655 tcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtg 754  Q
    ||||||||||| ||||| ||| || || ||||||||  |||||||||| || || ||||||||||| ||||||| |||| |||||| | ||||||||| |    
T  16370618 tcttttcagtgtgttttttcctcattcgcacgctttatgagaaacttttcagaatgtcacccatcccaaaattgctccaagtcaaacatgcttaactgcg 16370717  T
Q  755 gagttct 761  Q
    | |||||    
T  16370718 gggttct 16370724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 22975082 - 22975135
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||  ||||||||||||||||||| ||||||||||||| ||||||||    
T  22975082 ttcttataagcttttcttcaaccatgcagtcacatacctgcacggcctcaggat 22975135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 24137493 - 24137533
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  24137493 ttgaggggtagtgttagaactttatattatttagtatgttt 24137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 34867864 - 34867812
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  34867864 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 34867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Complemental strand, 1821980 - 1821937
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  1821980 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 1821937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 685
Target Start/End: Complemental strand, 2194074 - 2194013
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacac 685  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| |||    
T  2194074 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcac 2194013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 3887129 - 3887182
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||| |||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  3887129 ttcatataagtcttccttcaaccatgcagtcccatacctgtacggcctcaggat 3887182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 8642106 - 8642159
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| || |||||    
T  8642106 ttcttataagccttccttcaaccatgcagtcccatacctgcacggccttaggat 8642159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 624 - 673
Target Start/End: Original strand, 21883961 - 21884010
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgt 673  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||||    
T  21883961 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgt 21884010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 835 - 883
Target Start/End: Complemental strand, 22556606 - 22556558
Alignment:
Q  835 tataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  22556606 tataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 22556558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Complemental strand, 1880360 - 1880289
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||||| |||||| |||| |||| ||||  ||||| |||||||||||||||||| | ||||||||| |||||    
T  1880360 agacgactttaagcattgtcgacggaccttacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 1880289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 675
Target Start/End: Complemental strand, 34868048 - 34867997
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    ||||||||| || |||||||||||||||||||||||| || | |||||||||    
T  34868048 attgccgacggatcccacaaatcaacacgagtctttttagcgtgttttgtcc 34867997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 597
Target Start/End: Original strand, 9512364 - 9512394
Alignment:
Q  567 gtgttagaactttatattatttagtatgttt 597  Q
    |||||||||||||||||||||||||||||||    
T  9512364 gtgttagaactttatattatttagtatgttt 9512394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 831 - 873
Target Start/End: Original strand, 21886218 - 21886260
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcac 873  Q
    |||||||||| ||| |||||||||||||||| |||||||||||    
T  21886218 ttcttataagccttccttcaaccatgcagtcccatacctgcac 21886260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 189142 - 189089
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| ||||| || |||| ||||||||    
T  189142 ttcttataagccttccttcaaccatgcagtcccatacatgtacggcctcaggat 189089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 743 - 772
Target Start/End: Original strand, 4673466 - 4673495
Alignment:
Q  743 cgcttaactgtggagttcttatggaatgaa 772  Q
    ||||||||||||||||||||||||||||||    
T  4673466 cgcttaactgtggagttcttatggaatgaa 4673495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 880
Target Start/End: Original strand, 10927475 - 10927524
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||    
T  10927475 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctca 10927524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 835 - 880
Target Start/End: Complemental strand, 22557039 - 22556994
Alignment:
Q  835 tataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  22557039 tataagccttccttcaaccatgcagtcccatacctgcacggcctca 22556994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 1e-40; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20056692 - 20056873
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20056692 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20056791  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20056792 aattgctccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20056873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20054412 - 20054593
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20054412 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20054511  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054512 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20054593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20054868 - 20055049
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20054868 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20054967  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054968 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20055324 - 20055505
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20055324 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20055423  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20055424 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20055780 - 20055961
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20055780 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20055879  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20055880 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20055961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20056236 - 20056417
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20056236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20056335  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20056336 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20056417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20057139 - 20057320
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20057139 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20057238  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20057239 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20057320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20057595 - 20057776
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20057595 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20057694  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20057695 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20057776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 16451809 - 16451990
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||  ||| | ||||||| | |  |||||||||   ||||||||||||| ||    
T  16451809 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaa 16451908  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  16451909 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgaacta-ccgaaaagaagatgcatcttgttgatatag 16451990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 16460962 - 16461143
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||  ||| | ||||||| | |  |||||||||   ||||||||||||| ||    
T  16460962 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcatcacgcgcacgcttattggaaaactttccggtaggtcacccatcccaa 16461061  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||||||        |||||||||||||||||||||||    
T  16461062 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgaacta-ccgaaaagaagatgcatcttgttgatatag 16461143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20845537 - 20845718
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  20845537 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 20845636  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||  |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20845637 aatttctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20845718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 38341176 - 38340995
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||| ||| |||||||||||||||| | | ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||    
T  38341176 attgccgactgaccccataaaccaacacgagtcttttccgcgtgttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaa 38341077  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||| |||||||||||||||| |||        |||||||||||||||||||||||    
T  38341076 aattgctccaagtcaagcacgcttaactgtgaagttcttatggaatgagcta-ccgaaatgaagatgcatcttgttgatatag 38340995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 50002951 - 50003132
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||| ||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  50002951 attgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatccaaa 50003050  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||||||||||||| ||||||| |||||||| |||        |||||||||||||||||||||||    
T  50003051 aattgctccaagtcaagcacgcttaactgtgaagttcttttggaatgagcta-ctgaaaagaagatgcatcttgttgatatag 50003132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 51372750 - 51372897
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| |||||||||||| |||||||||||||||||| |  |||||||| ||||| |||||||  ||| |||||| |  | ||||||||||||| ||    
T  51372750 attgccgattgaccccacaaaccaacacgagtcttttcagcggattttgtcctcactcgcacgcttaccgaaaaacttcctgataggtcacccatcccaa 51372849  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| || | |||||  ||||||||||||||||||||||||||||||    
T  51372850 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatga 51372897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20060216 - 20060397
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||| ||  | ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  20060216 attgccgactgaccccacaaaccaacacgagtctttccatcgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 20060315  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  || ||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20060316 aattgatccaagtcaagcacacttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20060397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 52250476 - 52250295
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||| | ||    
T  52250476 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccattccaa 52250377  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| | || |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  52250376 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 52250295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 609 - 806
Target Start/End: Original strand, 50002568 - 50002764
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| ||| || |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || | ||||| ||   |    
T  50002568 tagacgactttcaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggggaacttcccggta 50002667  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||||| ||||||| |||| |||||| |||||||||| |||||||||||  |||||| |||        |||||||||||||||||||||||    
T  50002668 ggtcatccatcccaaaattgctccaagtcaaacacgcttaactatggagttcttaaagaatgagcta-ccgaaaagaagatgcatcttgttgatatag 50002764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 46693611 - 46693758
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| ||||| |  || ||||||||||   ||||||||||||| ||    
T  46693611 attgtcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgcataccgggaaactttccggtaggtcacccatcccaa 46693710  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||||||||||| ||||| |||||    
T  46693711 aattgctccaagtcaagcacgcttaactgtggagttattatgaaatga 46693758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 52250813 - 52250666
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||  ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  52250813 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 52250714  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| | || |||||  ||||||||||||||||||||||||||||||    
T  52250713 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 52250666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 52251150 - 52251003
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||  ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  52251150 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 52251051  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| | || |||||  ||||||||||||||||||||||||||||||    
T  52251050 aattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 52251003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 20053956 - 20054137
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  |   |||||| ||   ||||||||||||| ||    
T  20053956 attgtcgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccagaaaacttcccggtaggtcacccatcccaa 20054055  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||  |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  20054056 aattgctcctagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 20054137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 624 - 775
Target Start/End: Original strand, 7229819 - 7229970
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||| |||||||||| |||||||||| |||||||   ||||| ||| ||||  |||||||||||| |||||||  | ||||||||| |||||||    
T  7229819 attgacgactcaccccacaaagcaacacgagttttttcagcatgttttatcctcactttcacgcttttcgaaaaactttatataaggtcaccaatcctaa 7229918  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaacta 775  Q
    ||||| |||| |||||| | ||||| || ||||||||||||| |||||||||    
T  7229919 aattgctccaagtcaaacatgcttatctatggagttcttatgtaatgaacta 7229970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 35759484 - 35759665
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||| ||| |||||||||||||||||| | ||||||||| ||||| |||||||  ||| |||||| ||   |||||||| |||| ||    
T  35759484 attgccgactgaccccaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaacttcccggtaggtcaccaatcccaa 35759583  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||| | |||| |||||  ||| |||||| || |||||||||||||||| |||        |||||||||||||||||||||||    
T  35759584 aatagctccaagtcaagcacgtttaactatgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 35759665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 617 - 720
Target Start/End: Complemental strand, 7547914 - 7547811
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| |||||||||| ||||||||||||||| |||||||||| |||||||||  |||| ||||||| |||| |||||||||   |||||||||    
T  7547914 tttaagcattgtcgactgaccctacaaatcaacacgagacttttcagtgtgttttgtccttactcgcacgcttatcgaaaaactttccggtaggtcaccc 7547815  T
Q  717 atcc 720  Q
    ||||    
T  7547814 atcc 7547811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 632 - 762
Target Start/End: Complemental strand, 16907497 - 16907366
Alignment:
Q  632 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccac-actcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 730  Q
    ||||||||||||| |||||||||||||| |||||  ||||||||   |||  || ||||||| ||||||||  ||||||||||||||||  ||||||| |    
T  16907497 ctgaccccacaaaccaacacgagtctttccagtgtattttgtcctttacttgcatgcttttcaagaaacttctcaaaaggtcacccatctcaaaattgct 16907398  T
Q  731 ccacgtcaaatacgcttaactgtggagttctt 762  Q
    ||| |||||| |||||||||| ||||||||||    
T  16907397 ccaagtcaaacacgcttaactatggagttctt 16907366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 611 - 770
Target Start/End: Original strand, 43056928 - 43057087
Alignment:
Q  611 gacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaagg 710  Q
    ||||| |||||  ||||||||||||||| ||||| |||||| ||| ||||||||| ||||||||| ||||| || ||||  || ||||||| |||  |||    
T  43056928 gacgactttaataattgccgactgaccctacaaaccaacacaagttttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccagtagg 43057027  T
Q  711 tcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||||||| || |    || | |||||  |||||||||||||||||||||||||||||    
T  43057028 tcacccatccaaagaccactctaagtcaatcacgcttaactgtggagttcttatggaatg 43057087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 624 - 720
Target Start/End: Original strand, 31822995 - 31823091
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 720  Q
    ||||| ||||||||||||||||||||||||||||||||||   ||||||||| ||||| || ||||  |||||||||| |||  |||||||||||||    
T  31822995 attgctgactgaccccacaaatcaacacgagtcttttcagcatgttttgtcctcactcgcatgcttaccgagaaacttcccagtaggtcacccatcc 31823091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 629 - 770
Target Start/End: Complemental strand, 23180995 - 23180854
Alignment:
Q  629 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 728  Q
    ||||| |||| ||||| |||||  |||||||||||   ||||||||  ||||| |||  |||| || |||||||||| ||||| |||||||| ||||||     
T  23180995 cgactaacccgacaaaccaacattagtcttttcagcatgttttgtcgtcactcgcacattttttgaaaaactttccagaaggtaacccatcccaaaattt 23180896  T
Q  729 ttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     |||| |||||  |||||||| |||||| |||||||||||||    
T  23180895 ctccaagtcaagcacgcttaattgtggaattcttatggaatg 23180854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20845733 - 20845785
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  20845733 ttcttataagccttccttcaaccatgcagtctcatacctgcacggcctcagga 20845785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 675
Target Start/End: Original strand, 35759940 - 35759991
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  35759940 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcc 35759991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 612 - 770
Target Start/End: Original strand, 43057387 - 43057545
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| ||||| |||||||   ||||| |||||| |||||||| || | ||||||| | |||||||| ||||  || ||||||| |||  ||||    
T  43057387 acgactttaagaattgctgactgacaatacaaaccaacacaagtctttttagcgtgttttgttctcactcacatgcttaccgggaaacttcccagtaggt 43057486  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| |||| || |    |||| |||||  |||||||||||||||||||||||||||||    
T  43057487 caccgatccaaagaccactccaagtcaatcacgcttaactgtggagttcttatggaatg 43057545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 35760986 - 35761039
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||  || |||||||||||||||||||||||||||||| ||||||||    
T  35760986 ttcttataagctttccttcaaccatgcagtctcatacctgcacggcctcaggat 35761039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20054152 - 20054204
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20054152 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20054204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20054608 - 20054660
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20054608 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20054660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20055064 - 20055116
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055064 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20055116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20055520 - 20055572
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055520 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20055572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20055976 - 20056028
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20055976 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20056028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20056432 - 20056484
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20056432 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20056484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20057335 - 20057387
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  20057335 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 20057387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 715 - 767
Target Start/End: Original strand, 31822630 - 31822682
Alignment:
Q  715 ccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    |||||| |||||||||||| |||||| ||||||||||||||||||||| ||||    
T  31822630 ccatcccaaaattgttccaagtcaaaaacgcttaactgtggagttcttttgga 31822682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 38340980 - 38340928
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  38340980 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 38340928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 617 - 772
Target Start/End: Complemental strand, 35168782 - 35168629
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    ||||||||||| | |||||||||||||||||| |||||||||| | | |  |||||||| |||||| || |||||| ||||| ||| || | || || ||    
T  35168782 tttaagtattgtcaactgaccccacaaatcaatacgagtctttcccgcgtattttgtcctcactcatactcttttcaagaaa-ttttcagatggcca-cc 35168685  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaa 772  Q
    |||  | ||||  |||| || ||| |||||||||||||||| ||| ||||||||||    
T  35168684 atcacacaattactccaagttaaacacgcttaactgtggagctctaatggaatgaa 35168629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 831 - 881
Target Start/End: Original strand, 30873022 - 30873072
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 881  Q
    |||||| ||||||| |||||||||| ||||||||||||||||||| |||||    
T  30873022 ttcttaaaagtcttccttcaaccatacagtctcatacctgcacggcctcag 30873072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 682
Target Start/End: Original strand, 49996556 - 49996614
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactca 682  Q
    |||||||||||||||||||||  |||| |||||||||||| | ||||||||| ||||||    
T  49996556 attgccgactgaccccacaaactaacaagagtcttttcagcgtgttttgtcctcactca 49996614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 698 - 775
Target Start/End: Complemental strand, 8278153 - 8278076
Alignment:
Q  698 actttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaacta 775  Q
    ||||| ||||||||||||||||| ||||||| | || |||||  |||||||||||||||||  ||||| |||| ||||    
T  8278153 acttttcaaaaggtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagtctttatgaaatggacta 8278076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 35759680 - 35759733
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| ||||||||    
T  35759680 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcaggat 35759733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 43057595 - 43057648
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||||| ||||||||    
T  43057595 ttcttataagccttccttcaaccatgtagtctcatacctacacggcctcaggat 43057648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 11993524 - 11993564
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  11993524 ttgaggggtagtgttagaagtttatattatttagtatgttt 11993564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 20057791 - 20057843
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||| |||||||    
T  20057791 ttcttataagccttctttcaaccatgcagtcccatacctgcacggcctcagga 20057843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 566 - 597
Target Start/End: Original strand, 10354265 - 10354296
Alignment:
Q  566 agtgttagaactttatattatttagtatgttt 597  Q
    ||||||||||||||||||||||||||||||||    
T  10354265 agtgttagaactttatattatttagtatgttt 10354296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 567 - 597
Target Start/End: Complemental strand, 11749805 - 11749775
Alignment:
Q  567 gtgttagaactttatattatttagtatgttt 597  Q
    |||||||||||||||||||||||||||||||    
T  11749805 gtgttagaactttatattatttagtatgttt 11749775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 709 - 771
Target Start/End: Original strand, 50002246 - 50002308
Alignment:
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||| |||| ||||||| |||| |||||  || || ||||||||||||||||||||||||    
T  50002246 ggtcaccaatcccaaaattgctccaagtcaagcacactcaactgtggagttcttatggaatga 50002308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 2328389 - 2328340
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| ||||    
T  2328389 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctca 2328340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 16907308 - 16907259
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| |||  |||||||||||||| |||||||||||| ||||||    
T  16907308 ttcttataagccttctttcaaccatgcagtttcatacctgcacagtctca 16907259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 20061263 - 20061316
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||  || |||||||||||||||| ||||||||||||  ||||||||    
T  20061263 ttcttataagctttccttcaaccatgcagtcccatacctgcacgacctcaggat 20061316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 880
Target Start/End: Original strand, 31822735 - 31822784
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    ||||||||| |||| ||||||||||| |||||||||||| ||||| ||||    
T  31822735 ttcttataaatcttccttcaaccatgtagtctcatacctacacggcctca 31822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 675
Target Start/End: Original strand, 35009870 - 35009935
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    |||||| ||| || ||||||||||||||| |||||  |||| |||| ||||||||| |||||||||    
T  35009870 agacgactttgagcattgccgactgaccctacaaacgaacatgagttttttcagtgtgttttgtcc 35009935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 50002779 - 50002832
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| ||| ||| ||||| ||||||||    
T  50002779 ttcttataagccttccttcaaccatgcagtcccatgcctacacggcctcaggat 50002832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 1e-37; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 624 - 768
Target Start/End: Complemental strand, 14820424 - 14820280
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||  || ||||  || |||||||||| | ||||||||||||| ||    
T  14820424 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgcttaccgggaaactttccgataggtcacccatcccaa 14820325  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaa 768  Q
    |||||||||| |||||  |||||||||||||||||||||||||||    
T  14820324 aattgttccaagtcaagcacgcttaactgtggagttcttatggaa 14820280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 13150430 - 13150611
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  13150430 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 13150529  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13150530 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13150611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 31284152 - 31284333
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||| | | ||||||||| ||||| ||||||| |||  |||||| ||   ||||||||||||| ||    
T  31284152 attgccgactgaccccacaaaccaacacgagtcttttcggcgtgttttgtccccactcgcacgcttgtcggaaaacttcccggcaggtcacccatcccaa 31284251  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  31284252 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 31284333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 50348016 - 50347835
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| ||| ||| |||||||  |   ||||||||||||| ||    
T  50348016 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttatcgggaaacttctcggtaggtcacccatcccaa 50347917  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  50347916 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccaaaaagaagatgcatcttgttgatatag 50347835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 8067550 - 8067403
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| ||||| |||||| |||||||||||||||||| | ||||||||| ||||| ||||||| ||| ||||||| ||   ||||||||||||| ||    
T  8067550 attgccgattgacctcacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatcccaa 8067451  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||| |||||||||||||||||||    
T  8067450 aattgctccaagtcaagcacgcttaactatggagttcttatggaatga 8067403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 11179910 - 11180091
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||||||| |||  || ||||| | ||   ||||||||||||| ||    
T  11179910 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacacttaccgggaaacatcccggtaggtcacccatcccaa 11180009  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  11180010 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 11180091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 628 - 806
Target Start/End: Complemental strand, 28562011 - 28561835
Alignment:
Q  628 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 727  Q
    ||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   |||||| |||||| ||||||    
T  28562011 ccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttccccgtaggtca-ccatcccaaaatt 28561913  T
Q  728 gttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    | |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  28561912 gctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 28561835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 769
Target Start/End: Original strand, 32386610 - 32386755
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| ||||||||||||||| || | ||||||||| |||||  ||||||  | |||||||||||    |||||||||||| ||    
T  32386610 attgccgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcggacgcttaccaagaaactttccggtgggtcacccatcccaa 32386709  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||    
T  32386710 aattgctccaagtcaagcacgcttaactgtggagttcttatggaat 32386755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 16811649 - 16811504
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| |  |||||||| ||||| || |||| ||| ||||||| ||   ||||||||||||| ||    
T  16811649 attgccgactgaccccacaaaccaacacgagtcttttcagcg--ttttgtcctcactcgcatgcttatcgggaaacttcccggtaggtcacccatcccaa 16811552  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||| ||||||||||||||    
T  16811551 aattgctccaagtcaagcacgcttaactgtggaattcttatggaatga 16811504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 27187205 - 27187353
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||| |||| ||||| ||||||| ||| ||||||| ||   ||||||||||||| |    
T  27187205 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgtttttgtcctcactcgcacgcttatcgggaaacttcccggtaggtcacccatccca 27187304  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||| || | |||||  |||||||||||||||||||||||| |||||    
T  27187305 aaattgctcaaagtcaagcacgcttaactgtggagttcttatgaaatga 27187353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 13149975 - 13150122
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||  ||| |||  |||||||||| ||   ||||||||||| | ||    
T  13149975 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcacacttaccgagaaacttcccggtaggtcacccattccaa 13150074  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  13150075 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 13150122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 615 - 765
Target Start/End: Complemental strand, 3900079 - 3899929
Alignment:
Q  615 attttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcac 714  Q
    ||||| || ||||| ||||||||||||| |||||||||||||||||||    |||||||||| |||||||||||||| | ||||||||||| ||||||||    
T  3900079 attttcagaattgctgactgaccccacagatcaacacgagtcttttcaccttgttttgtccatactcacacgctttttgggaaactttccagaaggtcac 3899980  T
Q  715 ccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    |||| | ||||||| |||| |||||  | |||| | |||||||||||||||    
T  3899979 ccataccaaaattgctccaagtcaagcatgctttattgtggagttcttatg 3899929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 39653434 - 39653253
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  39653434 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 39653335  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  || ||||||||||||||||| ||||||||| |||        |||||||||||||||||||||||    
T  39653334 aattgctccaagtcaagcacacttaactgtggagttctcatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 39653253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 621 - 768
Target Start/End: Complemental strand, 14814222 - 14814075
Alignment:
Q  621 agtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 720  Q
    ||||||||||||| |||||||||| |||||||||||||||||| | ||||||||  ||||| |||||||  || ||||| || |   ||||||||||||     
T  14814222 agtattgccgactaaccccacaaaccaacacgagtcttttcagcgtgttttgtcttcactcgcacgcttaccgggaaacctttcggtaggtcacccatca 14814123  T
Q  721 taaaattgttccacgtcaaatacgcttaactgtggagttcttatggaa 768  Q
     ||||||| |||| |||||  |||||||||||||||||||||||||||    
T  14814122 caaaattgctccaagtcaagcacgcttaactgtggagttcttatggaa 14814075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 32227097 - 32227244
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||||||||||||| || ||||| ||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  32227097 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 32227196  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  32227197 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 32227244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 32227770 - 32227623
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||| ||||| ||||||||||||||||| || ||||| ||| ||||| ||| ||| ||| ||||||| ||   ||||||||||||| ||    
T  32227770 attgtcgactgaccctacaaaccaacacgagtcttttcaatgtgttttttcctcactcgcacacttatcgggaaacttcccggtaggtcacccatcccaa 32227671  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  32227670 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 32227623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 612 - 806
Target Start/End: Original strand, 25802412 - 25802605
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| ||||  ||||||||| ||||| ||||||  |||||||||| | |||||| ||  |||| ||| ||||||||||||||| | | |||||    
T  25802412 acgactttaagcattgttgactgaccctacaaaccaacacacgtcttttcagcgtgttttgaccttactcgcactcttttcgagaaacttcctagaaggt 25802511  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||||| | |  |||| |||||| ||||||||||||||| |||||||||||||  ||||       |||||||||||||||||||||||    
T  25802512 cacccgtcctaagactactccaagtcaaacacgcttaactgtggatttcttatggaatgggctat-cgaaaagaagatgcatcttgttgatatag 25802605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 610 - 769
Target Start/End: Complemental strand, 37045316 - 37045160
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| || |||| ||| |||   | ||   ||    
T  37045316 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttatcgggaa---tcccggtag 37045220  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||    
T  37045219 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaat 37045160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 610 - 770
Target Start/End: Original strand, 25238546 - 25238706
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||  ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||| ||||| || ||||  | | |||||| || | ||    
T  25238546 agacgactttaaccattgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccaaaaaacttcccgatag 25238645  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||| |||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  25238646 gtcaccaatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 25238706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 610 - 806
Target Start/End: Original strand, 4067222 - 4067417
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| ||||| ||||||  |||||||||| | ||||||||| ||||  |||||||  |   |||||||||   ||    
T  4067222 agacgactttaagcattgccgactgaccctacaaaccaacactggtcttttcagcgtgttttgtcctcacttgcacgcttaccagaaaactttccggtag 4067321  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||| |||||| || | |  |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  4067322 gtcatccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatgtaatgagcta-ccaaaaagaagatgcatcttgttgatatag 4067417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 16811195 - 16811048
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||| ||||||||||| |||||||| ||||||||| |  |||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  16811195 attgccgaccgaccccacaaaccaacacgaatcttttcagcgtattttgtcctcactcgcacgcttacggggaaacttcccggtaggtcacccatcccaa 16811096  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| | || |||||  || ||||| |||| ||||||||||||||||    
T  16811095 aattgctacaagtcaagcacacttaaatgtgaagttcttatggaatga 16811048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 612 - 770
Target Start/End: Original strand, 20884981 - 20885139
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| ||||| ||||||||| ||||| |||||||||||||||||| | |||||||||  |||  |||||||  || |||| || ||   ||||    
T  20884981 acgactttaagcattgcagactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctaacttgcacgcttaacgggaaatttcccggtaggt 20885080  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||| || | |  |||| |||||  |||||||| ||||||||||||||||||||    
T  20885081 cacccatccaaatactactccaagtcaagcacgcttaattgtggagttcttatggaatg 20885139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 609 - 766
Target Start/End: Complemental strand, 7477476 - 7477319
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| |||||| |||| |||||||||||||| | ||||| |||||||||||  | | ||||| | ||||| |||||||| ||||||| || ||| ||    
T  7477476 tagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttccgagaaatttcccataa 7477377  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| ||||||||| | |  || | |||||  | |||||| ||||||||||||||||    
T  7477376 ggtcagccatcctaagactactctaagtcaagcatgcttaaatgtggagttcttatgg 7477319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 25238991 - 25239068
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| |||||||||||||    
T  25238991 acgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgctt 25239068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 630 - 765
Target Start/End: Original strand, 53150694 - 53150829
Alignment:
Q  630 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 729  Q
    |||||||||||||||  |||| |||||||||||    ||||||||| ||||| | ||||||| | |||||||  || |||||||||||||| |||||||     
T  53150694 gactgaccccacaaactaacatgagtcttttcaacatgttttgtcctcactcgcccgctttttgggaaacttctcataaggtcacccatcccaaaattgc 53150793  T
Q  730 tccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    |||| || ||  ||| ||||||||| ||||||||||    
T  53150794 tccaagttaagcacggttaactgtgaagttcttatg 53150829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 39641208 - 39641060
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    ||||||||||||  |||||||||| |||| |||||||||||  |||||||||||||  |||||||| ||||| ||| ||| |||              ||    
T  39641208 agacgattttaaacattgccgacttaccctacaaatcaacataagtcttttcagtgcattttgtcctcactcgcacacttatcgt-------------ag 39641122  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||| |||| || | || |||| |||||| ||||||||||||||||||||||||||||||    
T  39641121 gtcaccaatccaaagactgctccaagtcaaacacgcttaactgtggagttcttatggaatga 39641060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 695 - 805
Target Start/End: Complemental strand, 41472499 - 41472390
Alignment:
Q  695 gaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatc 794  Q
    ||||||||||   ||||||||||||| ||||||||| || |||||  ||| ||||| |||||||||||||||||||| |||        |||||||||||    
T  41472499 gaaactttccggtaggtcacccatcccaaaattgtttcaagtcaagcacgtttaaccgtggagttcttatggaatgatcta-ccgaaaagaagatgcatc 41472401  T
Q  795 ttgttgatata 805  Q
    |||||||||||    
T  41472400 ttgttgatata 41472390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 624 - 689
Target Start/End: Complemental strand, 41473811 - 41473746
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||||||||||||| ||||||| |||||||||| | ||||||||| ||||| |||||||    
T  41473811 attggcgactgaccccacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgctt 41473746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 16462863 - 16462903
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  16462863 ttgaggggtagtgttagaactttatattatttagtatgttt 16462903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 770
Target Start/End: Original strand, 25230587 - 25230727
Alignment:
Q  630 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 729  Q
    ||||||||| ||||| |||||||||||||| ||| | ||||||  | ||||| |||||||  || ||||||| |||  ||| |||||||| ||| | |      
T  25230587 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactac 25230686  T
Q  730 tccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| |||||  |||||||| ||| ||||||||||||||||    
T  25230687 tccaagtcaagcacgcttaattgttgagttcttatggaatg 25230727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 630 - 770
Target Start/End: Original strand, 25238174 - 25238314
Alignment:
Q  630 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 729  Q
    ||||||||| ||||| |||||||||||||| ||| | ||||||  | ||||| |||||||  || ||||||| |||  ||| |||||||| ||| | |      
T  25238174 gactgaccctacaaaccaacacgagtctttccagcgtgttttgatctcactcgcacgcttaccgggaaacttcccagtagggcacccatcataagactac 25238273  T
Q  730 tccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| |||||  |||||||| ||| ||||||||||||||||    
T  25238274 tccaagtcaagcacgcttaattgttgagttcttatggaatg 25238314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 28561820 - 28561768
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  28561820 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 28561768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 832 - 884
Target Start/End: Complemental strand, 39641010 - 39640958
Alignment:
Q  832 tcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  39641010 tcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggat 39640958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Complemental strand, 7477265 - 7477222
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  7477265 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 7477222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Complemental strand, 7493955 - 7493912
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  7493955 ttcttataagccttccttcaaccatgcagtctcatacctgcacg 7493912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 770
Target Start/End: Original strand, 25230112 - 25230270
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| |||| |||||||||| ||||| |||||| ||||||| ||  | ||||||||| ||||| | |||||  ||  |||||| |  | ||||    
T  25230112 acgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggt 25230211  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||||| ||| | |  |||| |||||  |||| |||||||||||||||||| |||||    
T  25230212 cacccatcataagactactccaagtcaagcacgcataactgtggagttcttattgaatg 25230270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 612 - 770
Target Start/End: Original strand, 25237699 - 25237857
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| |||| |||||||||| ||||| |||||| ||||||| ||  | ||||||||| ||||| | |||||  ||  |||||| |  | ||||    
T  25237699 acgactttaagcattgtcgactgaccctacaaaccaacactagtctttccaacgtgttttgtcctcactcgctcgcttaccggaaaacttcctgataggt 25237798  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||||| ||| | |  |||| |||||  |||| |||||||||||||||||| |||||    
T  25237799 cacccatcataagactactccaagtcaagcacgcataactgtggagttcttattgaatg 25237857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 766
Target Start/End: Complemental strand, 7494166 - 7494009
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| |||||| |||| |||||||||||||| | ||||| |||||||||||  | | ||||| | ||||| |||||||| || |||| || | | ||    
T  7494166 tagacgactttaagaattgtcgactgaccccacataccaacatgagtcttttcaacgtgctttgttctcactcgcacgctttacgggaaatttcctagaa 7494067  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| |||| |    |||| |||||  | |||||| ||||||||||||||||    
T  7494066 ggtcagccatgctaagacaactccaagtcaagcatgcttaaatgtggagttcttatgg 7494009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 617 - 770
Target Start/End: Complemental strand, 30529963 - 30529811
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||||||||| ||||  |||| |||||| |||||||| || | ||||||||| ||||| || ||||   | ||||||| |||  |||||||||    
T  30529963 tttaagcattgccgactaaccctgcaaaccaacacaagtctttttagcgtgttttgtcctcactcgcatgcttactgggaaactt-ccagtaggtcaccc 30529865  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || | |  |||| |||||  |||||||||| || |||||||||||||||    
T  30529864 atccaaagactactccaagtcaagcacgcttaactatgaagttcttatggaatg 30529811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 32797007 - 32797060
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| ||| |||||||| || |||||||||||    
T  32797007 ttcttataagtcttgcttcaaccatgtagtttcatacctacatggtctcaggat 32797060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 710 - 771
Target Start/End: Complemental strand, 41474181 - 41474120
Alignment:
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||| |||||||||||| |||||  |||||| ||||||||||| |||| ||||||    
T  41474181 gtcacccatcccaaaattgttccaagtcaagcacgcttgactgtggagtttttatagaatga 41474120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 624 - 712
Target Start/End: Complemental strand, 18318925 - 18318837
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtc 712  Q
    |||||||| || ||| ||||| |||| ||| ||||||||| | ||||||| | ||||| |||||||| ||||||||||| || ||||||    
T  18318925 attgccgattgtcccaacaaaccaacccgaatcttttcagcgtgttttgttctcactcgcacgctttgcgagaaacttttcagaaggtc 18318837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 39653238 - 39653186
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| |||||||    
T  39653238 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcagga 39653186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 610 - 681
Target Start/End: Original strand, 25230959 - 25231030
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||||| |||||  ||||||||| ||||  ||||| |||||||||||||||||| | ||||||||| |||||    
T  25230959 agacgactttaaccattgccgaccgaccatacaaaccaacacgagtcttttcagcgtgttttgtcctcactc 25231030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 770
Target Start/End: Complemental strand, 25248382 - 25248235
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtc-ttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    |||| ||||| ||| |||||||||||||||||| ||||||  | ||||||||| ||||| |||||||  || ||||||| ||   |||||| ||||| ||    
T  25248382 attgtcgactaacctcacaaatcaacacgagtctttttcaacgtgttttgtcctcactcgcacgcttaccgtgaaacttcccggtaggtcatccatcata 25248283  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    | | |  |||| |||||  ||||| ||| |||||||| ||||||||||    
T  25248282 agactactccaagtcaagcacgctgaaccgtggagttattatggaatg 25248235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 831 - 866
Target Start/End: Complemental strand, 29224398 - 29224363
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcata 866  Q
    |||||||||||||| |||||||||||||||||||||    
T  29224398 ttcttataagtcttccttcaaccatgcagtctcata 29224363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 707 - 766
Target Start/End: Complemental strand, 29224511 - 29224452
Alignment:
Q  707 aaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    |||||||||||||| ||||||| |||| |||||  |||||||| |||| |||||||||||    
T  29224511 aaggtcacccatcccaaaattgctccaagtcaagcacgcttaattgtgaagttcttatgg 29224452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 831 - 874
Target Start/End: Original strand, 31284348 - 31284391
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||    
T  31284348 ttcttataagccttccttcaaccatgcagtcccatacctgcacg 31284391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 766
Target Start/End: Complemental strand, 15377482 - 15377412
Alignment:
Q  696 aaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    |||||| ||| |||||||||||||| ||||||| |||| |||||  ||  |||||||||||||||| ||||    
T  15377482 aaacttcccagaaggtcacccatcccaaaattgatccaagtcaagcacatttaactgtggagttctaatgg 15377412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 696 - 766
Target Start/End: Complemental strand, 15411153 - 15411083
Alignment:
Q  696 aaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    |||||| |||||||||||||||||| ||||||| |||| |||||  ||  |||||| ||||||||| ||||    
T  15411153 aaacttcccaaaaggtcacccatcccaaaattgatccaagtcaagcacatttaactttggagttctaatgg 15411083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 610 - 652
Target Start/End: Complemental strand, 15417200 - 15417158
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacg 652  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  15417200 agacgactttaattattgccaactgaccccacaaatcaacacg 15417158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 771
Target Start/End: Complemental strand, 2911247 - 2911218
Alignment:
Q  742 acgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||||||||||||||||||||||    
T  2911247 acgcttaactgtggagttcttatggaatga 2911218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 612 - 689
Target Start/End: Complemental strand, 2911366 - 2911289
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| |||| ||| ||| || ||||| |||||||||||||||||  | ||||||||| ||||| |||||||    
T  2911366 acgactttaagcattgtcgattgatcctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgctt 2911289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 834 - 883
Target Start/End: Complemental strand, 14814020 - 14813971
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    ||||||| ||| ||| |||||||||||||||||||| ||||| |||||||    
T  14814020 ttataagccttcctttaaccatgcagtctcatacctacacggcctcagga 14813971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 617 - 766
Target Start/End: Complemental strand, 15405823 - 15405674
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||| |||||| || ||||||  ||||| ||||||| ||  |||||| | | ||||||| ||||  ||| ||||| |  |||||| ||| ||||||||||    
T  15405823 tttatgtattgtcgcctgaccttacaaaccaacacgggttctttcagcgtgctttgtcctcacttgcacacttttaggaaaacttcccagaaggtcaccc 15405724  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    |||| ||||||| |||| |||||  ||  |||||| ||||||||| ||||    
T  15405723 atcccaaaattgatccaagtcaagcacatttaactttggagttctaatgg 15405674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 30529761 - 30529708
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| | ||||||||    
T  30529761 ttcttataagccttacttcaaccatgtagtctcatacctacacagcctcaggat 30529708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 876
Target Start/End: Original strand, 32386806 - 32386851
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggt 876  Q
    |||||||||| ||| |||||||||| ||||| ||||||||||||||    
T  32386806 ttcttataagccttccttcaaccatacagtcccatacctgcacggt 32386851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 41472374 - 41472322
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||||||||||||||||| |||  ||||||||    
T  41472374 ttcttataag-cttccttcaaccatgcagtctcatacctgtacgacctcaggat 41472322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 556 - 597
Target Start/End: Original strand, 42531185 - 42531226
Alignment:
Q  556 tttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    ||||||||  ||||||||||||||||| ||||||||||||||    
T  42531185 tttgagggttagtgttagaactttatactatttagtatgttt 42531226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 80; Significance: 5e-37; HSPs: 2)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 19236 - 19089
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| ||   ||||||||||||| ||    
T  19236 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccggtaggtcacccatcccaa 19137  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||||||||||||||||| |||||    
T  19136 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatga 19089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 19040 - 18987
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||| ||||    
T  19040 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctctggat 18987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 80; Significance: 5e-37; HSPs: 5)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 163010 - 163157
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||||||| |||||  ||||||  |||||||||| || | ||||||||||||| ||    
T  163010 attgccgactggccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgaacgcttaccgagaaacttcccgataggtcacccatcccaa 163109  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  163110 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 163157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 162553 - 162701
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtc-ttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||||||||||| ||||||||||| ||||||| | ||||||||| ||||| ||||||| ||| ||||||| |    ||||||| ||||| |    
T  162553 attgccgactgaccccacaaaccaacacgagtctttttcagcgtgttttgtcctcactcgcacgcttatcgcgaaacttccaggtaggtcactcatccca 162652  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || ||| |||| |||||  ||||||||||| ||||||||||||||||||    
T  162653 aagttgctccaagtcaagcacgcttaactgcggagttcttatggaatga 162701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #3
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 610 - 763
Target Start/End: Complemental strand, 163355 - 163202
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| || |||| |||| ||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | |||||||  |   ||    
T  163355 agacgactttcaggattgtcgacagaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttctcggtag 163256  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttctta 763  Q
    ||||||||||| ||||||| |||| |||||  ||||||||||||||| ||||||    
T  163255 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggaattctta 163202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 69691 - 69838
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||| || ||||| ||||||||||||||| || | | ||||||  |||||||||||||| | | |||||| ||  |||||||||||||| ||    
T  69691 attgccgactgaaccaacaaaccaacacgagtctttttagcgtggtttgtcatcactcacacgctttcccataaacttccctgaaggtcacccatccaaa 69790  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
     | |  |||  |||||   ||| |||||||||||||||||||||||||    
T  69791 gactactcctagtcaagcccgcataactgtggagttcttatggaatga 69838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #5
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 162750 - 162803
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| |||||||||||||||| |||||||| |||| ||||||||    
T  162750 ttcttataagtcttccttcaaccatgcagtcacatacctgtacggcctcaggat 162803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 5e-37; HSPs: 64)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 35871897 - 35871750
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||| |||||||| |||||||||||||||||| | ||||||||| ||||| |||| ||  || |||||||||| | ||||||||||||| ||    
T  35871897 attgccgactgatcccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgtttaccgggaaactttccgataggtcacccatcccaa 35871798  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  35871797 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 35871750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 49998906 - 49998725
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||| ||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  49998906 attgccgactgtccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 49998807  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||| |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  49998806 aattgctccaagtcaaacacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 49998725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 628 - 766
Target Start/End: Original strand, 14571562 - 14571700
Alignment:
Q  628 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 727  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||   |||||    
T  14571562 ccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaatt 14571661  T
Q  728 gttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    | |||| |||||  |||||||||||||||||||||||||    
T  14571662 gctccaagtcaagcacgcttaactgtggagttcttatgg 14571700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 624 - 768
Target Start/End: Original strand, 4127288 - 4127432
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||||||||  || ||||||| || | || |||||||||| ||    
T  4127288 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccgggaaacttcccgatagctcacccatcccaa 4127387  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaa 768  Q
    ||||| |||| | |||  | |||||||||||||||||||||||||    
T  4127388 aattgctccaagccaatcatgcttaactgtggagttcttatggaa 4127432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 23350153 - 23350334
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||   |||||||||  |   |||||| |||||| ||    
T  23350153 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcacacgcttacagagaaacttctcggtaggtcatccatcccaa 23350252  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||| || ||||||||||||| || |||        |||||||||||||||||||||||    
T  23350253 aattgctccaagtcaagcacgcttaactatgaagttcttatggaaggagcta-ccgaaaagaagatgcatcttgttgatatag 23350334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 610 - 771
Target Start/End: Original strand, 44470731 - 44470892
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||  ||||||||| ||||| |||||||||||||| ||| | ||||||||| ||||| |||||||  || ||||||| ||   ||    
T  44470731 agacgactttaagaattgttgactgaccctacaaaccaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtag 44470830  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||| |||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  44470831 gtcaaccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 44470892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 14572024 - 14572163
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||| |||| |||||||||||||||||  | ||||||||| |||||||||||||| |||||||||| ||| |||||||||||||  ||    
T  14572024 attgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaa 14572123  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| || | |||||  ||||||   ||||||||||||||||    
T  14572124 aattgctctaagtcaagcacgctt---tgtggagttcttatgg 14572163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 769
Target Start/End: Original strand, 7678492 - 7678637
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| | |||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  7678492 attgtcgactgaccccacaaacctacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 7678591  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||| |||| |||||  || |||||||||||||||||||||||||    
T  7678592 aattgctccaagtcaagcacacttaactgtggagttcttatggaat 7678637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 610 - 770
Target Start/End: Original strand, 23943098 - 23943258
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||    |    
T  23943098 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggttg 23943197  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  23943198 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 23943258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 612 - 806
Target Start/End: Original strand, 44471183 - 44471376
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| |||| |||||||||| ||||| |||||||||||||| |||   ||||||||| ||||| | |||||  || |||| || ||   ||||    
T  44471183 acgactttaagaattgtcgactgaccctacaaaccaacacgagtctttccagcatgttttgtcctcactcgcccgcttaccgggaaatttcccggtaggt 44471282  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||| ||||||| ||||  ||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  44471283 cacccatcccaaaattgctccaaatcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 44471376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 631 - 761
Target Start/End: Original strand, 8467690 - 8467815
Alignment:
Q  631 actgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 730  Q
    |||||||||||||| |||||||||||||||||  | ||||||||| ||||| || ||||| |||||||||| ||| ||||||||||     ||||||| |    
T  8467690 actgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgctttccgagaaacttcccataaggtcaccc-----aaaattgct 8467784  T
Q  731 ccacgtcaaatacgcttaactgtggagttct 761  Q
    ||| |||||  ||||||||||||||||||||    
T  8467785 ccaagtcaagcacgcttaactgtggagttct 8467815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 667 - 806
Target Start/End: Original strand, 12691912 - 12692050
Alignment:
Q  667 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||| ||||| |||||||  || ||||||| |||  ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  12691912 gttttgtcctcactcgcacgcttaccgggaaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 12692011  T
Q  767 aatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||        |||||||||||||||||||||||    
T  12692012 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 12692050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 624 - 762
Target Start/End: Complemental strand, 13266356 - 13266218
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||| ||||||||||    ||||| ||| ||||| ||| |||||||  |||||| |||||||||||||||||||||    
T  13266356 attgtcgactgaccccacaaaccaacacaagtcttttcaacatgttttctcctcactcgcacacttttcggaaaacttcccaaaaggtcacccatcctaa 13266257  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttctt 762  Q
    ||||  || | |||||  |||||||||||||| ||||||    
T  13266256 aatttctcaaagtcaagcacgcttaactgtggggttctt 13266218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 50398408 - 50398589
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||| ||||| |||||||||||||| |||||  |||||||| ||||| |||||||  ||  |||||| ||   |||||||||||| |||    
T  50398408 attgccgactgaccctacaaaccaacacgagtctttccagtgtattttgtcctcactcgcacgcttaccggtaaacttcccggtaggtcacccatcataa 50398507  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
     | |  |||| |||||  |||||||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  50398508 gaatactccaagtcaagcacgcttaactatggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 50398589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 630 - 766
Target Start/End: Original strand, 27578333 - 27578469
Alignment:
Q  630 gactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgt 729  Q
    |||||| |||||||| || ||||||||||||| | | ||||||||| ||||| ||||||| |||  |||||| ||| |||||| | ||||| ||||||||    
T  27578333 gactgatcccacaaaccatcacgagtcttttctgcgtgttttgtcctcactcgcacgcttgtcggaaaacttcccagaaggtcgctcatcccaaaattgt 27578432  T
Q  730 tccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    || | |||||  |||||||||| ||||||||||||||    
T  27578433 tcgaagtcaagcacgcttaactatggagttcttatgg 27578469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 612 - 770
Target Start/End: Original strand, 1645607 - 1645765
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| |||||| |||||||| ||||| |||||||||||||||||  | ||||||||| ||||| |||||||    |||||||| |    ||||    
T  1645607 acgactttaagcattgccaactgaccctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttacaaagaaacttcctggtaggt 1645706  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  1645707 cacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 1645765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 609 - 767
Target Start/End: Complemental strand, 3169491 - 3169333
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| ||||||||||||| |||||||| ||||| |||||||||| ||||||  | ||||||||| ||||| |||||||  | ||||||||||    |    
T  3169491 tagacgactttaagtattgccaactgaccctacaaaccaacacgagtattttcaacgtgttttgtcctcactcgcacgcttaccaagaaactttctggta 3169392  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    |||||| ||||| || | |  |||| |||||  |||||||| |||||||||||||||||    
T  3169391 ggtcactcatccaaagactactccaagtcaagcacgcttaagtgtggagttcttatgga 3169333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 617 - 771
Target Start/End: Complemental strand, 4185990 - 4185838
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||||||||  ||||||||| |||||| ||||| |||||||| |||| ||||||||| || ||||||||||||||||||| ||  || |||||||||     
T  4185990 tttaagtattgttgactgaccc-acaaattaacac-agtctttttagtgtgttttgtcctcattcacacgcttttcgagaaatttcgcataaggtcacct 4185893  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||| ||||||| |||| |||||  |  ||||||||| |||||||| | ||||||    
T  4185892 atcccaaaattgctccaagtcaagcatacttaactgtagagttcttgtagaatga 4185838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 624 - 766
Target Start/End: Complemental strand, 17628781 - 17628639
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||| ||||| | |||||| ||||||| ||||| ||||||||| ||||||||||||||  | ||| ||| | | |||||||||||||  ||    
T  17628781 attgccgactgactccacataccaacacaagtctttccagtgtgttttgtcctcactcacacgctttatgggaatcttcctagaaggtcacccatctcaa 17628682  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| |||| ||||   ||||| ||||||||| |||||||||    
T  17628681 aattgctccaagtcaggcacgctcaactgtggaattcttatgg 17628639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 610 - 805
Target Start/End: Complemental strand, 21067566 - 21067372
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||  ||||||||| |||||  ||||||||||||||||||| ||||||||| ||||| |||||||  |||||||||||||   ||    
T  21067566 agacgactttaagcattgtggactgacccaacaaactaacacgagtcttttcagtgtgttttgtccccactcgcacgcttaccgagaaactttccggtag 21067467  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 805  Q
    ||||||| ||| || | |  |||| |||||  |||||||| |||||||| ||| | |||||| |||        ||||||||||||||||||||||    
T  21067466 gtcacccctccaaagactactccaagtcaagcacgcttaattgtggagtacttttagaatgagcta-ccggaaagaagatgcatcttgttgatata 21067372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 624 - 768
Target Start/End: Original strand, 24629306 - 24629447
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||||||||  ||||||||||||||||| | ||||||||| ||||| |||||||  || |    || ||   ||||||||||||| ||    
T  24629306 attgccgactgaccccacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggg---tttcccggtaggtcacccatcccaa 24629402  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaa 768  Q
    ||||| |||| |||||  ||||||||||||||| |||||||||||    
T  24629403 aattgctccaagtcaagcacgcttaactgtggaattcttatggaa 24629447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 618 - 767
Target Start/End: Original strand, 27578773 - 27578922
Alignment:
Q  618 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 717  Q
    |||||||||  ||| |||||| |||||||||||| |||||||||||   | ||||||| ||||| ||||||||  | ||||||| ||| |||||||| ||    
T  27578773 ttaagtattctcgattgaccctacaaatcaacacaagtcttttcagcatgatttgtcctcactcgcacgctttctgggaaacttcccagaaggtcacgca 27578872  T
Q  718 tcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    ||| ||||| | |||| || ||  ||||||||||||| ||||||||||||    
T  27578873 tcccaaaatcgctccaagttaagcacgcttaactgtgtagttcttatgga 27578922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 637 - 769
Target Start/End: Original strand, 4127772 - 4127904
Alignment:
Q  637 cccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgt 736  Q
    |||||||| |||||||||||||||||| | ||||||||| |||||||||||||  ||  ||||||| |   ||||||||||||| ||||||| || | |     
T  4127772 cccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttttcggtaggtcacccatcccaaaattgctctaagc 4127871  T
Q  737 caaatacgcttaactgtggagttcttatggaat 769  Q
    |||  |||||||||| || ||||||||||||||    
T  4127872 caagcacgcttaactctgaagttcttatggaat 4127904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 646 - 764
Target Start/End: Original strand, 27578178 - 27578296
Alignment:
Q  646 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgc 745  Q
    |||||||||||||||||| | ||||||||| ||||| |||| |||  | ||||||| ||| |||||||| ||||| |||| || |||| |||||  ||||    
T  27578178 caacacgagtcttttcagcgtgttttgtcctcactcgcacgttttcagggaaacttcccataaggtcactcatcccaaaactgctccaagtcaagcacgc 27578277  T
Q  746 ttaactgtggagttcttat 764  Q
    ||||||||| |||||||||    
T  27578278 ttaactgtgaagttcttat 27578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 4414245 - 4414322
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| ||||||||||||||| ||||| |||||||||||||||||||| |||||||||  |||| |||||||    
T  4414245 acgactttaagcattgccgactgaccctacaaaccaacacgagtcttttcagtgtgttttgtcctgactcgcacgctt 4414322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 628 - 765
Target Start/End: Complemental strand, 41870184 - 41870047
Alignment:
Q  628 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 727  Q
    |||||| ||||||||||| ||||||||||||||||| | ||| ||||  | || ||||||||||||| ||||||| || ||||||  |||||| ||||||    
T  41870184 ccgactaaccccacaaataaacacgagtcttttcagcgtgttctgtcatcccttacacgcttttcgaaaaacttttcagaaggtcttccatcccaaaatt 41870085  T
Q  728 gttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    | || | |||||| | || ||| |||| ||||||||||    
T  41870084 gctctatgtcaaacatgcataattgtgaagttcttatg 41870047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 631 - 770
Target Start/End: Complemental strand, 27026765 - 27026626
Alignment:
Q  631 actgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgtt 730  Q
    |||| |||||||||  ||||||||||||||||| | ||||| ||| || |||||||||||| |  |||||| | | |||||||||| ||| ||||||| |    
T  27026765 actggccccacaaacaaacacgagtcttttcagcgtgttttttcctcagtcacacgctttttggtaaacttcctagaaggtcacccttcccaaaattgct 27026666  T
Q  731 ccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     || |||||  ||||||||||  | |||||||||||||||    
T  27026665 tcaagtcaagcacgcttaactacgtagttcttatggaatg 27026626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 624 - 690
Target Start/End: Complemental strand, 5810104 - 5810038
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 690  Q
    |||||||||| |||||||||||||||| |||||||||||| | ||||| ||| ||||||||||||||    
T  5810104 attgccgactaaccccacaaatcaacatgagtcttttcagcgtgttttatcctcactcacacgcttt 5810038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 624 - 698
Target Start/End: Original strand, 15268043 - 15268117
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaa 698  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  |||||||    
T  15268043 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgagaaa 15268117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 618 - 756
Target Start/End: Complemental strand, 40607207 - 40607069
Alignment:
Q  618 ttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccca 717  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||||| |  |||||||| |||||  ||||||  ||| |||||||||   ||||||||||    
T  40607207 ttaagcattgccgactgattccacaaatcaacacgagttttttcagcgtattttgtcctcactcgaacgcttaccgataaactttccggtaggtcaccca 40607108  T
Q  718 tcctaaaattgttccacgtcaaatacgcttaactgtgga 756  Q
    ||| ||| ||| ||||  ||||| ||| |||||| ||||    
T  40607107 tcccaaatttgctccaaatcaaacacgtttaactatgga 40607069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 667 - 806
Target Start/End: Original strand, 50814738 - 50814876
Alignment:
Q  667 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||| ||||| |||| ||  || ||||||| ||   |||||| |||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  50814738 gttttgtcctcactcgcacgtttaccgggaaacttcccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 50814837  T
Q  767 aatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||        |||||||||||||||||||||||    
T  50814838 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 50814876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 612 - 689
Target Start/End: Complemental strand, 7381549 - 7381472
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| |||||| ||||||||||||||| ||||| ||||||| |||||||||| | ||||||||| ||||| |||||||    
T  7381549 acgactttaagcattgccgactgaccctacaaaccaacacgggtcttttcagcgtgttttgtcctcactcgcacgctt 7381472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 8467866 - 8467919
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  8467866 ttcttataagtcttccttcaaccatgtagtctcatacctgcacagtctcaggat 8467919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 708 - 806
Target Start/End: Original strand, 24628931 - 24629028
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||| || |||        |||||||||||||||||||||||    
T  24628931 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaacgagcta-ctgaaaagaagatgcatcttgttgatatag 24629028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 629 - 806
Target Start/End: Complemental strand, 1464411 - 1464236
Alignment:
Q  629 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 728  Q
    |||| |||||||||||||||||||||| ||||||| | ||| |||||  |||| |||| |||| |  ||||||  || |||||||||||||| |||||||    
T  1464411 cgaccgaccccacaaatcaacacgagt-ttttcagcgtgttgtgtcctaactcgcacgttttttggaaaacttctcagaaggtcacccatcccaaaattg 1464313  T
Q  729 ttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
     |||| || ||  ||||| || |||| |||||||||| ||||| |||        |||||||||||||||||||||||    
T  1464312 ctccaagttaagcacgctaaattgtgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 1464236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 617 - 764
Target Start/End: Complemental strand, 33765137 - 33764990
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| ||| ||||| |||||| ||||||||||||||| |||| |||||| || | |||||| |||||| || |||  | | | || |||||||    
T  33765137 tttaagcattgtcgattgacctcacaaaccaacacgagtctttttagtgtgttttgacctcgctcacatgctttttgaaaaaactcctagaaagtcaccc 33765038  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttat 764  Q
    |||| ||||||| ||||  ||||  |||||||| |||| |||||||||    
T  33765037 atcccaaaattgatccaaatcaagcacgcttaagtgtgaagttcttat 33764990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 675
Target Start/End: Complemental strand, 35477930 - 35477879
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    ||||||||||||||||||||| |||||||||||||||||| | |||||||||    
T  35477930 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcc 35477879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 51331153 - 51331298
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||| |||||  || |||||||||| ||||| ||||||||| || || ||||||| |||| ||| || ||   |||||||||||| |||    
T  51331153 attgccgactgaccctacaaactaatacgagtcttt-cagtgtgttttgtcctcattcgcacgcttatcga-aaatttcccggtaggtcacccatcataa 51331250  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
     | |  |||| |||||  |||||||||||||||||||||||| |||||    
T  51331251 gaatactccaagtcaagcacgcttaactgtggagttcttatgaaatga 51331298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 831 - 885
Target Start/End: Complemental strand, 21067808 - 21067754
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 885  Q
    |||||||||||||| |||||||||||||||| ||||||||||||| ||| |||||    
T  21067808 ttcttataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggatt 21067754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 617 - 771
Target Start/End: Original strand, 52048540 - 52048684
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||| |||||| ||||||| | |||||| ||||| || ||||||||| | ||||||||| ||||  ||| ||||||||||||||| | | ||||||| ||    
T  52048540 tttatgtattgtcgactgatctcacaaaccaacatgaatcttttcagcgtgttttgtcctcacttgcactcttttcgagaaacttcctagaaggtcatcc 52048639  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || ||||||||| |||| ||         ||||||||||||||||||||||||||    
T  52048640 at-ctaaaattgctccaagt---------ttaactgtggagttcttatggaatga 52048684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 695 - 768
Target Start/End: Original strand, 11828426 - 11828499
Alignment:
Q  695 gaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaa 768  Q
    |||| |||||| |||||||||||||| |||| || |||| || ||  |||||||||||||||||||||||||||    
T  11828426 gaaattttccagaaggtcacccatcccaaaaatgctccaagtaaagcacgcttaactgtggagttcttatggaa 11828499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 29628733 - 29628786
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||||||||||| ||||| ||||||||    
T  29628733 ttcttataagtcttccttcaaccatgtagtctcatacctacacggcctcaggat 29628786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 12692065 - 12692117
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| |||||||    
T  12692065 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctcagga 12692117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 16871547 - 16871587
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  16871547 ttgaggggtagtgttagaactttatattatttagtatgttt 16871587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 667 - 739
Target Start/End: Original strand, 26200206 - 26200278
Alignment:
Q  667 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaa 739  Q
    ||||||||| ||||||||||||||||| |||||||  |  |||||||||||||| ||||||| |||| |||||    
T  26200206 gttttgtcctcactcacacgcttttcgtgaaacttcgctgaaggtcacccatcccaaaattgctccaagtcaa 26200278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 610 - 662
Target Start/End: Original strand, 53854703 - 53854755
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttca 662  Q
    |||||| |||||| |||||||||| |||| |||||||||||||||||||||||    
T  53854703 agacgactttaagcattgccgactaaccctacaaatcaacacgagtcttttca 53854755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 710 - 806
Target Start/End: Original strand, 13613854 - 13613948
Alignment:
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||| || | |  |||| |||||| ||||||||||||||||||||||| ||||||||||        |||||||||||||||||||||||    
T  13613854 gtcacccatccaaagactagtccaagtcaaacacgcttaactgtggagttcttatagaatgaacta--ccgaaagaagatgcatcttgttgatatag 13613948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 708 - 771
Target Start/End: Original strand, 21220285 - 21220348
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||| ||| ||||||| |||| |||||| ||||||||||||| ||||||||| ||||||    
T  21220285 aggtcacccgtcccaaaattgctccaagtcaaacacgcttaactgtgtagttcttatagaatga 21220348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 708 - 771
Target Start/End: Original strand, 50398947 - 50399010
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||||||||| ||| | |  |||| |||||| ||||||||||||||||||||||||||||||    
T  50398947 aggtcacccatcataagaatactccaagtcaaacacgcttaactgtggagttcttatggaatga 50399010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 755
Target Start/End: Complemental strand, 17506197 - 17506070
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||| ||| ||||| |||||  | |||||||| || |||||||||    || |||||||||||| ||||||  |||||  |||||||||| ||    
T  17506197 attgtcgactggccctacaaaacaacaatattcttttcaatgtgttttgtcc----tcgcacgcttttcgaaaaacttctcaaaatttcacccatcccaa 17506102  T
Q  724 aattgttccacgtcaaatacgcttaactgtgg 755  Q
    ||||| | ||||||||| |||||||| |||||    
T  17506101 aattgattcacgtcaaacacgcttaattgtgg 17506070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 640 - 770
Target Start/End: Original strand, 23942675 - 23942805
Alignment:
Q  640 acaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaa 739  Q
    ||||| ||||||| ||| |||||  | ||||||||| ||||| ||||||| |   ||||||||||   |||||| |||||| || | |  |||| |||||    
T  23942675 acaaaccaacacgggtcctttcaacgtgttttgtcctcactcgcacgcttatttggaaactttccggtaggtcatccatccaaagactactccaagtcaa 23942774  T
Q  740 atacgcttaactgtggagttcttatggaatg 770  Q
      |||||||||||||||||||||||||||||    
T  23942775 gcacgcttaactgtggagttcttatggaatg 23942805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 646 - 775
Target Start/End: Original strand, 33294784 - 33294913
Alignment:
Q  646 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccac-gtcaaatacg 744  Q
    |||||||||||||||||| | ||||||| | ||||  ||| ||||| |||||| |||||| || | || |||| | ||||||||||||  ||| |  |||    
T  33294784 caacacgagtcttttcagcgtgttttgttctcacttgcacactttt-gagaaattttccataatggcatccattccaaaattgttccaaagtcgagcacg 33294882  T
Q  745 cttaactgtggagttcttatggaatgaacta 775  Q
    ||| ||||||||||||||||||| |||||||    
T  33294883 ctttactgtggagttcttatggagtgaacta 33294913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 880
Target Start/End: Original strand, 44471391 - 44471440
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||| ||||    
T  44471391 ttcttataagtcttccttcaaccatgtagtctcatacctgtacggcctca 44471440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 50399059 - 50399112
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| | |||||||||| ||||||||||||||    
T  50399059 ttcttataagccttccttcaaccatgtaatctcatacctacacggtctcaggat 50399112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 770
Target Start/End: Original strand, 29628624 - 29628684
Alignment:
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||||| || | |  |||| |||||| |||||||||||||||||||||||||||||    
T  29628624 gtcacccatccaaagactactccaagtcaaacacgcttaactgtggagttcttatggaatg 29628684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Complemental strand, 50399374 - 50399335
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcag 663  Q
    ||||||||||||||| ||||| ||||||||||||||||||    
T  50399374 attgccgactgaccctacaaaccaacacgagtcttttcag 50399335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 831 - 885
Target Start/End: Original strand, 1645815 - 1645869
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggatt 885  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||| |||| ||||    
T  1645815 ttcttataagtcttccttcaaccatgtagtcccatacctacacggcctcaagatt 1645869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 834 - 876
Target Start/End: Original strand, 2499663 - 2499705
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggt 876  Q
    |||||||| || ||||||||||| |||||||||||||||||||    
T  2499663 ttataagtgttgcttcaaccatgaagtctcatacctgcacggt 2499705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 735 - 769
Target Start/End: Complemental strand, 14351954 - 14351920
Alignment:
Q  735 gtcaaatacgcttaactgtggagttcttatggaat 769  Q
    |||||| ||||||||||||||||||||||||||||    
T  14351954 gtcaaacacgcttaactgtggagttcttatggaat 14351920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 687 - 769
Target Start/End: Complemental strand, 17029081 - 17028999
Alignment:
Q  687 cttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||||||||||| ||| ||| | ||||||||  |||||| |||| |||||  || ||||||| || ||||||||||||||    
T  17029081 cttttcgagaaacttcccataagtttacccatcccgaaattgctccaagtcaagcactcttaactatgaagttcttatggaat 17028999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 695 - 769
Target Start/End: Complemental strand, 17029529 - 17029455
Alignment:
Q  695 gaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||| ||| ||||||||||| || |||| || |||| || ||  || |||||||||||||||||||||||||    
T  17029529 gaaacttcccagaaggtcacccaacccaaaaatgctccaagttaagcactcttaactgtggagttcttatggaat 17029455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 742 - 771
Target Start/End: Original strand, 15306079 - 15306108
Alignment:
Q  742 acgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||||||||||||||||||||||    
T  15306079 acgcttaactgtggagttcttatggaatga 15306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 843 - 884
Target Start/End: Complemental strand, 20930847 - 20930806
Alignment:
Q  843 tttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||||| ||||| ||||||||||||| |||||    
T  20930847 tttcttcaaccatgcaatctcaaacctgcacggtcttaggat 20930806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 610 - 663
Target Start/End: Original strand, 29628510 - 29628563
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcag 663  Q
    |||||| || ||| |||||||||||| || |||||||||||||||| |||||||    
T  29628510 agacgacttaaagcattgccgactgatcctacaaatcaacacgagttttttcag 29628563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 76; Significance: 1e-34; HSPs: 2)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 3012 - 2865
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||| ||||||| ||    
T  3012 attgccgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtctcccatcccaa 2913  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  2912 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 2865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 2816 - 2763
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  2816 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggat 2763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 75; Significance: 4e-34; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 628 - 766
Target Start/End: Complemental strand, 245814 - 245676
Alignment:
Q  628 ccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaatt 727  Q
    ||||||||||||||||| |||||||||||||||||  | ||||||||| ||||||||| |||| |||||||||| ||||||| |||||||||   |||||    
T  245814 ccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcacacactttccgagaaacttcccaaaagatcacccatctcgaaatt 245715  T
Q  728 gttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    | |||| |||||  |||||||||||||||||||||||||    
T  245714 gctccaagtcaagcacgcttaactgtggagttcttatgg 245676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 624 - 766
Target Start/End: Complemental strand, 245352 - 245213
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||||||| |||| |||||||||||||||||  | ||||||||| |||||||||||||| |||||||||| ||| |||||||||||||  ||    
T  245352 attgccgactgaccccgcaaaccaacacgagtcttttcaccgtgttttgtcctcactcacacgctttccgagaaacttcccagaaggtcacccatctcaa 245253  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| || | |||||  ||||||   ||||||||||||||||    
T  245252 aattgctctaagtcaagcacgctt---tgtggagttcttatgg 245213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 4e-34; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 22026650 - 22026468
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagtttt-gtccacactcacacgcttttcgagaaactttccaaaaggtcacccatccta 722  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||| |||| ||||| |||||||  || ||||||| || | |||| |||||||| |    
T  22026650 attgccgactgaccccacaaaccaacacgagtcttttcagtgtgtttttgtcctcactcgcacgcttaccgggaaacttcccgataggttacccatccca 22026551  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    | |||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  22026550 atattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22026468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 22548425 - 22548606
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  22548425 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaa 22548524  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||    
T  22548525 aattgctccaagtcaagcacgcttaactgtggagttattatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22548606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 41658981 - 41659162
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||   | ||||||| ||   |||||||| |||| ||    
T  41658981 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttacagggaaacttcccggtaggtcacctatcccaa 41659080  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  41659081 aattgctccaagtcaaacacgcttaactgtggagttcttatgtaatgagctat-cgaaaagaagatgcatcttgttgatatag 41659162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 27022215 - 27022361
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||||||||||| || | ||||||||| ||||| |||||||  | | ||||||||||  ||||||||||||| ||    
T  27022215 attgtcgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcgcacgcttaccaa-aaactttccagtaggtcacccatcccaa 27022313  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  27022314 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 27022361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 17103366 - 17103204
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| || |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||    
T  17103366 agacgacttttaggattgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtag 17103267  T
Q  710 gtc-acccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||| |||||||| ||||||| |||| |||||  ||||||||| ||||||||||||||||||||    
T  17103266 gtcaacccatcccaaaattgctccaagtcaagcacgcttaaccgtggagttcttatggaatga 17103204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 610 - 771
Target Start/End: Original strand, 10844477 - 10844638
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| || |||| |||||||||| |||||  ||||||||||||||||| | ||||||||| ||||| || ||||  |||||||||| ||   ||    
T  10844477 agacgacttttaggattgtcgactgaccctacaaacaaacacgagtcttttcagcgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtag 10844576  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||| ||||||| | || |||||  ||||||||||||||||||||||||||||||    
T  10844577 gtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaatga 10844638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 22548871 - 22549052
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||| ||||| | ||||| ||| ||||| |||||||   | ||||||| ||   ||||||||||||| ||    
T  22548871 attgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaacttcccggtaggtcacccatcccaa 22548970  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||| ||||||||||| |||        |||||||||||||||||||||||    
T  22548971 aattgctccaagtcaagcacgcttaactgtggagtttttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 22549052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 624 - 769
Target Start/End: Original strand, 34308811 - 34308956
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||| ||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||  ||    
T  34308811 attgctgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaa 34308910  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||| |||| | |||  ||||||||||||||||||||||||||||    
T  34308911 aattgctccaagccaagcacgcttaactgtggagttcttatggaat 34308956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 25148236 - 25148090
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | |||||| || ||||| |||| || ||| ||||||| ||   ||||||||||||| ||    
T  25148236 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgacctcactcgcacgtttatcg-gaaacttcccggtaggtcacccatcccaa 25148138  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| || | |||||  ||||||||||||||||||||||||||||||    
T  25148137 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatga 25148090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 25147805 - 25147625
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||| | ||||| ||||||| ||  ||||||| ||   ||||||||||||| ||    
T  25147805 attgccgactgaccc-acaaaccaacacgagtcttttcagcgtgttttgtactcactcgcacgcttatcaggaaacttcccggtaggtcacccatcccaa 25147707  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  ||| |||||| ||||||||||||||||||| |||        |||||||||||||||||||||||    
T  25147706 aattgctccaagtcaagcacgattaactatggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 25147625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 769
Target Start/End: Original strand, 34308355 - 34308500
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| || ||||||||||||||| | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||  ||    
T  34308355 attgccgactgaccccacaaaccagcacgagtcttttcagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatctcaa 34308454  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||| |||| | |||  |||||||| |||||||||||||||||||    
T  34308455 aattgctccaagccaagcacgcttaagtgtggagttcttatggaat 34308500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 610 - 720
Target Start/End: Original strand, 15818878 - 15818988
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||||||||||||||| ||||||||| |||||| ||||||||||||| | ||||||| ||||| ||| ||||||| ||||||| ||| |||    
T  15818878 agacgactttaagtattgccgactggccccacaaaccaacacaagtcttttcagtgtgctttgtcctcactcgcacacttttcgggaaacttcccagaag 15818977  T
Q  710 gtcacccatcc 720  Q
    ||| |||||||    
T  15818978 gtcgcccatcc 15818988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 624 - 770
Target Start/End: Original strand, 31283528 - 31283673
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  31283528 attgtcgactgaccccacaaaccaacacgagtcttttcaacgcgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcc-aa 31283626  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||| || | |||||  || ||||||||||||||||||||||||||    
T  31283627 aattgctcaaagtcaagcacacttaactgtggagttcttatggaatg 31283673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 12827130 - 12827311
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||||||||||| |  | |||||  || ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  12827130 attgtcgactgaccccacaaaccaacacgagtcttttaaaagtgttttaacctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 12827229  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  12827230 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 12827311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 610 - 770
Target Start/End: Original strand, 8080204 - 8080364
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| |||||| ||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||||||||| | |  ||    
T  8080204 agacgactttaagcattgtcgactggccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgagaaacttcctagtag 8080303  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    || |||||||| || | |  |||| |||||  ||||||||||||| |||||||||||||||    
T  8080304 gttacccatccaaagactactccaagtcaagcacgcttaactgtgaagttcttatggaatg 8080364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 12100960 - 12100814
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgag-aaactttccaaaaggtcacccatccta 722  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |||| |||||| ||   ||||||||||||| |    
T  12100960 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctta-cgaggaaacttcccggtaggtcacccatcc-a 12100863  T
Q  723 aaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||| |||| |||||  ||||||||||||| |||||||||| |||||    
T  12100862 aaattgctccaagtcaagcacgcttaactgtgaagttcttatgaaatga 12100814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 610 - 806
Target Start/End: Complemental strand, 27926182 - 27925988
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| |||||||||| ||||| ||||||||||||||||||   ||||||||| ||||| ||| |||  || ||||||| ||   |     
T  27926182 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtac 27926083  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
     ||||||||||  |||||| |||| |||||  |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  27926082 ctcacccatcc-caaattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 27925988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 612 - 770
Target Start/End: Complemental strand, 2044340 - 2044182
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||| ||||  ||||||||| ||||| ||| |||||||||||||| | ||||||||| ||||| |||||||  ||  |||||| |||  ||||    
T  2044340 acgactttaagcattggtgactgaccctacaaaccaatacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccattaggt 2044241  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||||||| || | |  |||| |||||  |||||||||||||||||| ||||||||||    
T  2044240 cacccatccaaagactactccaagtcaagcacgcttaactgtggagttattatggaatg 2044182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 617 - 770
Target Start/End: Original strand, 33852127 - 33852280
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| ||||| | ||||||  ||||||||||| ||||||||| || | ||||||||| ||||| ||||||| ||  |||||||||| | |||||||||    
T  33852127 tttaagcattgctgtctgacctgacaaatcaacatgagtctttttagcgtgttttgtcctcactcgcacgcttatcatgaaactttccgataggtcaccc 33852226  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || | |  |||| |||||  |||||||| |||| |||||||||||||||    
T  33852227 atccaaagactactccaagtcaagcacgcttaattgtgaagttcttatggaatg 33852280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 612 - 770
Target Start/End: Complemental strand, 3745383 - 3745225
Alignment:
Q  612 acgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggt 711  Q
    |||| |||||||||| | || |||||| ||||||||||| ||||||||||||   ||||| |   || |||||||||||| |||||||||  || | |||    
T  3745383 acgactttaagtattactgaatgacccaacaaatcaacatgagtcttttcagcatgttttattatcattcacacgctttttgagaaacttctcagatggt 3745284  T
Q  712 cacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    || |||||| ||||||| || | |||||  |||||| ||||||||||| ||||||||||    
T  3745283 cagccatcccaaaattgctctaagtcaagcacgcttgactgtggagttattatggaatg 3745225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 610 - 764
Target Start/End: Original strand, 15567871 - 15568025
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||||||||||||||| ||||||| |  |||||| ||||||| |  | ||||||||| ||||| |||  ||| |||||||||| | | ||     
T  15567871 agacgactttaagtattgccgactggccccacatactaacacgggtctttttaacgtgttttgtcctcactctcacattttccgagaaacttcctagaaa 15567970  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttat 764  Q
     |||||||||| ||||||| ||   ||||| ||||||||| ||||||||||||||    
T  15567971 ttcacccatcccaaaattgctctgagtcaagtacgcttaattgtggagttcttat 15568025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 640 - 770
Target Start/End: Complemental strand, 32292651 - 32292521
Alignment:
Q  640 acaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaa 739  Q
    ||||| |||||||||||||||||| | ||||||||| |||||||||||||  ||  |||||| ||   || |||||||||| || | |  |||| |||||    
T  32292651 acaaaccaacacgagtcttttcagcgtgttttgtcctcactcacacgcttaccggaaaacttcccggtagatcacccatccaaagactactccaagtcaa 32292552  T
Q  740 atacgcttaactgtggagttcttatggaatg 770  Q
      |||||||||||||||||||||||||||||    
T  32292551 gcacgcttaactgtggagttcttatggaatg 32292521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 624 - 776
Target Start/End: Original strand, 27819124 - 27819274
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||||||||||||| |||||||| |||||||||||| | || |||| ||||||||||||||  |  ||||||  || |||||||||||||| ||    
T  27819124 attgtcgactgaccccacaa-tcaacacgggtcttttcagtgtgctt-gtcctcactcacacgctttctggaaaacttatcagaaggtcacccatccaaa 27819221  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactat 776  Q
     | |  || | |||||| || ||||||||||||||| ||||||||||| ||||    
T  27819222 tactactcaaagtcaaacacacttaactgtggagtttttatggaatgagctat 27819274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 614 - 690
Target Start/End: Original strand, 28912720 - 28912796
Alignment:
Q  614 gattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttt 690  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||| |||  ||||||||| |||||||| |||||    
T  28912720 gattttaagtattgccgactgaccaaacaaatcaacacgagtccttttagtatgttttgtcctcactcacaagcttt 28912796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 624 - 720
Target Start/End: Complemental strand, 32292211 - 32292115
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcc 720  Q
    ||||||||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   |||||||||||||    
T  32292211 attgccgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcc 32292115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 21315986 - 21316132
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||| |||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || |||||||  |   ||||||||| | | ||    
T  21315986 attgtcgattgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccg-gaaacttcgcggtaggtcacccttaccaa 21316084  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||  |||| |||||  || ||||||||||||||||||||| |||||    
T  21316085 aattactccaagtcaagcacacttaactgtggagttcttatgaaatga 21316132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 709 - 771
Target Start/End: Complemental strand, 25144957 - 25144895
Alignment:
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    |||||||||||| ||||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  25144957 ggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 25144895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 17103155 - 17103102
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  17103155 ttcttataagtcttccttcaaccatgcagtctcatacctgtacggcctcaggat 17103102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 610 - 710
Target Start/End: Complemental strand, 6466540 - 6466440
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| ||| |||||||||||||| ||||||||| |||||| |||||||| || | | ||||||| |||||  | |||||| ||||||||| |||||||    
T  6466540 agacgactttcagtattgccgactggccccacaaaccaacacaagtctttttagcgtgctttgtcctcactcgtatgctttttgagaaacttcccaaaag 6466441  T
Q  710 g 710  Q
    |    
T  6466440 g 6466440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 763
Target Start/End: Complemental strand, 25308034 - 25307895
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||||||| |||| |||||||||||||||||||||| |   ||||||| ||||| |||||||  ||| |||||||| |  | ||||||||||| ||    
T  25308034 attgccgactgatcccataaatcaacacgagtcttttcagcgtactttgtcctcactcgcacgcttgccgaaaaactttcaagtacgtcacccatccaaa 25307935  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttctta 763  Q
     | |   ||| |||||  | ||||||||||||||||||||    
T  25307934 gactacaccaagtcaagcaagcttaactgtggagttctta 25307895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 624 - 720
Target Start/End: Complemental strand, 9251155 - 9251058
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgag-aaactttccaaaaggtcacccatcc 720  Q
    |||| ||| |||||||||||| |||||| ||| ||||||| | ||||||||| |||||||| | ||||| || |||||| || |||||||||||||||    
T  9251155 attgtcgattgaccccacaaaccaacacaagttttttcagcgtgttttgtcctcactcacatgtttttccagaaaacttccctaaaggtcacccatcc 9251058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 28375126 - 28375179
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||| ||||||||||||||||||||||| ||||||||    
T  28375126 ttcttataagccttccttcaatcatgcagtctcatacctgcacggcctcaggat 28375179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 617 - 770
Target Start/End: Original strand, 30527351 - 30527504
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| ||||||| || |||||||||||||||||||||||| | ||||| ||| ||||| |||||||  || |||  ||||    || ||||||    
T  30527351 tttaagcattgtcgactgatcctacaaatcaacacgagtcttttcagcgtgttttatcctcactcgcacgcttaccgggaagttttcaggtagatcaccc 30527450  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || |||  || | |||||| |  ||||||||||||||||||||| ||||    
T  30527451 atccaaagattactcaaagtcaaacaatcttaactgtggagttcttatgaaatg 30527504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 33852330 - 33852383
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||| || |||||||||| ||||||||||||||||||||||| ||||    
T  33852330 ttcttataagttttccttcaaccatacagtctcatacctgcacggtctcgggat 33852383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 22549067 - 22549119
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||||||| |||||||||||||||| ||||||||||| | |||||||    
T  22549067 ttcttataagtcttccttcaaccatgcagtcacatacctgcacagcctcagga 22549119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Original strand, 41659177 - 41659220
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||||||| |||||||||||||||| ||||||||||||    
T  41659177 ttcttataagtcttccttcaaccatgcagtcccatacctgcacg 41659220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 831 - 881
Target Start/End: Complemental strand, 1297081 - 1297031
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 881  Q
    ||||||||||| || ||||||||||||||||||||||||||| | ||||||    
T  1297081 ttcttataagttttacttcaaccatgcagtctcatacctgcatgatctcag 1297031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 636 - 770
Target Start/End: Complemental strand, 3744896 - 3744762
Alignment:
Q  636 ccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacg 735  Q
    ||||||||| |||||||||||||||||||| ||||||| | || | |||| ||||  |||||||||  ||||  |||||| |||| ||||||| || | |    
T  3744896 ccccacaaaccaacacgagtcttttcagtgtgttttgttctcattaacacactttctgagaaacttctcaaatagtcaccaatcccaaaattgctcaaag 3744797  T
Q  736 tcaaatacgcttaactgtggagttcttatggaatg 770  Q
    | ||  | |||||| ||| ||||||||||| ||||    
T  3744796 ttaataaagcttaattgtagagttcttatgaaatg 3744762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 689
Target Start/End: Original strand, 6463404 - 6463485
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatc-aacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    ||||||| |||||| |||| |||||||||| | ||| | ||||||||||||||||| | ||||||||| ||||| |||||||    
T  6463404 tagacgactttaagcattgtcgactgaccctaaaaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgctt 6463485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 609 - 770
Target Start/End: Complemental strand, 10729908 - 10729747
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaa 708  Q
    ||||||| ||| ||||||||| ||| || |  ||||  ||||||||||||||||| | | ||||||||||||| ||||||||    || | || ||| ||    
T  10729908 tagacgactttcagtattgccaactaactcttcaaaataacacgagtcttttcagcgtgctttgtccacactcgcacgctttctaggatatttcccataa 10729809  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||||||||||  || | |  |||| ||| |  |||||||| ||||||||||||||||||||    
T  10729808 ggtcacccatcaaaagactactccaagtctatcacgcttaattgtggagttcttatggaatg 10729747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 25147610 - 25147557
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||||||||||| ||| |||| |||||    
T  25147610 ttcttataagccttccttcaaccatgcagtctcatacctacacagtcttaggat 25147557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 29971473 - 29971526
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||| |||| ||||||||||| |||||||||||| ||||| ||||||||    
T  29971473 ttcttataaatcttccttcaaccatgtagtctcatacctacacggcctcaggat 29971526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 10844957 - 10844905
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    ||||||||||  || |||||||||||||||| ||||||||||||| |||||||    
T  10844957 ttcttataagctttccttcaaccatgcagtcccatacctgcacggcctcagga 10844905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 623 - 675
Target Start/End: Original strand, 22840424 - 22840476
Alignment:
Q  623 tattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtcc 675  Q
    ||||| |||||||||  ||||| |||||||||||||||||||| |||||||||    
T  22840424 tattgtcgactgaccatacaaaccaacacgagtcttttcagtgtgttttgtcc 22840476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 27925973 - 27925921
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||  ||| |||||||||||||||| ||||||||||||| |||||||    
T  27925973 ttcttataatccttccttcaaccatgcagtcccatacctgcacggcctcagga 27925921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 831 - 874
Target Start/End: Complemental strand, 3744712 - 3744669
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||||||||| |||||||||||||||| ||||||| ||||    
T  3744712 ttcttataagtcttccttcaaccatgcagtcccatacctacacg 3744669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 832 - 883
Target Start/End: Original strand, 10844688 - 10844739
Alignment:
Q  832 tcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    ||||||||| ||| |||||||||||||||| |||||||||| || |||||||    
T  10844688 tcttataagccttccttcaaccatgcagtcccatacctgcaaggcctcagga 10844739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 742 - 806
Target Start/End: Complemental strand, 10845035 - 10844972
Alignment:
Q  742 acgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  10845035 acgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 10844972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 667 - 769
Target Start/End: Original strand, 10729605 - 10729707
Alignment:
Q  667 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||  ||||| ||||||||||  ||||||||||| |||||||  ||||| ||||||| | || | |||  || ||||| |||||||| |||||||    
T  10729605 gttttgtcttcactcgcacgcttttcatgaaactttccataaggtcagtcatcccaaaattgcttcaagccaagcacccttaattgtggagtccttatgg 10729704  T
Q  767 aat 769  Q
    |||    
T  10729705 aat 10729707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 846 - 884
Target Start/End: Complemental strand, 12100750 - 12100712
Alignment:
Q  846 cttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  12100750 cttcaaccatgcagtctcatacctgtacggcctcaggat 12100712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 834 - 884
Target Start/End: Original strand, 30334983 - 30335033
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||  ||||||| ||||||| ||||||||||| ||||||||||    
T  30334983 ttataagtcttctttcaaccttgcagtcgcatacctgcacagtctcaggat 30335033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 624 - 770
Target Start/End: Complemental strand, 41913240 - 41913094
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||| | |||  ||||||||| ||||||  | ||||||||| ||||  |||||||  | |||||||||| |  ||||||| ||||| ||    
T  41913240 attgtcgactgaccctataaactaacacgagttttttcaacgtgttttgtcctcacttgcacgcttaccaagaaactttctagtaggtcactcatccaaa 41913141  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
     | |  | || |||||  ||||||||||| |||||||||||||||||    
T  41913140 gactacttcaagtcaagcacgcttaactgcggagttcttatggaatg 41913094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 2044132 - 2044079
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||||||||||| ||| | ||||||||    
T  2044132 ttcttataagccttccttcaaccatgtagtctcatacctacacagcctcaggat 2044079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 22026453 - 22026404
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| |||  ||||||||||||||| ||||||||||||| ||||    
T  22026453 ttcttataagccttcattcaaccatgcagtcccatacctgcacggcctca 22026404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 27021951 - 27022004
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||||||||| |||||| || || ||||||||    
T  27021951 ttcttataagccttccttcaaccatgcagtcttatacctacatggcctcaggat 27022004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 34308551 - 34308604
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||| ||||||||||| || |||| ||||||||    
T  34308551 ttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggat 34308604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 34309011 - 34309064
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||| ||||||||||| || |||| ||||||||    
T  34309011 ttcttataagccttccttcaaccatacagtctcatacttgtacggcctcaggat 34309064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0499 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 883
Target Start/End: Original strand, 1927 - 2175
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| |  |||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  1927 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtattttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 2026  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatagtgatataggtaatactn 823  Q
    ||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||        ||| |||      
T  2027 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag--------gtagtac-- 2115  T
Q  824 nnnnnnnttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
           |||||||||| ||| |||||||||||||||||||||||||||||| |||||||    
T  2116 caaacaattcttataagccttccttcaaccatgcagtctcatacctgcacggcctcagga 2175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 13409 - 13590
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||    |||||||| ||   ||||||||||||| ||    
T  13409 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacaaagaaacttcccggtaggtcacccatcccaa 13508  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| || | |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  13509 aattgctcaaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 13590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 2e-33; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 30966960 - 30966779
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||| ||||||| |||||||||||||||||  | ||||||||| ||||| |||||||  |||||||||| ||   ||||||||||||| ||    
T  30966960 attgccgactgactccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtaggtcacccatcccaa 30966861  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| || ||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  30966860 aattgctccaagttaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 30966779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 25337873 - 25338054
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||    
T  25337873 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaa 25337972  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  |||||||||||||||||||||||| ||||| ||||       |||||||||||||||||||||||    
T  25337973 aattgctccaagtcaagcacgcttaactgtggagttcttatgaaatgagctat-cgaaaagaagatgcatcttgttgatatag 25338054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 30966504 - 30966357
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||  | ||||||||| ||||| || ||||  |||||||||| ||   ||||||||||||| ||    
T  30966504 attgccgactgaccccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgagaaacttcccggtaggtcacccatcccaa 30966405  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||| |||||||||||||||||||    
T  30966404 aattggtccaagtcaagcacgcttaactatggagttcttatggaatga 30966357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 624 - 762
Target Start/End: Original strand, 32377783 - 32377921
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  ||  |||||| |||  || |||||||||| ||    
T  32377783 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccggaaaacttcccagtagatcacccatcccaa 32377882  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttctt 762  Q
    ||||| |||| |||||| |||||||||||||||||||||    
T  32377883 aattgctccaagtcaaacacgcttaactgtggagttctt 32377921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 33771271 - 33771090
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||| ||||| || ||||  || ||||||| ||   ||||||||||||| ||    
T  33771271 attgccggctgaccccacaaaccaacacgagtcttttcagtgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaa 33771172  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||| |||||  | |||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  33771171 aattgctccaagtcaagcatgcttaactgtggagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 33771090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 24818595 - 24818449
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| ||   ||||||||||||| ||    
T  24818595 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aa 24818497  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  24818496 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 24818449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 624 - 771
Target Start/End: Original strand, 32377592 - 32377739
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||| ||||||| | ||||||||| ||||| |||||||  ||  |||||||||   |||||||| |||| ||    
T  32377592 attgccgactgaccccacaaaccaacacgagttttttcagcgtgttttgtcctcactcgcacgcttaccggaaaactttccggtaggtcacctatcccaa 32377691  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  | ||||||||||||||||||| ||||||||    
T  32377692 aattgctccaagtcaagcatgcttaactgtggagttcttttggaatga 32377739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 624 - 766
Target Start/End: Original strand, 30961759 - 30961901
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| ||||||||||||  ||||| |||||||||| || ||||||||| ||||| ||||||||  ||||||||  ||| |||||||||||||| ||    
T  30961759 attgccgattgaccccacaaactaacacaagtcttttcactgtgttttgtcctcactcgcacgctttctgagaaactacccagaaggtcacccatcccaa 30961858  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||| || | |||||  ||| |||||||||||||||||||||    
T  30961859 aattgctctaagtcaagcacgtttaactgtggagttcttatgg 30961901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 610 - 767
Target Start/End: Complemental strand, 15640018 - 15639861
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| || || |||||||||||||||| | | ||||||||| ||||| ||||||| ||||||||||| |||  ||    
T  15640018 agacgactttaagcattgccgactgaccctaccaaccaacacgagtcttttctgcgtgttttgtcctcactcgcacgcttatcgagaaacttcccagtag 15639919  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
    ||||||||||| || | |  |||| |||||  |||||||| |||||||||||| ||||    
T  15639918 gtcacccatccaaagactactccaagtcaagcacgcttaattgtggagttcttgtgga 15639861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 617 - 770
Target Start/End: Complemental strand, 16379214 - 16379061
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| || | |||||||||    
T  16379214 tttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacccggaaacttcccgataggtcaccc 16379115  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  16379114 atccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaatg 16379061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 617 - 770
Target Start/End: Complemental strand, 16379670 - 16379517
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| ||| |||||| ||||| |||||||||||||||||| | ||||||||| ||||| |||||||   | ||||||| ||   |||||||||    
T  16379670 tttaagcattgtcgaatgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttacagtgaaacttcccggtaggtcaccc 16379571  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || |||  |||| |||||| |||||||||||||||||||||||||||||    
T  16379570 atccaaagattactccaagtcaaacacgcttaactgtggagttcttatggaatg 16379517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 610 - 770
Target Start/End: Complemental strand, 1912808 - 1912648
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||| | ||||| |||||||||||||||||  | ||||||||| ||||| |||||||  |||||||||| ||   ||    
T  1912808 agacgactttaagcattgccgactgactctacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcacgcttaccgagaaacttcccggtag 1912709  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    || |||||||| || | |  |||| |||||  |||||||||||||||||||||||||||||    
T  1912708 gtaacccatccaaagagtactccaagtcaatcacgcttaactgtggagttcttatggaatg 1912648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 646 - 806
Target Start/End: Complemental strand, 8256774 - 8256615
Alignment:
Q  646 caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgc 745  Q
    ||||| |||||||||||| |  |||||||| ||||| ||||||| |||  |||||| |||  ||||||||||||| ||||||| |||| |||||  ||||    
T  8256774 caacatgagtcttttcagcgtattttgtcctcactcgcacgcttatcggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcacgc 8256675  T
Q  746 ttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    |||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  8256674 ttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 8256615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 624 - 765
Target Start/End: Original strand, 30963139 - 30963280
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| ||||| |||||| |||||||||||||||||  |  |||| ||| ||||| |||||||| |||||||||| | | |||||||| ||||| ||    
T  30963139 attgccgattgacctcacaaaccaacacgagtcttttcaacgtattttatcctcactcgcacgctttccgagaaacttccaagaaggtcactcatcccaa 30963238  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    ||||| |||| |||||  |||||||||||| || ||||||||    
T  30963239 aattgctccaagtcaagcacgcttaactgttgaattcttatg 30963280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 610 - 767
Target Start/End: Complemental strand, 15620186 - 15620025
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaat----caacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca 705  Q
    |||||| |||||| ||| ||||||||||| || |||    |||||||||||||||||| ||||||||||| ||||| |||||||  |||||||||| |||    
T  15620186 agacgactttaagcatttccgactgaccctaccaattaaccaacacgagtcttttcagcgagttttgtcctcactcgcacgcttaccgagaaacttccca 15620087  T
Q  706 aaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgga 767  Q
      ||||||||||||| || | |  || | |||||  |||||||| |||||||||||||||||    
T  15620086 gtaggtcacccatccaaagactactcaaagtcaagcacgcttaattgtggagttcttatgga 15620025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 626 - 766
Target Start/End: Original strand, 30963598 - 30963738
Alignment:
Q  626 tgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaa 725  Q
    |||||||||| |||||||| ||| ||||||||||||| || ||||||||| ||||| |||| ||| ||| |||||| | | ||||||||| |||| ||||    
T  30963598 tgccgactgatcccacaaaccaaaacgagtcttttcactgtgttttgtcctcactcgcacggtttccgacaaacttcctagaaggtcacctatcccaaaa 30963697  T
Q  726 ttgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
     |   ||| |||||  |||||||||||||||||| ||||||    
T  30963698 ctccgccaagtcaagcacgcttaactgtggagttattatgg 30963738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 667 - 806
Target Start/End: Complemental strand, 41754516 - 41754378
Alignment:
Q  667 gttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||| ||||| |||| ||  || ||||||||||   |||||| |||||| ||||||| |||| |||||  |||||||||||||||||||||||||    
T  41754516 gttttgtcctcactcgcacgtttaccgggaaactttccggtaggtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatgg 41754417  T
Q  767 aatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| |||        |||||||||||||||||||||||    
T  41754416 aatgagcta-ccgaaaagaagatgcatcttgttgatatag 41754378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 624 - 806
Target Start/End: Original strand, 5399693 - 5399874
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||| ||||||| ||| | ||||||| | ||||| |||||||  ||  |||||| |    ||||||||||||| ||    
T  5399693 attgtcgactgaccccacaaaccaacacaagtctttccagcgtgttttgttctcactcgcacgcttaccggaaaacttcctggtaggtcacccatcccaa 5399792  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||  |||| |||||  |||||||||| || |||||||||||||||| |||        |||||||||||||||||||||||    
T  5399793 aatttctccaagtcaagcacgcttaactatgaagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 5399874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 708 - 806
Target Start/End: Complemental strand, 11388373 - 11388276
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||||||||||| ||||||| |||| |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  11388373 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 11388276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 617 - 770
Target Start/End: Original strand, 25433925 - 25434078
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| ||||||||||||||| ||||| |||||||| ||||||||| | |||||||||  ||||||||||||  |   |||||| ||    ||||||||    
T  25433925 tttaagcattgccgactgaccctacaaaccaacacgaatcttttcagcgtgttttgtccttactcacacgcttaccagaaaacttccctgttggtcaccc 25434024  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    |||| || |    |||| |||||  |||||||||||||||||||||||||||||    
T  25434025 atccaaagaccactccaagtcaagcacgcttaactgtggagttcttatggaatg 25434078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 624 - 764
Target Start/End: Complemental strand, 13191244 - 13191104
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||| ||| ||| |||||| |||||||| || | ||||||||| || |||||||||||| ||||||||||||| ||||||||| |||  ||    
T  13191244 attgtcgactgactccataaaccaacactagtctttttagcgtgttttgtccgcattcacacgctttttgagaaactttccagaaggtcacctatctcaa 13191145  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttat 764  Q
    ||||  | || |||||  || | ||||| ||||||||||||    
T  13191144 aatttcttcaagtcaagcacacataactatggagttcttat 13191104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 632 - 805
Target Start/End: Original strand, 29259504 - 29259676
Alignment:
Q  632 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 731  Q
    |||| |||||||| |||||||||||||||||  | ||||||||| ||||| || ||||  || ||||||| ||   ||||||||||||| ||||||| ||    
T  29259504 ctgatcccacaaaccaacacgagtcttttcaacgtgttttgtcctcactcgcatgcttaccgggaaacttcccggtaggtcacccatcccaaaattgctc 29259603  T
Q  732 cacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatata 805  Q
     | |||||  |||||||||| || |||||||||| ||||| |||        ||||||||||||||||||||||    
T  29259604 aaagtcaagcacgcttaactatgaagttcttatgaaatgagcta-ccgaaaagaagatgcatcttgttgatata 29259676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 83287 - 83140
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| | |||||||||| |||||  |||||| |||  | ||||||||| ||||| ||| ||||  || ||| |  || |||||||||  |||  ||    
T  83287 attgccgaataaccccacaaaccaacataagtcttatcaacgtgttttgtcctcactcgcacactttctgaaaaattaccctaaaggtcacatatcacaa 83188  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||  ||||| |||||||||||| |||||||||||||||||    
T  83187 aattgttccaaatcaaacacgcttaactgtagagttcttatggaatga 83140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 708 - 769
Target Start/End: Complemental strand, 11394719 - 11394658
Alignment:
Q  708 aggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||||||||| ||||||| |||| |||||  ||||||||||||| ||||||||||||||    
T  11394719 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtgaagttcttatggaat 11394658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 624 - 806
Target Start/End: Complemental strand, 33175226 - 33175047
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||| |||||  ||||||||||||| ||| | ||||||||| ||||| |||||||  || | || || ||   |||||||||||| |||    
T  33175226 attgccgactgaccctacaaactaacacgagtctttccagcgtgttttgtcctcactcgcacgcttaccg-ggaatttcccggtaggtcacccatcataa 33175128  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
     | |  |||| ||| || |||||||||||||||||||||||| ||||| |||        |||||||||||||||||||||||    
T  33175127 gaatactccaagtc-aacacgcttaactgtggagttcttatgaaatgagcta-ccaaaaagaagatgcatcttgttgatatag 33175047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 41754363 - 41754314
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| |||||||||||||||||||||||||||||| ||||    
T  41754363 ttcttataagccttccttcaaccatgcagtctcatacctgcacggcctca 41754314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 8986823 - 8986863
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  8986823 ttgaggggtagtgttagaactttatattatttagtatgttt 8986863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 610 - 765
Target Start/End: Complemental strand, 1707325 - 1707170
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| ||||||||||||||| | |||||||| ||| |||||| || | |||||||   ||||| |||||||  || ||||||| |    ||    
T  1707325 agacgactttaagcattgccgactgaccctataaatcaacgcgaatctttttagcgtgttttgtattcactcgcacgcttaccgggaaacttcctggtag 1707226  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    ||||||||||| || | |  | || |||||| || |||||||||||||||||||||    
T  1707225 gtcacccatccaaagactacttcaagtcaaacactcttaactgtggagttcttatg 1707170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 831 - 874
Target Start/End: Complemental strand, 1953229 - 1953186
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacg 874  Q
    |||||||| ||||| |||||||||||||||||||||||||||||    
T  1953229 ttcttataggtcttccttcaaccatgcagtctcatacctgcacg 1953186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 770
Target Start/End: Complemental strand, 8074162 - 8074016
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| ||||||| ||||||||  ||||| ||| ||||||  | ||||||| | || |||||| |||||||||||||||||   |||||||| ||||| ||    
T  8074162 attgtcgactgatcccacaaacaaacacaagttttttcatcgtgttttgttctcaatcacacacttttcgagaaactttctggaaggtcactcatcccaa 8074063  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatg 770  Q
    ||||   ||| |||||  | ||||| || ||||||||||||| ||||    
T  8074062 aatttaaccaagtcaagaaggcttatctatggagttcttatgaaatg 8074016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 624 - 686
Target Start/End: Complemental strand, 20502234 - 20502172
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacg 686  Q
    ||||||||||||||| |||||  ||||||||||||||||| | ||||||||| ||||| ||||    
T  20502234 attgccgactgaccctacaaactaacacgagtcttttcagcgtgttttgtcctcactcgcacg 20502172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 1707115 - 1707062
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| |||||| |||| |||||||||||| ||| ||||||||||    
T  1707115 ttcttataagtcttccttcaatcatgtagtctcatacctacacagtctcaggat 1707062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 835 - 884
Target Start/End: Complemental strand, 16379463 - 16379414
Alignment:
Q  835 tataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||| ||||    
T  16379463 tataagtcttccttcaaccatgcagtcccatacctgcacggcctcgggat 16379414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 18447990 - 18448043
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  18447990 ttcttataagtcttacttcaaccatgtagtcacatacctacacggcctcaggat 18448043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 716 - 806
Target Start/End: Complemental strand, 29804860 - 29804771
Alignment:
Q  716 catcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||| ||||||| | || |||||  |||||||||||||||||||||||||||||| |||        |||||||||||||||||||||||    
T  29804860 catcccaaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaatgagcta-ccgaaaagaagatgcatcttgttgatatag 29804771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 30966308 - 30966255
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| ||||||||    
T  30966308 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctcaggat 30966255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Original strand, 25338069 - 25338121
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||  |||||||    
T  25338069 ttcttataagccttccttcaaccatgcagtcccatacctgcacgacctcagga 25338121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 597
Target Start/End: Original strand, 32291050 - 32291090
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| ||||||||| ||||||||||||||||||||||    
T  32291050 ttgaggggtagtgttagatctttatattatttagtatgttt 32291090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 557 - 597
Target Start/End: Complemental strand, 38583705 - 38583665
Alignment:
Q  557 ttgaggggcagtgttagaactttatattatttagtatgttt 597  Q
    |||||||| |||||||||||||||||||| |||||||||||    
T  38583705 ttgaggggtagtgttagaactttatattacttagtatgttt 38583665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 24818400 - 24818347
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||||||| ||||||||    
T  24818400 ttcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggat 24818347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 25434128 - 25434181
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||| |||||| |||||| ||||||||    
T  25434128 ttcttataagccttccttcaaccatgaagtcccataccagcacggcctcaggat 25434181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 27882998 - 27883051
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    ||||||||||  || ||||||| |||||||||||||| ||||||| ||||||||    
T  27882998 ttcttataagcattccttcaacaatgcagtctcatacatgcacggcctcaggat 27883051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 33175032 - 33174979
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||| ||||||| ||||| ||||||||    
T  33175032 ttcttataagccttccttcaaccatgtagtcccatacctacacggcctcaggat 33174979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 72; Significance: 3e-32; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 1490 - 1343
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||| ||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  || ||||||| ||   ||||||||||||| ||    
T  1490 attgtcgactgacgccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaacttcccggtaggtcacccatcccaa 1391  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  1390 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 1343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 831 - 883
Target Start/End: Complemental strand, 1294 - 1242
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcagga 883  Q
    |||||||||| ||| |||||||||||||||| |||||||||| || |||||||    
T  1294 ttcttataagccttccttcaaccatgcagtcccatacctgcatggcctcagga 1242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 72; Significance: 3e-32; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 580 - 433
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||||||||| |||||||||||||||||| | ||||||||| |||||||| |||| ||| ||||||| ||   ||||||||||||| ||    
T  580 attgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcacatgcttatcgggaaacttcccggtaggtcacccatcccaa 481  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  |||||||||| ||||| | |||||||||||    
T  480 aattgctccatgtcaagcacgcttaactatggagattttatggaatga 433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 69; Significance: 2e-30; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 627 - 771
Target Start/End: Original strand, 107342 - 107486
Alignment:
Q  627 gccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaat 726  Q
    |||||||||||||||||| ||||||||||||||||||   ||||||||| ||||| |||||||  || ||||||| ||   | ||||||||||| |||||    
T  107342 gccgactgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacgcttaccgggaaacttcccggtacgtcacccatcccaaaat 107441  T
Q  727 tgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || |||| |||||  ||||||||||||||||||||||||||||||    
T  107442 tgctccaagtcaagcacgcttaactgtggagttcttatggaatga 107486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 831 - 881
Target Start/End: Original strand, 107535 - 107585
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcag 881  Q
    |||||||||| ||| |||||||||||||||| |||||||| |||| |||||    
T  107535 ttcttataagccttccttcaaccatgcagtcccatacctgtacggcctcag 107585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 68; Significance: 7e-30; HSPs: 3)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 610 - 765
Target Start/End: Original strand, 17460 - 17615
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    ||||||||||||||||||||||||||||| |  || |||||||||||||||||| | ||||||||| ||||| |||||||  ||| |||||||| |  ||    
T  17460 agacgattttaagtattgccgactgaccctatgaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgaaaaactttcgagtag 17559  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatg 765  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||    
T  17560 gtcacccatccaaagagtactccaagtcaagcacgcttaactgtggagttcttatg 17615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 610 - 769
Target Start/End: Original strand, 17997 - 18156
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||| |||||| |||| ||| |||||| |||||||||||||||||||||||| | ||| ||||| ||||| |||| ||  ||| ||||||||||| ||    
T  17997 agacgactttaagcattgtcgattgaccctacaaatcaacacgagtcttttcagcgtgttgtgtcctcactcgcacgtttaccgaaaaactttccaatag 18096  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||||||||| || | |  |||| |||||  ||||||||||||||||||||||||||||    
T  18097 gtcacccatccaaagactactccaagtcaagcacgcttaactgtggagttcttatggaat 18156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 18206 - 18259
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||||||| ||||||| ||| |||| ||||||| ||||| ||||||||    
T  18206 ttcttataagtcttccttcaactatgtagtcacatacctacacggcctcaggat 18259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 10569 - 10423
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  ||||||| ||   ||||||||||||| ||    
T  10569 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttcccggtaggtcacccatcc-aa 10471  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  10470 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 10423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Complemental strand, 10374 - 10321
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||| |||||||||||| ||||| ||||||| ||||||||    
T  10374 ttcttataagccttccttgaaccatgcagtcccatacatgcacggcctcaggat 10321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 7e-30; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 155027 - 154880
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| |||||||||||||||||| | ||||||||| ||||  ||| |||  |||||||||| ||   ||||||||||| | ||    
T  155027 attgtcgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactagcacacttaccgagaaacttcccggtaggtcacccattccaa 154928  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  154927 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 154880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 681
Target Start/End: Complemental strand, 154572 - 154515
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactc 681  Q
    |||| ||||||||||||||||||||||||||||||||||| | ||||||||| |||||    
T  154572 attgtcgactgaccccacaaatcaacacgagtcttttcagcgtgttttgtcctcactc 154515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 65; Significance: 4e-28; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 610 - 766
Target Start/End: Complemental strand, 7225 - 7070
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaag 709  Q
    |||||||||| || |||| ||| ||||||||||   |||||||||||||||||    | ||||||| |||||||| |||||||| |||||||||||||||    
T  7225 agacgattttcagaattgtcgattgaccccacaggccaacacgagtcttttcaccttg-tttgtccccactcacatgcttttcgggaaactttccaaaag 7127  T
Q  710 gtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatgg 766  Q
    ||||||||| | ||||||| |||| |||||  | |||||||||||||||||||||||    
T  7126 gtcacccataccaaaattgctccaagtcaagcatgcttaactgtggagttcttatgg 7070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 64; Significance: 2e-27; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 632 - 771
Target Start/End: Original strand, 14586 - 14725
Alignment:
Q  632 ctgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattgttc 731  Q
    ||||||||||||| ||||||||||||||||||   ||||||||| ||||| ||| |||  || ||||||| ||   ||||||||||||| ||||||| ||    
T  14586 ctgaccccacaaaccaacacgagtcttttcagcatgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcacccatcccaaaattgctc 14685  T
Q  732 cacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    || |||||  ||||||||||||||||||||||||||||||    
T  14686 caagtcaagcacgcttaactgtggagttcttatggaatga 14725  T

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Target: scaffold0040 (Bit Score: 62; Significance: 3e-26; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 624 - 769
Target Start/End: Original strand, 2086 - 2231
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||| |||||||||||||||| ||||||||||||||||| || ||||||||| ||||| |||||||  ||  |||||| ||   ||||||||||||| ||    
T  2086 attgtcgactgaccccacaaaccaacacgagtcttttcaatgtgttttgtcctcactcgcacgcttaccggaaaacttcccggtaggtcacccatcccaa 2185  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaat 769  Q
    ||||| |||| |||||  |||||||||| | |||||||||||||||    
T  2186 aattgctccaagtcaagcacgcttaactattgagttcttatggaat 2231  T

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Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 831 - 884
Target Start/End: Original strand, 2282 - 2335
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctcaggat 884  Q
    |||||||||| ||| ||||||||||| |||| ||||||||||||| || |||||    
T  2282 ttcttataagccttccttcaaccatgtagtcccatacctgcacggccttaggat 2335  T

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Target: scaffold0024 (Bit Score: 60; Significance: 4e-25; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 624 - 771
Target Start/End: Complemental strand, 105990 - 105843
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    ||||||||||||||| | ||| |||||||||||||||||| | ||||||||| ||||| |||||||  |  |||||||  |   ||||||| ||||| ||    
T  105990 attgccgactgaccctataaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccaggaaacttctcggtaggtcacacatcccaa 105891  T
Q  724 aattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||| |||| |||||  ||||||||||||||||||||||||||||||    
T  105890 aattgctccaagtcaagcacgcttaactgtggagttcttatggaatga 105843  T

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Target: scaffold1519 (Bit Score: 53; Significance: 6e-21; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 629 - 753
Target Start/End: Original strand, 1582 - 1706
Alignment:
Q  629 cgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaaaattg 728  Q
    |||||||||||||||| ||||||||||||||| || | ||||||||| |||||||| ||||  || ||||||| ||   ||||||||||||| |||||||    
T  1582 cgactgaccccacaaaccaacacgagtctttttagcgtgttttgtcctcactcacatgcttaccgggaaacttcccggtaggtcacccatcccaaaattg 1681  T
Q  729 ttccacgtcaaatacgcttaactgt 753  Q
     |||| |||||  ||||||||||||    
T  1682 ctccaagtcaagcacgcttaactgt 1706  T

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Target: scaffold0333 (Bit Score: 51; Significance: 9e-20; HSPs: 3)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 610 - 771
Target Start/End: Complemental strand, 5304 - 5144
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttcca-aaa 708  Q
    |||||| |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || |||| ||||||   |    
T  5304 agacgactttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaa-tttccaggta 5206  T
Q  709 ggtcacccatcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatga 771  Q
    ||||||||||||  |||||| |||| || ||  |||||||||||||||||||||||| |||||    
T  5205 ggtcacccatcc-caaattgctccaagttaagcacgcttaactgtggagttcttatgaaatga 5144  T

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Target: scaffold0333; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 617 - 806
Target Start/End: Complemental strand, 4837 - 4650
Alignment:
Q  617 tttaagtattgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcaccc 716  Q
    |||||| |||| |||||||||| ||||| |||||||||||||||||| | ||||||||| ||||| ||| |||  || ||||||| ||   |||||||||    
T  4837 tttaagcattgtcgactgaccctacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacacttaccgggaaacttcccggtaggtcaccc 4738  T
Q  717 atcctaaaattgttccacgtcaaatacgcttaactgtggagttcttatggaatgaactatnnnnnnngaagatgcatcttgttgatatag 806  Q
    ||||  |||||| |||| || ||  || ||||||||||||||||||||  ||||| |||        |||||||||||||||||||||||    
T  4737 atcc-caaattgctccaagttaagcacacttaactgtggagttcttataaaatgagcta-ccgaaaagaagatgcatcttgttgatatag 4650  T

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Target: scaffold0333; HSP #3
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 609 - 663
Target Start/End: Complemental strand, 5408 - 5354
Alignment:
Q  609 tagacgattttaagtattgccgactgaccccacaaatcaacacgagtcttttcag 663  Q
    ||||||| |||||| |||| ||||| |||| ||||| ||||||||||||||||||    
T  5408 tagacgactttaagcattgtcgacttaccctacaaaccaacacgagtcttttcag 5354  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 624 - 725
Target Start/End: Complemental strand, 26338 - 26237
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgcttttcgagaaactttccaaaaggtcacccatcctaa 723  Q
    |||||||| ||| || |||||||||||||||||||||||| | ||| ||| | | ||| || |||||||||||||||||| | ||| |||| ||||||||    
T  26338 attgccgattgatcctacaaatcaacacgagtcttttcagcgtgttatgttctccctcgcaagcttttcgagaaactttctataagctcactcatcctaa 26239  T
Q  724 aa 725  Q
    ||    
T  26238 aa 26237  T

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Target: scaffold0088 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 831 - 880
Target Start/End: Complemental strand, 23747 - 23698
Alignment:
Q  831 ttcttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||| ||| |||||||||||||||| ||||||||||||| ||||    
T  23747 ttcttataagccttccttcaaccatgcagtcccatacctgcacggcctca 23698  T

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Target: scaffold0065 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 624 - 663
Target Start/End: Original strand, 62983 - 63022
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcag 663  Q
    ||||||||||||||||||||| ||| ||||||||||||||    
T  62983 attgccgactgaccccacaaaccaatacgagtcttttcag 63022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1126 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold1126
Description:

Target: scaffold1126; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 834 - 880
Target Start/End: Original strand, 991 - 1037
Alignment:
Q  834 ttataagtctttcttcaaccatgcagtctcatacctgcacggtctca 880  Q
    |||||||||||  |||||||||||||||||||| |||||| ||||||    
T  991 ttataagtcttctttcaaccatgcagtctcatatctgcactgtctca 1037  T

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Target: scaffold0071 (Bit Score: 31; Significance: 0.00000008; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 610 - 652
Target Start/End: Original strand, 45038 - 45080
Alignment:
Q  610 agacgattttaagtattgccgactgaccccacaaatcaacacg 652  Q
    |||||| ||||| ||||||| ||||||||||||||||||||||    
T  45038 agacgactttaattattgccaactgaccccacaaatcaacacg 45080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0557 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 624 - 689
Target Start/End: Complemental strand, 2366 - 2301
Alignment:
Q  624 attgccgactgaccccacaaatcaacacgagtcttttcagtgagttttgtccacactcacacgctt 689  Q
    |||| ||||||| || ||||| |||||||||||||||||| | ||||| ||| ||||| |||||||    
T  2366 attgtcgactgatcctacaaaccaacacgagtcttttcagcgtgttttctcctcactcgcacgctt 2301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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