View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5753_high_7 (Length: 225)
Name: NF5753_high_7
Description: NF5753
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5753_high_7 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 50574659 - 50574876
Alignment:
| Q |
1 |
gactctgtctttttaccatctgattcgtatgtgattaggttcctatatatataatacaatagtgcccaacaatccaattcataaacactcgttaacatta |
100 |
Q |
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| T |
50574659 |
gactctgtcttttaaccatctgatacgtatgtgattaggttcctatatatataatacaatagtgcccaacaatccaattcataaacactcgttaacatta |
50574758 |
T |
|
| Q |
101 |
atatcactaggaatagttactgtcccctaaaaaatggctatgaagttagcaatattattgtgtttggtgatactcaacctcacttcagcatttgcagcca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
50574759 |
atatcactaggaatagttactgtcccctaaaaaatggctatgaagttagcaatattattgtgtttggtgatactcaacctcacttcagcatttgcagcca |
50574858 |
T |
|
| Q |
201 |
gagtgaatgatgcctatg |
218 |
Q |
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|||||||||||||||||| |
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| T |
50574859 |
gagtgaatgatgcctatg |
50574876 |
T |
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