View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5757-Insertion-14 (Length: 181)
Name: NF5757-Insertion-14
Description: NF5757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5757-Insertion-14 |
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Alignment Details
Target: chr4 (Bit Score: 166; Significance: 4e-89; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 166; E-Value: 4e-89
Query Start/End: Original strand, 11 - 176
Target Start/End: Complemental strand, 45793757 - 45793592
Alignment:
| Q |
11 |
tcgtcatctggaaagaccatagacattgtaagcaaatatcgacacatcaaagcttgaattcagtcatgaagaaatgaatcactcagagcacataatatac |
110 |
Q |
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| T |
45793757 |
tcgtcatctggaaagaccatagacattgtaagcaaatatcgacacatcaaagcttgaattcagtcatgaagaaatgaatcactcagagcacataatatac |
45793658 |
T |
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| Q |
111 |
tatactcctaaattctaaattatatccccaaacgcataccaatagtcagttaatataccaaccaaa |
176 |
Q |
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| T |
45793657 |
tatactcctaaattctaaattatatccccaaacgcataccaatagtcagttaatataccaaccaaa |
45793592 |
T |
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