View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5757_low_18 (Length: 202)
Name: NF5757_low_18
Description: NF5757
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5757_low_18 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 10 - 202
Target Start/End: Complemental strand, 32195328 - 32195136
Alignment:
| Q |
10 |
aagaatataaaagaaaaagaagacatgtggccactgaatctcaaacttagagactagtataatcacagtttaaataaagggctgcgatctggacctcgac |
109 |
Q |
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| T |
32195328 |
aagaaaataaaagaaaaagaagacatgtggccactgaatctcaaacttagagactagtataatcacagtttaaataaagggctgtgatctggacctcgac |
32195229 |
T |
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| Q |
110 |
ataatggtttttgatgttacaaaaaccaaacttggccgcaatttaggccacatttgaccgcagttctccacaatatcaaagacttcaacgtga |
202 |
Q |
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| T |
32195228 |
ataatggtttttgatgttacaaaaaccaaacttggccgcaatttagaccacatttgaccgcggttctccacaatatcaaagacttcaacgtga |
32195136 |
T |
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