View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5758-Insertion-3 (Length: 160)
Name: NF5758-Insertion-3
Description: NF5758
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5758-Insertion-3 |
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Alignment Details
Target: chr3 (Bit Score: 104; Significance: 4e-52; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 53911240 - 53911100
Alignment:
| Q |
8 |
tgtatgtcaatctccacaggggtagaagttgtagttacagtatggtgatcttttacgaagctgtaatttggcatgtagtggatagttttctcagattggt |
107 |
Q |
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| T |
53911240 |
tgtatgtcaatctccacaagggtagaagttgtagttacagtatggtgatcttttacgaagctgtaatttggtatgtagtggatagttttctcaaattggt |
53911141 |
T |
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| Q |
108 |
tattctggnnnnnnngacagatgattccttgtcatccagag |
148 |
Q |
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| T |
53911140 |
tattctggtttttttgacagatgattccttgtcttccagag |
53911100 |
T |
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