View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5759_low_35 (Length: 255)

Name: NF5759_low_35
Description: NF5759
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5759_low_35
NF5759_low_35
[»] chr1 (55 HSPs)
chr1 (1-247)||(37055719-37055964)
chr1 (149-223)||(41877480-41877554)
chr1 (157-245)||(17754263-17754352)
chr1 (136-247)||(6612168-6612280)
chr1 (152-218)||(27471579-27471645)
chr1 (149-225)||(14359532-14359607)
chr1 (149-225)||(48450597-48450673)
chr1 (154-225)||(398780-398851)
chr1 (154-225)||(5898281-5898352)
chr1 (154-229)||(34257925-34258000)
chr1 (136-225)||(15323136-15323225)
chr1 (156-225)||(20157367-20157436)
chr1 (149-218)||(46348393-46348462)
chr1 (136-212)||(9629897-9629973)
chr1 (154-218)||(36878441-36878505)
chr1 (147-218)||(18556464-18556535)
chr1 (149-224)||(21378552-21378627)
chr1 (149-192)||(22515897-22515940)
chr1 (149-212)||(22881626-22881689)
chr1 (149-212)||(31672905-31672968)
chr1 (149-191)||(18190118-18190160)
chr1 (149-211)||(38078671-38078733)
chr1 (154-224)||(38503294-38503364)
chr1 (136-225)||(5376497-5376586)
chr1 (154-223)||(34298411-34298480)
chr1 (131-192)||(34712375-34712436)
chr1 (136-229)||(5944250-5944345)
chr1 (149-192)||(113305-113348)
chr1 (160-195)||(2851024-2851059)
chr1 (158-217)||(2896140-2896199)
chr1 (149-212)||(3490400-3490463)
chr1 (136-191)||(6332678-6332732)
chr1 (136-235)||(7918208-7918307)
chr1 (136-191)||(24577183-24577238)
chr1 (149-192)||(31015049-31015092)
chr1 (90-172)||(2218265-2218347)
chr1 (143-225)||(5927344-5927426)
chr1 (160-222)||(16812519-16812581)
chr1 (154-196)||(23804430-23804472)
chr1 (135-229)||(25272451-25272545)
chr1 (149-191)||(32461473-32461515)
chr1 (131-192)||(1486701-1486762)
chr1 (154-227)||(8842729-8842802)
chr1 (154-191)||(14332657-14332694)
chr1 (156-197)||(21038084-21038125)
chr1 (149-190)||(40258943-40258984)
chr1 (165-229)||(609484-609548)
chr1 (136-212)||(1704989-1705065)
chr1 (155-191)||(9828051-9828087)
chr1 (157-229)||(15641048-15641120)
chr1 (151-235)||(16297295-16297379)
chr1 (154-218)||(16927200-16927264)
chr1 (156-212)||(17831548-17831604)
chr1 (149-189)||(18337338-18337378)
chr1 (155-195)||(39953162-39953202)
[»] chr6 (49 HSPs)
chr6 (131-225)||(12696297-12696391)
chr6 (154-222)||(10888989-10889057)
chr6 (151-218)||(25038083-25038150)
chr6 (149-218)||(17841599-17841668)
chr6 (154-218)||(1532218-1532284)
chr6 (154-223)||(7086770-7086839)
chr6 (154-223)||(8805587-8805656)
chr6 (136-225)||(16766670-16766759)
chr6 (149-209)||(7977840-7977900)
chr6 (154-218)||(13851716-13851780)
chr6 (149-225)||(16833281-16833357)
chr6 (136-212)||(18252748-18252824)
chr6 (154-229)||(7625091-7625166)
chr6 (136-195)||(21395305-21395363)
chr6 (154-225)||(30866159-30866230)
chr6 (136-191)||(31384927-31384982)
chr6 (131-229)||(3398588-3398685)
chr6 (144-210)||(17341669-17341735)
chr6 (155-247)||(5000642-5000735)
chr6 (136-225)||(9107367-9107456)
chr6 (154-223)||(9658854-9658923)
chr6 (149-218)||(17435179-17435248)
chr6 (155-200)||(24614408-24614453)
chr6 (152-217)||(25096404-25096469)
chr6 (149-225)||(426524-426600)
chr6 (149-225)||(7938089-7938165)
chr6 (149-225)||(8776983-8777059)
chr6 (156-212)||(10842518-10842574)
chr6 (149-225)||(31959132-31959208)
chr6 (155-223)||(34447374-34447442)
chr6 (149-225)||(34595107-34595183)
chr6 (154-225)||(9027151-9027222)
chr6 (154-205)||(9195769-9195820)
chr6 (136-191)||(10770671-10770726)
chr6 (156-227)||(17168480-17168551)
chr6 (154-209)||(19040341-19040396)
chr6 (156-191)||(26178698-26178733)
chr6 (149-192)||(28715301-28715344)
chr6 (154-212)||(5732525-5732583)
chr6 (149-191)||(6898291-6898333)
chr6 (154-212)||(7265608-7265666)
chr6 (154-212)||(13689507-13689565)
chr6 (149-190)||(403874-403915)
chr6 (151-212)||(5970120-5970181)
chr6 (149-190)||(6327528-6327569)
chr6 (149-218)||(28152079-28152147)
chr6 (154-190)||(7569183-7569219)
chr6 (149-217)||(15489742-15489810)
chr6 (154-218)||(16388248-16388311)
[»] chr8 (37 HSPs)
chr8 (138-230)||(8343284-8343376)
chr8 (143-229)||(4673429-4673515)
chr8 (149-225)||(24669406-24669482)
chr8 (149-195)||(7442848-7442894)
chr8 (143-225)||(22197746-22197828)
chr8 (156-217)||(13018262-13018323)
chr8 (136-224)||(2572053-2572141)
chr8 (149-225)||(20873042-20873118)
chr8 (136-225)||(25566822-25566903)
chr8 (149-229)||(28642377-28642457)
chr8 (149-192)||(8342978-8343021)
chr8 (149-235)||(29510314-29510400)
chr8 (154-212)||(34897071-34897129)
chr8 (154-212)||(39954294-39954352)
chr8 (136-225)||(22651949-22652038)
chr8 (149-210)||(24613509-24613569)
chr8 (149-225)||(4298896-4298972)
chr8 (136-212)||(15816126-15816202)
chr8 (154-218)||(24362217-24362281)
chr8 (136-235)||(13436961-13437060)
chr8 (154-204)||(4611528-4611578)
chr8 (149-191)||(4948659-4948701)
chr8 (154-192)||(14731718-14731756)
chr8 (149-215)||(20679405-20679471)
chr8 (149-211)||(22595981-22596043)
chr8 (154-192)||(25172713-25172751)
chr8 (154-191)||(7658470-7658507)
chr8 (136-229)||(10497813-10497906)
chr8 (154-191)||(13203648-13203685)
chr8 (149-218)||(36450764-36450833)
chr8 (154-190)||(11927101-11927137)
chr8 (149-229)||(25192357-25192437)
chr8 (160-212)||(27101501-27101553)
chr8 (136-212)||(30271288-30271364)
chr8 (149-225)||(31556970-31557045)
chr8 (154-218)||(36934650-36934714)
chr8 (149-189)||(40332200-40332240)
[»] chr4 (33 HSPs)
chr4 (136-212)||(30838196-30838272)
chr4 (149-225)||(847924-848000)
chr4 (149-225)||(21945476-21945552)
chr4 (149-212)||(2361985-2362048)
chr4 (138-229)||(31800477-31800568)
chr4 (138-212)||(903908-903982)
chr4 (154-231)||(44081592-44081669)
chr4 (136-212)||(4383354-4383429)
chr4 (149-225)||(40481610-40481685)
chr4 (136-192)||(51701264-51701320)
chr4 (149-192)||(37203270-37203313)
chr4 (131-217)||(3947758-3947844)
chr4 (165-223)||(20521875-20521933)
chr4 (154-212)||(22440615-22440673)
chr4 (149-190)||(6485621-6485662)
chr4 (149-225)||(23292996-23293072)
chr4 (136-212)||(27706174-27706250)
chr4 (149-192)||(11596362-11596405)
chr4 (149-224)||(14126121-14126196)
chr4 (149-192)||(28964258-28964301)
chr4 (149-192)||(29205450-29205493)
chr4 (154-220)||(13783259-13783325)
chr4 (149-223)||(19482643-19482717)
chr4 (149-218)||(30298926-30298996)
chr4 (149-218)||(30327794-30327864)
chr4 (165-218)||(34200297-34200348)
chr4 (154-195)||(8423733-8423774)
chr4 (149-212)||(20633471-20633531)
chr4 (163-224)||(43240995-43241056)
chr4 (134-190)||(16303261-16303317)
chr4 (154-190)||(24343515-24343551)
chr4 (136-192)||(35952614-35952670)
chr4 (154-222)||(40179651-40179719)
[»] chr7 (45 HSPs)
chr7 (154-229)||(5235955-5236030)
chr7 (136-225)||(27945014-27945103)
chr7 (149-229)||(11061086-11061166)
chr7 (151-229)||(6028594-6028672)
chr7 (154-218)||(7328706-7328770)
chr7 (149-229)||(13770660-13770740)
chr7 (154-225)||(15902795-15902866)
chr7 (169-226)||(4793835-4793892)
chr7 (149-214)||(9408344-9408409)
chr7 (154-223)||(26733279-26733348)
chr7 (155-223)||(598183-598251)
chr7 (154-214)||(5233613-5233673)
chr7 (154-206)||(17851423-17851475)
chr7 (154-218)||(20549771-20549835)
chr7 (149-193)||(21880157-21880201)
chr7 (149-225)||(24105651-24105727)
chr7 (147-206)||(11831424-11831483)
chr7 (136-218)||(10042917-10042999)
chr7 (149-195)||(28155573-28155619)
chr7 (131-212)||(5409828-5409909)
chr7 (146-191)||(5954254-5954299)
chr7 (154-195)||(8160419-8160460)
chr7 (136-189)||(12843172-12843225)
chr7 (136-225)||(24339615-24339704)
chr7 (155-212)||(32308106-32308163)
chr7 (154-218)||(22484005-22484069)
chr7 (149-229)||(25481871-25481951)
chr7 (136-192)||(26033458-26033514)
chr7 (152-192)||(30813818-30813858)
chr7 (97-192)||(18215144-18215239)
chr7 (149-229)||(21864775-21864857)
chr7 (146-212)||(1401011-1401077)
chr7 (154-212)||(42720905-42720963)
chr7 (140-217)||(22868023-22868100)
chr7 (143-212)||(23191882-23191951)
chr7 (154-195)||(27093428-27093469)
chr7 (154-195)||(27184832-27184873)
chr7 (136-189)||(27229308-27229360)
chr7 (154-195)||(29787384-29787425)
chr7 (154-222)||(3938119-3938187)
chr7 (155-235)||(4008580-4008660)
chr7 (155-235)||(4013972-4014052)
chr7 (165-225)||(11722124-11722184)
chr7 (136-224)||(43027466-43027554)
chr7 (149-225)||(43249966-43250042)
[»] scaffold1528 (1 HSPs)
scaffold1528 (157-245)||(987-1076)
[»] scaffold0004 (1 HSPs)
scaffold0004 (143-212)||(92793-92862)
[»] chr2 (36 HSPs)
chr2 (149-218)||(39323244-39323313)
chr2 (149-224)||(20539684-20539759)
chr2 (154-225)||(23717999-23718070)
chr2 (154-225)||(24105671-24105742)
chr2 (149-217)||(4882706-4882774)
chr2 (149-225)||(30404860-30404936)
chr2 (136-231)||(36756341-36756436)
chr2 (143-212)||(21091709-21091778)
chr2 (149-218)||(21374709-21374778)
chr2 (154-215)||(23921236-23921297)
chr2 (140-218)||(6940235-6940313)
chr2 (149-191)||(18841023-18841065)
chr2 (154-224)||(21782833-21782903)
chr2 (154-212)||(31808063-31808121)
chr2 (154-223)||(21616737-21616806)
chr2 (154-223)||(28412325-28412394)
chr2 (149-218)||(30717540-30717609)
chr2 (149-206)||(42832286-42832343)
chr2 (154-214)||(15909647-15909707)
chr2 (151-191)||(30335424-30335464)
chr2 (154-190)||(40361769-40361805)
chr2 (149-223)||(14996233-14996308)
chr2 (136-195)||(31456638-31456697)
chr2 (154-197)||(34691820-34691863)
chr2 (154-197)||(34714232-34714275)
chr2 (149-218)||(21624246-21624316)
chr2 (136-218)||(30527592-30527674)
chr2 (149-190)||(15972881-15972922)
chr2 (154-195)||(28677912-28677953)
chr2 (156-197)||(36281686-36281727)
chr2 (154-195)||(36409642-36409683)
chr2 (149-218)||(37558957-37559026)
chr2 (151-223)||(12940947-12941019)
chr2 (156-212)||(29970566-29970622)
chr2 (149-229)||(33884020-33884100)
chr2 (154-218)||(37411259-37411323)
[»] scaffold0223 (1 HSPs)
scaffold0223 (136-225)||(20145-20234)
[»] chr5 (34 HSPs)
chr5 (144-225)||(6326302-6326383)
chr5 (149-218)||(14674249-14674318)
chr5 (149-218)||(43001780-43001849)
chr5 (154-218)||(5467993-5468057)
chr5 (154-218)||(27144443-27144507)
chr5 (154-225)||(22013387-22013458)
chr5 (154-224)||(12927628-12927698)
chr5 (154-195)||(36838546-36838587)
chr5 (149-225)||(21191066-21191142)
chr5 (159-227)||(23220954-23221022)
chr5 (151-195)||(27932238-27932282)
chr5 (136-212)||(39698527-39698603)
chr5 (164-218)||(7175044-7175098)
chr5 (151-225)||(21522723-21522797)
chr5 (151-225)||(21533289-21533363)
chr5 (151-217)||(41633716-41633782)
chr5 (152-218)||(42488066-42488132)
chr5 (136-225)||(13287396-13287485)
chr5 (155-212)||(19438329-19438386)
chr5 (136-217)||(19579682-19579763)
chr5 (156-225)||(26205777-26205846)
chr5 (149-192)||(21576755-21576798)
chr5 (139-190)||(24906301-24906352)
chr5 (149-212)||(31084309-31084372)
chr5 (149-212)||(42893346-42893409)
chr5 (149-191)||(6247629-6247671)
chr5 (156-218)||(19168838-19168900)
chr5 (149-191)||(33178032-33178074)
chr5 (149-225)||(14422877-14422951)
chr5 (156-229)||(15410465-15410538)
chr5 (166-247)||(17122999-17123080)
chr5 (154-191)||(35017044-35017081)
chr5 (154-222)||(16203810-16203878)
chr5 (160-228)||(26609323-26609391)
[»] scaffold0722 (1 HSPs)
scaffold0722 (149-212)||(7042-7105)
[»] chr3 (40 HSPs)
chr3 (154-225)||(11665917-11665988)
chr3 (136-235)||(14829653-14829751)
chr3 (154-225)||(25064882-25064953)
chr3 (149-218)||(4990977-4991046)
chr3 (143-212)||(10268490-10268559)
chr3 (149-225)||(8587031-8587107)
chr3 (149-192)||(1509545-1509588)
chr3 (154-229)||(16192765-16192840)
chr3 (149-211)||(4987301-4987363)
chr3 (149-231)||(34307790-34307872)
chr3 (149-191)||(55401082-55401124)
chr3 (149-190)||(17568693-17568734)
chr3 (149-218)||(25948897-25948966)
chr3 (154-195)||(49505169-49505210)
chr3 (149-225)||(26508083-26508159)
chr3 (149-225)||(28917974-28918050)
chr3 (149-224)||(8383231-8383306)
chr3 (136-191)||(14209120-14209175)
chr3 (150-212)||(14747547-14747610)
chr3 (136-199)||(14832098-14832161)
chr3 (165-212)||(15544679-15544726)
chr3 (137-192)||(21256984-21257039)
chr3 (146-225)||(26492212-26492291)
chr3 (154-192)||(11313815-11313853)
chr3 (154-192)||(27277853-27277891)
chr3 (154-212)||(29508430-29508488)
chr3 (154-195)||(7928453-7928494)
chr3 (154-195)||(8039850-8039891)
chr3 (155-224)||(9800014-9800083)
chr3 (149-218)||(16000026-16000095)
chr3 (154-195)||(32804555-32804596)
chr3 (150-191)||(34910324-34910365)
chr3 (131-192)||(49651778-49651839)
chr3 (157-225)||(3164043-3164111)
chr3 (165-225)||(5441057-5441117)
chr3 (149-225)||(10335296-10335372)
chr3 (149-217)||(11610502-11610570)
chr3 (143-191)||(12083910-12083958)
chr3 (149-189)||(20503474-20503514)
chr3 (149-225)||(24205051-24205127)
[»] scaffold0103 (1 HSPs)
scaffold0103 (149-218)||(51791-51860)
[»] scaffold0246 (1 HSPs)
scaffold0246 (149-225)||(19549-19624)
[»] scaffold0053 (1 HSPs)
scaffold0053 (149-225)||(8771-8847)
[»] scaffold0018 (2 HSPs)
scaffold0018 (149-212)||(192259-192322)
scaffold0018 (143-225)||(178822-178905)
[»] scaffold0003 (1 HSPs)
scaffold0003 (154-225)||(241567-241638)
[»] scaffold0086 (1 HSPs)
scaffold0086 (136-178)||(2948-2990)
[»] scaffold0049 (1 HSPs)
scaffold0049 (149-195)||(63776-63822)
[»] scaffold0027 (1 HSPs)
scaffold0027 (151-229)||(46651-46729)
[»] scaffold0011 (1 HSPs)
scaffold0011 (149-191)||(17759-17801)
[»] scaffold0306 (1 HSPs)
scaffold0306 (150-225)||(13373-13448)
[»] scaffold0152 (1 HSPs)
scaffold0152 (150-225)||(21879-21954)
[»] scaffold0136 (1 HSPs)
scaffold0136 (136-223)||(3846-3933)
[»] scaffold0361 (1 HSPs)
scaffold0361 (149-191)||(14537-14579)
[»] scaffold0022 (1 HSPs)
scaffold0022 (154-224)||(90817-90887)
[»] scaffold0020 (1 HSPs)
scaffold0020 (112-218)||(135285-135391)
[»] scaffold0008 (1 HSPs)
scaffold0008 (136-218)||(263369-263451)
[»] scaffold0598 (1 HSPs)
scaffold0598 (157-218)||(8071-8132)
[»] scaffold0085 (1 HSPs)
scaffold0085 (165-218)||(26373-26426)
[»] scaffold0066 (1 HSPs)
scaffold0066 (151-192)||(33375-33416)
[»] scaffold0050 (1 HSPs)
scaffold0050 (149-217)||(70259-70327)


Alignment Details
Target: chr1 (Bit Score: 178; Significance: 4e-96; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 37055719 - 37055964
Alignment:
Q  1 ttctctctttacactttgacttaattcttttgtcttgtatgcnnnnnnnnatcatgaatgtatttgtcagaaaagttatgcaatataagctatgatgcac 100  Q
    |||| |||||||||||||||||||||||||||||||||||||        |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37055719 ttctttctttacactttgacttaattcttttgtcttgtatgcttttttt-atcatgtatgtatttgtcagaaaagttatgcaatataagctatgatgcac 37055817  T
Q  101 ggccactccgtagattaggcgtgttcaggcgtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcga 200  Q
    |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||    
T  37055818 ggccactccgtagattaggcgtgtccaggtgtcacacacgatactgatacttgtaattacactaaattatgtaattttctcaaattattagcagtatcga 37055917  T
Q  201 tgtgtcagtgtctgtgtcatgtccgatgttcatgttgtatctgtgct 247  Q
    ||| ||||||||||||||||||||||||||| ||||||||| |||||    
T  37055918 tgtatcagtgtctgtgtcatgtccgatgttcgtgttgtatccgtgct 37055964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 41877480 - 41877554
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||  ||  ||||||||||||| ||||    
T  41877480 acttgtaattacactaaattatgtaattttctcaaattattagcggtgtcggcgtaccagtgtctgtgtcgtgtc 41877554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 17754352 - 17754263
Alignment:
Q  157 ttacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatg-ttgtatctgtg 245  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| |||||||| ||||||||| | | || |||||||| |||||||||||    
T  17754352 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgttcatgtttgtatctgtg 17754263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 6612168 - 6612280
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    |||||| || || ||||||||||||||| |||||||||||||| ||||||||||| | ||||||  |||||| |||| ||||| |||||| ||||| |||    
T  6612168 acacgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtcattgtccgtgtcgtgtccggtgttcgtgt 6612267  T
Q  236 -tgtatctgtgct 247  Q
      |||||||||||    
T  6612268 ccgtatctgtgct 6612280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 27471579 - 27471645
Alignment:
Q  152 tgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||||| ||||||||  |||| |||||||||||||||||||| ||||||||||| ||||||    
T  27471579 tgtaattacactgaattatgtgcttttctcaaattattagcggtatcggtgtgtcagtgtttgtgtc 27471645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 14359532 - 14359607
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| || |||  ||||| ||||||||||| ||||||    
T  14359532 acttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtccgtgtctgtgtcgtgtccg 14359607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 48450597 - 48450673
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| || | |  ||||||||||| ||||| ||||||    
T  48450597 acttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtgtccgtgtcgtgtccg 48450673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 398780 - 398851
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 398851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 5898281 - 5898352
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||| |||||||| ||||| ||| |||||||||||| |||  || |||||||||||||||||||||    
T  5898281 taattacactgaattatgtgattttttcagattattagcggtgtcggcgtctcagtgtctgtgtcatgtccg 5898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 34257925 - 34258000
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||||||| ||||||| ||||||||| |||| |||| |||||| | || || |||||||||||||    
T  34257925 taattacactaaattatgtgattttattaaattattaacggtgtcgacgtgtcaatatccgtatcatgtccgatgt 34258000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 15323225 - 15323136
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||| || ||||  |||||||||||||||||| ||||| ||||||||||| | |||||||  ||||||||||  |||| ||||||    
T  15323225 acacgatacagacacttacaattacactaaattatgtgattttttcaaattattaactgtatcgacatgtcagtgtccatgtcgtgtccg 15323136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 20157367 - 20157436
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||| |||||||| ||||| ||| |||||||||||| |||||||||||||| | ||||| ||||||    
T  20157367 attacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtcgtgtccg 20157436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 46348393 - 46348462
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| || |||  ||||||||||| |||||    
T  46348393 acttgtaattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 46348462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 9629897 - 9629973
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| || || |||| |||| ||||| |||||| | |||||||||||||||||||||| |||||||||| |||||    
T  9629897 acacgacaccgacacttataatcacactgaattatatgattttatcaaattattagcggtgtcgatgtgtcggtgtc 9629973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 36878505 - 36878441
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||  |||||||||||| ||||    
T  36878505 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtc 36878441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 18556464 - 18556535
Alignment:
Q  147 atacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||| || || ||||||||||||| || |||  ||||||||||| |||||    
T  18556464 atacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 18556535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 21378627 - 21378552
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    ||||||||||||||| |||||||||||||| |||| |||||||| || ||| ||||||  |||| ||||| |||||    
T  21378627 acttgtaattacactgaattatgtaattttttcaatttattagctgtgtcggtgtgtccatgtccgtgtcgtgtcc 21378552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 22515897 - 22515940
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  22515897 acttgtaattacactaaattatgtgattttttcaaattattagc 22515940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 22881626 - 22881689
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||||||||||||||||| ||||| ||||||||||||  || |||  |||||||||||    
T  22881626 acttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 22881689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 31672905 - 31672968
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||| ||||| || ||||| ||||||||||||| || ||| ||||||||||||    
T  31672905 acttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtgtc 31672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 18190118 - 18190160
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  18190118 acttgtaattacactgaattatgtaattttttcaaattattag 18190160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 38078671 - 38078733
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgt 211  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||| || |||| ||||||||||    
T  38078671 acttgtaattacattgaattatgtgattttttcaaattattagctgtgtcgacgtgtcagtgt 38078733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 38503364 - 38503294
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||||||| || ||| | ||||| |||||||||||||||| ||| ||||| |||||| |||||||||||    
T  38503364 taattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtcatgtcc 38503294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 5376497 - 5376586
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || |||| |||||||||| |||||||| ||||| | |||||||||||||| |||  |||| |||||| ||||| ||||||    
T  5376497 acacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtcgtgtccg 5376586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 34298480 - 34298411
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||| |||||||| ||||| |||||||||||| ||| ||| ||||||||| || ||||| ||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagtttccgtgtcgtgtc 34298411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 34712375 - 34712436
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||| |||||| ||||| || | ||||||||||||||||||| ||||| |||||||||||||    
T  34712375 gtccgacacgacactgacacatataattacactaaattatgttattttctcaaattattagc 34712436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 229
Target Start/End: Complemental strand, 5944345 - 5944250
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttat--caaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||| || || |||| |||||||||| |||||||| ||||| |  |||||||||||| ||  ||  ||||||||||||||||| ||||||||||    
T  5944345 acacgacaccgacacttataattacactgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtgtctgtgtcgtgtccgatgt 5944250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 113348 - 113305
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  113348 acttgtaattacactgaattatgtgattttttcaaattattagc 113305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 160 - 195
Target Start/End: Complemental strand, 2851059 - 2851024
Alignment:
Q  160 cactaaattatgtaattttatcaaattattagcggt 195  Q
    |||| |||||||||||||||||||||||||||||||    
T  2851059 cactgaattatgtaattttatcaaattattagcggt 2851024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 158 - 217
Target Start/End: Original strand, 2896140 - 2896199
Alignment:
Q  158 tacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||||| |||||||| ||||| |||||||||||||||| |||  ||||||||||| ||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 3490400 - 3490463
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||| ||| ||||| |||| ||||||||||||| || |||  |||||||||||    
T  3490400 acttgtaattacactgaataatgtagttttctcaaattattagcagtgtcggcgtgtcagtgtc 3490463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 6332732 - 6332678
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||| || |||||||||||||||||| |||||||| ||||| ||||||||||||    
T  6332732 acacgacaccgatacttgtaattacactgaattatgtgatttt-tcaaattattag 6332678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 7918208 - 7918307
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    |||||| ||||| || | |||||||||| |||||||| ||||| |||||||||||| | | ||   |||||| |||||||||| |||||| ||| |||||    
T  7918208 acacgacactgacacatataattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtcattgtctgtgtcgtgtccggtgtccatgt 7918307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 24577183 - 24577238
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||| || || ||||||||||||||| |||||||| ||||| ||||||||||||    
T  24577183 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 24577238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 31015092 - 31015049
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  31015092 acttgtaattacactgaattatgtgattttctcaaattattagc 31015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 90 - 172
Target Start/End: Complemental strand, 2218347 - 2218265
Alignment:
Q  90 ctatgatgcacggccactccgtagattaggcgtgttcaggcgtcccacacgatactgatacttgtaattacactaaattatgt 172  Q
    |||||| |||||| ||||||  ||||||||||||| |  | |||  |||||| || || ||||||||||||||||||||||||    
T  2218347 ctatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacacgacaccgacacttgtaattacactaaattatgt 2218265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 5927344 - 5927426
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||| ||||||||||||| |||||||| | ||||| ||||||||||||| || |    ||||||||||| ||||| ||||||    
T  5927344 actgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtgtccgtgtcgtgtccg 5927426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 222
Target Start/End: Complemental strand, 16812581 - 16812519
Alignment:
Q  160 cactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgt 222  Q
    |||| |||||||| ||||| |||||||||||  ||| ||| |||||||||||| |||||||||    
T  16812581 cactgaattatgtgattttgtcaaattattattggtgtcggtgtgtcagtgtccgtgtcatgt 16812519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 196
Target Start/End: Complemental strand, 23804472 - 23804430
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggta 196  Q
    |||||||| |||||||| ||||||||||||||||||| |||||    
T  23804472 taattacattaaattatataattttatcaaattattaacggta 23804430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 229
Target Start/End: Complemental strand, 25272545 - 25272451
Alignment:
Q  135 cacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||| || || |||| ||||||||||||||||||| ||||| ||||||| ||| | || || | ||||| |||| |||||| |||| |||||    
T  25272545 cacacgacaccgacacttataattacactaaattatgtgattttctcaaattgttaactgtgtcaaagtgtctgtgtttgtgtcgtgtctgatgt 25272451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 32461473 - 32461515
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||| |||||||||| ||||| ||||||||||||    
T  32461473 acttgtaattacattaaattatgtgattttttcaaattattag 32461515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 1486701 - 1486762
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||| |||||| || || |||| |||||||||| |||||||| ||||| |||||||||||||    
T  1486701 gtccgacacgacaccgacacttataattacactgaattatgtgattttttcaaattattagc 1486762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 227
Target Start/End: Original strand, 8842729 - 8842802
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgat 227  Q
    |||||||| |||||||| |  |||| |||||||| ||| |||  ||  ||||||||||||||||||||||||||    
T  8842729 taattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtgtctgtgtcatgtccgat 8842802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Original strand, 14332657 - 14332694
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  14332657 taattacactaaattatgtgattttctcaaattattag 14332694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 21038125 - 21038084
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtat 197  Q
    |||||||| |||||||||||||| | ||||||||||||||||    
T  21038125 attacactgaattatgtaattttcttaaattattagcggtat 21038084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 40258943 - 40258984
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||||||||||| |||||||| ||||| |||||||||||    
T  40258943 acttgtaattacactgaattatgtgattttttcaaattatta 40258984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 229
Target Start/End: Original strand, 609484 - 609548
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||||||||||| |||||||||||| ||| |||  ||||||||||   |||| ||||||||||    
T  609484 aattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgttgatgtcgtgtccgatgt 609548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 1704989 - 1705065
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| || || |||||||||||| || |||||||| ||||| ||||||||||||  || ||| |||||| |||||    
T  1704989 acacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtc 1705065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 191
Target Start/End: Complemental strand, 9828087 - 9828051
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||| |||||||| ||||||||||||||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattag 9828051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 15641048 - 15641120
Alignment:
Q  157 ttacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||| ||| |||| ||||| | ||||||||||| || |||   |||||||||| ||||||||||||||||    
T  15641048 ttacactgaatcatgtgattttcttaaattattagcagtgtcggcatgtcagtgtccgtgtcatgtccgatgt 15641120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 16297295 - 16297379
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    ||||||||||||| |||| ||| ||||| ||| |||||| || || |||| |||||||| || || || |||||||||| |||||    
T  16297295 ttgtaattacactgaattttgtgattttttcatattatttgctgtgtcgacgtgtcagtatccgtatcgtgtccgatgtccatgt 16297379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 16927200 - 16927264
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||| | ||||| |||||||||||||  |  ||| |||||||||||||||||    
T  16927200 taattacactgaattatatgattttttcaaattattagctatgccgacgtgtcagtgtctgtgtc 16927264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 17831548 - 17831604
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||| ||| |||| ||||| |||||||||||||||| |||  |||||||||||    
T  17831548 attacactgaataatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 17831604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 18337378 - 18337338
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatt 189  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  18337378 acttgtaattacactgaattatgtgattttttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 195
Target Start/End: Original strand, 39953162 - 39953202
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||||||||||| ||||| | ||||||||||||||    
T  39953162 aattacactaaattatgtgattttctaaaattattagcggt 39953202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 131 - 225
Target Start/End: Complemental strand, 12696391 - 12696297
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||||| ||||||||||||| || |||  ||||||||||| ||||| ||||||    
T  12696391 gtccgacacgacactgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 12696297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 10888989 - 10889057
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgt 222  Q
    |||| |||||||||||||| |||||||||||||||||||||| || ||||||| ||||| |||||||||    
T  10888989 taatcacactaaattatgtgattttatcaaattattagcggtgtctatgtgtcggtgtccgtgtcatgt 10889057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 151 - 218
Target Start/End: Original strand, 25038083 - 25038150
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||||||||||||||||||||| ||||||||||| |||| || | |||||||| ||||||||    
T  25038083 ttgtaattacactaaattatgtaattttctcaaattattaacggtgtcaacgtgtcagtatctgtgtc 25038150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 17841599 - 17841668
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| || |||  ||||||||||| |||||    
T  17841599 acttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 17841668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 1532284 - 1532218
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcg--gtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||||||||||||||||||||||||||  || |||| |||||||||| ||||||    
T  1532284 taattacactgaattatgtaattttatcaaattattagcggtgtgtcgacgtgtcagtgtttgtgtc 1532218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 7086839 - 7086770
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||  ||| ||||| ||||||||||| ||||    
T  7086839 taattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 7086770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Original strand, 8805587 - 8805656
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||  ||| ||||| ||||||||||| ||||    
T  8805587 taattacactaaattatgtgattttctcaaattattagcagtgccgacgtgtcggtgtctgtgtcgtgtc 8805656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 16766759 - 16766670
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  |||||||||||  |||| ||||||    
T  16766759 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 16766670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 209
Target Start/End: Original strand, 7977840 - 7977900
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagt 209  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| || |||  ||||||||    
T  7977840 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 13851780 - 13851716
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| ||||| || ||||| |||||||||||||||| |||| ||||||||||| |||||    
T  13851780 taattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 16833357 - 16833281
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| || ||||| ||||| ||||||||||||  || |||  ||||||||||||||||| ||||||    
T  16833357 acttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtccg 16833281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 18252748 - 18252824
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||| || || ||||||||||||||||||||| ||||| | ||||||||| ||||||||  ||||| |||||    
T  18252748 acacgataccgacacctgtaattacactaaattatgtcatttttttaaattattatcggtatcggagtgtctgtgtc 18252824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 7625166 - 7625091
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||| |||||||||| | ||||| ||||||||||| | || |||| ||||| ||||||||||| ||||||||||    
T  7625166 taattatactaaattatatcattttctcaaattattatccgtgtcgacgtgtcggtgtctgtgtcgtgtccgatgt 7625091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 21395305 - 21395363
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||| || || |||||||||||||||||||||||| ||||| ||||||||||||||||    
T  21395305 acacgacaccgacacttgtaattacactaaattatgt-attttctcaaattattagcggt 21395363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Original strand, 30866159 - 30866230
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||| | |||||||| ||||| |||||||||||||||| | | |||||| ||||| ||||||||||||    
T  30866159 taattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtcatgtccg 30866230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 31384982 - 31384927
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||||    
T  31384982 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattag 31384927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 229
Target Start/End: Complemental strand, 3398685 - 3398588
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||| |||||| || ||||||| |||||||||| |||||| | ||||| ||||||||||||| || |||  ||||||||||| ||||| ||| ||||||    
T  3398685 gtccaacacgacaccgatacttataattacactgaattatatgatttt-tcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgttcgatgt 3398588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 144 - 210
Target Start/End: Original strand, 17341669 - 17341735
Alignment:
Q  144 ctgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtg 210  Q
    |||| |||| |||||||||| |||||||| ||||||||||||||||| |||| |||  |||||||||    
T  17341669 ctgacacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtg 17341735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 247
Target Start/End: Original strand, 5000642 - 5000735
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt-tgtatctgtgct 247  Q
    ||||| ||| ||| |||| ||||| || ||||||||||||| |||| |||||||| || |||||||||||| ||| | ||| ||||||||||||    
T  5000642 aattatactgaatcatgtgattttctcgaattattagcggtgtcgacgtgtcagtatccgtgtcatgtccggtgtccgtgtatgtatctgtgct 5000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 9107367 - 9107456
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||||||| |||| ||| ||||| ||||||||||||| || |||  |||| |||||| ||||| ||||||    
T  9107367 acacgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtcgtgtccg 9107456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 9658923 - 9658854
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||| |||||||| ||||| | |||||||||||||| |||  ||||||||||| ||||| ||||    
T  9658923 taattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtc 9658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 17435248 - 17435179
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||||||| | |||||||||||  | |||| || |||||||| |||||    
T  17435248 acttgtaattacactgaattatgtaattttttaaaattattagctatgtcgacgtatcagtgtccgtgtc 17435179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 200
Target Start/End: Complemental strand, 24614453 - 24614408
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcga 200  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||    
T  24614453 aattacactaaattatataatttttttaaattattagcggtatcga 24614408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 25096469 - 25096404
Alignment:
Q  152 tgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    ||||||||||||| ||||||| ||||| |||||||||||| ||| |||  ||||| ||||||||||    
T  25096469 tgtaattacactagattatgtgattttctcaaattattagtggtgtcgtcgtgtcggtgtctgtgt 25096404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 426524 - 426600
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||| | |||||||| ||||| ||||||||||| | || |||  ||||||||||| ||||| ||||||    
T  426524 acttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtcgtgtccg 426600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 7938165 - 7938089
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| ||||||||||||||||| | ||||| ||||||||||||| || |||  |||||||||||  |||| ||||||    
T  7938165 acttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcgtgtccg 7938089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 8776983 - 8777059
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||| ||| ||||| ||||||||||||  || |||  ||||||||||| ||||| ||||||    
T  8776983 acttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8777059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 10842574 - 10842518
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||||| ||||| |||||||||||||||| |||  ||||| |||||    
T  10842574 attacactaaattatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtc 10842518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 31959208 - 31959132
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||  ||||||| ||||| ||||||||||||| ||  ||  ||||||||||  ||||||||||||    
T  31959208 acttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtgttcgtgtcatgtccg 31959132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 34447374 - 34447442
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||||||||| | ||||||||||||||||| |||| | |  |||||| ||||||||| |||||    
T  34447374 aattacactaaattatatgattttatcaaattattaacggtgttggcgtgtcattgtctgtgttatgtc 34447442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 34595183 - 34595107
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||  || |||  |||||| |||| ||||| ||||||    
T  34595183 acttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtcattgtccgtgtcgtgtccg 34595107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 9027222 - 9027151
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||  |||||||| ||| | |||||||||||||||| |||  ||||||||||| ||||| ||||||    
T  9027222 taattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 9027151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 205
Target Start/End: Original strand, 9195769 - 9195820
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgt 205  Q
    ||||||||||||||||||| ||||| ||||||||||||  || |||||||||    
T  9195769 taattacactaaattatgtcattttctcaaattattaggagtgtcgatgtgt 9195820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Original strand, 10770671 - 10770726
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||| || || ||||||||||||||| |||||||| ||||| ||||||||||||    
T  10770671 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 10770726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 227
Target Start/End: Original strand, 17168480 - 17168551
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgat 227  Q
    ||||||||||||||| | ||||| ||||||||||| | || | |  |||||||||||| |||||||||||||    
T  17168480 attacactaaattatatcattttctcaaattattatcagtgttggcgtgtcagtgtctatgtcatgtccgat 17168551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 209
Target Start/End: Complemental strand, 19040396 - 19040341
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagt 209  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||  ||||||||    
T  19040396 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 156 - 191
Target Start/End: Original strand, 26178698 - 26178733
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||||| ||||||||||||||||||    
T  26178698 attacactaaattatgtgattttatcaaattattag 26178733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 28715344 - 28715301
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  28715344 acttgtaattacactgaattatgtcattttttcaaattattagc 28715301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 5732525 - 5732583
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| ||||| ||||| ||||||||||| |||| |||  |||||||||||    
T  5732525 taattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtc 5732583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 6898291 - 6898333
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||||||||  ||||||||||||    
T  6898291 acttgtaattacacttaattatgtaatttgttcaaattattag 6898333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 7265608 - 7265666
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||| |||||||| ||||| |||||||||||||||| | |  |||||||||||    
T  7265608 taattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtc 7265666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 13689507 - 13689565
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||| ||||| | | |||||||||||||||||||||| | ||||| ||||||||    
T  13689507 taattacacgaaattgtatgattttatcaaattattagcggtgttgatgtatcagtgtc 13689565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 403874 - 403915
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||| |||||||||||||||| ||||| |||||||||||    
T  403874 acttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 5970120 - 5970181
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| |||||||| ||||| ||||||||||| | || |||| ||||| |||||    
T  5970120 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcgacgtgtccgtgtc 5970181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 6327528 - 6327569
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||||||||||| |||||| ||||||| |||||||||||    
T  6327528 acttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 28152147 - 28152079
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||  | |||  ||||||||||| |||||    
T  28152147 acttgtaattacactgaattatgtgatttt-tcaaattattagctttgtcggcgtgtcagtgtccgtgtc 28152079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 7569183 - 7569219
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattatta 190  Q
    |||||||||| |||||||||||||| |||||||||||    
T  7569183 taattacactgaattatgtaattttctcaaattatta 7569219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 15489742 - 15489810
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    ||||||||||||| | |||| ||||||||| ||||||||||||  || |||| |||| |||||| ||||    
T  15489742 acttgtaattacattgaattgtgtaattttttcaaattattagttgtgtcgacgtgttagtgtccgtgt 15489810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 16388248 - 16388311
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||||| ||||| |||||||||| ||  |||||| ||||||||||| |||||    
T  16388248 taattacactgaattatgtgattttttcaaattatttgct-tatcgacgtgtcagtgtccgtgtc 16388311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 8343376 - 8343284
Alignment:
Q  138 acgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgtt 230  Q
    |||| ||||| |||||||||||||||||||||||| ||||| |||||||||||||  | ||| |||||| ||||| ||||| |||||||||||    
T  8343376 acgacactgacacttgtaattacactaaattatgtgattttttcaaattattagctatgtcggtgtgtcggtgtcagtgtcgtgtccgatgtt 8343284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 143 - 229
Target Start/End: Original strand, 4673429 - 4673515
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||||||||| |||| | | ||||| ||||||||||| | || |||  ||||||||||||||||| ||||||||||    
T  4673429 actgatacttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtgtctgtgtcgtgtccgatgt 4673515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 24669482 - 24669406
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||||||||  ||||||||||| |||| ||   ||||||||||||||||| ||||||    
T  24669482 acttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtgtctgtgtcgtgtccg 24669406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 7442894 - 7442848
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||| |||||||||||||||| ||||||||||||||    
T  7442894 acttgtaattacactgaattatgtaattttatgaaattattagcggt 7442848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 22197746 - 22197828
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||| |||||||||||||||||||||||| | ||| ||||||||||||| || | |  |||| |||||||||||| ||||||    
T  22197746 actgacacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtgtctgtgtcgtgtccg 22197828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Complemental strand, 13018323 - 13018262
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    ||||||||||||||||| ||||| ||||||||||| |||||| || |||| |||||||||||    
T  13018323 attacactaaattatgtgattttgtcaaattattaacggtattgacgtgttagtgtctgtgt 13018262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 2572053 - 2572141
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||| || || |||||||||||||||||||||||| ||||| ||||||||||||  || |||| ||||| || || ||||| |||||    
T  2572053 acacgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtcgacgtgtcggtatccgtgtcgtgtcc 2572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 20873118 - 20873042
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||||||||||| ||||| ||||||||||| |  | |||  ||||||||||| ||||| ||||||    
T  20873118 acttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtgtccgtgtcgtgtccg 20873042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 25566903 - 25566822
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||||||| |||||||| ||||| |||||||||||||        |||||||||||||||||||||||||    
T  25566903 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagc--------tgtgtcagtgtctgtgtcatgtccg 25566822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 28642457 - 28642377
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||| ||||||| |||||||||| ||| ||||||||||| | || || |||||||| |||| ||||| ||||||||||    
T  28642457 acttgtagttacactgaattatgtaaatttttcaaattattaaccgtgtcaatgtgtcattgtccgtgtcgtgtccgatgt 28642377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 8343021 - 8342978
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  8343021 acttgtaattacactaaattatgtgattttttcaaattattagc 8342978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 235
Target Start/End: Original strand, 29510314 - 29510400
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    ||||||||||| ||| |||| ||| ||||| ||||||||||||| || |||  ||||||||||| ||||| |||||| ||| |||||    
T  29510314 acttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccggtgtccatgt 29510400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 34897129 - 34897071
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||| ||||| |||||    
T  34897129 taattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtc 34897071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 39954294 - 39954352
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||||||| ||||| |||||||||||||||| |||  ||||| |||||    
T  39954294 taattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 22652038 - 22651949
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||| | | |||||||| ||||| ||||||||||||| || |||  ||||||||||| ||||| ||||||    
T  22652038 acacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22651949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 210
Target Start/End: Complemental strand, 24613569 - 24613509
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtg 210  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || ||| ||||||||||    
T  24613569 acttgtaattacacttaattatgtgatttt-tcaaattattagctgtgtcggtgtgtcagtg 24613509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 4298896 - 4298972
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||| |||||||||| ||||| ||||||||||| | || |||  |||| ||| |||||||| ||||||    
T  4298896 acttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgttagtatctgtgtcgtgtccg 4298972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 15816126 - 15816202
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| || || |||| ||||||||||||||||||| ||||| ||||||||||||  || |||  |||||||||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtc 15816202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 24362217 - 24362281
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||||| ||| | |||||||||||||||| |||  ||||| |||||||||||    
T  24362217 taattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 235
Target Start/End: Original strand, 13436961 - 13437060
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    |||||| || || |||||| |||||  | |||||||| ||||| ||||||||||||| || |||  |||||||||||  ||||||||||| ||| |||||    
T  13436961 acacgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtcatgtccggtgtccatgt 13437060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 204
Target Start/End: Complemental strand, 4611578 - 4611528
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtg 204  Q
    |||||||||| |||||||| ||||| |||||||||||||||| ||| ||||    
T  4611578 taattacactgaattatgttattttctcaaattattagcggtgtcggtgtg 4611528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 4948701 - 4948659
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||    
T  4948701 acttgtaattacactgaattatgtgattttttcaaattattag 4948659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Complemental strand, 14731756 - 14731718
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  14731756 taattacactaaattatgtgattttctcaaattattagc 14731718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 215
Target Start/End: Original strand, 20679405 - 20679471
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgt 215  Q
    |||| |||||||||| || ||||| ||||| |||||||||||| ||| ||||  |||||||||||||    
T  20679405 acttataattacactgaactatgtgattttctcaaattattaggggtgtcgacatgtcagtgtctgt 20679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 211
Target Start/End: Complemental strand, 22596043 - 22595981
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgt 211  Q
    ||||||||||||||| |||||||| ||||| | ||||||||||| || |||  ||||||||||    
T  22596043 acttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtgt 22595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 25172713 - 25172751
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||| |||| |||||||||||||||||||||||||    
T  25172713 taattacattaaaatatgtaattttatcaaattattagc 25172751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 7658507 - 7658470
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  7658507 taattacactgaattatgtaattttctcaaattattag 7658470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 229
Target Start/End: Original strand, 10497813 - 10497906
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||||||||| |||||| ||||||  ||||||||| ||||| ||||| | ||| | || |||  ||||| ||||| ||||||||| ||||||    
T  10497813 acacgatactgacacttgtgattacatcaaattatgttattttctcaaaattttatccgtgtcggcgtgtctgtgtcagtgtcatgttcgatgt 10497906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 13203685 - 13203648
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  13203685 taattacactgaattatgtaattttctcaaattattag 13203648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 36450764 - 36450833
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||| ||| ||||| ||||||||||||  || |||  ||||||||||| |||||    
T  36450764 acttgtaattacactgaattctgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 36450833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 11927101 - 11927137
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattatta 190  Q
    |||||||||| |||||||| |||||||||||||||||    
T  11927101 taattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 25192357 - 25192437
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||| |||||| ||| |||||||| | ||| ||||||||||||| || |||  ||||||||||| || || ||||||||||    
T  25192357 acttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtgtccgtatcgtgtccgatgt 25192437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 212
Target Start/End: Complemental strand, 27101553 - 27101501
Alignment:
Q  160 cactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| ||||| |||||||||||||||| |||  |||||| ||||    
T  27101553 cactaaattatgtgattttttcaaattattagcggtgtcggcgtgtcaatgtc 27101501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 30271288 - 30271364
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| ||||  |||||||||||||||  ||||||| ||||| |||||| |||||| || |||  |||||||||||    
T  30271288 acacgacactggcacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtc 30271364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 31557045 - 31556970
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| | || |||  ||||||||| |  |||||||||||    
T  31557045 acttgtaattacactgaattatgtgatttt-tcaaattattaactgtgtcggcgtgtcagtgaccatgtcatgtccg 31556970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 36934714 - 36934650
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||| | |||||||| ||||| || ||||||||||||| |||| |||| |||||| |||||    
T  36934714 taattacaatgaattatgtgattttttcgaattattagcggtgtcgacgtgttagtgtccgtgtc 36934650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 40332240 - 40332200
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatt 189  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  40332240 acttgtaattacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 4e-19; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 30838272 - 30838196
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| || ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||||||    
T  30838272 acacgacaccgatacttataattacactaaattatataattttatcaaattattagcagtatcgacgtatcagtgtc 30838196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 848000 - 847924
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||| | | |||||||||||||| ||||||||||||||| ||||  ||||||||||||||||| ||||||    
T  848000 acttgtaattatagtgaattatgtaattttctcaaattattagcggcatcggcgtgtcagtgtctgtgtcgtgtccg 847924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 21945552 - 21945476
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||   |||||||||||||||||||||||    
T  21945552 acttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtgtctgtgtcatgtccg 21945476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 2361985 - 2362048
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| || ||| ||||||| ||||    
T  2361985 acttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtcaatgtc 2362048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 31800477 - 31800568
Alignment:
Q  138 acgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||| || ||||||||||||| |||||||| ||||||| | ||||||||||| || ||| |||||| ||||  ||||||||||| ||||    
T  31800477 acgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtcggtgtgtcggtgttcgtgtcatgtccaatgt 31800568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 138 - 212
Target Start/End: Complemental strand, 903982 - 903908
Alignment:
Q  138 acgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| | |||||||||| |||||||| ||||| ||||||||||| ||||  || ||||||||||||    
T  903982 acgatactgatacatataattacactgaattatgtgattttctcaaattattaacggtgccggtgtgtcagtgtc 903908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 44081592 - 44081669
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttc 231  Q
    |||||||| |||||||| | ||||| ||||||||||| || ||||| ||||||||||||  |||| ||||||||||||    
T  44081592 taattacattaaattatatgattttttcaaattattaacgatatcggtgtgtcagtgtccttgtcgtgtccgatgttc 44081669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 4383429 - 4383354
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| ||||| | ||||||||||||| |||||||| ||||| ||||||||||||  ||||||| |||||||||||    
T  4383429 acacgacactgacatttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcgacgtgtcagtgtc 4383354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 40481685 - 40481610
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||  ||||||  ||||||||||| ||||| ||||||    
T  40481685 acttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 40481610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 192
Target Start/End: Complemental strand, 51701320 - 51701264
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||| ||| | ||||||||||||||| |||||||||||||| |||||||||||||    
T  51701320 acacgacactaacacttgtaattacactcaattatgtaattttttcaaattattagc 51701264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 37203313 - 37203270
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  37203313 acttgtaattacactaaattatgtcattttttcaaattattagc 37203270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 131 - 217
Target Start/End: Original strand, 3947758 - 3947844
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||| |||||| ||||| ||||||||||||||| |||||||  ||||| ||||||||||||| || |||   |||| ||||||||||    
T  3947758 gtccgacacgacactgacacttgtaattacactgaattatgcgattttttcaaattattagctgtgtcggcatgtccgtgtctgtgt 3947844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 20521875 - 20521933
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||| ||||||||||||||||| ||||||||  ||||||||||| ||||| ||||    
T  20521875 aattatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtcgtgtc 20521933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 22440615 - 22440673
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||| |||||||| ||||| ||||||||||| |||| ||||||| ||||||||    
T  22440615 taattacactgaattatgtgattttctcaaattattaacggtgtcgatgtatcagtgtc 22440673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 6485621 - 6485662
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    |||||||||||||||||||||||| ||||| |||||||||||    
T  6485621 acttgtaattacactaaattatgtgattttttcaaattatta 6485662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 23292996 - 23293072
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||| ||| |||||||| ||||| ||||||||||||| || |||  |||||| |||| ||||| ||||||    
T  23292996 acttgtaattatactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 23293072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 212
Target Start/End: Original strand, 27706174 - 27706250
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| ||| | |||||||||||||||||||||||| ||||| | |||||||||   || |||| |||||||||||    
T  27706174 acacgacactcacacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtgtc 27706250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 11596362 - 11596405
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  11596362 acttgtaattacactgaattatgtgattttttcaaattattagc 11596405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 14126121 - 14126196
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||| |||||||||| |||||||| | ||||||||||||||| | || |||  |||| |||||||||||| |||||    
T  14126121 acttataattacactgaattatgtgactttatcaaattattaacagtgtcggcgtgttagtgtctgtgtcgtgtcc 14126196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 28964258 - 28964301
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  28964258 acttgtaattacactgaattatgtgattttttcaaattattagc 28964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 29205493 - 29205450
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  29205493 acttgtaattacactgaattatgtgattttttcaaattattagc 29205450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 220
Target Start/End: Complemental strand, 13783325 - 13783259
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcat 220  Q
    |||||||||| |||| ||| || || |||||| ||||||||| ||| |||||||||||| |||||||    
T  13783325 taattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtcat 13783259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 223
Target Start/End: Complemental strand, 19482717 - 19482643
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    ||||||||||||||  |||||||| || || ||||||||||||  || |||  ||||||||||||||||| ||||    
T  19482717 acttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtgtctgtgtcgtgtc 19482643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 30298996 - 30298926
Alignment:
Q  149 acttgtaattacactaaattatgt-aattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||| || |||  ||||||||||| |||||    
T  30298996 acttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30298926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 30327864 - 30327794
Alignment:
Q  149 acttgtaattacactaaattatgt-aattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||| | |||| ||||||||||||| || |||  ||||||||||| |||||    
T  30327864 acttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 30327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 218
Target Start/End: Original strand, 34200297 - 34200348
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||| ||||| |||||||||||||||  ||||||||| ||||||||||||    
T  34200297 aattatgtgattttctcaaattattagcgg--tcgatgtgtaagtgtctgtgtc 34200348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 8423733 - 8423774
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  8423733 taattacactgaattatgtgattttctcaaattattagcggt 8423774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 20633531 - 20633471
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| | ||||||||   ||| |||||||||||||||| |||| |||||||||||    
T  20633531 acttgtaattacattgaattatgt---tttttcaaattattagcggtgtcgacgtgtcagtgtc 20633471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 163 - 224
Target Start/End: Original strand, 43240995 - 43241056
Alignment:
Q  163 taaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||||| ||||||| | ||||||||||||||  ||| ||||| |||||| ||||||||||    
T  43240995 taaattatataattttcttaaattattagcggttccgacgtgtccgtgtctatgtcatgtcc 43241056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 190
Target Start/End: Original strand, 16303261 - 16303317
Alignment:
Q  134 ccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    |||||||| || || |||||||||||||||||||||| | ||||| ||||| |||||    
T  16303261 ccacacgacaccgacacttgtaattacactaaattatatcattttttcaaaatatta 16303317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 190
Target Start/End: Complemental strand, 24343551 - 24343515
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattatta 190  Q
    |||||||||| |||||||||||||| |||||||||||    
T  24343551 taattacactgaattatgtaattttctcaaattatta 24343515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 35952614 - 35952670
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||| |||||||| | |||||||| | |||||| | |||||||||||||||||||    
T  35952614 acacgacactgatacatataattacattgaattatatgattttatcaaattattagc 35952670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 40179651 - 40179719
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgt 222  Q
    |||||||||| |||||||| ||||| ||||| |||||  ||| || | ||||||||||| |||||||||    
T  40179651 taattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtgtccgtgtcatgt 40179719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 229
Target Start/End: Complemental strand, 5236030 - 5235955
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||||| ||||||| | |||||||||||||| |||| ||||||||||||||||| ||||| ||||    
T  5236030 taattacactaaattatataattttcttaaattattagcggtgtcgacgtgtcagtgtctgtgtcgtgtccaatgt 5235955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 27945103 - 27945014
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||||||| |||||||||||||| |||||||||||| ||| |||  ||||||||||| ||||| ||||||    
T  27945103 acacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtcgtgtccg 27945014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 11061086 - 11061166
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||| |||||||||||| ||||| ||||||||||||| || ||| |||||||||||| ||||| | ||||||||    
T  11061086 acttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtgtccgtgtcgtatccgatgt 11061166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 6028672 - 6028594
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||| |||||||||| || || ||||||||||| |  |||||||||||||||||||||||| |||| |||||    
T  6028672 ttgtaattacattaaattatgttatattttcaaattattaaccatatcgatgtgtcagtgtctgtgtcgtgtctgatgt 6028594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 7328706 - 7328770
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||| |||| | ||||||||||    
T  7328706 taattacactaaattatgttattttctcaaattattagcagtatcgacgtgttaatgtctgtgtc 7328770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 13770740 - 13770660
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||| |||||||||||||| | ||||||||||| || |||  || |||||||| ||||| ||||||||||    
T  13770740 acttgtaattacactgaattatgtaatttttttaaattattagctgtgtcggcgtatcagtgtccgtgtcgtgtccgatgt 13770660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 15902866 - 15902795
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||||||| |||||||||||||||||  ||| |||   |||||||||||||||| ||||||    
T  15902866 taattacactaaattatgtgattttatcaaattattattggtgtcggcatgtcagtgtctgtgtcgtgtccg 15902795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 4793892 - 4793835
Alignment:
Q  169 atgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccga 226  Q
    |||||||||| |||| |||||||| ||||||| ||||||||||||||||| |||||||    
T  4793892 atgtaattttttcaagttattagctgtatcgacgtgtcagtgtctgtgtcgtgtccga 4793835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 214
Target Start/End: Original strand, 9408344 - 9408409
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctg 214  Q
    |||||||||||||||||||||||| ||||| |||||||||||   || ||| ||||||||||||||    
T  9408344 acttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtgtctg 9408409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 26733348 - 26733279
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||| ||| |||||||| ||||| |||||||||||||||| |||| ||||||||||| ||||| ||||    
T  26733348 taattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtcgtgtc 26733279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 155 - 223
Target Start/End: Complemental strand, 598251 - 598183
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    ||||||| | ||||| || ||||| | |||||||||||||| |||||||||||||||| ||||||||||    
T  598251 aattacatttaattacgtgattttcttaaattattagcggtgtcgatgtgtcagtgtccgtgtcatgtc 598183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 5233673 - 5233613
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctg 214  Q
    ||||||||||| ||||||| ||||| ||||||||||| | |||||| ||||||||||||||    
T  5233673 taattacactagattatgtgattttctcaaattattaaccgtatcggtgtgtcagtgtctg 5233613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 17851475 - 17851423
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtc 206  Q
    |||||||||| |||||||| ||||| | |||||||||||||||||||||||||    
T  17851475 taattacactgaattatgtgattttctaaaattattagcggtatcgatgtgtc 17851423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 20549835 - 20549771
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| ||||| || ||||| |||||||||||||||| ||| ||||||||||| ||||||    
T  20549835 taattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgtatgtgtc 20549771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 193
Target Start/End: Complemental strand, 21880201 - 21880157
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcg 193  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||    
T  21880201 acttgtaattacactgaattatgtaattttctcaaattattagcg 21880157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 24105727 - 24105651
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| ||| ||| |||||| ||||||||||||| || |||  ||||||||||| ||||| ||||||    
T  24105727 acttgtaattacactgaatcatgcaattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24105651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 11831483 - 11831424
Alignment:
Q  147 atacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtc 206  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||  || ||||||||||    
T  11831483 atacttgtaattacactaaattatatgattttttcaaattattagttgtgtcgatgtgtc 11831424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 10042999 - 10042917
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||| ||||| |||| ||||||| ||||||||||| | |||||||||||||||| ||| |||  |||| |||||| |||||    
T  10042999 acacgacactgacacttataattacgctaaattatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtc 10042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 28155619 - 28155573
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||||    
T  28155619 acttgtaattacaccgaattatgtaattttctcaaattattagcggt 28155573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 131 - 212
Target Start/End: Original strand, 5409828 - 5409909
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||| |||||| || || |||||||||| |||| |||||||| ||||| ||||||||||||| |||||   |||||||||||    
T  5409828 gtccgacacgacaccgacacttgtaattgcactgaattatgtgattttttcaaattattagctgtatcagcgtgtcagtgtc 5409909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 146 - 191
Target Start/End: Complemental strand, 5954299 - 5954254
Alignment:
Q  146 gatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||| |||||||||||||| ||||||||||||| ||||||||||||    
T  5954299 gatatttgtaattacactagattatgtaattttttcaaattattag 5954254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 8160460 - 8160419
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  8160460 taattacactaaattatgtaattttcttaaattattagcggt 8160419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 12843172 - 12843225
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattatt 189  Q
    |||||| ||||| || |||||||||| | |||||||||||||||||||||||||    
T  12843172 acacgacactgacacatgtaattacattgaattatgtaattttatcaaattatt 12843225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 24339704 - 24339615
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  |||||| ||||  |||| ||||||    
T  24339704 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcaatgtccatgtcgtgtccg 24339615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 32308163 - 32308106
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||| |||||||| ||||| |||||||||||||||| |||  |||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtc 32308106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 22484069 - 22484005
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||| ||| ||||||| |||||| | |||||||||||||| |||  |||||||||||||||||    
T  22484069 taattatactgaattatgcaattttctaaaattattagcggtgtcggcgtgtcagtgtctgtgtc 22484005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 25481951 - 25481871
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  |||||| ||||  |||  ||||||||||    
T  25481951 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccatgttgtgtccgatgt 25481871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 26033458 - 26033514
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||| || || ||||||||||||||| |||||||| ||||| |||||||||||||    
T  26033458 acacgagaccgacacttgtaattacactgaattatgtgattttttcaaattattagc 26033514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 152 - 192
Target Start/End: Complemental strand, 30813858 - 30813818
Alignment:
Q  152 tgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||||||| |||||||||||||| |||||||||||||    
T  30813858 tgtaattacactgaattatgtaattttctcaaattattagc 30813818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 192
Target Start/End: Original strand, 18215144 - 18215239
Alignment:
Q  97 gcacggccactccgtagattaggcgtgttcaggcgtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||| ||||||  ||||||||||||| | || |||  |||||| || || |||||||| ||||||  ||||||| ||||| |||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagc 18215239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 21864857 - 21864775
Alignment:
Q  149 acttgtaattacactaaattatgtaattttat--caaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||||||||||||||||||| | ||||| |  |||||||||||| || ||  |||||| ||||| ||||| ||||||||||    
T  21864857 acttgtaattacactaaattatatgattttttttcaaattattagctgtgtccgtgtgtccgtgtccgtgtcgtgtccgatgt 21864775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 1401077 - 1401011
Alignment:
Q  146 gatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||| |||||||||| |||||||| | ||| |||||||||||||| ||||   |||||||||||    
T  1401077 gatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtgtc 1401011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Original strand, 42720905 - 42720963
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||| | |||||||| ||||| |||||||||||||||| || | |||||||||||    
T  42720905 taattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtgtc 42720963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 22868100 - 22868023
Alignment:
Q  140 gatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||||||| || | |||||||||| |||||||| ||||| ||| |||||||| ||| |||  ||||||||||| ||||    
T  22868100 gatactgacacatataattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtgtcggtgt 22868023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 23191951 - 23191882
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||| || |||||||||||| || ||||| ||||| |||||||||||||||| |||  || ||||||||    
T  23191951 actgaaacatgtaattacactgaaatatgtgattttctcaaattattagcggtgtcggcgtatcagtgtc 23191882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 27093428 - 27093469
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  27093428 taattacactaaattatgtgattttcttaaattattagcggt 27093469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 27184873 - 27184832
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||| ||||| | ||||||||||||||    
T  27184873 taattacactaaattatgtgattttcttaaattattagcggt 27184832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 136 - 189
Target Start/End: Original strand, 27229308 - 27229360
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattatt 189  Q
    |||||| || ||||||| ||||||||||||||||||| |||||| |||||||||    
T  27229308 acacgacaccgatacttataattacactaaattatgtgatttta-caaattatt 27229360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 29787384 - 29787425
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  29787384 taattacactgaattatgtgattttctcaaattattagcggt 29787425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Complemental strand, 3938187 - 3938119
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgt 222  Q
    |||||||| | |||||||| ||||| | ||||||||    ||||||||||||||||| |||||||||||    
T  3938187 taattacattgaattatgtgatttttttaaattatttatagtatcgatgtgtcagtgcctgtgtcatgt 3938119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 4008580 - 4008660
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    ||||||| | ||| ||||||||||||||||||||||  ||| ||   |||||||| |||||||||| || ||||| |||||    
T  4008580 aattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccatgt 4008660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 235
Target Start/End: Original strand, 4013972 - 4014052
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    ||||||| | ||| ||||||||||||||||||||||  ||| ||   |||||||| |||||||||| || ||||| |||||    
T  4013972 aattacattgaatcatgtaattttatcaaattattaaaggtgtctgcgtgtcagtttctgtgtcatatctgatgtccatgt 4014052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 11722124 - 11722184
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||| ||||| ||||||| |||||||| |||  ||||||||||| ||||| ||||||    
T  11722124 aattatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtcgtgtccg 11722184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 43027466 - 43027554
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||| || || ||||||| |||||||  ||||||| ||||| ||||||||||||| |  |||  ||||||||||| ||||| |||||    
T  43027466 acacgacaccgacacttgtatttacactgcattatgtgattttttcaaattattagctgggtcgccgtgtcagtgtccgtgtcgtgtcc 43027554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 43250042 - 43249966
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| ||||||||||  ||||||| ||||| ||||||||||| | || |||  ||||||||||| ||||| ||||||    
T  43250042 acttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcttgtccg 43249966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1528 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 245
Target Start/End: Complemental strand, 1076 - 987
Alignment:
Q  157 ttacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatg-ttgtatctgtg 245  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| |||||||| ||||||||| | | || |||||||| |||||||||||    
T  1076 ttacactgaattatgtaattttttcaaattattagcggtgtcggtgtgtcagcgtctgtgtcgtatacggtgttcatgtttgtatctgtg 987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 92862 - 92793
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||| ||||||||||||||| |||||||||||||| |||||||||||||||| |||  |||||||||||    
T  92862 actgacacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtc 92793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 39323313 - 39323244
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||||||| |||||||||||||||| |||| || |||||||| |||||    
T  39323313 acttgtaattacactgaattatgtaattttgtcaaattattagcggtgtcgacgtttcagtgtccgtgtc 39323244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 20539684 - 20539759
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||||||||||||||||||| | ||||| ||||||||||||| || |||| ||||||||||| ||||| |||||    
T  20539684 acttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtgtccgtgtcgtgtcc 20539759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 23718070 - 23717999
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||| |||||||| | ||| |||||||||||||||| ||| |||||||||||| ||||||||||||    
T  23718070 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 23717999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 24105742 - 24105671
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||| |||||||| | ||| |||||||||||||||| ||| |||||||||||| ||||||||||||    
T  24105742 taattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtcatgtccg 24105671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 4882706 - 4882774
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    ||||||||||||||| |||||| | ||||| |||||| |||||||||||||| |||||||| |||||||    
T  4882706 acttgtaattacactgaattatatcattttttcaaataattagcggtatcgacgtgtcagtatctgtgt 4882774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 30404860 - 30404936
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||| | || |||  ||||||||||| ||||||||||||    
T  30404860 acttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtcatgtccg 30404936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 36756341 - 36756436
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttc 231  Q
    |||||| || || |||| |||||||||| |||||||| ||||  ||||||||||||  || |||| ||||||||||||||||| | ||||||||||    
T  36756341 acacgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtgtctgtgtcgtatccgatgttc 36756436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 21091778 - 21091709
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||| ||||||||||||||| || ||||| ||||| | |||||||||||||| ||| ||||||||||||    
T  21091778 actgacacttgtaattacactgaagtatgttattttcttaaattattagcggtgtcggtgtgtcagtgtc 21091709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 21374709 - 21374778
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| || |||  |||| |||||| |||||    
T  21374709 acttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtgtccgtgtc 21374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 215
Target Start/End: Complemental strand, 23921297 - 23921236
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgt 215  Q
    |||||||||| |||||||||||||| ||||||||||| |||||||||  ||||| |||||||    
T  23921297 taattacactgaattatgtaattttctcaaattattaacggtatcgacctgtcaatgtctgt 23921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 140 - 218
Target Start/End: Complemental strand, 6940313 - 6940235
Alignment:
Q  140 gatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||| || ||||||||||||||| |||||||||| ||| | ||||||||||| || |||  ||||||||||| |||||    
T  6940313 gataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtc 6940235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 18841023 - 18841065
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  18841023 acttgtaattacacttaattatgtaattttttcaaattattag 18841065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 224
Target Start/End: Original strand, 21782833 - 21782903
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||||||| |||||||| ||||| ||||||||||||| || |||  |||||||||| |||||| |||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtgtttgtgtcgtgtcc 21782903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 31808121 - 31808063
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||| |||||||| ||||| | |||||||||||||| ||| ||||||||||||    
T  31808121 taattacactgaattatgtgattttgttaaattattagcggtgtcggtgtgtcagtgtc 31808063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 21616806 - 21616737
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||| |||||||| ||||| |||||||||||||||| |||  ||||| ||||| ||||| ||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtcgtgtc 21616737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 223
Target Start/End: Complemental strand, 28412394 - 28412325
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||| |||||||| ||||||||||||||||| |||| | || |||| |||||| ||||| ||||    
T  28412394 taattacactgaattatgtgattttatcaaattattaacggtgttgacgtgttagtgtccgtgtcgtgtc 28412325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 30717540 - 30717609
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||  | ||| | |||||||||| |||||    
T  30717540 acttgtaattacactgaattatgtgattttttcaaattattagctttgtcggtttgtcagtgtccgtgtc 30717609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 42832286 - 42832343
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtc 206  Q
    |||| |||||||||| || ||||||||||| |||||||||||||||| ||| ||||||    
T  42832286 acttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtc 42832343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 214
Target Start/End: Original strand, 15909647 - 15909707
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctg 214  Q
    |||||||||| |||||||||||||| ||||| | ||||| ||||||  |||||||||||||    
T  15909647 taattacactgaattatgtaattttctcaaaattttagctgtatcggcgtgtcagtgtctg 15909707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 191
Target Start/End: Complemental strand, 30335464 - 30335424
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  30335464 ttgtaattacactaaattatgtcattttttcaaattattag 30335424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 154 - 190
Target Start/End: Original strand, 40361769 - 40361805
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||||||||||||||||||||| |||||||||||    
T  40361769 taattacactaaattatgtaattttttcaaattatta 40361805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 223
Target Start/End: Original strand, 14996233 - 14996308
Alignment:
Q  149 acttgtaattacactaaattatgt-aattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||||||||||||||||||| | | |||| ||||||||||||| || |||   |||||||||| ||||||||||    
T  14996233 acttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtgtccgtgtcatgtc 14996308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 195
Target Start/End: Original strand, 31456638 - 31456697
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||| |||||||||| |||||||||| |||||  ||||||| | ||||||||||||||    
T  31456638 acacgaaactgatacttataattacactgaattacataattttcttaaattattagcggt 31456697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 34691820 - 34691863
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtat 197  Q
    |||||||||| |||||| | ||||||||||||||||||||||||    
T  34691820 taattacactgaattatatgattttatcaaattattagcggtat 34691863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 154 - 197
Target Start/End: Original strand, 34714232 - 34714275
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtat 197  Q
    |||||||||| |||||| | ||||||||||||||||||||||||    
T  34714232 taattacactgaattatatgattttatcaaattattagcggtat 34714275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 21624316 - 21624246
Alignment:
Q  149 acttgtaattacactaaattatg-taattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| ||||||| || |||| | ||||||||||| || |||  |||||||||||||||||    
T  21624316 acttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtgtctgtgtc 21624246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 30527592 - 30527674
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||| || || | ||||||||||||||||| | ||||| ||||||||||| | || | | |||||||||||| |||||    
T  30527592 acacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtc 30527674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 190
Target Start/End: Complemental strand, 15972922 - 15972881
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||||||||||| |||| ||||||||| |||||||||||    
T  15972922 acttgtaattacactgaattgtgtaattttttcaaattatta 15972881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 28677953 - 28677912
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattagcggt 28677912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 36281727 - 36281686
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtat 197  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||    
T  36281727 attacactaaattatgtgattttctcaaattattaacggtat 36281686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 36409642 - 36409683
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||| ||||| ||||||||| ||||||    
T  36409642 taattacactaaattatgtgattttttcaaattatcagcggt 36409683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 37559026 - 37558957
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||| | |||||||| |||||  |||||||||||| || |||  ||||||||||| |||||    
T  37559026 acttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtc 37558957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 223
Target Start/End: Original strand, 12940947 - 12941019
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    ||||||||||||| |||||| | ||||| ||||||||||||  || || | ||||||||||| ||||| ||||    
T  12940947 ttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtgtccgtgtcgtgtc 12941019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 212
Target Start/End: Original strand, 29970566 - 29970622
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||| || ||||  ||||| |||||||||||||||| || |||||||||||||    
T  29970566 attacactgaactatgcgattttctcaaattattagcggtgtcaatgtgtcagtgtc 29970622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 33884100 - 33884020
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||||| ||| |||| ||||| ||| | | ||| ||||||||||||||| ||||| ||| | |||| |||||    
T  33884100 acttgtaattacactgaatcatgtcattttctcacaattttatcggtatcgatgtgtctgtgtcagtgccgtgtctgatgt 33884020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 37411259 - 37411323
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||| ||||| |||||||| ||||| |||||||||||||||| |||   |||||| |||||||||    
T  37411259 taatcacactgaattatgtgattttctcaaattattagcggtgtcggcatgtcagcgtctgtgtc 37411323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 136 - 225
Target Start/End: Complemental strand, 20234 - 20145
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  |||||| |||| ||||| ||||||    
T  20234 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcattgtccgtgtcgtgtccg 20145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 6326302 - 6326383
Alignment:
Q  144 ctgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| ||||||||||||||| |||||||||||||| |||||||| ||||| | |||  ||||||||||| ||||| ||||||    
T  6326302 ctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtgtccgtgtcgtgtccg 6326383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 14674318 - 14674249
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||||||||||||||||| ||||| ||||||||||||| || |||  ||||||||||| |||||    
T  14674318 acttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 43001849 - 43001780
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||||||| ||||||||||||| || ||||  |||||||||| |||||    
T  43001849 acttgtaattacactgaattatgtaattttttcaaattattagcagtgtcgacatgtcagtgtccgtgtc 43001780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Original strand, 5467993 - 5468057
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| |||||||| ||||||||||||||||| |||||| || |||||||||||| ||||    
T  5467993 taattacactgaattatgtgattttatcaaattattatcggtattgacgtgtcagtgtctatgtc 5468057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 154 - 218
Target Start/End: Complemental strand, 27144507 - 27144443
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||||||| ||||  |||||||||||||||| |||  |||||||||||||||||    
T  27144507 taattacactaaattatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtc 27144443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 22013458 - 22013387
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||||||||||||  |||||||||||| || |||  ||||||||||| ||||| ||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 22013387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 12927698 - 12927628
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    ||||||||||||||||| | ||||| |||||||||||||| | ||| |||||| |||||||| ||||||||    
T  12927698 taattacactaaattatatgattttctcaaattattagcgatgtcggtgtgtccgtgtctgtatcatgtcc 12927628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 36838587 - 36838546
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  36838587 taattacactaaattatgtaattttctcaaattattagcggt 36838546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 21191066 - 21191142
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||   |||||||||| ||||| ||||||    
T  21191066 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcatgtcagtgtccgtgtcgtgtccg 21191142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 23221022 - 23220954
Alignment:
Q  159 acactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgat 227  Q
    |||||||||||||| |||||||||||||||||||||| ||||  ||||||  | | |||||||||||||    
T  23221022 acactaaattatgtgattttatcaaattattagcggtgtcgacatgtcagcatatatgtcatgtccgat 23220954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 195
Target Start/End: Complemental strand, 27932282 - 27932238
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||    
T  27932282 ttgtaattacactgaattatgtaattttctcaaattattagcggt 27932238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 136 - 212
Target Start/End: Complemental strand, 39698603 - 39698527
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| ||||||||||||| || ||   |||||||||||    
T  39698603 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtc 39698527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 7175044 - 7175098
Alignment:
Q  164 aaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||| ||||| ||||||||||| |||| |||||||||||||||| |||||    
T  7175044 aaattatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 21522797 - 21522723
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||| |||||||| ||||| | ||||||||||| || |||  ||||||||||| ||||| ||||||    
T  21522797 ttgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21522723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 225
Target Start/End: Complemental strand, 21533363 - 21533289
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||| |||||||| ||||| | ||||||||||| || |||  ||||||||||| ||||| ||||||    
T  21533363 ttgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 21533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 41633782 - 41633716
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    ||||||||||||| |||||||||| ||| ||||||||||||| || |||  |||||||| |||||||    
T  41633782 ttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagtatctgtgt 41633716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 152 - 218
Target Start/End: Original strand, 42488066 - 42488132
Alignment:
Q  152 tgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||||| | |||||| ||||||||| ||||||| | |||| |||| |||||||||||||||||    
T  42488066 tgtaattacattgaattatataattttattaaattatcaacggtgtcgacgtgtcagtgtctgtgtc 42488132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 225
Target Start/End: Original strand, 13287396 - 13287485
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||| || || ||||||| ||||||| |||||||| ||||| ||||||||||| | || |||| |||| |||||| ||||| ||||||    
T  13287396 acacgacaccgacacttgtagttacactgaattatgtgattttttcaaattattatctgtgtcgacgtgttagtgtccgtgtcgtgtccg 13287485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 155 - 212
Target Start/End: Complemental strand, 19438386 - 19438329
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||| |||||||| ||||| ||||||||| |||| | ||||||||||||||||    
T  19438386 aattacactgaattatgtgattttctcaaattatcagcgatgtcgatgtgtcagtgtc 19438329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 19579763 - 19579682
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||||| || || |||||||||| ||||||||||||| ||||| ||||||||||||| || |||  || |||||||| ||||    
T  19579763 acacgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtgtccgtgt 19579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 225
Target Start/End: Original strand, 26205777 - 26205846
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||| |||||||| ||||| ||||| | ||| ||||||||| |||||||||||  |||||||||||    
T  26205777 attacactgaattatgtcattttctcaaaattttatcggtatcgacgtgtcagtgtccatgtcatgtccg 26205846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 21576755 - 21576798
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||    
T  21576755 acttgtaattacactgaattatgtgattttttcaaattattagc 21576798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 139 - 190
Target Start/End: Original strand, 24906301 - 24906352
Alignment:
Q  139 cgatactgatacttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    |||||| || ||||||||||||||| |||||||| ||||| |||||||||||    
T  24906301 cgataccgacacttgtaattacactgaattatgtcattttttcaaattatta 24906352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 31084372 - 31084309
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||| | |||||||| ||||| ||||||||||||| || |||  |||||||||||    
T  31084372 acttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 212
Target Start/End: Complemental strand, 42893409 - 42893346
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||||||||  ||||||| ||||| ||||||||||||| || ||| |||||| |||||    
T  42893409 acttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtc 42893346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 6247671 - 6247629
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||    
T  6247671 acttgtaattacactgaattatgtgattttttcaaattattag 6247629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 19168838 - 19168900
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||| ||| |||| |||||||||||||| ||||||| | | |||||||||||| |||||    
T  19168838 attacactgaataatgtgattttatcaaattaatagcggtgtaggtgtgtcagtgtccgtgtc 19168900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 33178074 - 33178032
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||||||||||||||||| ||||| | ||||||||||    
T  33178074 acttgtaattacactaaattatgtgatttttttaaattattag 33178032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 14422951 - 14422877
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| |||||||||| |||||||| |||||   ||||||||||| |||||| ||||||||||||  |||| ||||||    
T  14422951 acttataattacactgaattatgtgattttt--aaattattagctgtatcggtgtgtcagtgtccttgtcgtgtccg 14422877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 15410465 - 15410538
Alignment:
Q  156 attacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||||| ||| || ||||||| | |||||||||||||| |||  ||||||||||| ||||| |||| |||||    
T  15410465 attacactgaatcatataattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtcgtgtctgatgt 15410538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 166 - 247
Target Start/End: Complemental strand, 17123080 - 17122999
Alignment:
Q  166 attatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgttgtatctgtgct 247  Q
    ||||||| ||||| |||||||||||||||| | |  |||||||||||  ||| ||||||||||| | |||  ||||||||||    
T  17123080 attatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccatgttatgtccgatgtccgtgtcctatctgtgct 17122999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 191
Target Start/End: Complemental strand, 35017081 - 35017044
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  35017081 taattacactaaattatgtgattttctcaaattattag 35017044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 154 - 222
Target Start/End: Original strand, 16203810 - 16203878
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgt 222  Q
    ||||||||||||||||||  ||||| ||||||||||||| || |||   ||| |||||| |||||||||    
T  16203810 taattacactaaattatgagattttctcaaattattagcagtgtcggcatgttagtgtccgtgtcatgt 16203878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 228
Target Start/End: Complemental strand, 26609391 - 26609323
Alignment:
Q  160 cactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatg 228  Q
    |||||||| |||| |||||||||||||||||| ||| ||| ||||||| ||| | |||| | |||||||    
T  26609391 cactaaatcatgtgattttatcaaattattagtggtgtcggtgtgtcaatgtttatgtcgtttccgatg 26609323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 7042 - 7105
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||| |||||||||||||||||| ||||||||||||| || |||| || ||||||||    
T  7042 acttgtaattatactaaattatgtaattttttcaaattattagctgtgtcgacgtatcagtgtc 7105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 11665988 - 11665917
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| ||| |||||||||||||||||||| | ||| ||||| ||||| |||||| ||||||    
T  11665988 taattacactaaattgtgtgattttatcaaattattagcgttgtcggtgtgttagtgtgtgtgtcgtgtccg 11665917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 235
Target Start/End: Complemental strand, 14829751 - 14829653
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttcatgt 235  Q
    |||||| || || ||||||||||||  | |||||||| ||||| ||||||||||||| || |||  |||||||||||||||||||||||| ||| |||||    
T  14829751 acacgacaccgacacttgtaattaccatgaattatgtgatttt-tcaaattattagctgtgtcggcgtgtcagtgtctgtgtcatgtccggtgtccatgt 14829653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 25064953 - 25064882
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||||||| ||||| |||||| ||||||||| |||  |||||| |||||||||| ||||||    
T  25064953 taattacactaaattatgtgattttttcaaatcattagcggtgtcggcgtgtcaatgtctgtgtcgtgtccg 25064882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 4990977 - 4991046
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||||||||| ||||| |||||||||| |||  |||||||| || |||||    
T  4990977 acttgtaattacactgaattatgtaattttctcaaactattagcggtgtcggagtgtcagtctccgtgtc 4991046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Original strand, 10268490 - 10268559
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||| |||||||||||||||||||||||| ||||| ||||||||||| | || |||  |||||||||||    
T  10268490 actgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtc 10268559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 8587031 - 8587107
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| |||||||| |||  || |||  ||||||||||| ||||||||||||    
T  8587031 acttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtgtccgtgtcatgtccg 8587107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 1509588 - 1509545
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||||||||||||||||||| ||||| |||||||||||||    
T  1509588 acttgtaattacactaaattatgtgattttttcaaattattagc 1509545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 229
Target Start/End: Original strand, 16192765 - 16192840
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    |||||||||| |||||||| ||||| ||||||||||| |||| ||| |||||| |  |||| ||||||||||||||    
T  16192765 taattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtcggcatctgagtcatgtccgatgt 16192840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 211
Target Start/End: Original strand, 4987301 - 4987363
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgt 211  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  ||||||||||    
T  4987301 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgt 4987363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 231
Target Start/End: Original strand, 34307790 - 34307872
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgttc 231  Q
    |||| |||||||||| || ||||| ||||| |||||||||||||||| ||   ||||  |||||||||||||||||| |||||    
T  34307790 acttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgttcgtgtctgtgtcatgtccggtgttc 34307872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 55401124 - 55401082
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  55401124 acttgtaattacactaaattatgtgattttttcaaattattag 55401082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 190
Target Start/End: Original strand, 17568693 - 17568734
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatta 190  Q
    ||||||||||||| |||||||||||||||| |||||||||||    
T  17568693 acttgtaattacattaaattatgtaattttctcaaattatta 17568734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 25948897 - 25948966
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||| |||||||||| |||||||| ||||| ||||||||||||| ||||||   |||||||||| |||||    
T  25948897 acttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtc 25948966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 49505169 - 49505210
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||| ||||| ||||||||||||||||    
T  49505169 taattacactaaattatgtgattttctcaaattattagcggt 49505210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 26508159 - 26508083
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || ||   |||||||| ||||| || ||||||    
T  26508159 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatctgtatcgtgtccg 26508083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 28918050 - 28917974
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| |||||||||||||  | |||  |||||||| || ||||| ||||||    
T  28918050 acttgtaattacactgaattatgtgattttttcaaattattagctatgtcggcgtgtcagtttccgtgtcgtgtccg 28917974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 8383306 - 8383231
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||| |||||||||| |||||| | ||||| |||||||||||||||| |||  |||||| |||| ||||| |||||    
T  8383306 acttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtcgtgtcc 8383231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 191
Target Start/End: Complemental strand, 14209175 - 14209120
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| | ||||||||||    
T  14209175 acacgacactgacacttgtaattacactgaattatgtgattttttaaaattattag 14209120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 212
Target Start/End: Complemental strand, 14747610 - 14747547
Alignment:
Q  150 cttgtaattacactaaattatgt-aattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||||||||||| | |||| ||||||||||||| || |||  |||||||||||    
T  14747610 cttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtgtc 14747547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 199
Target Start/End: Complemental strand, 14832161 - 14832098
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcg 199  Q
    |||||| ||||| ||||||||||||| | | |||||| ||||| ||||||||||||| ||||||    
T  14832161 acacgacactgacacttgtaattacattgagttatgtgattttttcaaattattagctgtatcg 14832098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 15544726 - 15544679
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||| |||||||||||||||||||||| || | |||||||||||    
T  15544726 aattatgtgattttatcaaattattagcggtgtcaacgtgtcagtgtc 15544679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 21256984 - 21257039
Alignment:
Q  137 cacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||||||| || ||||||||||| ||| |||||||| ||||| |||||||||||||    
T  21256984 cacgataccgacacttgtaattatactgaattatgtgattttttcaaattattagc 21257039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 26492212 - 26492291
Alignment:
Q  146 gatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||||||||||||| |||| | | ||||| |||||||||||||  | |||  ||||||||||| ||||| ||||||    
T  26492212 gatacttgtaattacactgaattgtatgattttttcaaattattagctctgtcggcgtgtcagtgtccgtgtcgtgtccg 26492291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 11313815 - 11313853
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  11313815 taattacactaaattatgtgattttctcaaattattagc 11313853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 192
Target Start/End: Original strand, 27277853 - 27277891
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||||||||| ||||| |||||||||||||    
T  27277853 taattacactaaattatgtgattttctcaaattattagc 27277891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 212
Target Start/End: Complemental strand, 29508488 - 29508430
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    |||||||||| |||||| | ||||| |||||||||||| ||||||| ||||||| ||||    
T  29508488 taattacactgaattatatgattttttcaaattattagtggtatcggtgtgtcaatgtc 29508430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Complemental strand, 7928494 - 7928453
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||||||| ||||| ||||||||||||||||    
T  7928494 taattacactgaattatgtgattttttcaaattattagcggt 7928453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 8039850 - 8039891
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||||| ||||||| ||||||||||||||||    
T  8039850 taattacactgaattatataattttctcaaattattagcggt 8039891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 224
Target Start/End: Complemental strand, 9800083 - 9800014
Alignment:
Q  155 aattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    ||||||||  |||||||||||||| |||||||||||| ||| |||  ||||||||||  ||||| |||||    
T  9800083 aattacacggaattatgtaattttctcaaattattagaggtgtcggcgtgtcagtgtacgtgtcgtgtcc 9800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 149 - 218
Target Start/End: Original strand, 16000026 - 16000095
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||| ||||||| |||||||| ||||| | ||||||||||  || |||  |||||||||||||||||    
T  16000026 acttgtagttacactgaattatgttatttttttaaattattagttgtgtcggcgtgtcagtgtctgtgtc 16000095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 195
Target Start/End: Original strand, 32804555 - 32804596
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggt 195  Q
    ||||||||||||||||||| ||||| ||||||||||| ||||    
T  32804555 taattacactaaattatgtgattttctcaaattattaacggt 32804596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 191
Target Start/End: Complemental strand, 34910365 - 34910324
Alignment:
Q  150 cttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||||||| |||||||| ||||| ||||||||||||    
T  34910365 cttgtaattacactgaattatgtgattttttcaaattattag 34910324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 192
Target Start/End: Original strand, 49651778 - 49651839
Alignment:
Q  131 gtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    |||| |||||| || || ||||||||||||| | |||||||| ||||| |||||||||||||    
T  49651778 gtccgacacgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattagc 49651839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 3164043 - 3164111
Alignment:
Q  157 ttacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||| |||||||| ||||| ||||||||||||| || |||| ||| || |||| ||||| ||||||    
T  3164043 ttacactgaattatgtgattttttcaaattattagctgtgtcgacgtgccattgtccgtgtcgtgtccg 3164111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 225
Target Start/End: Original strand, 5441057 - 5441117
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||||||| ||||| ||||||| ||||||||  ||  ||||||||||||||||| ||||||    
T  5441057 aattatgtgattttctcaaatttttagcggtgacggcgtgtcagtgtctgtgtcgtgtccg 5441117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 10335296 - 10335372
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||| |||||||||| ||||| | ||| ||||||||||||  || |||  ||||||||||| ||||| ||||||    
T  10335296 acttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 10335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 11610570 - 11610502
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||||||| |||||| |||||||| ||||| | |||||||||||||| | |  |||||||| |||||||    
T  11610570 acttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagtatctgtgt 11610502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 191
Target Start/End: Complemental strand, 12083958 - 12083910
Alignment:
Q  143 actgatacttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||| ||||||||||||||| ||||||||| |||| |||| |||||||    
T  12083958 actgacacttgtaattacactgaattatgtagttttctcaatttattag 12083910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 189
Target Start/End: Complemental strand, 20503514 - 20503474
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattatt 189  Q
    ||||||||||||||| |||||||| ||||| ||||||||||    
T  20503514 acttgtaattacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 225
Target Start/End: Original strand, 24205051 - 24205127
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    |||| ||||||||||  ||||||| ||||| ||||||||||| | || |||  ||||||||||| ||||| ||||||    
T  24205051 acttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtcgtgtccg 24205127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 218
Target Start/End: Complemental strand, 51860 - 51791
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||| || |||  ||||||||||| |||||    
T  51860 acttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 51791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 19624 - 19549
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||  ||||||  ||||||||||| ||||| ||||||    
T  19624 acttgtaattacactgaattatgtgatttt-tcaaattattagttgtatcggcgtgtcagtgtcagtgtcgtgtccg 19549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 149 - 225
Target Start/End: Complemental strand, 8847 - 8771
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||||||| || | ||||| ||||||||||||| || |||  ||||||||||| ||||| ||||||    
T  8847 acttgtaattacactaaataatatgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 8771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 212
Target Start/End: Original strand, 192259 - 192322
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtc 212  Q
    ||||||||||||||  |||||||||||||| ||||||||||| |||| |||  |||||||||||    
T  192259 acttgtaattacaccgaattatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtc 192322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 143 - 225
Target Start/End: Original strand, 178822 - 178905
Alignment:
Q  143 actgatacttgtaattacactaaattatg-taattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||| ||||||||||||||| ||||||| | ||||| ||||||||||||  || |||  ||||||||||| ||||| ||||||    
T  178822 actgacacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtgtcgtgtccg 178905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 241638 - 241567
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||||||||||||| |||||  |||||||||||| || |||  ||||||||||| ||||| ||||||    
T  241638 taattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtgtccgtgtcgtgtccg 241567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 136 - 178
Target Start/End: Complemental strand, 2990 - 2948
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaatttt 178  Q
    |||||| |||||||||||||||||||||||||||||| |||||    
T  2990 acacgacactgatacttgtaattacactaaattatgtgatttt 2948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 195
Target Start/End: Complemental strand, 63822 - 63776
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggt 195  Q
    |||||||||| |||| |||||||||||||| ||||||||||||||||    
T  63822 acttgtaattgcactgaattatgtaattttctcaaattattagcggt 63776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 229
Target Start/End: Complemental strand, 46729 - 46651
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccgatgt 229  Q
    ||||||||||||| |||||||| ||||| ||||||||||| | || |||  |||||| |||| ||||| ||||||||||    
T  46729 ttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtcgtgtccgatgt 46651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 191
Target Start/End: Original strand, 17759 - 17801
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    |||||||||||||||||||||||| ||||| ||||||||||||    
T  17759 acttgtaattacactaaattatgtgattttttcaaattattag 17801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 225
Target Start/End: Complemental strand, 13448 - 13373
Alignment:
Q  150 cttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||| |||| |||||||| ||||| ||||||||||||  || |||  ||||||||||| ||||||| ||||    
T  13448 cttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccg 13373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 150 - 225
Target Start/End: Original strand, 21879 - 21954
Alignment:
Q  150 cttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtccg 225  Q
    ||||||||| |||| |||||||| ||||| ||||||||||||  || |||  ||||||||||| ||||||| ||||    
T  21879 cttgtaattgcactgaattatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtcatctccg 21954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 223
Target Start/End: Original strand, 3846 - 3933
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtc 223  Q
    |||||| ||||| ||||||||||||||| |||||||| ||||| | ||||||||| | || |||   | |||||||||||||| ||||    
T  3846 acacgacactgacacttgtaattacactgaattatgtgatttttttaaattattaaccgtgtcggcatatcagtgtctgtgtcgtgtc 3933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 191
Target Start/End: Complemental strand, 14579 - 14537
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattag 191  Q
    ||||||||||||||| |||||||| ||||| ||||||||||||    
T  14579 acttgtaattacactgaattatgtgattttttcaaattattag 14537  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 224
Target Start/End: Complemental strand, 90887 - 90817
Alignment:
Q  154 taattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtcatgtcc 224  Q
    |||||||||| |||||| | ||||| |||||||||||  ||| | | |||||||||||||||||| |||||    
T  90887 taattacactgaattatatgattttctcaaattattaatggtgttggtgtgtcagtgtctgtgtcgtgtcc 90817  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Original strand, 135285 - 135391
Alignment:
Q  112 agattaggcgtgttcaggcgtcccacacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgt 211  Q
    ||||||||||||| | || |||  |||||| || || || | |||||||||  |||||||| ||||| ||||||||||||| || ||| |||||  ||||    
T  135285 agattaggcgtgtcctggtgtcggacacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgt 135384  T
Q  212 ctgtgtc 218  Q
    |||||||    
T  135385 ctgtgtc 135391  T

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Target: scaffold0008 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 263369 - 263451
Alignment:
Q  136 acacgatactgatacttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||| ||||| |||| |||||||||| ||||||||  |||| ||||||||||||| || | ||  |||||||||| |||||    
T  263369 acacgacactgacacttataattacactgaattatgtggttttctcaaattattagcagtgttgacatgtcagtgtccgtgtc 263451  T

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Target: scaffold0598 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 8071 - 8132
Alignment:
Q  157 ttacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    ||||||| |||||||| ||||| ||||||||||| | ||||||| ||||| ||||| |||||    
T  8071 ttacactgaattatgtcattttctcaaattattatccgtatcgacgtgtcggtgtccgtgtc 8132  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 26426 - 26373
Alignment:
Q  165 aattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgtc 218  Q
    |||||||| ||||| |||||||||||| ||| |||| |||||| ||||||||||    
T  26426 aattatgtgattttctcaaattattagtggtgtcgacgtgtcactgtctgtgtc 26373  T

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Target: scaffold0066 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 151 - 192
Target Start/End: Original strand, 33375 - 33416
Alignment:
Q  151 ttgtaattacactaaattatgtaattttatcaaattattagc 192  Q
    ||||||||||||| |||||||| ||||| |||||||||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagc 33416  T

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Target: scaffold0050 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 70327 - 70259
Alignment:
Q  149 acttgtaattacactaaattatgtaattttatcaaattattagcggtatcgatgtgtcagtgtctgtgt 217  Q
    |||| |||||||||| |||||||| ||||| ||||||||||| | || ||||  |||| ||||||||||    
T  70327 acttataattacactgaattatgttattttttcaaattattaactgtgtcgacatgtctgtgtctgtgt 70259  T

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