View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5761-Insertion-7 (Length: 180)
Name: NF5761-Insertion-7
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5761-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 4e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 4e-89
Query Start/End: Original strand, 11 - 180
Target Start/End: Original strand, 16352781 - 16352950
Alignment:
| Q |
11 |
aaaagtgctacactttgatccttctccatcaataacattcaaagaagtagcttcctgcaggatccactgaaattcaacccttgtcgcttagactggtttt |
110 |
Q |
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| T |
16352781 |
aaaagtgctacactttgatccttctccatcaataacattcaaagaagtagcttcctgcaggatccactgagattcaacccttgtcgcttagactggtttt |
16352880 |
T |
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| Q |
111 |
attcaaaaagcgaagatgggagggtgtttttcttcaagatcatcatgcacatcaaagaaaatccgtttgg |
180 |
Q |
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| T |
16352881 |
attcaaaaagcgaagatgggagggtgtttttcttcaagatcatcatgcacatcaaagaaaatccgtttgg |
16352950 |
T |
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