View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5761_high_45 (Length: 230)
Name: NF5761_high_45
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5761_high_45 |
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Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 9 - 216
Target Start/End: Complemental strand, 25179954 - 25179747
Alignment:
| Q |
9 |
taagaaaattaatactatagcacaatccacttgcaactcaatttgaacacggcgccgaaattaattatacctcgtgctcttatctatataaagcacattc |
108 |
Q |
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| T |
25179954 |
taagaaaattaatactatagcacaatccacttgcaactcaatttgaacacggcgccgaaattaattatacctcgtgctcttatctatataaagcacattc |
25179855 |
T |
|
| Q |
109 |
ttggttcctctcaatcacactacaattgctacactatatccttcttccaatccctctttgtttttgtgcttctctagtttcatctatctataacccaaaa |
208 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25179854 |
ttggttcctctcaatcacactacaattgctacactatatccttcttccaatccctctttgtttttgtgcttctctagtttcatctatctataacccaaaa |
25179755 |
T |
|
| Q |
209 |
gtgaaaca |
216 |
Q |
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|||||||| |
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| T |
25179754 |
gtgaaaca |
25179747 |
T |
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