View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5761_low_12 (Length: 465)

Name: NF5761_low_12
Description: NF5761
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5761_low_12
NF5761_low_12
[»] chr7 (57 HSPs)
chr7 (181-294)||(7196862-7196975)
chr7 (291-446)||(7197210-7197365)
chr7 (318-446)||(25481893-25482021)
chr7 (315-449)||(5409768-5409907)
chr7 (314-439)||(9778498-9778628)
chr7 (378-439)||(7058424-7058485)
chr7 (318-430)||(21880159-21880271)
chr7 (338-437)||(8234146-8234245)
chr7 (319-449)||(20549779-20549909)
chr7 (316-449)||(33994200-33994333)
chr7 (26-86)||(7196661-7196720)
chr7 (378-446)||(24339633-24339701)
chr7 (372-445)||(40287351-40287423)
chr7 (386-446)||(11665448-11665508)
chr7 (317-449)||(15680797-15680929)
chr7 (378-437)||(3991324-3991383)
chr7 (378-449)||(9408334-9408405)
chr7 (378-450)||(11272586-11272660)
chr7 (378-437)||(11831432-11831491)
chr7 (318-449)||(24105666-24105797)
chr7 (378-449)||(27945029-27945100)
chr7 (318-437)||(21864806-21864927)
chr7 (373-449)||(11061071-11061147)
chr7 (379-439)||(13300408-13300468)
chr7 (318-449)||(43027404-43027540)
chr7 (323-449)||(13770679-13770810)
chr7 (379-449)||(7438694-7438764)
chr7 (386-439)||(26033469-26033522)
chr7 (393-449)||(6630927-6630983)
chr7 (378-429)||(11890919-11890970)
chr7 (378-449)||(18215186-18215257)
chr7 (378-445)||(25822647-25822714)
chr7 (373-444)||(28155563-28155634)
chr7 (378-436)||(32094020-32094079)
chr7 (394-449)||(35861952-35862007)
chr7 (326-449)||(41020484-41020607)
chr7 (373-439)||(19213801-19213867)
chr7 (363-449)||(26733292-26733378)
chr7 (340-449)||(5835235-5835344)
chr7 (318-430)||(598215-598327)
chr7 (378-429)||(18039006-18039058)
chr7 (378-449)||(21560486-21560562)
chr7 (393-449)||(22868030-22868086)
chr7 (369-449)||(42720881-42720961)
chr7 (387-449)||(13557750-13557815)
chr7 (378-437)||(19992001-19992060)
chr7 (394-449)||(32308108-32308163)
chr7 (358-437)||(7973103-7973184)
chr7 (373-455)||(21826255-21826337)
chr7 (395-445)||(23128678-23128728)
chr7 (373-446)||(8090020-8090093)
chr7 (372-429)||(38143231-38143288)
chr7 (373-449)||(1401013-1401089)
chr7 (393-449)||(18013089-18013145)
chr7 (318-449)||(18212973-18213105)
chr7 (391-455)||(29763187-29763251)
chr7 (321-417)||(39138464-39138560)
[»] chr6 (72 HSPs)
chr6 (318-446)||(34595125-34595253)
chr6 (368-449)||(8776963-8777044)
chr6 (358-448)||(7977810-7977900)
chr6 (319-449)||(17841530-17841660)
chr6 (321-445)||(32978842-32978967)
chr6 (316-446)||(4877933-4878063)
chr6 (318-449)||(28152087-28152217)
chr6 (318-449)||(16766685-16766827)
chr6 (378-449)||(10770674-10770745)
chr6 (320-449)||(12696312-12696446)
chr6 (338-447)||(853819-853928)
chr6 (320-449)||(7265535-7265664)
chr6 (380-449)||(16833296-16833365)
chr6 (377-449)||(7801155-7801227)
chr6 (373-449)||(7938104-7938180)
chr6 (386-449)||(1681746-1681809)
chr6 (378-449)||(8365519-8365590)
chr6 (316-439)||(28715293-28715416)
chr6 (316-446)||(33001227-33001357)
chr6 (378-455)||(24115847-24115924)
chr6 (373-449)||(426509-426585)
chr6 (373-449)||(6898276-6898352)
chr6 (386-449)||(17302544-17302608)
chr6 (378-449)||(9107370-9107441)
chr6 (358-439)||(32511646-32511727)
chr6 (316-455)||(17327588-17327732)
chr6 (364-448)||(19040341-19040425)
chr6 (386-434)||(31384923-31384971)
chr6 (378-449)||(3398607-3398677)
chr6 (321-449)||(7996325-7996449)
chr6 (321-449)||(8022352-8022476)
chr6 (319-449)||(9658867-9658998)
chr6 (386-449)||(31959147-31959210)
chr6 (315-389)||(18367895-18367969)
chr6 (373-429)||(403859-403915)
chr6 (378-429)||(5970108-5970159)
chr6 (378-449)||(7930293-7930364)
chr6 (323-430)||(12627522-12627629)
chr6 (318-437)||(13360313-13360431)
chr6 (380-430)||(9522898-9522948)
chr6 (357-427)||(13364684-13364754)
chr6 (379-437)||(15489733-15489791)
chr6 (355-445)||(23771571-23771660)
chr6 (393-439)||(34225824-34225870)
chr6 (377-445)||(3209373-3209442)
chr6 (368-449)||(5626686-5626767)
chr6 (376-429)||(6327516-6327569)
chr6 (316-389)||(10339052-10339125)
chr6 (386-451)||(17341672-17341737)
chr6 (357-437)||(24645480-24645561)
chr6 (373-437)||(1191695-1191759)
chr6 (390-430)||(2224233-2224273)
chr6 (378-430)||(7151419-7151471)
chr6 (382-429)||(4118337-4118384)
chr6 (378-436)||(9911528-9911587)
chr6 (373-408)||(16388212-16388247)
chr6 (318-389)||(16488519-16488590)
chr6 (363-429)||(31579212-31579276)
chr6 (373-427)||(1700362-1700416)
chr6 (357-427)||(4864073-4864143)
chr6 (380-430)||(17435206-17435256)
chr6 (379-449)||(19044452-19044522)
chr6 (373-431)||(33419179-33419237)
chr6 (315-380)||(8365445-8365510)
chr6 (373-430)||(21924930-21924987)
chr6 (373-430)||(24614417-24614474)
chr6 (388-437)||(25010212-25010261)
chr6 (373-449)||(5732505-5732581)
chr6 (378-429)||(8713987-8714039)
chr6 (378-430)||(9025494-9025546)
chr6 (364-408)||(26402666-26402710)
chr6 (393-449)||(34290092-34290148)
[»] chr3 (62 HSPs)
chr3 (318-449)||(20503453-20503584)
chr3 (318-449)||(10954940-10955074)
chr3 (318-449)||(55401063-55401194)
chr3 (315-449)||(26492142-26492276)
chr3 (320-448)||(28917990-28918120)
chr3 (318-439)||(51206293-51206414)
chr3 (381-449)||(4987294-4987362)
chr3 (381-448)||(26508099-26508166)
chr3 (310-445)||(35222930-35223065)
chr3 (335-448)||(7171491-7171603)
chr3 (319-449)||(15999951-16000087)
chr3 (374-449)||(8587017-8587092)
chr3 (363-445)||(15505775-15505858)
chr3 (378-445)||(34910309-34910376)
chr3 (316-419)||(40993273-40993376)
chr3 (373-446)||(8383248-8383321)
chr3 (378-446)||(15796294-15796362)
chr3 (377-449)||(21479106-21479178)
chr3 (386-445)||(14209105-14209164)
chr3 (386-449)||(14216880-14216943)
chr3 (386-449)||(14223009-14223072)
chr3 (378-445)||(28812507-28812574)
chr3 (320-431)||(29508450-29508567)
chr3 (378-439)||(1509537-1509598)
chr3 (368-449)||(10335276-10335357)
chr3 (373-449)||(25775496-25775573)
chr3 (373-449)||(10268481-10268557)
chr3 (378-430)||(25948887-25948939)
chr3 (378-429)||(16789020-16789071)
chr3 (386-445)||(21256994-21257053)
chr3 (378-449)||(41961650-41961721)
chr3 (373-430)||(7928457-7928514)
chr3 (380-436)||(17005621-17005677)
chr3 (357-429)||(25093510-25093582)
chr3 (318-437)||(27505246-27505370)
chr3 (393-449)||(29112295-29112351)
chr3 (378-446)||(34185123-34185191)
chr3 (378-430)||(49651786-49651838)
chr3 (378-437)||(3164025-3164084)
chr3 (319-427)||(8789489-8789599)
chr3 (378-449)||(14829678-14829748)
chr3 (363-425)||(6780404-6780466)
chr3 (375-449)||(33359749-33359823)
chr3 (374-438)||(8593135-8593200)
chr3 (318-403)||(13845465-13845550)
chr3 (389-449)||(14747549-14747610)
chr3 (394-443)||(14979175-14979224)
chr3 (378-439)||(15314876-15314937)
chr3 (373-446)||(35994734-35994805)
chr3 (378-446)||(750618-750686)
chr3 (386-445)||(14832091-14832150)
chr3 (319-429)||(15864841-15864950)
chr3 (318-445)||(18426941-18427068)
chr3 (378-449)||(39756224-39756295)
chr3 (402-449)||(40052320-40052367)
chr3 (386-448)||(11610510-11610572)
chr3 (386-444)||(34307788-34307846)
chr3 (318-430)||(11251985-11252095)
chr3 (393-430)||(23870574-23870611)
chr3 (357-430)||(45451560-45451633)
chr3 (378-430)||(8039835-8039887)
chr3 (393-445)||(12703999-12704051)
[»] chr2 (51 HSPs)
chr2 (318-449)||(18840953-18841084)
chr2 (318-449)||(38117099-38117230)
chr2 (320-442)||(2438661-2438783)
chr2 (317-449)||(15972861-15972993)
chr2 (318-449)||(37558965-37559096)
chr2 (357-449)||(30404829-30404921)
chr2 (390-449)||(12940947-12941006)
chr2 (373-446)||(19536392-19536466)
chr2 (357-449)||(20242706-20242798)
chr2 (373-449)||(20473310-20473386)
chr2 (378-449)||(20539674-20539745)
chr2 (373-449)||(18421951-18422027)
chr2 (316-443)||(30335411-30335537)
chr2 (379-445)||(11223864-11223930)
chr2 (378-448)||(12668423-12668493)
chr2 (357-449)||(29176472-29176564)
chr2 (378-437)||(974747-974806)
chr2 (379-449)||(14996224-14996295)
chr2 (378-449)||(15657852-15657923)
chr2 (386-449)||(21374707-21374770)
chr2 (382-449)||(24894377-24894444)
chr2 (378-449)||(36756344-36756415)
chr2 (337-431)||(5367198-5367292)
chr2 (373-449)||(21624254-21624331)
chr2 (318-430)||(30717459-30717582)
chr2 (373-430)||(34691800-34691857)
chr2 (373-430)||(34714212-34714269)
chr2 (326-430)||(5040739-5040845)
chr2 (318-389)||(24009343-24009414)
chr2 (363-449)||(6940243-6940329)
chr2 (335-430)||(12224228-12224325)
chr2 (378-446)||(23058442-23058511)
chr2 (319-404)||(28596502-28596587)
chr2 (318-383)||(42511322-42511387)
chr2 (386-430)||(4882704-4882748)
chr2 (393-449)||(16069269-16069325)
chr2 (373-445)||(18255975-18256047)
chr2 (393-449)||(21782833-21782889)
chr2 (386-446)||(33153415-33153475)
chr2 (378-449)||(37419731-37419802)
chr2 (379-445)||(26769503-26769569)
chr2 (355-389)||(28524485-28524519)
chr2 (393-430)||(18276528-18276565)
chr2 (378-431)||(18622612-18622665)
chr2 (393-430)||(28677916-28677953)
chr2 (411-448)||(31727846-31727883)
chr2 (393-445)||(21616754-21616806)
chr2 (373-429)||(23921261-23921317)
chr2 (372-408)||(27460066-27460102)
chr2 (386-430)||(39323271-39323315)
chr2 (362-438)||(40361738-40361814)
[»] chr5 (53 HSPs)
chr5 (320-449)||(21190998-21191127)
chr5 (318-449)||(21576685-21576816)
chr5 (373-449)||(6247610-6247686)
chr5 (320-430)||(30502330-30502440)
chr5 (320-430)||(30542673-30542783)
chr5 (372-448)||(33178014-33178090)
chr5 (315-446)||(28588611-28588742)
chr5 (386-449)||(39698529-39698592)
chr5 (318-449)||(31084311-31084447)
chr5 (357-437)||(42893360-42893440)
chr5 (386-439)||(15405063-15405116)
chr5 (379-459)||(21351906-21351986)
chr5 (386-449)||(14674257-14674320)
chr5 (316-449)||(43564871-43565002)
chr5 (322-448)||(4105246-4105374)
chr5 (335-446)||(15382468-15382587)
chr5 (375-446)||(8420018-8420089)
chr5 (378-449)||(10298557-10298628)
chr5 (378-449)||(21522738-21522809)
chr5 (378-449)||(21533304-21533375)
chr5 (374-449)||(24906297-24906372)
chr5 (320-430)||(43001807-43001922)
chr5 (352-430)||(23012382-23012460)
chr5 (357-443)||(27932229-27932315)
chr5 (368-449)||(17177013-17177094)
chr5 (319-383)||(6401563-6401627)
chr5 (318-426)||(21194063-21194171)
chr5 (378-446)||(21542021-21542089)
chr5 (393-449)||(41995459-41995515)
chr5 (378-437)||(5894833-5894892)
chr5 (363-449)||(6770531-6770615)
chr5 (378-437)||(7677705-7677764)
chr5 (378-429)||(13287399-13287450)
chr5 (368-419)||(15884006-15884057)
chr5 (378-449)||(19579689-19579760)
chr5 (357-428)||(26312778-26312849)
chr5 (379-445)||(30135305-30135372)
chr5 (378-448)||(41633724-41633794)
chr5 (318-430)||(39205887-39206004)
chr5 (393-449)||(40131609-40131665)
chr5 (318-389)||(21814320-21814391)
chr5 (378-437)||(30183549-30183608)
chr5 (378-439)||(6471889-6471950)
chr5 (319-384)||(21542094-21542159)
chr5 (373-449)||(6326292-6326368)
chr5 (386-430)||(7218275-7218319)
chr5 (386-445)||(17088276-17088336)
chr5 (363-427)||(18421826-18421890)
chr5 (397-449)||(19552562-19552614)
chr5 (393-449)||(22013402-22013458)
chr5 (358-446)||(32630715-32630803)
chr5 (393-429)||(33035816-33035852)
chr5 (361-445)||(42029744-42029828)
[»] chr4 (50 HSPs)
chr4 (318-446)||(23292926-23293054)
chr4 (318-430)||(28964188-28964300)
chr4 (318-437)||(715545-715667)
chr4 (318-437)||(752871-752993)
chr4 (322-449)||(12797282-12797408)
chr4 (318-449)||(35157925-35158056)
chr4 (363-442)||(54580008-54580087)
chr4 (357-449)||(21945491-21945583)
chr4 (378-449)||(19482656-19482727)
chr4 (318-449)||(34306744-34306874)
chr4 (352-430)||(29205451-29205529)
chr4 (316-447)||(16073385-16073515)
chr4 (357-439)||(4157148-4157229)
chr4 (318-446)||(49431016-49431145)
chr4 (318-446)||(12895214-12895342)
chr4 (357-437)||(38846991-38847071)
chr4 (357-446)||(2361954-2362043)
chr4 (364-449)||(40179622-40179707)
chr4 (378-430)||(11596352-11596404)
chr4 (377-449)||(15029753-15029825)
chr4 (378-449)||(30298934-30299006)
chr4 (378-449)||(30327802-30327874)
chr4 (385-449)||(40481625-40481688)
chr4 (319-437)||(3947702-3947825)
chr4 (341-430)||(8423681-8423770)
chr4 (381-449)||(24543969-24544038)
chr4 (373-445)||(42640518-42640593)
chr4 (380-444)||(6485613-6485677)
chr4 (386-449)||(12708134-12708198)
chr4 (378-445)||(12895116-12895183)
chr4 (378-449)||(16303266-16303337)
chr4 (386-449)||(27706185-27706248)
chr4 (378-437)||(51701258-51701317)
chr4 (391-449)||(14465088-14465146)
chr4 (379-437)||(24613702-24613760)
chr4 (357-418)||(4157455-4157516)
chr4 (318-383)||(5414101-5414166)
chr4 (384-449)||(11651140-11651205)
chr4 (380-449)||(36635312-36635381)
chr4 (357-437)||(31800457-31800537)
chr4 (390-449)||(4383356-4383414)
chr4 (357-408)||(13307906-13307957)
chr4 (379-429)||(28000743-28000794)
chr4 (373-423)||(6879460-6879510)
chr4 (386-447)||(28084511-28084573)
chr4 (318-379)||(18966567-18966628)
chr4 (388-449)||(28720864-28720924)
chr4 (393-430)||(56257940-56257977)
chr4 (386-430)||(37203271-37203315)
chr4 (379-419)||(49041862-49041902)
[»] chr1 (70 HSPs)
chr1 (312-449)||(37598820-37598956)
chr1 (318-445)||(22515827-22515954)
chr1 (318-449)||(46348323-46348454)
chr1 (320-449)||(42359391-42359520)
chr1 (314-437)||(51410024-51410148)
chr1 (318-449)||(38078601-38078732)
chr1 (318-428)||(18337338-18337448)
chr1 (368-449)||(22881606-22881687)
chr1 (341-449)||(1815245-1815353)
chr1 (378-445)||(24577186-24577253)
chr1 (379-449)||(28273089-28273159)
chr1 (319-437)||(40258874-40258992)
chr1 (320-448)||(1486646-1486779)
chr1 (373-449)||(31672890-31672966)
chr1 (378-447)||(113289-113358)
chr1 (335-439)||(18190065-18190169)
chr1 (317-451)||(31015029-31015157)
chr1 (318-446)||(32461393-32461531)
chr1 (318-449)||(47989486-47989627)
chr1 (374-449)||(5927336-5927411)
chr1 (315-446)||(39130704-39130835)
chr1 (368-449)||(13011205-13011287)
chr1 (357-455)||(36878443-36878541)
chr1 (373-446)||(19058851-19058924)
chr1 (316-389)||(25934675-25934748)
chr1 (313-449)||(5944269-5944418)
chr1 (378-437)||(1704992-1705051)
chr1 (378-449)||(18556456-18556527)
chr1 (335-430)||(40181878-40181973)
chr1 (316-449)||(5898204-5898337)
chr1 (357-430)||(11605914-11605987)
chr1 (318-383)||(41597410-41597475)
chr1 (340-445)||(43492456-43492561)
chr1 (393-449)||(398780-398836)
chr1 (378-446)||(6612171-6612239)
chr1 (373-449)||(9103628-9103703)
chr1 (357-429)||(21530697-21530769)
chr1 (373-449)||(35702583-35702659)
chr1 (378-437)||(6332671-6332729)
chr1 (379-430)||(16927186-16927237)
chr1 (386-437)||(32434724-32434775)
chr1 (378-448)||(40917740-40917808)
chr1 (386-449)||(48450595-48450658)
chr1 (393-446)||(7918226-7918279)
chr1 (380-449)||(10572591-10572660)
chr1 (380-437)||(21378578-21378635)
chr1 (380-437)||(23738678-23738735)
chr1 (373-430)||(41877465-41877522)
chr1 (378-434)||(2283669-2283725)
chr1 (378-430)||(9629900-9629952)
chr1 (357-429)||(22907318-22907390)
chr1 (373-429)||(52903257-52903313)
chr1 (378-449)||(6427338-6427409)
chr1 (394-445)||(9828036-9828087)
chr1 (394-445)||(12443476-12443527)
chr1 (373-444)||(13436451-13436522)
chr1 (386-445)||(14359530-14359588)
chr1 (373-408)||(24334700-24334735)
chr1 (379-430)||(27471567-27471618)
chr1 (386-449)||(29144366-29144429)
chr1 (393-448)||(34298425-34298480)
chr1 (319-445)||(10577676-10577802)
chr1 (363-449)||(13997871-13997957)
chr1 (368-449)||(8842704-8842785)
chr1 (378-437)||(17778549-17778605)
chr1 (373-429)||(1864875-1864931)
chr1 (397-449)||(2896140-2896192)
chr1 (386-449)||(6427449-6427515)
chr1 (386-430)||(8010295-8010339)
chr1 (361-431)||(14248836-14248902)
[»] scaffold0053 (1 HSPs)
scaffold0053 (318-449)||(8786-8917)
[»] chr8 (49 HSPs)
chr8 (318-449)||(36450694-36450825)
chr8 (375-449)||(22595982-22596056)
chr8 (336-449)||(31556985-31557097)
chr8 (373-432)||(4948657-4948716)
chr8 (378-449)||(15816129-15816200)
chr8 (315-445)||(5813584-5813714)
chr8 (316-437)||(18407719-18407840)
chr8 (378-439)||(25566839-25566900)
chr8 (373-449)||(20873057-20873133)
chr8 (378-437)||(21465412-21465471)
chr8 (378-449)||(22651964-22652035)
chr8 (320-430)||(3025558-3025668)
chr8 (388-449)||(4673435-4673496)
chr8 (373-450)||(24613508-24613584)
chr8 (380-449)||(29510306-29510375)
chr8 (368-439)||(31514870-31514942)
chr8 (316-428)||(40332200-40332312)
chr8 (319-403)||(43737752-43737836)
chr8 (378-437)||(2572056-2572115)
chr8 (378-449)||(13436964-13437035)
chr8 (374-449)||(18170478-18170553)
chr8 (374-449)||(18634046-18634121)
chr8 (318-429)||(33405324-33405435)
chr8 (387-449)||(30271300-30271362)
chr8 (320-449)||(926730-926859)
chr8 (378-430)||(8342979-8343031)
chr8 (378-437)||(17468508-17468567)
chr8 (347-430)||(20679364-20679447)
chr8 (378-449)||(24669421-24669492)
chr8 (318-389)||(34450961-34451032)
chr8 (373-449)||(22204627-22204705)
chr8 (379-437)||(29447111-29447169)
chr8 (376-430)||(30077385-30077439)
chr8 (318-403)||(3951476-3951561)
chr8 (379-444)||(4298887-4298952)
chr8 (376-449)||(4786336-4786409)
chr8 (373-430)||(8343323-8343380)
chr8 (384-449)||(41838129-41838194)
chr8 (373-445)||(13844591-13844663)
chr8 (381-449)||(25192350-25192418)
chr8 (386-449)||(22197750-22197813)
chr8 (386-429)||(41831948-41831991)
chr8 (380-430)||(7442852-7442902)
chr8 (411-445)||(24196630-24196664)
chr8 (372-430)||(34897092-34897150)
chr8 (377-438)||(44694790-44694851)
chr8 (318-382)||(6065586-6065650)
chr8 (374-430)||(12606825-12606881)
chr8 (373-445)||(31236572-31236644)
[»] scaffold0361 (1 HSPs)
scaffold0361 (318-445)||(14522-14646)
[»] scaffold0793 (1 HSPs)
scaffold0793 (318-437)||(4821-4943)
[»] scaffold0652 (1 HSPs)
scaffold0652 (319-449)||(403-533)
[»] scaffold0122 (1 HSPs)
scaffold0122 (364-445)||(8002-8082)
[»] scaffold0103 (1 HSPs)
scaffold0103 (384-449)||(51799-51864)
[»] scaffold0011 (1 HSPs)
scaffold0011 (379-444)||(17750-17815)
[»] scaffold0306 (1 HSPs)
scaffold0306 (320-449)||(13388-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (320-449)||(21804-21939)
[»] scaffold0018 (1 HSPs)
scaffold0018 (386-449)||(178826-178890)
[»] scaffold0722 (1 HSPs)
scaffold0722 (340-437)||(6994-7091)
[»] scaffold0223 (1 HSPs)
scaffold0223 (386-446)||(20163-20223)
[»] scaffold0083 (1 HSPs)
scaffold0083 (318-408)||(45470-45560)
[»] scaffold0246 (1 HSPs)
scaffold0246 (385-449)||(19564-19627)
[»] scaffold0050 (1 HSPs)
scaffold0050 (357-429)||(70286-70358)
[»] scaffold0027 (1 HSPs)
scaffold0027 (378-446)||(46673-46741)
[»] scaffold0227 (1 HSPs)
scaffold0227 (383-445)||(7316-7378)
[»] scaffold0697 (1 HSPs)
scaffold0697 (357-429)||(1652-1724)
[»] scaffold0025 (1 HSPs)
scaffold0025 (378-449)||(23757-23829)
[»] scaffold0450 (1 HSPs)
scaffold0450 (378-449)||(8635-8706)
[»] scaffold0066 (1 HSPs)
scaffold0066 (390-445)||(33375-33430)
[»] scaffold0004 (3 HSPs)
scaffold0004 (386-449)||(92795-92858)
scaffold0004 (379-449)||(123613-123686)
scaffold0004 (319-384)||(92875-92940)
[»] scaffold0003 (2 HSPs)
scaffold0003 (378-449)||(241582-241653)
scaffold0003 (318-389)||(241653-241724)
[»] scaffold0036 (1 HSPs)
scaffold0036 (378-431)||(9747-9800)
[»] scaffold0021 (1 HSPs)
scaffold0021 (381-446)||(130473-130538)
[»] scaffold0380 (1 HSPs)
scaffold0380 (316-376)||(8662-8722)
[»] scaffold0022 (1 HSPs)
scaffold0022 (357-429)||(90851-90923)
[»] scaffold0171 (1 HSPs)
scaffold0171 (378-449)||(23408-23479)
[»] scaffold0136 (1 HSPs)
scaffold0136 (386-429)||(3857-3900)
[»] scaffold0475 (1 HSPs)
scaffold0475 (317-407)||(3338-3428)
[»] scaffold0019 (2 HSPs)
scaffold0019 (386-449)||(71711-71776)
scaffold0019 (315-389)||(71784-71858)
[»] scaffold0049 (1 HSPs)
scaffold0049 (373-430)||(63780-63837)


Alignment Details
Target: chr7 (Bit Score: 106; Significance: 7e-53; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 181 - 294
Target Start/End: Original strand, 7196862 - 7196975
Alignment:
Q  181 ttaagaggacacctcttcaaatgttgttgtctaaatcaacaattttgagcgggaagataatcattgttagcggaccttttcaacatggttccaaacggcc 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7196862 ttaagaggacacctcttcaaatgttgttgtctaaatcaacaattttgagctggaagataatcagtgttagcggaccttttcaacatggttccaaacggcc 7196961  T
Q  281 actataacttttaa 294  Q
    ||||||||||||||    
T  7196962 actataacttttaa 7196975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 291 - 446
Target Start/End: Original strand, 7197210 - 7197365
Alignment:
Q  291 ttaaatagacatcgtattccctttaacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacact 390  Q
    |||||||||||||||||| |||||||| ||||||||||||| ||| || ||| |||| ||||||| ||||| |||||||||||||||||||||| |||||    
T  7197210 ttaaatagacatcgtattacctttaacatatgaagcacggacatttctcggaataagagtatcccggtgtcggacatgtgttgtgtccgacaccgacact 7197309  T
Q  391 tgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||| |||||||||||||||||| |||||||||| |||||| ||||||||    
T  7197310 tgtaattacattgaattaaatgatttttttaaattattagctgtgtcggcgtgtca 7197365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 25482021 - 25481893
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||||| || ||| ||||||||| |  |  |||| ||||  | | ||||||||||||||||||||||||||||||||||||  |||||||    
T  25482021 ctatgaagcacggatactctttgaattaagcgtgtttcaatgtcggacacatatcgtgtccgacaccaacacttgtaattacactgaattatgtgatttt 25481922  T
Q  418 ttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||||||||| |||||| ||||||||    
T  25481921 ttcaaattattagctgtgtcggcgtgtca 25481893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 315 - 449
Target Start/End: Original strand, 5409768 - 5409907
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaa 409  Q
    ||||||||||||||||| | |||| |||||| |||| |||| ||||| |||| |||| ||||||||||| |     |||||||||||| ||||||||||     
T  5409768 aacctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttgtaattgcactgaattat 5409867  T
Q  410 atgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
     |||||||||||||||||||| ||| ||||||||||||||    
T  5409868 gtgattttttcaaattattagctgtatcagcgtgtcagtg 5409907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 314 - 439
Target Start/End: Complemental strand, 9778628 - 9778498
Alignment:
Q  314 taacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaatta 408  Q
    |||||||||||||||||| | ||||||||||| |||| |||| ||||| |||| |||||||||||||||| |     ||||||||||||| |||||||||    
T  9778628 taacctatgaagcacggacactccttggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacacgacaccgacacttgtaattatactgaatta 9778529  T
Q  409 aatgattttttcaaattattagttgtgtcag 439  Q
      ||||||||||||||||| || ||||||||    
T  9778528 tgtgattttttcaaattatcagctgtgtcag 9778498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 7058485 - 7058424
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  7058485 cgacaccaacacttgtaattacactgaattacatgattttttcaaattattagttgtatcag 7058424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 21880271 - 21880159
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | | || |||||| |||| |||  ||||| ||||||||| |||||||||||| |||||||||||||||||||||||  | |||||    
T  21880271 ctatgaagcacggacacttctcggattaggcgtgtcctggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtaatttt 21880172  T
Q  418 ttcaaattattag 430  Q
     ||||||||||||    
T  21880171 ctcaaattattag 21880159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 338 - 437
Target Start/End: Complemental strand, 8234245 - 8234146
Alignment:
Q  338 ttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||||| |||| || | ||||| ||||||||| ||||||||||||  ||||||||| ||||||||||||  | |||||||||||||||||||||||||    
T  8234245 ttggattaggcgtgtctcggtgtcggacatgtgtcgtgtccgacaccggcacttgtaactacactgaattatgttattttttcaaattattagttgtgtc 8234146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 20549909 - 20549779
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||||||||||  | |||| |||||| |||| || |  |||| |||||||||||||||||||||| |||| | ||||||||||||||||  |||||||     
T  20549909 tatgaagcacgggcactcctcggattaggcgtgtctcattgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattacgtgattttc 20549810  T
Q  419 tcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||  ||||| | |||||||||    
T  20549809 tcaaattattagcggtgtcggtgtgtcagtg 20549779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 316 - 449
Target Start/End: Complemental strand, 33994333 - 33994200
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    ||||||||| |||| | | ||||||||||| |||| || | ||||  ||||||||| ||||| |||||| |||||||||||| ||||||||||  |||      
T  33994333 acctatgaaacacgaacactccttggattaggcgtgtctcggtgttggacatgtgtcgtgtctgacaccgacacttgtaattgcactgaattatgtgacc 33994234  T
Q  416 ttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| |||||| ||| |||||||||||    
T  33994233 ttttcaaattagtagttgcgtcggcgtgtcagtg 33994200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 26 - 86
Target Start/End: Original strand, 7196661 - 7196720
Alignment:
Q  26 taaactataatatgatcttgcatgaacatgaacataaatgtagccccaagaagacaagtta 86  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  7196661 taaactataatatgatcttgcatgcacatgaacataaatgtag-cccaagaagacaagtta 7196720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 24339701 - 24339633
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||    
T  24339701 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 24339633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 40287351 - 40287423
Alignment:
Q  372 tgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||| ||| ||||||||||||||||||||| | ||||||||||||||||||| |||||||| |||||||    
T  40287351 tgtgtccgataccgacacttgtaattacactgaat-atatgattttttcaaattattcgttgtgtcggcgtgtc 40287423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 446
Target Start/End: Original strand, 11665448 - 11665508
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||| |||||| |||||||||  ||||||||||||||||||||||||||||||||||||    
T  11665448 acacttataattagactgaattatgtgattttttcaaattattagttgtgtcagcgtgtca 11665508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 449
Target Start/End: Complemental strand, 15680929 - 15680797
Alignment:
Q  317 cctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattt 416  Q
    ||||||||||||||| | |||| | ||||  ||| || | ||||| |||| |||| |||||||||||| |||||| |||||||||| |||||  ||||||    
T  15680929 cctatgaagcacggacactcctcgaattagacgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttataattacactaaattatgtgattt 15680830  T
Q  417 tttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||  ||||||||| | |||| |||||||||||    
T  15680829 tttttaattattagctatgtcggcgtgtcagtg 15680797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 3991383 - 3991324
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| ||||||||||||| |||||||||  |||||||||||||||||||||||||||    
T  3991383 cgacaccgacacttgtaattatactgaattatgtgattttttcaaattattagttgtgtc 3991324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 9408334 - 9408405
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||||| |||||  ||||||||||||||||||| ||||||| | |||||||||    
T  9408334 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaattgtgtcggtgtgtcagtg 9408405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 450
Target Start/End: Original strand, 11272586 - 11272660
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatg--attttttcaaattattagttgtgtcagcgtgtcagtgc 450  Q
    ||||||| ||||||||||||||||||||||| |||  ||||||||||||||| ||||||||| |||| |||||||    
T  11272586 cgacaccgacacttgtaattacactgaattatatgtgattttttcaaattatcagttgtgtcggcgtctcagtgc 11272660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 11831491 - 11831432
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| || ||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  11831491 cgacacgaatacttgtaattacactaaattatatgattttttcaaattattagttgtgtc 11831432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 24105797 - 24105666
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||  | | |||| || ||| |||| |||| ||||| ||||  ||||||| ||||| || ||||||||||||||||||||| |    |||||    
T  24105797 ctatgaagcacaaacactcctcgggttaggcgtgtcccggtgtcggacacatgttgtgcccgactccgacacttgtaattacactgaatcatgcaatttt 24105698  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| |||||| |||||||||||    
T  24105697 ttcaaattattagctgtgtcggcgtgtcagtg 24105666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 27945100 - 27945029
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  | ||||| ||||||||||||| ||||| |||||||||||    
T  27945100 cgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtg 27945029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 21864927 - 21864806
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga--tt 415  Q
    ||||||||||| || | |||| | ||||  ||| |||| ||||| |||| |||| |||||||||| | ||||||||||||||||| ||||| ||||  ||    
T  21864927 ctatgaagcacagacactcctcgaattagacgtgtcccggtgtcggacacgtgtcgtgtccgacagcgacacttgtaattacactaaattatatgatttt 21864828  T
Q  416 ttttcaaattattagttgtgtc 437  Q
    ||||||||||||||| ||||||    
T  21864827 ttttcaaattattagctgtgtc 21864806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 11061071 - 11061147
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||| ||||||||||||| ||| |||||  |||||||||||||||||||| |||||| | |||||||||    
T  11061071 gtgtctgacaccgacacttgtaattatactaaattatgtgattttttcaaattattagctgtgtcggtgtgtcagtg 11061147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 379 - 439
Target Start/End: Complemental strand, 13300468 - 13300408
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||| | ||| ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  13300468 gacaccgagactggtaattacactgaattatatgattttttcaaattattagttatgtcag 13300408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 43027404 - 43027540
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtc-----cgacaccaacacttgtaattacactgaattaaatg 412  Q
    |||||||||||||| | || | |||||| |||| |||| ||||| |||| |||| |||||     ||||||| ||||||||| |||||||| ||||  ||    
T  43027404 ctatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacacgacaccgacacttgtatttacactgcattatgtg 43027503  T
Q  413 attttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||| || |||  ||||||||||    
T  43027504 attttttcaaattattagctgggtcgccgtgtcagtg 43027540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 323 - 449
Target Start/End: Complemental strand, 13770810 - 13770679
Alignment:
Q  323 aagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||| | || | |||||| |||| | || ||||| |||| |||||||||||||||| |     |||||||||||||||||||||||  | |||||    
T  13770810 aagcacggacactcttcggattaggcgtgttccggtgtcggacacgtgttgtgtccgacacgacaacgacacttgtaattacactgaattatgtaatttt 13770711  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    || |||||||||| |||||| |||| ||||||    
T  13770710 tttaaattattagctgtgtcggcgtatcagtg 13770679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 7438764 - 7438694
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| ||||||||||||||| |||||||  |||||||||||||||||||  |||||| || ||||||||    
T  7438764 gacaccgacacttgtaattacattgaattatgtgattttttcaaattattaactgtgtcggcatgtcagtg 7438694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 26033469 - 26033522
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||||||||||||||||||||  |||||||||||||||||||| || |||||    
T  26033469 acacttgtaattacactgaattatgtgattttttcaaattattagctgcgtcag 26033522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 6630927 - 6630983
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| ||| ||| ||||||||||||| ||||| |||||||||||    
T  6630927 taattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtg 6630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 11890919 - 11890970
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||| |||||  |||||||||||||||| ||||||||||||||||||||    
T  11890919 cgacacctacactcataattacactgaattatatgattttttcaaattatta 11890970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 18215186 - 18215257
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||| ||||||| ||||  |||||||||||||||||||| || ||| |||||| ||||    
T  18215186 cgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtg 18215257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 25822714 - 25822647
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| ||||||||||||||||||||||      |||||||||||||||||||||||| |||||||    
T  25822714 cgacaccgacacttgtaattacactgaattgtgattttttttcaaattattagttgtgtcggcgtgtc 25822647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 373 - 444
Target Start/End: Complemental strand, 28155634 - 28155563
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    |||||||||||| |||||||||||||||| ||||||  | ||||| ||||||||||||  ||||| ||||||    
T  28155634 gtgtccgacaccgacacttgtaattacaccgaattatgtaattttctcaaattattagcggtgtcggcgtgt 28155563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 32094020 - 32094079
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgt 436  Q
    ||||||| ||| |||||||||||||||||||  ||| |||||||||||||||||||||||    
T  32094020 cgacaccgacatttgtaattacactgaattatgtgatttttttcaaattattagttgtgt 32094079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 394 - 449
Target Start/End: Complemental strand, 35862007 - 35861952
Alignment:
Q  394 aattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  35862007 aattacattgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtg 35861952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 449
Target Start/End: Complemental strand, 41020607 - 41020484
Alignment:
Q  326 cacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaatt 425  Q
    |||||| |||| ||||||||  ||| |||| |||| ||| |||||| |||| | ||||| || | | |||||||||| |||||  ||||||||  |||||    
T  41020607 cacggacattctttggattagacgtgtcccggtgttagatatgtgtcgtgttcaacaccgacgcatataattacactaaattatgtgatttttgtaaatt 41020508  T
Q  426 attagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||  ||||||||||    
T  41020507 attagttgtgtcgacgtgtcagtg 41020484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 439
Target Start/End: Complemental strand, 19213867 - 19213801
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||||||||| ||||||||| |||||||| ||||  ||||||||| ||||||||||  |||||||    
T  19213867 gtgtccgacaccgacacttgtatttacactgcattatgtgattttttaaaattattagcagtgtcag 19213801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 26733378 - 26733292
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| || |||||||||||| |||| | |||||| |||||||||  ||||||| ||||||||||||  |||||  ||||||||||    
T  26733378 gacatgcgtcgtgtccgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtg 26733292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 340 - 449
Target Start/End: Complemental strand, 5835344 - 5835235
Alignment:
Q  340 ggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||||||| |||| || |||||||  |||  |||| |||||| |||| | ||||||||||||||||  | ||||| ||||| ||||||| ||||| |    
T  5835344 ggattaagcgtgtcccggtatcagacacatgtcatgtctgacaccgacacatataattacactgaattatgttattttctcaaactattagtggtgtcgg 5835245  T
Q  440 cgtgtcagtg 449  Q
    ||| ||||||    
T  5835244 cgtatcagtg 5835235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 598327 - 598215
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | | || |||||| |||| |||| ||||| |||| |||| ||||| |||||| ||||||  ||||||| | |||||  |||||||    
T  598327 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtctgacaccgacacttacaattacatttaattacgtgatttt 598228  T
Q  418 ttcaaattattag 430  Q
     | ||||||||||    
T  598227 cttaaattattag 598215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 18039058 - 18039006
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattatta 429  Q
    ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||    
T  18039058 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattatta 18039006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 21560562 - 21560486
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgatttt-----ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  |||||||     ||||||||||||| ||| || |||||||||||    
T  21560562 cgacaccgacacttgtaattacactgaattatgtgattttttttcttcaaattattagctgtatcggcgtgtcagtg 21560486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 22868086 - 22868030
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||  ||||||| ||| ||||||||| ||||| |||||||||||    
T  22868086 taattacactgaattatgtgattttctcatattattagtggtgtcggcgtgtcagtg 22868030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 449
Target Start/End: Original strand, 42720881 - 42720961
Alignment:
Q  369 tgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| |||||  |||| | |||||||| | |||||  ||||||||||||||||||||  |||||| ||||||||||    
T  42720881 tgttgtgtcagacactgacacatataattacatttaattatgtgattttttcaaattattagcggtgtcaacgtgtcagtg 42720961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 13557750 - 13557815
Alignment:
Q  387 cacttgtaattacactgaattaaatga---ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||  |||   |||||| |||||||||||| |||| |||||||||||    
T  13557750 cacttgtaattacactgaattatgtgattttttttttaaattattagttttgtcggcgtgtcagtg 13557815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 19992060 - 19992001
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| |||||| ||||||||||||| ||  ||||||| |||||||||||| ||||||    
T  19992060 cgacaccgacacttataattacactgaaatatgtgattttctcaaattattagctgtgtc 19992001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 449
Target Start/End: Complemental strand, 32308163 - 32308108
Alignment:
Q  394 aattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||  ||||||| ||||||||||||  ||||| |||||||||||    
T  32308163 aattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtg 32308108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 358 - 437
Target Start/End: Original strand, 7973103 - 7973184
Alignment:
Q  358 tgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga--ttttttcaaattattagttgtgtc 437  Q
    |||| ||||||||| |||||  ||||||||| ||||||||||| | |||||  |||  |||||||||||||||| |||||||    
T  7973103 tgtcggacatgtgtcgtgtctcacaccaacatttgtaattacattaaattatgtgattttttttcaaattattaattgtgtc 7973184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 455
Target Start/End: Complemental strand, 21826337 - 21826255
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcctatg 455  Q
    |||||||||||| |||| | | |||| ||||| |||  ||||||||| ||||||||||| ||||| |||||| |||| |||||    
T  21826337 gtgtccgacaccgacacatattattagactgagttatgtgatttttttaaattattagtcgtgtcggcgtgttagtgtctatg 21826255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 23128678 - 23128728
Alignment:
Q  395 attacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||| ||| |||| ||||||||||| | |||||||||||||    
T  23128678 attacactgaattatatggttttctcaaattattattggtgtcagcgtgtc 23128728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 8090020 - 8090093
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||||||||||||| |  | |||||||||||||  |||| || |||||||| |||| ||||| ||||||||    
T  8090020 gtgtccgacaccaacacatacagttacactgaattacgtgatattctcaaattactagtggtgtctgcgtgtca 8090093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 372 - 429
Target Start/End: Complemental strand, 38143288 - 38143231
Alignment:
Q  372 tgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||| ||||||||||| | |||||||| | |||||  |||||||||||||||||||    
T  38143288 tgtgtctgacaccaacacatataattacattaaattatgtgattttttcaaattatta 38143231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 1401089 - 1401013
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||| | |||| ||||||||||||||||  ||| ||| ||||||||||||   | ||||||||||||||    
T  1401089 gtgtcggacaccgatacttataattacactgaattatgtgagtttctcaaattattagcgatatcagcgtgtcagtg 1401013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 18013089 - 18013145
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||  | ||||||| ||||||||||| |||||||  ||||||||    
T  18013089 taattacactgaattatgtaatttttttaaattattagtagtgtcagaatgtcagtg 18013145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 18212973 - 18213105
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||||| || | |||| |||| | |||| |||| |||||||| | | || |||||||||||| |||| | |||||||||| |||||  |||||||    
T  18212973 ctatgaagcacagacactcctcggataaggcgtgtccccgtgtcagaaaggggtcgtgtccgacaccgacacatataattacactaaattatgtgatttt 18213072  T
Q  418 -ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
     |  |||  |||||||||||| |||| ||||||    
T  18213073 ctaaaaaaaattagttgtgtcggcgtatcagtg 18213105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 29763187 - 29763251
Alignment:
Q  391 tgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcctatg 455  Q
    ||||| |||||| |||||  ||||||||||||||||| ||||||||  | ||||||||| |||||    
T  29763187 tgtaactacacttaattatgtgattttttcaaattataagttgtgttggtgtgtcagtgtctatg 29763251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 321 - 417
Target Start/End: Complemental strand, 39138560 - 39138464
Alignment:
Q  321 tgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||| |||| || | |||| | |||| |||| |||| |||||||| | |||||||||||| |||  | ||||||||||||||||  |||||||    
T  39138560 tgaagcacagatactcttgggataaggcgtgtccccgtgttagacatgtatcgtgtccgacaccgacatatataattacactgaattatgtgatttt 39138464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 72)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 34595253 - 34595125
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| | || |||| |||||||||| |||| |||||||||||| |||||||||||||||||||||||  |||||||    
T  34595253 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 34595154  T
Q  418 ttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||||||||| ||||||||    
T  34595153 ttcaaattattagttgtgtcggcgtgtca 34595125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 8776963 - 8777044
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||||||    
T  8776963 gtgtcgtgtccgacaccaacacttgtaattacactgaattttgtgattttttcaaattattagttgtgtcggcgtgtcagtg 8777044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 358 - 448
Target Start/End: Original strand, 7977810 - 7977900
Alignment:
Q  358 tgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    |||| ||||| |||||||||||||||| |||||||||||||||||||||||  | |||||||||||||||||| |||||| ||||||||||    
T  7977810 tgtcggacatatgttgtgtccgacaccgacacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgtcagt 7977900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 17841530 - 17841660
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||||||||||| | |||| |||||| |||| || | ||||| ||||  ||| ||||||||||||  |||||||||||||||| |||||  ||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatgtcgtgtccgacaccgtcacttgtaattacactaaattatgtgattttt 17841629  T
Q  419 tcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| |||||| |||||||||||    
T  17841630 tcaaattattagctgtgtcggcgtgtcagtg 17841660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 321 - 445
Target Start/End: Original strand, 32978842 - 32978967
Alignment:
Q  321 tgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatg-atttttt 419  Q
    ||||||||||| | |||||||||||  ||| |||| ||||| ||||||||| |||||||||||| ||||||||||||||||| |||||  ||  ||||||    
T  32978842 tgaagcacggacactccttggattagacgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacacttaattatgtgtttttttt 32978941  T
Q  420 caaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||| |||||| |||||||    
T  32978942 caaattattagctgtgtcggcgtgtc 32978967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 316 - 446
Target Start/End: Complemental strand, 4878063 - 4877933
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga-t 414  Q
    |||||||||||||||| | |||| |||||| |||| ||| |||||| ||||||||| |||||||||||| ||||||||||||| ||| |||||  ||| |    
T  4878063 acctatgaagcacggacactcctcggattaggcgtgtcc-tgtgtcggacatgtgtcgtgtccgacaccgacacttgtaattatacttaattatgtgact 4877965  T
Q  415 tttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||||| |||||| | ||||||    
T  4877964 tttttcaaattattagctgtgtcggtgtgtca 4877933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 28152217 - 28152087
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||| | | |||| |||||| || | |||| ||||| |||| |||| |||||||||||| |||||||||||||||||||||||  ||| |||    
T  28152217 ctatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga-ttt 28152119  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| | |||| |||||||||||    
T  28152118 ttcaaattattagctttgtcggcgtgtcagtg 28152087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 16766827 - 16766685
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac-----------ttgtaattacactgaat 406  Q
    |||||||||||||| |||| | |||||| |||| |||| ||||| |||| ||||||||||||||||| ||||           |||||||||||||||||    
T  16766827 ctatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 16766728  T
Q  407 taaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||  |||||||||||||||||||| |||||| |||||||||||    
T  16766727 tatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 16766685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 10770674 - 10770745
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||  |||||||||||    
T  10770674 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgttggcgtgtcagtg 10770745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 449
Target Start/End: Complemental strand, 12696446 - 12696312
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaatgat 414  Q
    ||||||||| || | ||||||||| | | || |||| |||||||||| |||| ||||||||||| |     |||||||||||||||||||||||  | ||    
T  12696446 atgaagcacagacactccttggataaggtgtgtcccggtgtcagacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgtaat 12696347  T
Q  415 tttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||| |||||| |||||||||||    
T  12696346 tttttcaaattattagctgtgtcggcgtgtcagtg 12696312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 338 - 447
Target Start/End: Original strand, 853819 - 853928
Alignment:
Q  338 ttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||||| |||| || || |||| ||||  ||| || ||||||||| |||||||||||| |||| |||||  |||||||||||||||||||||||||||    
T  853819 ttggattaggcgtgtctctatgtcggacacatgtcgtatccgacaccgacacttgtaattgcacttaattatgtgattttttcaaattattagttgtgtc 853918  T
Q  438 agcgtgtcag 447  Q
     |||||||||    
T  853919 ggcgtgtcag 853928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 7265535 - 7265664
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    ||||||||||||   |||| |||||| || ||| || ||||| ||||||| |||||||||||||| |||| | ||||||||||||||||  ||||||| |    
T  7265535 atgaagcacggacgctcctcggattaggcatattccggtgtcggacatgtattgtgtccgacaccgacacatataattacactgaattatgtgattttct 7265634  T
Q  420 caaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||  ||||  |||||||||||    
T  7265635 caaattattagcggtgttggcgtgtcagtg 7265664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 16833365 - 16833296
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||||||||||||||||| ||  ||||||||||||||||||||||||||| |||||||||||    
T  16833365 acaccgacacttgtaattacactgaagtatgtgattttttcaaattattagttgtgtcggcgtgtcagtg 16833296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 377 - 449
Target Start/End: Original strand, 7801155 - 7801227
Alignment:
Q  377 ccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||| |||||||||||||| ||||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  7801155 ccgacaccgacacttgtaattacgctgaattatgtgattttttcaaattattagttgtgtcggcgtgttagtg 7801227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 7938180 - 7938104
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||| |||||| |||||||||| ||||| ||||||||||||||||||||| |||||| |||||||||||    
T  7938180 gtgtcggacaccgacacttataattacactaaattatatgattttttcaaattattagctgtgtcggcgtgtcagtg 7938104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 1681809 - 1681746
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| ||||    
T  1681809 acacttgtaattacactgaattacgtgattttttcaaattattagttgtgtcggcgtgttagtg 1681746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 8365519 - 8365590
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||| ||||||  |||| |||||||||||||||||||||| |||||||||||    
T  8365519 cgacaccgacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtg 8365590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 439
Target Start/End: Complemental strand, 28715416 - 28715293
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||||| | | | || | |||| |||| |||| |||||  ||| |||| |||||||||||| |||||||||||||||||||||||  | |||    
T  28715416 acctatgaagcacgtacacttctcgaattaggcgtgtcccggtgtcgaacacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtcatt 28715317  T
Q  416 ttttcaaattattagttgtgtcag 439  Q
    |||||||||||||||  |||||||    
T  28715316 ttttcaaattattagccgtgtcag 28715293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 446
Target Start/End: Original strand, 33001227 - 33001357
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||||  | | || |||||||| ||||||  | |||||||||| |||| |||||||||||| |||| | |||||||| | |||||  |||||    
T  33001227 acctatgaagcacaaacactctttggattaggcgtatttcggtgtcagacacgtgtcgtgtccgacaccgacacatataattacatttaattatgtgatt 33001326  T
Q  416 ttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||||  ||||| ||||||||    
T  33001327 ttttcaaattattagcagtgtcggcgtgtca 33001357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 455
Target Start/End: Original strand, 24115847 - 24115924
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcctatg 455  Q
    |||||||||||  | |||||| | |||||||  ||||||||| |||||||||||||||||||||||||||||||||||    
T  24115847 cgacaccaacatatataattatattgaattatgtgattttttgaaattattagttgtgtcagcgtgtcagtgcctatg 24115924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 426509 - 426585
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| ||||||||||||||| | |||||  |||||||||||||||||||  |||||| |||||||||||    
T  426509 gtgtccgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtg 426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 6898276 - 6898352
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| ||||||||||||||||| |||||  | |||| |||||||||||||  |||||||||||||||||    
T  6898276 gtgtccgacaccgacacttgtaattacacttaattatgtaatttgttcaaattattagacgtgtcagcgtgtcagtg 6898352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 17302608 - 17302544
Alignment:
Q  386 acacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||| |||||||  ||||||||| ||||||||||||||||||||||||||||||    
T  17302608 acacttgtaattacattgaattatgtgatttttttcaaattattagttgtgtcagcgtgtcagtg 17302544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 9107370 - 9107441
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||| ||||    
T  9107370 cgacaccgacacttgtaattacactgaattttgtgattttttcaaattattagctgtgtcggcgtgttagtg 9107441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 439
Target Start/End: Original strand, 32511646 - 32511727
Alignment:
Q  358 tgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||||||| ||| || |||||||||||||||| ||||||||||||||||  ||||||| | ||||||||||  |||||||    
T  32511646 tgtcagacatatgtcgtatccgacaccaacacttataattacactgaattatgtgattttcttaaattattagcggtgtcag 32511727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 455
Target Start/End: Original strand, 17327588 - 17327732
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaa 410  Q
    |||||||||||||||| | |||| |||||| |||| ||||||||||||||| |||| ||||||||||| |     |||| | || ||||||| |||||      
T  17327588 acctatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacacgtgtcgtgtccgacacgacactgacacatatagttacactaaattatg 17327687  T
Q  411 tgattttttcaaattattagttgtgtcagcgtgtcagtgcctatg 455  Q
    ||||||| ||||| | ||||||||||| |||| ||| || |||||    
T  17327688 tgattttctcaaaatcttagttgtgtcggcgtatcactgtctatg 17327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 364 - 448
Target Start/End: Complemental strand, 19040425 - 19040341
Alignment:
Q  364 acatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    |||||||| |||||||||||  |||| | ||||||||||||||||  ||||||| ||||||||||||  ||||| ||||||||||    
T  19040425 acatgtgtcgtgtccgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagt 19040341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 386 - 434
Target Start/End: Complemental strand, 31384971 - 31384923
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgt 434  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||||    
T  31384971 acacttgtaattacactgaattatgtgattttttcaaattattagttgt 31384923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 3398677 - 3398607
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| | |||| |||||||||||||||| ||||||||| ||||||||||| |||||| |||||||||||    
T  3398677 cgacaccgatacttataattacactgaattatatgattttt-caaattattagctgtgtcggcgtgtcagtg 3398607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 449
Target Start/End: Original strand, 7996325 - 7996449
Alignment:
Q  321 tgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttc 420  Q
    ||||||||||| | ||||||||||| |||| |||| |||| ||||| |||| |    ||||||| || | | |||||||||||||||| |||||||| ||    
T  7996325 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttctc 7996420  T
Q  421 aaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||  ||||| || ||||||||    
T  7996421 aaattattagcagtgtcggcatgtcagtg 7996449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 321 - 449
Target Start/End: Complemental strand, 8022476 - 8022352
Alignment:
Q  321 tgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttc 420  Q
    ||||||||||| | ||||||||||| |||| |||| |||| ||||| |||| |    ||||||| || | | |||||||||||||||| |||||||| ||    
T  8022476 tgaagcacggagactccttggattaggcgtgtccccgtgttagacacgtgtcg----cgacaccgacgcatataattacactgaattatatgattttctc 8022381  T
Q  421 aaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||  ||||| || ||||||||    
T  8022380 aaattattagcagtgtcggcatgtcagtg 8022352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 9658998 - 9658867
Alignment:
Q  319 tatgaagcacggatattccttgga-ttaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||||||| | |||||||| ||| |||| | || |||||||||| |||| |||||  ||||| |||  | ||||||||||||||||  |||||||    
T  9658998 tatgaagcacggacactccttggaattaggcgtgttccggtgtcagacacgtgtcgtgtctaacaccgacaaatataattacactgaattatgtgatttt 9658899  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
     | ||||||||||  ||||| |||||||||||    
T  9658898 cttaaattattagcggtgtcggcgtgtcagtg 9658867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 31959210 - 31959147
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||| ||||  |||||||||||||||||||| |||| | |||||||||||    
T  31959210 acacttgtaattacactgcattatgtgattttttcaaattattagctgtgacggcgtgtcagtg 31959147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 18367969 - 18367895
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    ||||||||||||||||| | ||||||||| | |||| |||| ||||||||||||||| ||||| |||||| ||||    
T  18367969 aacctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacatgtgtcgtgtctgacaccgacac 18367895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 403859 - 403915
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||| ||||||||| ||||||| |||||  |||||||||||||||||||    
T  403859 gtgtccgacaccgacacttgtagttacactaaattatgtgattttttcaaattatta 403915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 5970108 - 5970159
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||| ||| |||||||||||||||||||  |||||||||||||||||||    
T  5970108 cgacacccacatttgtaattacactgaattatgtgattttttcaaattatta 5970159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 7930364 - 7930293
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||| |||| |||| |||||  ||||||||||||||||||| ||||||| || ||||||||    
T  7930364 cgacaccgacacttgaaatttcactaaattatgtgattttttcaaattattaattgtgtcggcatgtcagtg 7930293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 323 - 430
Target Start/End: Original strand, 12627522 - 12627629
Alignment:
Q  323 aagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaa 422  Q
    |||||| |||||| || |||||| | || || | ||||| ||||||||| |||||||||| | |||| | | ||||||||||||||  |||||||||||     
T  12627522 aagcactgatatttctcggattaggagtgtctcggtgtcggacatgtgtggtgtccgacatcgacacatattattacactgaattatgtgattttttcac 12627621  T
Q  423 attattag 430  Q
    ||||||||    
T  12627622 attattag 12627629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 13360313 - 13360431
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | || | |||||| |||| || | ||||| ||||| ||||||||| |||||| | || | ||||||||||||||||  |||||||    
T  13360313 ctatgaagcacggacactcttcggattaggcgtgtctcagtgtcggacat-tgttgtgtctgacaccgaaacatataattacactgaattatgtgatttt 13360411  T
Q  418 ttcaaattattagttgtgtc 437  Q
     |||||||| |||| |||||    
T  13360412 ctcaaattactagtggtgtc 13360431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 9522948 - 9522898
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||| |||||||||||||||||||||||  ||||||||| ||||||||||    
T  9522948 acaccgacacttgtaattacactgaattatgtgatttttttaaattattag 9522898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 427
Target Start/End: Original strand, 13364684 - 13364754
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattat 427  Q
    ||||||||||||| | |||||| ||||| |||| | | |||||||||||||| |||||||| |||||||||    
T  13364684 gtgtcagacatgtatcgtgtccaacaccgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 15489733 - 15489791
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| ||||||||||||||| ||||||   | |||||||||||||||||||||||||    
T  15489733 gacaccgacacttgtaattacattgaattgtgtaattttttcaaattattagttgtgtc 15489791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 445
Target Start/End: Complemental strand, 23771660 - 23771571
Alignment:
Q  355 ctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| ||||  ||| |||||||||||| ||| |||||||||||||||| || || ||||||| |||||||||  |||||| |||||||    
T  23771660 ctgtgtcggacacatgtcgtgtccgacaccgacatttgtaattacactgaagtatataatttttt-aaattattaactgtgtcggcgtgtc 23771571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 439
Target Start/End: Original strand, 34225824 - 34225870
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||||||||||||   ||||||||||||||||||||||||||||    
T  34225824 taattacactgaattatgcgattttttcaaattattagttgtgtcag 34225870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 377 - 445
Target Start/End: Complemental strand, 3209442 - 3209373
Alignment:
Q  377 ccgacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtc 445  Q
    |||||||| ||||||||||| ||||| |||||  ||||||||| ||||||||||| |||||| |||||||    
T  3209442 ccgacaccgacacttgtaataacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtc 3209373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 5626686 - 5626767
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||||||||||| |||| | || |||||||||| ||| ||||||| | |||  |||||||||||| |||||||||||    
T  5626686 gtgtcgtgtccgacaccgacacatatatttacactgaactaagtgattttctaaaaaaattagttgtgtcggcgtgtcagtg 5626767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 429
Target Start/End: Original strand, 6327516 - 6327569
Alignment:
Q  376 tccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||| | ||||||||||||||||| ||||| || |||||||||||||||||    
T  6327516 tccgacatcgacacttgtaattacacttaattatataattttttcaaattatta 6327569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 316 - 389
Target Start/End: Original strand, 10339052 - 10339125
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||||| | ||||  ||||| |||| |||| ||||| ||||||||| |||||||||||| ||||    
T  10339052 acctatgaagcacggacactcctccgattaggcgtgtcccagtgtcggacatgtgtcgtgtccgacaccgacac 10339125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 386 - 451
Target Start/End: Original strand, 17341672 - 17341737
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcc 451  Q
    |||||| ||||||||||||||||  ||||||| |||||||||||   ||||| |||||||||||||    
T  17341672 acacttataattacactgaattatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcc 17341737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 24645561 - 24645480
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtc 437  Q
    ||||| |||| |||| ||||| |||||| |||||||||| || |||||||||  ||||||||| ||||||||||| ||||||    
T  24645561 gtgtcggacacgtgtcgtgtctgacaccgacacttgtaactatactgaattatgtgatttttttcaaattattagctgtgtc 24645480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 437
Target Start/End: Original strand, 1191695 - 1191759
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| ||| | ||||||||||||||||||||||   ||| |||||||||||||||| ||||||    
T  1191695 gtgtccaacatcgacacttgtaattacactgaattttgtgaatttttcaaattattagctgtgtc 1191759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 390 - 430
Target Start/End: Complemental strand, 2224273 - 2224233
Alignment:
Q  390 ttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  2224273 ttgtaattacactgaattatatgatttttttaaattattag 2224233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 7151471 - 7151419
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| | |||||||||| |||||  ||||||||||||||||||||    
T  7151471 cgacaccaacacatataattacacttaattatgtgattttttcaaattattag 7151419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 382 - 429
Target Start/End: Original strand, 4118337 - 4118384
Alignment:
Q  382 accaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||||||||||||||| | |||||  |||||||||||||||||||    
T  4118337 accaacacttgtaattacatttaattatgtgattttttcaaattatta 4118384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 436
Target Start/End: Original strand, 9911528 - 9911587
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattt-tttcaaattattagttgtgt 436  Q
    ||||||| |||||||||||||||||||||||  |||||| ||| |||||||||| |||||    
T  9911528 cgacaccgacacttgtaattacactgaattatgtgatttcttttaaattattagctgtgt 9911587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 408
Target Start/End: Original strand, 16388212 - 16388247
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaatta 408  Q
    |||||||||||| |||||||||||||||||||||||    
T  16388212 gtgtccgacaccgacacttgtaattacactgaatta 16388247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 16488519 - 16488590
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||| | ||||||||||| | |||| |||| ||| |||||| |||| |||||||||||| ||||    
T  16488519 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 16488590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 363 - 429
Target Start/End: Original strand, 31579212 - 31579276
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||||| |||||||||||| |||| |  |||||||||||||||  ||||||| |||||||||||    
T  31579212 gacatgtgtcgtgtccgacaccgacacat--aattacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 427
Target Start/End: Complemental strand, 1700416 - 1700362
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattat 427  Q
    |||||||||||| |||||| ||||||||||||| ||  ||||||||| |||||||    
T  1700416 gtgtccgacaccgacacttataattacactgaaatatgtgatttttttaaattat 1700362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 357 - 427
Target Start/End: Complemental strand, 4864143 - 4864073
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattat 427  Q
    |||||||| |||| ||||||||||||||||||| | |||||| | | |||||  | |||||||||||||||    
T  4864143 gtgtcagatatgtattgtgtccgacaccaacacatataattaaattaaattatgtcattttttcaaattat 4864073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 17435256 - 17435206
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| ||||||||||||||||||||||||  | ||||||| ||||||||||    
T  17435256 acactaacacttgtaattacactgaattatgtaattttttaaaattattag 17435206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 19044522 - 19044452
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| |||| | |||| |||||||||||  |||| || ||||||||||||| ||||| |||||||||||    
T  19044522 gacaccgacacatataataacactgaattatgtgatattctcaaattattagtcgtgtcggcgtgtcagtg 19044452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 431
Target Start/End: Complemental strand, 33419237 - 33419179
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagt 431  Q
    ||||| ||||||||||| | |||||||| ||||||| || | |||||||||||||||||    
T  33419237 gtgtctgacaccaacacatataattacattgaattatatcaatttttcaaattattagt 33419179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 380
Target Start/End: Original strand, 8365445 - 8365510
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccga 380  Q
    ||||||||||||||||| | |||| |||||| |||| |||| ||||| |||| |||| ||||||||    
T  8365445 aacctatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccga 8365510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 21924930 - 21924987
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| |||| | ||||||||||||||||  |||| || ||||||||||||    
T  21924930 gtgtccgacaccgacacatataattacactgaattatttgatattctcaaattattag 21924987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 430
Target Start/End: Complemental strand, 24614474 - 24614417
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||| |  ||||||||| ||||| || ||||||| ||||||||||    
T  24614474 gtgtccgacaccaacacatacaattacactaaattatataatttttttaaattattag 24614417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 437
Target Start/End: Original strand, 25010212 - 25010261
Alignment:
Q  388 acttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||||| || ||||||||  |||||||||||||||||||| ||||||    
T  25010212 acttgtaataacgctgaattatgtgattttttcaaattattagctgtgtc 25010261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 5732505 - 5732581
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| |||| | |||||||||| || ||  ||||||| |||||||||||   ||||| |||||||||||    
T  5732505 gtgtccgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtg 5732581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 8714039 - 8713987
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattatta 429  Q
    ||||||| ||| |||||||||||||||||||  ||| ||||||||||||||||    
T  8714039 cgacacccacatttgtaattacactgaattatgtgatttttttcaaattatta 8713987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 9025494 - 9025546
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| |||| | ||||||||||||||||  ||||||| ||||||||||||    
T  9025494 cgacaccgacacatataattacactgaattatgtgattttctcaaattattag 9025546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 26402666 - 26402710
Alignment:
Q  364 acatgtgttgtgtccgacaccaacacttgtaattacactgaatta 408  Q
    |||||| | |||||||||||| |||||||| ||||||||||||||    
T  26402666 acatgtatcgtgtccgacaccgacacttgtgattacactgaatta 26402710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 34290092 - 34290148
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||  ||||| |  |||||||||||||||||| || ||||||||    
T  34290092 taattacactgaattatgtgattctcgcaaattattagttgtgtcggcatgtcagtg 34290148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 6e-35; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 20503584 - 20503453
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| |||| |||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||  | |||||    
T  20503584 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcagacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtcatttt 20503485  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| |||||||| |||||||||||    
T  20503484 ttcaaattatttgttgtgtcggcgtgtcagtg 20503453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 10955074 - 10954940
Alignment:
Q  318 ctatgaagcacgga---tattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat 414  Q
    ||||||||||||||   || |||| |||||| |||| |||| ||||| |||| |||| |||||||||||| |||||||| ||||||||||||||  ||||    
T  10955074 ctatgaagcacggacactactcctcggattaggcgtgtcccagtgtcggacacgtgtcgtgtccgacaccgacacttgtgattacactgaattatgtgat 10954975  T
Q  415 tttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||| |||||||||||    
T  10954974 tttttcaaattattagttgtgtcggcgtgtcagtg 10954940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 55401194 - 55401063
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| |||| || | ||||| |||| |||| |||||||||||| ||||||||||||||||| |||||  |||||||    
T  55401194 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 55401095  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||| |||| ||||||    
T  55401094 ttcaaattattagttgtgtcggcgtatcagtg 55401063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 315 - 449
Target Start/End: Original strand, 26492142 - 26492276
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat 414  Q
    |||||||||||| |||| |||||| ||||||  ||| ||   ||||||||||||||| |||||||||||| | ||||||||||||||||||||  |||||    
T  26492142 aacctatgaagcgcggacattcctcggattagacgtgtcttggtgtcagacatgtgtcgtgtccgacaccgatacttgtaattacactgaattgtatgat 26492241  T
Q  415 tttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||| | |||| |||||||||||    
T  26492242 tttttcaaattattagctctgtcggcgtgtcagtg 26492276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 320 - 448
Target Start/End: Complemental strand, 28918120 - 28917990
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtcc--gacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||| ||| | ||||||||||| |||| |||| ||||| |||| |||| ||||||  |||||| |||||||||||||||||||||||  |||||||    
T  28918120 atgaagcagggacactccttggattaggcgtgtcccagtgtcggacacgtgtcgtgtccacgacaccgacacttgtaattacactgaattatgtgatttt 28918021  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||||||||| | |||| ||||||||||    
T  28918020 ttcaaattattagctatgtcggcgtgtcagt 28917990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 439
Target Start/End: Original strand, 51206293 - 51206414
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||||||||||   ||||||| ||||| |||  |   ||||||||||||| ||||||||| |||||||||||||  |||||||    
T  51206293 ctatgaagcacggacactccttggattagaggtatcccggtgtcggacgcgacatgtgtccgacaccgacacttgtatttacactgaattatgtgatttt 51206392  T
Q  418 ttcaaattattagttgtgtcag 439  Q
    ||||||||||||| ||||||||    
T  51206393 ttcaaattattagctgtgtcag 51206414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 4987294 - 4987362
Alignment:
Q  381 caccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||    
T  4987294 caccaacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 4987362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 381 - 448
Target Start/End: Complemental strand, 26508166 - 26508099
Alignment:
Q  381 caccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    |||| |||||||||||||||||||||||  |||||||||||||||||||| |||||||||||||||||    
T  26508166 caccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagt 26508099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 445
Target Start/End: Complemental strand, 35223065 - 35222930
Alignment:
Q  310 cctttaacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaa 409  Q
    ||||||| |||||||||||||| | |||| |||| |||||| |||| |||||||||| ||||  ||||||||||| |||| | |||||||| |||||||     
T  35223065 cctttaaactatgaagcacggacactcctcggataaagcgtgtccccgtgtcagacacgtgtcatgtccgacaccgacacatataattacattgaattat 35222966  T
Q  410 atgattttttcaaattattagttgtgtcagcgtgtc 445  Q
     ||||||| | ||| | ||||||||||| |||||||    
T  35222965 gtgattttctaaaaatgttagttgtgtcggcgtgtc 35222930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 335 - 448
Target Start/End: Complemental strand, 7171603 - 7171491
Alignment:
Q  335 tccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgt 434  Q
    ||||||||||| |||| || | ||||| |||| |||| ||||||||||||||||||||||||||||| |||||| |||| ||||||||||||  || |||    
T  7171603 tccttggattaggcgtgtcgcggtgtcggacacgtgtcgtgtccgacaccaacacttgtaattacaccgaattatatga-tttttcaaattacaagctgt 7171505  T
Q  435 gtcagcgtgtcagt 448  Q
    ||| || |||||||    
T  7171504 gtcggcatgtcagt 7171491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 15999951 - 16000087
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgt------ccgacaccaacacttgtaattacactgaattaaatg 412  Q
    ||||| ||||||| | ||||||||||| |||| |||| ||||| |||| |||| ||||      |||||||| ||||||||| |||||||||||||  |     
T  15999951 tatgatgcacggacactccttggattaggcgtgtcccggtgtcggacacgtgtcgtgtacgtgtccgacaccgacacttgtagttacactgaattatgtt 16000050  T
Q  413 attttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  16000051 atttttttaaattattagttgtgtcggcgtgtcagtg 16000087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 8587017 - 8587092
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| ||||||||||||||||| |||||  |||||||||||||||| ||| |||||| |||||||||||    
T  8587017 tgtccgacaccgacacttgtaattacacttaattatgtgattttttcaaattactagatgtgtcggcgtgtcagtg 8587092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 363 - 445
Target Start/End: Original strand, 15505775 - 15505858
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| || | |||||| ||||||||| |||| ||| ||||||    
T  15505775 gacatgtgttgtgtccgacaccaacacttataattacactgaattatataattttttttaaattattaattgtatcaacgtgtc 15505858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 34910376 - 34910309
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| || ||||||||||||||||||||  ||||||||||||||||||||||||||| |||||||    
T  34910376 cgacaccgactcttgtaattacactgaattatgtgattttttcaaattattagttgtgtcggcgtgtc 34910309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 419
Target Start/End: Original strand, 40993273 - 40993376
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||| ||| | |||| |||||| |||| |||| ||||| ||||||||| |||||||||||| |||| | ||||||||||||||||  |||||    
T  40993273 acctatgaagcatggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatt 40993372  T
Q  416 tttt 419  Q
    ||||    
T  40993373 tttt 40993376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 373 - 446
Target Start/End: Complemental strand, 8383321 - 8383248
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||| |||||| |||||||||||||||| |||||||| ||||||||||||  ||||| ||||||||    
T  8383321 gtgtccgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtca 8383248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 15796294 - 15796362
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| ||| ||||||||||||||||||| ||||||||||||||||||||  |||||| ||||||||    
T  15796294 cgacaccgacaattgtaattacactgaattatatgattttttcaaattattaactgtgtcggcgtgtca 15796362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 21479178 - 21479106
Alignment:
Q  377 ccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||| ||||| ||||||||||||||||   |||||||||||||||||||| |||||| |||||||||||    
T  21479178 ccgacaccgacactagtaattacactgaattgtgtgattttttcaaattattagctgtgtcggcgtgtcagtg 21479106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 14209164 - 14209105
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||||||||||  ||||||||| ||||||||||||||||| |||||||    
T  14209164 acacttgtaattacactgaattatgtgattttttaaaattattagttgtgtcggcgtgtc 14209105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 14216943 - 14216880
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||  ||||||||||    
T  14216943 acacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtg 14216880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 14223072 - 14223009
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||  ||||||||||    
T  14223072 acacttgtaattacactgaattatatgatattttaaaattattagttgtgtcgacgtgtcagtg 14223009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 28812574 - 28812507
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| |||||||||| ||||||||||||  |||||| |||||||||||||||||||| |||||||    
T  28812574 cgacaccgacacttgtaactacactgaattatgtgatttcttcaaattattagttgtgtcggcgtgtc 28812507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 431
Target Start/End: Complemental strand, 29508567 - 29508450
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaaca------cttgtaattacactgaattaaatga 413  Q
    |||||||||||| | | |||||||||  ||| |||| ||||| ||| ||||| ||||||||||||||||      | | |||||||||||||||| ||||    
T  29508567 atgaagcacggacacttcttggattagacgtgtcccggtgtcggacgtgtgtcgtgtccgacaccaacatcgacacatataattacactgaattatatga 29508468  T
Q  414 ttttttcaaattattagt 431  Q
    ||||||||||||||||||    
T  29508467 ttttttcaaattattagt 29508450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 1509598 - 1509537
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||||||||    
T  1509598 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcag 1509537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 10335276 - 10335357
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||| |||||||| ||||||||| ||||||| || ||  ||| ||||||||||||||||||||||| |||||||||||    
T  10335276 gtgtcgtgcccgacaccgacacttgtatttacactaaaatatgtgactttttcaaattattagttgtgtcggcgtgtcagtg 10335357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 25775573 - 25775496
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgatt-ttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| |||||||||||||||||||||||  ||||| ||||||||||||||  |||||  |||||||||||    
T  25775573 gtgtccgacaccgacacttgtaattacactgaattatgtgattattttcaaattattaaatgtgttggcgtgtcagtg 25775496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 10268481 - 10268557
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||  ||||||||||||||||| |||||  |||||||||||||||||||  |||||| |||||||||||    
T  10268481 gtgtctgacactgacacttgtaattacactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtg 10268557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 25948887 - 25948939
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  25948887 cgacaccaacacttataattacactgaattatgtgattttttcaaattattag 25948939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 16789071 - 16789020
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||||| |||||||||||||||| |||||||||| |||||||||    
T  16789071 cgacaccaacacttataattacactgaattatatgatttttttaaattatta 16789020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 21256994 - 21257053
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||| |||||||||  |||||||||||||||||||| ||||||| ||||||    
T  21256994 acacttgtaattatactgaattatgtgattttttcaaattattagctgtgtcatcgtgtc 21257053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 41961650 - 41961721
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||| |||| |  |||| |||||||||||||||||||| | |||||||||||    
T  41961650 cgacaccgacacttgtaattacaccgaataatgtgatattttcaaattattagttgtgacggcgtgtcagtg 41961721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 430
Target Start/End: Complemental strand, 7928514 - 7928457
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| |||| | ||||||||||||||||  ||||||||||||||||||||    
T  7928514 gtgtccgacaccgacacatataattacactgaattatgtgattttttcaaattattag 7928457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 436
Target Start/End: Original strand, 17005621 - 17005677
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgt 436  Q
    ||||| |||||| |||||||||||||||| |||||||| ||||||||||||| ||||    
T  17005621 acaccgacacttataattacactgaattatatgattttatcaaattattagtggtgt 17005677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 25093582 - 25093510
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| |||||||||||||||||||||| |||| | |||||||||||||||   ||||||| |||||| ||||    
T  25093582 gtgtcggacatgtgttgtgtccgacaccgacacatataattacactgaattgtgtgattttctcaaatcatta 25093510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 437
Target Start/End: Complemental strand, 27505370 - 27505246
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtc-----cgacaccaacacttgtaattacactgaattaaatg 412  Q
    |||||||||||||| | |||| |||||| || | |||| ||||| |||| |||| |||||     ||||||| ||||||||||||||||| |||||  ||    
T  27505370 ctatgaagcacggacactcctcggattaggcatgtcccggtgtcggacacgtgtcgtgtcagacacgacaccgacacttgtaattacacttaattatgtg 27505271  T
Q  413 attttttcaaattattagttgtgtc 437  Q
    ||||||  |||||||||| ||||||    
T  27505270 atttttaaaaattattagctgtgtc 27505246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 29112295 - 29112351
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||| |||||||| |||||| |||||| |||||| ||||||||||    
T  29112295 taattacactgaattatatgattttctcaaataattagtggtgtcaacgtgtcagtg 29112351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 34185123 - 34185191
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| ||||||||||||||||||||||   ||||||||| ||||||||||  ||||| ||||||||    
T  34185123 cgacaccgacacttgtaattacactgaattgtgtgattttttgaaattattagccgtgtcggcgtgtca 34185191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 49651786 - 49651838
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| ||||||||||||||| |||||||  ||||||||||||||||||||    
T  49651786 cgacaccgacacttgtaattacagtgaattatgtgattttttcaaattattag 49651838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 3164025 - 3164084
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||| ||||||||||  |||||||||||||  |||||||||||||||||||| ||||||    
T  3164025 cgacatcaacacttgttcttacactgaattatgtgattttttcaaattattagctgtgtc 3164084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 319 - 427
Target Start/End: Original strand, 8789489 - 8789599
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgtt--gtgtccgacaccaacacttgtaattacactgaattaaatgattt 416  Q
    ||||||||||||| | |||| |||||| |||| || | ||||| |||||||||   |||||||||||| |||| | ||||||||| ||||||  ||||||    
T  8789489 tatgaagcacggacactcctcggattaggcgtgtctcggtgtccgacatgtgtgtcgtgtccgacaccgacacatataattacacggaattatgtgattt 8789588  T
Q  417 tttcaaattat 427  Q
    | |||||||||    
T  8789589 tctcaaattat 8789599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 14829748 - 14829678
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||  |||||||  |||||||| ||||||||||| |||||| |||||||||||    
T  14829748 cgacaccgacacttgtaattaccatgaattatgtgattttt-caaattattagctgtgtcggcgtgtcagtg 14829678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 425
Target Start/End: Original strand, 6780404 - 6780466
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaatt 425  Q
    |||| |||||||||||||||||||||| | ||||||||||||| ||  ||||||| |||||||    
T  6780404 gacacgtgttgtgtccgacaccaacacatataattacactgaactacgtgattttctcaaatt 6780466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 33359823 - 33359749
Alignment:
Q  375 gtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||  ||||||||| ||||||| || ||  |||  ||||||||||||||| ||||||||||||||||||    
T  33359823 gtccgacactgacacttgtatttacactaaaatatgtgaccttttcaaattattagctgtgtcagcgtgtcagtg 33359749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 374 - 438
Target Start/End: Complemental strand, 8593200 - 8593135
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtca 438  Q
    ||||||||||| ||||||||||||| |||||||||  ||||||||| ||||||| ||| |||||||    
T  8593200 tgtccgacaccgacacttgtaattatactgaattatgtgattttttccaaattagtagctgtgtca 8593135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 403
Target Start/End: Original strand, 13845465 - 13845550
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactg 403  Q
    |||||||||||||| | ||||||||| | |||| || | |||||||||| || | |||||||||||| |||| | |||||||||||    
T  13845465 ctatgaagcacggacactccttggataaggcgtgtctccgtgtcagacacgtctcgtgtccgacaccgacacatataattacactg 13845550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 389 - 449
Target Start/End: Complemental strand, 14747610 - 14747549
Alignment:
Q  389 cttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||| |||||  ||||||||| ||||||||||| |||||| |||||||||||    
T  14747610 cttgtaattacactaaattatgtgatttttttcaaattattagctgtgtcggcgtgtcagtg 14747549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 394 - 443
Target Start/End: Complemental strand, 14979224 - 14979175
Alignment:
Q  394 aattacactgaattaaatgattttttcaaattattagttgtgtcagcgtg 443  Q
    |||||||||||||||  |||||||||||||||||||| |||||| |||||    
T  14979224 aattacactgaattatgtgattttttcaaattattagctgtgtcggcgtg 14979175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 15314876 - 15314937
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||||||||| | |||||||||| |||||  |||||||||||||||| || |||||||||    
T  15314876 cgacaccaacacatataattacactaaattatgtgattttttcaaattaataattgtgtcag 15314937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 35994734 - 35994805
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||||||| | ||||||||||||||||||||||  ||| |||||||||||||||| |||||| || |||||    
T  35994734 gtgtccgacacga-cacttgtaattacactgaattatgtga-tttttcaaattattagctgtgtcggcttgtca 35994805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 750618 - 750686
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| |||||||||||| ||  ||||||  |||| ||||||||||||||||||||||  |||||||    
T  750618 cgacaccgacacttgtaattgcagcgaattatgtgatattttcaaattattagttgtgtcgccgtgtca 750686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 14832150 - 14832091
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||| ||| |||  |||||||||||||||||||| ||| || |||||||    
T  14832150 acacttgtaattacattgagttatgtgattttttcaaattattagctgtatcggcgtgtc 14832091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 429
Target Start/End: Complemental strand, 15864950 - 15864841
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttg-tgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||||||| | || |||||||| |||| |||| |||||||||| |||| | |||||||||| | ||| | | |||||||| ||||| || |||||    
T  15864950 tatgaagcacggacactctttggattaggcgtgtccc-gtgtcagacacgtgtcggtgtccgacacga-cacctatgattacactaaattatatcatttt 15864853  T
Q  418 ttcaaattatta 429  Q
    ||||||||||||    
T  15864852 ttcaaattatta 15864841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 445
Target Start/End: Complemental strand, 18427068 - 18426941
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||| |||||| | ||||  ||||| | || |||| ||| | |||| |||| || ||||||||| |||  | ||||||||| ||||||  |||||||    
T  18427068 ctatgaaacacggacactcctcagattaggtgtgtcccggtgccggacacgtgtcgtatccgacaccgacatatataattacaccgaattatgtgatttt 18426969  T
Q  418 ttcaaattattagttgtgtcagcgtgtc 445  Q
    || ||||||||||| ||||| |||||||    
T  18426968 ttgaaattattagtggtgtcggcgtgtc 18426941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 39756295 - 39756224
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||| | | |||||  ||||||||| ||||||||| || |||| |||||||||||    
T  39756295 cgacaccgacacttgtaattatattaaattatgtgatttttttaaattattaattttgtcggcgtgtcagtg 39756224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 449
Target Start/End: Complemental strand, 40052367 - 40052320
Alignment:
Q  402 tgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||  |||||||||||||||||||| |||||| |||||||||||    
T  40052367 tgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 40052320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Complemental strand, 11610572 - 11610510
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    |||||||||| ||||||||||||  ||||||||| ||||||||||  ||||  ||||||||||    
T  11610572 acacttgtaactacactgaattatgtgatttttttaaattattagcggtgttggcgtgtcagt 11610510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 34307788 - 34307846
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    |||||| ||||||||||||| ||  ||||||| ||||||||||||  ||||||||||||    
T  34307788 acacttataattacactgaaatatgtgattttctcaaattattagcggtgtcagcgtgt 34307846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 11252095 - 11251985
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||||| || | |||| |||||| |||| | ||  || | |||| |||||||||| |||||| |||| |  |||||||||||||||  |||||||    
T  11252095 ctatgaagcacagacactcctcggattaggcgtgttccgatgccggacacgtgttgtgtctgacaccgacacat--aattacactgaattatgtgatttt 11251998  T
Q  418 ttcaaattattag 430  Q
     ||||||||||||    
T  11251997 ctcaaattattag 11251985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Original strand, 23870574 - 23870611
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattag 430  Q
    |||| ||||||||||| |||||||||||||||||||||    
T  23870574 taatcacactgaattatatgattttttcaaattattag 23870611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 430
Target Start/End: Complemental strand, 45451633 - 45451560
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||| ||||||||| |||||||||||| |||| | | |||| |||||| ||  ||||||| ||||||||||||    
T  45451633 gtgtcggacatgtgtcgtgtccgacaccgacacatattattatactgaagtatgtgattttctcaaattattag 45451560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 8039835 - 8039887
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| |||| | |||||||||||||||| || ||||| ||||||||||||    
T  8039835 cgacaccgacacatataattacactgaattatataattttctcaaattattag 8039887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 12704051 - 12703999
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||||  || |||| ||||||||||||| ||||| |||||||    
T  12704051 taattacactgaattatgtgcttttctcaaattattagtggtgtcggcgtgtc 12703999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 1e-32; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 18840953 - 18841084
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| | || |||| ||||| ||||||||| ||||| |||||| ||||||||||||||||| |||||  | |||||    
T  18840953 ctatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacatgtgtcgtgtctgacaccgacacttgtaattacacttaattatgtaatttt 18841052  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||||||||||||    
T  18841053 ttcaaattattagttgtgtcagcgtgtcagtg 18841084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 38117099 - 38117230
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| |  ||| |||||| |||| |||| ||||| |||| |||||||||||||||||||||||||||||||||| ||| ||  |||||||    
T  38117099 ctatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacacgtgttgtgtccgacaccaacacttgtaattacaccgaagtatgtgatttt 38117198  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| |||||| |||||||||||    
T  38117199 ttcaaattattagctgtgtcggcgtgtcagtg 38117230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 320 - 442
Target Start/End: Original strand, 2438661 - 2438783
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||||| | |||| |||||| |||| |||| ||||| ||||||||| |||||||||||| |||||||||||||||||||||||  |||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 2438760  T
Q  420 caaattattagttgtgtcagcgt 442  Q
     |||||||||| |||||||||||    
T  2438761 gaaattattagctgtgtcagcgt 2438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 317 - 449
Target Start/End: Complemental strand, 15972993 - 15972861
Alignment:
Q  317 cctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattt 416  Q
    ||||||||||||||| |||| | |||||| | || |||| | ||| |||| |||| |||||||||||| ||||||||||||||||||||||   | ||||    
T  15972993 cctatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactgaattgtgtaattt 15972894  T
Q  417 tttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| ||||||| |||||||||||    
T  15972893 tttcaaattattaattgtgtcggcgtgtcagtg 15972861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 37559096 - 37558965
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| ||||||||||| | || ||||| |||| ||||   |||||||||| ||||||||||||||| |||||||  |||||||    
T  37559096 ctatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacacgtgtcaagtccgacaccgacacttgtaattacattgaattatgtgatttt 37558997  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    | ||||||||||| |||||| |||||||||||    
T  37558996 tacaaattattagctgtgtcggcgtgtcagtg 37558965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 30404829 - 30404921
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| ||||||||| ||||||||| || |||||||||||||||||||||||  |||||||||||||||||||   ||||| |||||||||||    
T  30404829 gtgtcggacatgtgtcgtgtccgacgccgacacttgtaattacactgaattatgtgattttttcaaattattaaccgtgtcggcgtgtcagtg 30404921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 390 - 449
Target Start/End: Original strand, 12940947 - 12941006
Alignment:
Q  390 ttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    
T  12940947 ttgtaattacactgaattatatgattttttcaaattattagttgtgtcaacgtgtcagtg 12941006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 19536392 - 19536466
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||| |||||||||||||||||||||||  ||| |||||||||||||||||||||||| ||||||||    
T  19536392 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattagttgtgtcggcgtgtca 19536466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 20242706 - 20242798
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||| ||||||||||||||||| |||| | ||||||||||||||||  ||||||| | |||  |||||||||||| |||||||||||    
T  20242706 gtgtcagacacgtgttgtgtccgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtg 20242798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 20473386 - 20473310
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||| | ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| || ||||||||    
T  20473386 gtgtccgacatcgacacttgtaattacactgaattatatgagttttttaaattattagttgtgtcggcatgtcagtg 20473310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 20539674 - 20539745
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||| ||||||  ||||||||||    
T  20539674 cgacaccgacacttgtaattacactaaattatatgattttttcaaattattagctgtgtcgacgtgtcagtg 20539745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 18422027 - 18421951
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||||||| |||||||||||||||||||||||  |||| |||| ||||||||| ||||||| |||||||||||    
T  18422027 gtgttcgacaccgacacttgtaattacactgaattatgtgatatttttaaattattaattgtgtcggcgtgtcagtg 18421951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 316 - 443
Target Start/End: Complemental strand, 30335537 - 30335411
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||||  | ||| ||  ||||| || |||||| |||||  ||||||||| |||| |||||| ||| ||||||||||||| |||||  | |||    
T  30335537 acctatgaagcacatacatttctcagattaggcatatcccagtgtcgaacatgtgttatgtc-gacaccgacatttgtaattacactaaattatgtcatt 30335439  T
Q  416 ttttcaaattattagttgtgtcagcgtg 443  Q
    |||||||||||||||||||||| |||||    
T  30335438 ttttcaaattattagttgtgtcggcgtg 30335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 379 - 445
Target Start/End: Original strand, 11223864 - 11223930
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||| |||||||||||||||||||||||  | ||||||||||| |||||| ||||||||||||||    
T  11223864 gacaccgacacttgtaattacactgaattatgttattttttcaaaatattagctgtgtcagcgtgtc 11223930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 378 - 448
Target Start/End: Original strand, 12668423 - 12668493
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||| |||||| ||||||||||||||||  | |||||||||||||||||||| |||| ||||||||||    
T  12668423 cgacaccgacacttataattacactgaattatgtcattttttcaaattattagttatgtcggcgtgtcagt 12668493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 449
Target Start/End: Original strand, 29176472 - 29176564
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| ||||||||  |||||| |||||||||||| ||||||||||||||||  |||  ||||||||||||||  |||||| |||||| ||||    
T  29176472 gtgtcggacatgtgccgtgtccaacaccaacacttataattacactgaattatgtgaccttttcaaattattaactgtgtctgcgtgtaagtg 29176564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 974806 - 974747
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| ||||||||||||||||||||| |  |||| ||||||||||||||||||||||    
T  974806 cgacaccgacacttgtaattacactgaataatgtgatcttttcaaattattagttgtgtc 974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 379 - 449
Target Start/End: Original strand, 14996224 - 14996295
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| ||||||||||||||||| ||||| |||| ||||||||||||||||| |||||| || ||||||||    
T  14996224 gacaccgacacttgtaattacactaaattatatgatttttttcaaattattagctgtgtcggcttgtcagtg 14996295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 15657923 - 15657852
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||| |||||||||||||||||||  |||||||| |||||||||||||| ||| |||||| ||||    
T  15657923 cgacaccgacatttgtaattacactgaattatgtgatttttacaaattattagttgagtcggcgtgttagtg 15657852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 21374707 - 21374770
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  | |||||||||||||||||| |||||| |||||| ||||    
T  21374707 acacttgtaattacactgaattatgtaattttttcaaattattagctgtgtcggcgtgttagtg 21374770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 382 - 449
Target Start/End: Complemental strand, 24894444 - 24894377
Alignment:
Q  382 accaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||| ||||| ||||||||||  ||||||||| |||||||||| |||||| |||||||||||    
T  24894444 accaacacttttaattgcactgaattatgtgatttttttaaattattagctgtgtcggcgtgtcagtg 24894377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 36756344 - 36756415
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||| ||||||||||||||||  | |||| ||||||||||||||||||||  ||||||||||    
T  36756344 cgacaccgacacttataattacactgaattatgttatttcttcaaattattagttgtgtcgacgtgtcagtg 36756415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 337 - 431
Target Start/End: Complemental strand, 5367292 - 5367198
Alignment:
Q  337 cttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagt 431  Q
    ||||||||| |||| |||| | ||| || |||||| |||||||||||| |||| | ||||||||||||||||  ||||||  |||||||||||||    
T  5367292 cttggattaggcgtgtcccggagtcggatatgtgtcgtgtccgacaccgacacatataattacactgaattatgtgatttcctcaaattattagt 5367198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 21624331 - 21624254
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaatta-aatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| |||||||||||||||||||||||   |  |||||| |||||||||| |||||| |||||||||||    
T  21624331 gtgtccgacaccgacacttgtaattacactgaattatgctatttttttaaaattattagctgtgtcggcgtgtcagtg 21624254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 30717459 - 30717582
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac-----------ttgtaattacactgaat 406  Q
    |||||||||||||| | ||||||||||| ||||||||| |||||  ||| |||| |||||||||| | ||||           |||||||||||||||||    
T  30717459 ctatgaagcacggacactccttggattaggcgtatcccagtgtcgaacacgtgtcgtgtccgacaacgacacgacatcgacacttgtaattacactgaat 30717558  T
Q  407 taaatgattttttcaaattattag 430  Q
    ||  ||||||||||||||||||||    
T  30717559 tatgtgattttttcaaattattag 30717582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 34691800 - 34691857
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| |||| | |||||||||||||||| |||||||| ||||||||||||    
T  34691800 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34691857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 34714212 - 34714269
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| |||| | |||||||||||||||| |||||||| ||||||||||||    
T  34714212 gtgtccgacaccgacacatataattacactgaattatatgattttatcaaattattag 34714269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 430
Target Start/End: Complemental strand, 5040845 - 5040739
Alignment:
Q  326 cacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga--ttttttcaaa 423  Q
    |||||| | |||||||| || |||| |||| | ||| ||||  ||| |||||||||||| ||||||||||||||| |||||||  |||  ||||||||||    
T  5040845 cacggacactccttggactaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttgtaattacattgaattatgtgattttttttcaaa 5040746  T
Q  424 ttattag 430  Q
    |||||||    
T  5040745 ttattag 5040739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 24009414 - 24009343
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||| | ||||||||| | |||| |||| |||||||||| |||| |||||||||||| ||||    
T  24009414 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 24009343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 6940329 - 6940243
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||| ||||| || ||| ||||||||||||||||| |||||  | | ||||| |||||||||| |||||| |||||||||||    
T  6940329 gacacgtgtcgtgtcggataccgacacttgtaattacacttaattatgtaactttttaaaattattagctgtgtcggcgtgtcagtg 6940243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 12224325 - 12224228
Alignment:
Q  335 tccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga--ttttttcaaattattag 430  Q
    ||||||||||| |||| |||| ||||| |||| || | |||||||||||| ||||||||||||||| || ||||   ||  |||||||||||||||||    
T  12224325 tccttggattaggcgtgtcccagtgtcggacacgtatcgtgtccgacaccgacacttgtaattacattggattatgggattttttttcaaattattag 12224228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 23058442 - 23058511
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| |||||||||||||||||| ||||  ||| |||||||||||||||| ||||||  ||||||||    
T  23058442 cgacaccgacacttgtaattacactggattatgtgatttttttcaaattattaattgtgtgggcgtgtca 23058511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 404
Target Start/End: Complemental strand, 28596587 - 28596502
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactga 404  Q
    ||||||||||||| | |||| |||||| | || |||  ||||| |||| |||| |||||||||||| |||||| ||||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacacgtgtcgtgtccgacaccgacacttataattacactga 28596502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 42511322 - 42511387
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac 383  Q
    |||||||||||||| | |||| ||||||  ||| |||||||||| |||| ||||||||||||||||    
T  42511322 ctatgaagcacggacactcctcggattagccgtgtccctgtgtcggacacgtgttgtgtccgacac 42511387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 4882704 - 4882748
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||||||||| || |||||||||||| |||||    
T  4882704 acacttgtaattacactgaattatatcattttttcaaataattag 4882748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 16069269 - 16069325
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||| |||||||||| |||||||||   ||||| |||||||||||    
T  16069269 taattacactgaattatatgatttttttaaattattaacggtgtcggcgtgtcagtg 16069325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 18255975 - 18256047
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||| |||||| |||||||| | |||||  ||||||||| |||||||||  |||||||| |||||    
T  18255975 gtgtccgacaccgacacttctaattacattaaattatgtgatttttttaaattattatctgtgtcagtgtgtc 18256047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 21782833 - 21782889
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||  ||||||| ||||||||||||  ||||| |||||||||||    
T  21782833 taattacactgaattatgtgattttctcaaattattagcagtgtcggcgtgtcagtg 21782889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 33153475 - 33153415
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||||||||||||  ||||||||| |||| ||||| ||| || ||||||||    
T  33153475 acacttgtaattacactgaattatgtgatttttttaaatcattagatgtttcggcgtgtca 33153415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 37419802 - 37419731
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||  |||||||||||||||||||||   |||||||||||||||||| |   |||| |||||||||||    
T  37419802 cgacaccggcacttgtaattacactgaattttgtgattttttcaaattatttgccatgtcggcgtgtcagtg 37419731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 26769569 - 26769503
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||| ||||||||||||||||   || |  |||| |||||||||||||||||||||| |||||||    
T  26769569 gacaccgacacttgtaattacaccagataatgtgatattttcaaattattagttgtgtcggcgtgtc 26769503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 355 - 389
Target Start/End: Complemental strand, 28524519 - 28524485
Alignment:
Q  355 ctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||| ||||||||||||||||||||||    
T  28524519 ctgtgtcagacacgtgttgtgtccgacaccaacac 28524485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 18276565 - 18276528
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||| ||||||| ||||||||||||    
T  18276565 taattacactgaattaagtgattttctcaaattattag 18276528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 431
Target Start/End: Complemental strand, 18622665 - 18622612
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagt 431  Q
    |||||||||||| | ||||||||||||||||  ||||||| | |||||||||||    
T  18622665 cgacaccaacacgtataattacactgaattatgtgattttattaaattattagt 18622612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 28677953 - 28677916
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||  ||||||||||||||||||||    
T  28677953 taattacactgaattatgtgattttttcaaattattag 28677916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 31727883 - 31727846
Alignment:
Q  411 tgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||| ||||||||||||| ||||||||||||||||    
T  31727883 tgattttctcaaattattagtagtgtcagcgtgtcagt 31727846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 21616806 - 21616754
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||||  ||||||| ||||||||||||  ||||| |||||||    
T  21616806 taattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 21616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 23921317 - 23921261
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||||| | || ||||||||||||||||  | ||||| |||||||||||    
T  23921317 gtgtccgacaccaatatttataattacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 372 - 408
Target Start/End: Complemental strand, 27460102 - 27460066
Alignment:
Q  372 tgtgtccgacaccaacacttgtaattacactgaatta 408  Q
    ||||||||||||| || ||||||||||||||||||||    
T  27460102 tgtgtccgacaccgacccttgtaattacactgaatta 27460066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 39323315 - 39323271
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||    
T  39323315 acacttgtaattacactgaattatgtaattttgtcaaattattag 39323271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 362 - 438
Target Start/End: Original strand, 40361738 - 40361814
Alignment:
Q  362 agacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtca 438  Q
    ||||| |||| ||||| ||||||||||  | |||||||||| |||||  | ||||||||||||||||| | ||||||    
T  40361738 agacacgtgtcgtgtctgacaccaacagatataattacactaaattatgtaattttttcaaattattaatagtgtca 40361814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 21190998 - 21191127
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||||| | |||| |||||| |||| |||| | ||| |||| ||||||||||||||||| |||||||||||||||||||||||  |||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 21191097  T
Q  420 caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| |||||| || ||||||||    
T  21191098 caaattattagctgtgtcggcatgtcagtg 21191127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 21576685 - 21576816
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| |||| |||| |||||||||| |||| |||||||||| | |||||||||||||||||||||||  |||||||    
T  21576685 ctatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacatcgacacttgtaattacactgaattatgtgatttt 21576784  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| |||||  |||| ||||||    
T  21576785 ttcaaattattagctgtgttggcgtatcagtg 21576816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 6247686 - 6247610
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||    
T  6247686 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagatgtgtcggcgtgtcagtg 6247610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 430
Target Start/End: Original strand, 30502330 - 30502440
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||| | | ||||||||||| || | |||| ||||| ||||||||| |||||||||||| |||| | ||||||||||||||||| ||||||| |    
T  30502330 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30502429  T
Q  420 caaattattag 430  Q
    |||||||||||    
T  30502430 caaattattag 30502440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 430
Target Start/End: Original strand, 30542673 - 30542783
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||| | | ||||||||||| || | |||| ||||| ||||||||| |||||||||||| |||| | ||||||||||||||||| ||||||| |    
T  30542673 atgaagcacgaacaatccttggattaggcatgtcccagtgtcggacatgtgtcgtgtccgacaccgacacatataattacactgaattaagtgattttct 30542772  T
Q  420 caaattattag 430  Q
    |||||||||||    
T  30542773 caaattattag 30542783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 372 - 448
Target Start/End: Complemental strand, 33178090 - 33178014
Alignment:
Q  372 tgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||||||||| ||||||||||||||||| |||||  ||||||||| ||||||||||||||||| ||||||||||    
T  33178090 tgtgtccgacaccgacacttgtaattacactaaattatgtgatttttttaaattattagttgtgtcggcgtgtcagt 33178014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 315 - 446
Target Start/End: Original strand, 28588611 - 28588742
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat 414  Q
    ||||||||||||| ||| | || | ||||||||||| |||  |||||||| |||||| |||||||||||| |||| | ||||||||||||||||  ||||    
T  28588611 aacctatgaagcatggacactcttcggattaagcgtgtcctggtgtcagatatgtgtcgtgtccgacaccgacacctataattacactgaattatgtgat 28588710  T
Q  415 tttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||| |||||||||||   ||||| ||||||||    
T  28588711 tttctcaaattattaccggtgtcggcgtgtca 28588742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 39698592 - 39698529
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||||    
T  39698592 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtg 39698529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 31084447 - 31084311
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaatg 412  Q
    ||||||| |||||| | |||| |||||| || | |||| ||||| |||| |||| ||||||||||| |     ||||||||||||||| |||||||  ||    
T  31084447 ctatgaaccacggacactcctcggattaggcatgtcccagtgtcggacacgtgtcgtgtccgacacgacatcgacacttgtaattacattgaattatgtg 31084348  T
Q  413 attttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||| |||||| |||||||||||    
T  31084347 attttttcaaattattagctgtgtcggcgtgtcagtg 31084311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 357 - 437
Target Start/End: Complemental strand, 42893440 - 42893360
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||| |||| |||||||||| |||||| |||||||||||||||||| ||||  |||||||||||||||||||| ||||||    
T  42893440 gtgtcggacacgtgttgtgtctgacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtc 42893360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 386 - 439
Target Start/End: Original strand, 15405063 - 15405116
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15405063 acacttgtaattacattgaattatatgattttttcaaattattagttgtgtcag 15405116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 459
Target Start/End: Original strand, 21351906 - 21351986
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcctatgcttc 459  Q
    |||||| |||||||||||||||||||||||  ||| |||||| |||||||||||||||| | ||||||||| | |||||||    
T  21351906 gacaccgacacttgtaattacactgaattatgtgactttttccaattattagttgtgtcggtgtgtcagtgtccatgcttc 21351986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 14674320 - 14674257
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| |||||  |||||||||||||||||||| |||||| |||||||||||    
T  14674320 acacttgtaattacactaaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 14674257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 316 - 449
Target Start/End: Complemental strand, 43565002 - 43564871
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||||||| | | || |||||| |||| |||| | ||| ||||  ||| |||||||||||| |||||| |||||||||| |||||  |||||    
T  43565002 acctatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatgtcgtgtccgacaccgacacttataattacactaaattatgtgatt 43564903  T
Q  416 ttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||| ||||||||  | |||||| |||||||||||    
T  43564902 tttccaaattat--gatgtgtcggcgtgtcagtg 43564871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 448
Target Start/End: Complemental strand, 4105374 - 4105246
Alignment:
Q  322 gaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat--ttttt 419  Q
    |||||||||| | |||| |||||| |||| |||| || |||||||  | | | ||| || ||| |||||||||||||||||||||||  ||||  |||||    
T  4105374 gaagcacggacactcctcggattaggcgtgtcccagtatcagacacatatcgagtctgatacctacacttgtaattacactgaattatgtgatctttttt 4105275  T
Q  420 caaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||||||||| |||| ||||||||||    
T  4105274 caaattattagttatgtcggcgtgtcagt 4105246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 335 - 446
Target Start/End: Complemental strand, 15382587 - 15382468
Alignment:
Q  335 tccttggattaagcgtatccctgtgtcagacatgtgttgtgtcc------gacaccaacacttgtaattacactgaattaaatga--ttttttcaaatta 426  Q
    |||| |||||| |||| |||| ||||| ||||||||| ||||||      |||||| ||||||||||||| ||||||||| ||||  |||||||||||||    
T  15382587 tcctcggattaggcgtgtcccggtgtcggacatgtgtcgtgtccaacaccgacaccgacacttgtaattatactgaattatatgattttttttcaaatta 15382488  T
Q  427 ttagttgtgtcagcgtgtca 446  Q
    |||| |||||| ||||||||    
T  15382487 ttagctgtgtcggcgtgtca 15382468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 375 - 446
Target Start/End: Complemental strand, 8420089 - 8420018
Alignment:
Q  375 gtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||| ||||||||||||||| |||||||  | |||||||||||||||||| | |||| ||||||||    
T  8420089 gtccgacaccgacacttgtaattacattgaattatgttattttttcaaattattagctatgtcggcgtgtca 8420018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 10298628 - 10298557
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||| || ||||  ||| ||||||||||||||||||||||| |||||| ||||    
T  10298628 cgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtg 10298557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 21522809 - 21522738
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||| |||||||||||||||||||  | ||||||| |||||||||| |||||| |||||||||||    
T  21522809 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtg 21522738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 21533375 - 21533304
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||| |||||||||||||||||||  | ||||||| |||||||||| |||||| |||||||||||    
T  21533375 cgacaccgacaattgtaattacactgaattatgttattttttaaaattattagctgtgtcggcgtgtcagtg 21533304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 24906297 - 24906372
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||| |||||||||||||||||||||||  | |||||||||||||||||  |||||  |||||||||||    
T  24906297 tgtccgataccgacacttgtaattacactgaattatgtcattttttcaaattattatctgtgttggcgtgtcagtg 24906372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 320 - 430
Target Start/End: Complemental strand, 43001922 - 43001807
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac-----caacacttgtaattacactgaattaaatgat 414  Q
    |||||||||||| | |||| |||||| |||| |||  ||||  |||| |||| |||||||||||     |||||||||||||||||||||||||  | ||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgtttgacacgtgtcgtgtccgacacatcaccaacacttgtaattacactgaattatgtaat 43001823  T
Q  415 tttttcaaattattag 430  Q
    ||||||||||||||||    
T  43001822 tttttcaaattattag 43001807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 23012382 - 23012460
Alignment:
Q  352 tccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| ||||||||||||||| |||||| ||||| |||| | |||||||| | ||||| |||||||| ||||||||||||    
T  23012382 tcccggtgtcagacatgtgtcgtgtccaacaccgacacatataattacattaaattatatgattttctcaaattattag 23012460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 357 - 443
Target Start/End: Complemental strand, 27932315 - 27932229
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtg 443  Q
    ||||| |||| |||| |||||||||||||| | |||||||||||||||||||  | ||||| ||||||||||||  ||||| |||||    
T  27932315 gtgtccgacacgtgtcgtgtccgacaccaagatttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtg 27932229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 17177013 - 17177094
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||  ||||| ||||||||||||||| ||||||   |||||||||||||||||||| |||||  |||| ||||||    
T  17177013 gtgttgtgtctaacaccgacacttgtaattacaatgaattttttgattttttcaaattattagctgtgttggcgtatcagtg 17177094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 383
Target Start/End: Complemental strand, 6401627 - 6401563
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac 383  Q
    ||||||||||||| | ||||||||| | ||||||||| |||||||||| |||| |||||||||||    
T  6401627 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacac 6401563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 318 - 426
Target Start/End: Original strand, 21194063 - 21194171
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||| ||||||||| | |||| |||||| ||||  ||| ||||| ||||||||| |||||| ||||||| || | |||||||||||||| |  |||||||    
T  21194063 ctataaagcacggacactcctcggattaggcgtgccccggtgtctgacatgtgtcgtgtccaacaccaatacctataattacactgaatgatgtgatttt 21194162  T
Q  418 ttcaaatta 426  Q
     ||||||||    
T  21194163 ctcaaatta 21194171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 21542089 - 21542021
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| |||||||||||||||||||||||  | || |||| ||||||||||||||||| || |||||    
T  21542089 cgacaccgacacttgtaattacactgaattatgttatctttttaaattattagttgtgtcggcatgtca 21542021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 41995515 - 41995459
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||| |||||||  |||||||||| |||||||||||||||| |||||||||||    
T  41995515 taattacattgaattatgtgattttttcgaattattagttgtgtcggcgtgtcagtg 41995459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 5894833 - 5894892
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| ||||||||| ||| | | ||||| ||||||||||||||||||||||||||||    
T  5894833 cgacaccgacacttgtagttagattaaattatatgattttttcaaattattagttgtgtc 5894892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 6770615 - 6770531
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| |||||||||||  |||| |  || ||||||||||||  ||||||| | ||||||||||||||||||| |||||||||    
T  6770615 gacatgtgtcgtgtccgacactgacacat--aagtacactgaattatgtgattttcttaaattattagttgtgtcagtgtgtcagtg 6770531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 7677764 - 7677705
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| |||||| ||||| ||||||||||  |||||||||||||||||||| ||||||    
T  7677764 cgacaccgacacttctaattgcactgaattatgtgattttttcaaattattagctgtgtc 7677705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 429
Target Start/End: Original strand, 13287399 - 13287450
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||| ||||||||| |||||||||||||  |||||||||||||||||||    
T  13287399 cgacaccgacacttgtagttacactgaattatgtgattttttcaaattatta 13287450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 368 - 419
Target Start/End: Complemental strand, 15884057 - 15884006
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||| |||||||||||| |||||||||||||||||||||||  |||||||||    
T  15884057 gtgtcgtgtccgacaccgacacttgtaattacactgaattatgtgatttttt 15884006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 19579760 - 19579689
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||| |||| |||||  ||||||| |||||||||||| |||||| |||| ||||||    
T  19579760 cgacaccgacacttgtaattgcactaaattatgtgattttctcaaattattagctgtgtcggcgtatcagtg 19579689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 428
Target Start/End: Complemental strand, 26312849 - 26312778
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatt 428  Q
    |||||||||| || | |||||||||||| | || | ||||||||||||||||| ||||||| ||||||||||    
T  26312849 gtgtcagacacgtatcgtgtccgacaccgatacatataattacactgaattaattgattttctcaaattatt 26312778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 445
Target Start/End: Complemental strand, 30135372 - 30135305
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtc 445  Q
    |||||| ||||||||||||||| ||| |||  ||||||||| |||||||||||||||||| |||||||    
T  30135372 gacaccgacacttgtaattacaatgagttatgtgatttttttcaaattattagttgtgtcggcgtgtc 30135305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 41633794 - 41633724
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||| ||| |||||||||||||||||||  | | |||||||||||||||| |||||| | ||||||||    
T  41633794 cgacaccgacatttgtaattacactgaattatgtaaatttttcaaattattagctgtgtcggagtgtcagt 41633724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 430
Target Start/End: Complemental strand, 39206004 - 39205887
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtc-----cgacaccaacacttgtaattacactgaattaaatg 412  Q
    ||||||||||  || | |||||||||||| |||||||| ||||| | || |||| |||||     |||||||||||| | |||||||||  ||||| |||    
T  39206004 ctatgaagcatagacactccttggattaaacgtatcccggtgtcgggcacgtgtcgtgtcggacacgacaccaacacatataattacacctaattatatg 39205905  T
Q  413 attttttcaaattattag 430  Q
    ||||| ||||||||||||    
T  39205904 attttctcaaattattag 39205887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 40131665 - 40131609
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| |||||||||  |||||||||||||||||||||||| |||| || ||||||    
T  40131665 taattaaactgaattatgtgattttttcaaattattagttgtatcagtgtatcagtg 40131609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 21814391 - 21814320
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||| | ||||||||||| | |||| |||| ||| |||||| |||| |||||||||||| ||||    
T  21814391 ctatgaagcacgaacattccttggataaggcgtgtccccgtgccagacacgtgtcgtgtccgacaccgacac 21814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 30183608 - 30183549
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| ||||||||||||| || |||| |  |||| ||||||||||||||||||||||    
T  30183608 cgacaccgacacttgtaattaaaccgaataatgtgatattttcaaattattagttgtgtc 30183549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 439
Target Start/End: Original strand, 6471889 - 6471950
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||| |||| | ||||||||||||||||  ||||||| ||||||||||||  |||||||    
T  6471889 cgacacccacacatataattacactgaattatgtgattttctcaaattattagccgtgtcag 6471950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 21542159 - 21542094
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacc 384  Q
    ||||| ||||||| ||||||||||||  |||| |||| ||||| |||| |||| ||||||||||||    
T  21542159 tatgatgcacggacattccttggattcggcgtgtcccggtgtcggacacgtgtcgtgtccgacacc 21542094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 6326292 - 6326368
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| |  |||||||||||||||||||||||  | ||||| |||||||| |||   |||| |||||||||||    
T  6326292 gtgtccgacgctgacacttgtaattacactgaattatgtaattttctcaaattactagcgatgtcggcgtgtcagtg 6326368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 7218275 - 7218319
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||||||||||||||  |||||| || ||||||||||    
T  7218275 acacttgtaattacactgaattatgtgatttatttaaattattag 7218319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 17088336 - 17088276
Alignment:
Q  386 acacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||| ||||| |||||  ||||||||| ||||||||||| |||||||| |||||    
T  17088336 acacttgtaatcacactaaattatgtgatttttttcaaattattagatgtgtcagtgtgtc 17088276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 363 - 427
Target Start/End: Original strand, 18421826 - 18421890
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattat 427  Q
    ||||||||| ||||||||| || |||| | ||||||||||| ||||  ||||||| |||||||||    
T  18421826 gacatgtgtcgtgtccgacgccgacacatataattacactggattatgtgattttctcaaattat 18421890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 19552562 - 19552614
Alignment:
Q  397 tacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| |||||  |||||||||||||||||||  |||||| |||||||||||    
T  19552562 tacacttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtg 19552614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 449
Target Start/End: Complemental strand, 22013458 - 22013402
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||| |||||  | |||||| ||||||||||| |||||| |||||||||||    
T  22013458 taattacactaaattatgtaatttttccaaattattagctgtgtcggcgtgtcagtg 22013402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 358 - 446
Target Start/End: Original strand, 32630715 - 32630803
Alignment:
Q  358 tgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||| |||| |||| || ||||||||  |||| | |||||||| ||||||| || ||||| |||||||||||   ||||||||||||||    
T  32630715 tgtcggacacgtgtcgtatccgacactgacacatataattacattgaattatataattttctcaaattattatcggtgtcagcgtgtca 32630803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 393 - 429
Target Start/End: Original strand, 33035816 - 33035852
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||||||| ||||||| ||||||||||||    
T  33035816 taattacactgaattatatgatttattcaaattatta 33035852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 42029828 - 42029744
Alignment:
Q  361 cagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||| |||||||||||| | || | |||||||| |||||||  ||||||| | || || ||| ||||||| |||||||    
T  42029828 cagacatgtgtcgtgtccgacaccgatacatataattacattgaattatgtgattttctaaattttttaattgtgtcggcgtgtc 42029744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 9e-31; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 23292926 - 23293054
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| |||| |||| ||||| |||| |||| |||||||||||| ||||||||||||| |||||||||  |||||||    
T  23292926 ctatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattatactgaattatgtgatttt 23293025  T
Q  418 ttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||||||||| |||||| ||||||||    
T  23293026 ttcaaattattagctgtgtcggcgtgtca 23293054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 318 - 430
Target Start/End: Original strand, 28964188 - 28964300
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||| ||| | |||| |||||| |||| |||| ||||| || |||||| |||||||||||  |||||||||||||||||||||||  |||||||    
T  28964188 ctatgaagcatggacactcctcggattaggcgtgtcccagtgtcggatatgtgtcgtgtccgacacagacacttgtaattacactgaattatgtgatttt 28964287  T
Q  418 ttcaaattattag 430  Q
    |||||||||||||    
T  28964288 ttcaaattattag 28964300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 715545 - 715667
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtcc--gacaccaacacttgtaattacactgaattaaatga-t 414  Q
    |||||||||||||| | |||| |||||| |||| |||||||||| ||||||||| |||| |  ||||||||||||||||||||||||||||||  ||| |    
T  715545 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 715644  T
Q  415 tttttcaaattattagttgtgtc 437  Q
    ||||| |||||||||| ||||||    
T  715645 ttttttaaattattagctgtgtc 715667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 752871 - 752993
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtcc--gacaccaacacttgtaattacactgaattaaatga-t 414  Q
    |||||||||||||| | |||| |||||| |||| |||||||||| ||||||||| |||| |  ||||||||||||||||||||||||||||||  ||| |    
T  752871 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 752970  T
Q  415 tttttcaaattattagttgtgtc 437  Q
    ||||| |||||||||| ||||||    
T  752971 ttttttaaattattagctgtgtc 752993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 322 - 449
Target Start/End: Original strand, 12797282 - 12797408
Alignment:
Q  322 gaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttca 421  Q
    |||||||| | |||||| ||||||  | | |||| ||||||||||||| | |||||||||||| |||||||||||||||||||||||  ||| |||||||    
T  12797282 gaagcacgaacattcctcggattagacttgtcccggtgtcagacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgtga-tttttca 12797380  T
Q  422 aattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| || | |||||||||||    
T  12797381 aattattagttttgccggcgtgtcagtg 12797408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 35157925 - 35158056
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | | || ||||||||||| | || ||||  ||||||||| ||||| |||||| |||||| |||||||||| |||||  |||||||    
T  35157925 ctatgaagcacggacacttctcggattaagcgtgttccggtgttggacatgtgtcgtgtcagacaccgacacttataattacactaaattatgtgatttt 35158024  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    | |||||||||||||| ||| |||||||||||    
T  35158025 tccaaattattagttgcgtcggcgtgtcagtg 35158056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 363 - 442
Target Start/End: Original strand, 54580008 - 54580087
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgt 442  Q
    |||| |||| |||||||||||| |||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||    
T  54580008 gacacgtgtcgtgtccgacaccgacacttataattacactgaattatgtgattttttcaaattattagttgtgtcagcgt 54580087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 357 - 449
Target Start/End: Complemental strand, 21945583 - 21945491
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||||||  ||||||||||| |||||||||||||||||||||||  | |||||||||||||||||| |||||| || ||||||||    
T  21945583 gtgtcggacatgtgtcatgtccgacaccgacacttgtaattacactgaattatgtcattttttcaaattattagctgtgtcggcatgtcagtg 21945491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 19482727 - 19482656
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||| ||||||  |||| |||||||||||||||||||||| |||||||||||    
T  19482727 cgacaccaacacttgtaattacaccgaattatgtgatattttcaaattattagttgtgtcggcgtgtcagtg 19482656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 34306744 - 34306874
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||| | ||||||  ||||| |||| || | ||||| |||| |||| |||||||||||| |||||||||||||||||  ||||  ||| |||    
T  34306744 ctatgaagcacgaacattcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactacattatctga-ttt 34306842  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||| |||| ||||||    
T  34306843 ttcaaattattagttgtgtcggcgtatcagtg 34306874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 352 - 430
Target Start/End: Complemental strand, 29205529 - 29205451
Alignment:
Q  352 tccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| ||||| ||||||||| |||||| ||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  29205529 tcccggtgtcggacatgtgtcgtgtccaacaccgacacttgtaattacactgaattatgtgattttttcaaattattag 29205451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 316 - 447
Target Start/End: Complemental strand, 16073515 - 16073385
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||| ||| | |||| |||||| |||| ||   ||||| ||||||| | |||||||||||| |||||||||||||||||||||||   || |    
T  16073515 acctatgaagcatggacactcctcggattaggcgtgtcttagtgtcggacatgtatcgtgtccgacaccgacacttgtaattacactgaattatgcga-t 16073417  T
Q  416 ttttcaaattattagttgtgtcagcgtgtcag 447  Q
    |||||||||||||| ||||||  |||||||||    
T  16073416 ttttcaaattattacttgtgttggcgtgtcag 16073385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 357 - 439
Target Start/End: Complemental strand, 4157229 - 4157148
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||| ||||||||| |||||||||||| |||||||||||| |||| |||||  ||| |||||||||||||||||||||||||    
T  4157229 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtga-tttttcaaattattagttgtgtcag 4157148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 318 - 446
Target Start/End: Complemental strand, 49431145 - 49431016
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga-ttt 416  Q
    |||| ||||| ||| | |||| |||| | |||| |||| ||||  |||| |||| |||||||||||| |||||| ||||||||||||||||  ||| |||    
T  49431145 ctataaagcatggacactcctcggataaggcgtgtcccggtgttggacacgtgtcgtgtccgacaccgacacttttaattacactgaattatgtgatttt 49431046  T
Q  417 tttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||| |||||| ||||||||    
T  49431045 tttcaaattattagctgtgtcggcgtgtca 49431016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 12895214 - 12895342
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||| | | |||| |||||| |||| ||||  |||| || |  ||| |||||||||||| |||||| |||||||||  |||||  |||||||    
T  12895214 ctatgaagcacgaacactcctcggattaggcgtgtcccgatgtcggatacatgtcgtgtccgacaccgacacttataattacacaaaattatgtgatttt 12895313  T
Q  418 ttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||| ||||||| ||||||||    
T  12895314 ttcaaattattatttgtgtcggcgtgtca 12895342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 38846991 - 38847071
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||| |||| |||| || ||||||||  ||||||||||||||||||||| | ||||||||||||||||||||| ||||||    
T  38846991 gtgtcggacacgtgtcgtatccgacactgacacttgtaattacactgaataatatgattttttcaaattattagctgtgtc 38847071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 357 - 446
Target Start/End: Original strand, 2361954 - 2362043
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||| | || |||||||||||| |||||| |||||||||| |||||  | |||||||||||||||||| |||||| | ||||||    
T  2361954 gtgtcagacacgagtcgtgtccgacaccgacacttttaattacactaaattatgtaattttttcaaattattagctgtgtcggtgtgtca 2362043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 364 - 449
Target Start/End: Original strand, 40179622 - 40179707
Alignment:
Q  364 acatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||| |||||||||||| || | | ||||||||||||||||  ||||||||||||| ||||| | |||||| ||||||||||    
T  40179622 acatgtgtcgtgtccgacaccgacgcatataattacactgaattatgtgattttttcaaactattaatggtgtcaacgtgtcagtg 40179707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 11596352 - 11596404
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  11596352 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattag 11596404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 377 - 449
Target Start/End: Complemental strand, 15029825 - 15029753
Alignment:
Q  377 ccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| | ||||||||||||||||  |||| |||||||||||||||  ||||| |||||||||||    
T  15029825 ccgacaccaacacatataattacactgaattatgtgatattttcaaattattagcagtgtctgcgtgtcagtg 15029753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 30299006 - 30298934
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  | ||||||| ||||||||||| |||||| |||||||||||    
T  30299006 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtg 30298934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 30327874 - 30327802
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  | ||||||| ||||||||||| |||||| |||||||||||    
T  30327874 cgacaccgacacttgtaattacactgaattatgtcatttttttcaaattattagctgtgtcggcgtgtcagtg 30327802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 449
Target Start/End: Complemental strand, 40481688 - 40481625
Alignment:
Q  385 aacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||||||||    
T  40481688 aacacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtg 40481625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 3947702 - 3947825
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaatga 413  Q
    ||||||||||||| | |||| |||||| | || |||  ||||| |||| |||| ||||||||||| |     |||||||||||||||||||||||   ||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacacgtgtcgtgtccgacacgacactgacacttgtaattacactgaattatgcga 3947801  T
Q  414 ttttttcaaattattagttgtgtc 437  Q
    ||||||||||||||||| ||||||    
T  3947802 ttttttcaaattattagctgtgtc 3947825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 341 - 430
Target Start/End: Original strand, 8423681 - 8423770
Alignment:
Q  341 gattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||| |||| |||| ||||| ||||  ||| |||||||||||| ||| || ||||||||||||||||  ||||||| ||||||||||||    
T  8423681 gattaggcgtgtcccggtgtcggacagctgtcgtgtccgacaccgacatttataattacactgaattatgtgattttctcaaattattag 8423770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Complemental strand, 24544038 - 24543969
Alignment:
Q  381 caccaacacttgtaattacactgaattaaatg-attttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||||||||||||||| || ||||| || ||||||| ||||||||||||||||| |||||||||||    
T  24544038 caccgacacttgtaattacaatgcattaagtgtatttttttaaattattagttgtgtcggcgtgtcagtg 24543969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Complemental strand, 42640593 - 42640518
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatga---ttttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||| |||||||||||||||||||||||  |||   |||||||||||||| || |||||| |||||||    
T  42640593 gtgtccgacaccgacacttgtaattacactgaattatgtgatttttttttcaaattatcagctgtgtcggcgtgtc 42640518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 444
Target Start/End: Original strand, 6485613 - 6485677
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||||||| || |||| ||||||    
T  6485613 acaccgacacttgtaattacactaaattatgtgattttttcaaattattaattttgtctgcgtgt 6485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 12708198 - 12708134
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaa-ttattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  | ||||||| ||| |||||||||||||| |||||||||||    
T  12708198 acacttgtaattacactgaattatttcattttttaaaaattattagttgtgtctgcgtgtcagtg 12708134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 12895116 - 12895183
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| ||||||||||||||  |||||||  |||||||||||||||||||| ||| || |||||||    
T  12895116 cgacaccgacacttgtaattactttgaattatgtgattttttcaaattattagctgtttcggcgtgtc 12895183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 16303266 - 16303337
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||||||| ||||| || ||||||||||| |||||  | |||| |||||||||||    
T  16303266 cgacaccgacacttgtaattacactaaattatatcattttttcaaaatattatctttgtcggcgtgtcagtg 16303337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 27706185 - 27706248
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| |||||  ||||||||| ||||||||| |||||||  ||||||||||    
T  27706185 acacttgtaattacactaaattatgtgatttttttaaattattaattgtgtcgacgtgtcagtg 27706248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 51701317 - 51701258
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| |||||||||||||||||| |||||  | |||||||||||||||||| ||||||    
T  51701317 cgacactaacacttgtaattacactcaattatgtaattttttcaaattattagctgtgtc 51701258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 449
Target Start/End: Original strand, 14465088 - 14465146
Alignment:
Q  391 tgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||| |||||||  |||||||||||||||||||| ||||| || |||||||||    
T  14465088 tgtaattacattgaattatgtgattttttcaaattattaggtgtgttagagtgtcagtg 14465146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 24613702 - 24613760
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| ||||||||| ||||| |||||||  ||||||| |||||||||||||||||||    
T  24613702 gacaccgacacttgtacttacattgaattatgtgattttctcaaattattagttgtgtc 24613760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 357 - 418
Target Start/End: Complemental strand, 4157516 - 4157455
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||| ||||||||| |||||||||||| |||||||||||| |||| |||||  ||||||||    
T  4157516 gtgtcggacatgtgtcgtgtccgacaccgacacttgtaattgcactaaattatgtgattttt 4157455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 5414101 - 5414166
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac 383  Q
    |||||||||||||| | ||||||||| | | || ||||||||||||||| |||| |||||||||||    
T  5414101 ctatgaagcacggacactccttggataaggtgtgtccctgtgtcagacacgtgtcgtgtccgacac 5414166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 449
Target Start/End: Original strand, 11651140 - 11651205
Alignment:
Q  384 caacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| || ||||||||||  ||||||||| |||||||||| ||||||  ||||||||||    
T  11651140 caacacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtg 11651205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 36635381 - 36635312
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||||| | ||||||||||||||||  ||||||| ||||||||||||| ||||  |||||||||||    
T  36635381 acacgaacacatataattacactgaattatgtgattttctcaaattattagtggtgttggcgtgtcagtg 36635312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 437
Target Start/End: Original strand, 31800457 - 31800537
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||||||| ||| |||| ||| ||| ||||||||||||||| | |||||  | ||||||| |||||||||| ||||||    
T  31800457 gtgtcagacatctgtcgtgtacgataccgacacttgtaattacattaaattatttaattttttaaaattattagctgtgtc 31800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 449
Target Start/End: Complemental strand, 4383414 - 4383356
Alignment:
Q  390 ttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||  |||||||| ||||||||||||||| ||  ||||||||||    
T  4383414 ttgtaattacactgaattatgtgattttt-caaattattagttgtatcgacgtgtcagtg 4383356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 357 - 408
Target Start/End: Complemental strand, 13307957 - 13307906
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaatta 408  Q
    ||||| |||| |||| ||||||||||||||||||||| |||||| |||||||    
T  13307957 gtgtctgacacgtgtcgtgtccgacaccaacacttgtgattacattgaatta 13307906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 429
Target Start/End: Original strand, 28000743 - 28000794
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgatt-ttttcaaattatta 429  Q
    |||||| ||||||||||||||||||||||| |||||| |||| |||||||||    
T  28000743 gacaccgacacttgtaattacactgaattatatgattattttaaaattatta 28000794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 373 - 423
Target Start/End: Original strand, 6879460 - 6879510
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaa 423  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||| ||||    
T  6879460 gtgtccgacaccgacacttgtaattacacttaattatgtgatttttccaaa 6879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 447
Target Start/End: Complemental strand, 28084573 - 28084511
Alignment:
Q  386 acacttgtaattacactgaattaaatgatttttt-caaattattagttgtgtcagcgtgtcag 447  Q
    ||||||||||||||| |||||||  ||||||||| |||||| |||| |||||| |||||||||    
T  28084573 acacttgtaattacattgaattatgtgatttttttcaaattcttagctgtgtcggcgtgtcag 28084511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 379
Target Start/End: Complemental strand, 18966628 - 18966567
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccg 379  Q
    |||||||||||||| | ||||| ||||| |||||||||  |||| |||| ||||||||||||    
T  18966628 ctatgaagcacggacactccttagattaggcgtatcccgttgtcggacacgtgttgtgtccg 18966567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 388 - 449
Target Start/End: Complemental strand, 28720924 - 28720864
Alignment:
Q  388 acttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||| |||| ||||||||| ||||||||||| |||||| || ||||||||    
T  28720924 acttgtagttacactgcattatatgattttt-caaattattagctgtgtcggcatgtcagtg 28720864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 430
Target Start/End: Complemental strand, 56257977 - 56257940
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  56257977 taattacactgaattatatgattttctcaaattattag 56257940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Complemental strand, 37203315 - 37203271
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||    
T  37203315 acacttgtaattacactaaattatgtcattttttcaaattattag 37203271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 379 - 419
Target Start/End: Original strand, 49041862 - 49041902
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    ||||||||||  |||||||||||||||||| ||||||||||    
T  49041862 gacaccaacatatgtaattacactgaattatatgatttttt 49041902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 5e-29; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 37598956 - 37598820
Alignment:
Q  312 tttaacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaat 411  Q
    |||| ||||||||||||||| | |||| |||||| |||| ||||  |||| |||| |||| |||||||||||| |||||| |||||||||||||||   |    
T  37598956 tttaccctatgaagcacggacactcctcggattaggcgtgtcccattgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaatt-tgt 37598858  T
Q  412 gattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||||| |||||||||||    
T  37598857 gattttttcaaattattagttgtgtcggcgtgtcagtg 37598820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 22515827 - 22515954
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||||| |||| || | ||||| || |||||| |||||||||||| ||||||||||||||||| |||||  |||||||    
T  22515827 ctatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatatgtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgatttt 22515926  T
Q  418 ttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||| |||||| |||||||    
T  22515927 ttcaaattattagctgtgtctgcgtgtc 22515954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 46348323 - 46348454
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| |  ||| |||| | |||| || | ||||| |||| |||| |||||||||||| ||||||||||||||||| ||||| ||||||||    
T  46348323 ctatgaagcacggacacacctcggatcaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaattatatgatttt 46348422  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| |||||| |||||||||||    
T  46348423 ttcaaattattagctgtgtcggcgtgtcagtg 46348454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 42359391 - 42359520
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||||| | |||| |||||| |||| |||| ||||| ||||   ||  ||||||||||| ||||||||||||||||||||||   |||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacacgtcttgtccgacaccgacacttgtaattacactgaattttgtgatttttt 42359490  T
Q  420 caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| ||||||||||||||||||    
T  42359491 caaattattagatgtgtcagcgtgtcagtg 42359520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 314 - 437
Target Start/End: Complemental strand, 51410148 - 51410024
Alignment:
Q  314 taacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatga 413  Q
    |||||||||||||||| ||| ||||||||||| |||| || | ||||| || | |||| |||||||||||| |||||||||||||||||||||||  |||    
T  51410148 taacctatgaagcacgaatactccttggattaggcgtgtctcggtgtcggatacgtgtcgtgtccgacaccgacacttgtaattacactgaattatgtga 51410049  T
Q  414 -ttttttcaaattattagttgtgtc 437  Q
     ||||||||||||||||| ||||||    
T  51410048 tttttttcaaattattagatgtgtc 51410024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 38078601 - 38078732
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||| ||| |||| |||||| |||| |||  ||||   |||||||| |||||||||||| ||||||||||||||| |||||||  |||||||    
T  38078601 ctatgaagcacgaatactcctcggattaggcgtgtcctggtgttgaacatgtgtcgtgtccgacaccgacacttgtaattacattgaattatgtgatttt 38078700  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| ||||||  ||||||||||    
T  38078701 ttcaaattattagctgtgtcgacgtgtcagtg 38078732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 318 - 428
Target Start/End: Complemental strand, 18337448 - 18337338
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | |||| |||| | || | |||| ||||| |||| ||||||||||||||||| |||||||||||||||||||||||  |||||||    
T  18337448 ctatgaagcacggacactcctcggatcaggcatgtcccagtgtcggacacgtgttgtgtccgacaccgacacttgtaattacactgaattatgtgatttt 18337349  T
Q  418 ttcaaattatt 428  Q
    |||||||||||    
T  18337348 ttcaaattatt 18337338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 22881606 - 22881687
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||||||||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||    
T  22881606 gtgtcgtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtg 22881687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 341 - 449
Target Start/End: Complemental strand, 1815353 - 1815245
Alignment:
Q  341 gattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagc 440  Q
    ||||| |||| |||| ||||| ||||||||| ||||| |||||| |||||||||||||||||||||||  ||||||||| |||| |||| ||||||| ||    
T  1815353 gattaggcgtgtcccggtgtcggacatgtgtcgtgtcggacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggc 1815254  T
Q  441 gtgtcagtg 449  Q
    |||||||||    
T  1815253 gtgtcagtg 1815245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 24577186 - 24577253
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  24577186 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagttgtgtcagcgtgtc 24577253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 379 - 449
Target Start/End: Original strand, 28273089 - 28273159
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  28273089 gacaccgacacttgtaattacactgaattatatgattttttcaaatgattagttgtgtcagcatgtcagtg 28273159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 437
Target Start/End: Original strand, 40258874 - 40258992
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||||||| ||| | |||| |||||| |||| |||  ||||| |||| |||| ||||| |||||| |||||||||||||||||||||||  ||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggacaggtgtcgtgtctgacaccgacacttgtaattacactgaattatgtgattttt 40258973  T
Q  419 tcaaattattagttgtgtc 437  Q
    ||||||||||| |||||||    
T  40258974 tcaaattattaattgtgtc 40258992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 320 - 448
Target Start/End: Original strand, 1486646 - 1486779
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacca-----acacttgtaattacactgaattaaatgat 414  Q
    ||||||||| || | |||| |||||| |||| |||| ||||| |||| |||| ||||||||||| |     |||||| ||||||||||||||||  ||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacacgacaccgacacttataattacactgaattatgtgat 1486745  T
Q  415 tttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    |||||||||||||||| |||||||||||||||||    
T  1486746 tttttcaaattattagctgtgtcagcgtgtcagt 1486779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 31672890 - 31672966
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |||||| | |||||||||    
T  31672890 gtgtccgacaccgagacttgtaattacactgaattaagtgattttttcaaattattagctgtgtcggtgtgtcagtg 31672966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 378 - 447
Target Start/End: Complemental strand, 113358 - 113289
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcag 447  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||    
T  113358 cgacacctacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcag 113289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 335 - 439
Target Start/End: Original strand, 18190065 - 18190169
Alignment:
Q  335 tccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgt 434  Q
    |||| |||||| | || |||| ||||| |||| |||||||||| |||| | |||||||||||||||||||||||  | |||||||||||||||||| |||    
T  18190065 tcctcggattaggtgtgtcccggtgtcggacacgtgttgtgtctgacatcgacacttgtaattacactgaattatgtaattttttcaaattattaggtgt 18190164  T
Q  435 gtcag 439  Q
    |||||    
T  18190165 gtcag 18190169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 451
Target Start/End: Complemental strand, 31015157 - 31015029
Alignment:
Q  317 cctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattt 416  Q
    |||||||||||| |||  ||||||||||| |||| ||||  ||||||||| |||| |||||||||||      |||||||||||||||||||  ||||||    
T  31015157 cctatgaagcactgatcctccttggattaggcgtgtcccgatgtcagacacgtgtcgtgtccgacac------ttgtaattacactgaattatgtgattt 31015064  T
Q  417 tttcaaattattagttgtgtcagcgtgtcagtgcc 451  Q
    | |||||||||||| |||||  ||| |||||||||    
T  31015063 tctcaaattattagctgtgtaggcgcgtcagtgcc 31015029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 446
Target Start/End: Original strand, 32461393 - 32461531
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac----------caacacttgtaattacactgaatt 407  Q
    |||||||||||||| | | ||||||||| |||| |||| |||||||||| |||| |||||||||||          ||||||||||||||||| | ||||    
T  32461393 ctatgaagcacggacacttcttggattaggcgtgtcccagtgtcagacacgtgtcgtgtccgacaccgacacacaccaacacttgtaattacattaaatt 32461492  T
Q  408 aaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |  ||||||||||||||||||||||||| | ||||||||    
T  32461493 atgtgattttttcaaattattagttgtgccggcgtgtca 32461531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 47989627 - 47989486
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac-----------ttgtaattacactgaat 406  Q
    |||||||||||||| | |||| |||||| |||| ||||  |||||||||||||| |||||||||||| ||||           |||||||||||||||||    
T  47989627 ctatgaagcacggacactcctcggattaggcgtgtcccgatgtcagacatgtgtcgtgtccgacaccgacacgacaccgacacttgtaattacactgaat 47989528  T
Q  407 taaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||  ||||||||| ||||||||| ||||||| |||||||||||    
T  47989527 tatgtgatttttttaaattatta-ttgtgtcggcgtgtcagtg 47989486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 5927336 - 5927411
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||  ||||||||||||||| | ||||| |||||||||||||||||||||  |||| ||||||||||||    
T  5927336 tgtccgacactgacacttgtaattacattaaattatatgattttttcaaattattagcagtgttagcgtgtcagtg 5927411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 315 - 446
Target Start/End: Original strand, 39130704 - 39130835
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat 414  Q
    |||||| |||||| ||| | || ||||||||||||| ||||  ||||   || ||||||||||||||||| |||| | |||||||||| ||||| || ||    
T  39130704 aacctacgaagcatggacactctttggattaagcgtgtcccaatgtcgagcacgtgttgtgtccgacaccgacacatataattacactaaattatataat 39130803  T
Q  415 tttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||| | ||||||||| | ||||||||||||||    
T  39130804 tttctaaaattattaatagtgtcagcgtgtca 39130835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 13011205 - 13011287
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| | ||||||||||||||||||||| |||||  ||| ||||||||||||||||| |||||| || ||||||||    
T  13011205 gtgttgtgtccaaaaccaacacttgtaattacacttaattatgtgatttttttcaaattattagctgtgtcggcatgtcagtg 13011287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 357 - 455
Target Start/End: Complemental strand, 36878541 - 36878443
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgcctatg 455  Q
    ||||| ||||||| | ||||| |||||| |||| | ||||||||||||||||  ||||||| ||||||||||||  ||||| ||||||||||| |||||    
T  36878541 gtgtcggacatgtttcgtgtcagacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatg 36878443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 446
Target Start/End: Original strand, 19058851 - 19058924
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||| |||||||||||||||||||||||  | || |||| |||||||||| |||||| ||||||||    
T  19058851 gtgtccgacaccgacacttgtaattacactgaattatgttatctttttaaattattagctgtgtcggcgtgtca 19058924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 316 - 389
Target Start/End: Complemental strand, 25934748 - 25934675
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||||| | ||||||||| | ||||||||| |||||||||| |||| |||||||||||| ||||    
T  25934748 acctatgaagcacggacactccttggataaggcgtatccccgtgtcagacacgtgtcgtgtccgacaccgacac 25934675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 313 - 449
Target Start/End: Complemental strand, 5944418 - 5944269
Alignment:
Q  313 ttaacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccg-----------acaccaacacttgtaattacac 401  Q
    |||| |||||||||||| | | |||| |||||| ||||||||| ||||| |||||||||||||||||           ||||| |||||| |||||||||    
T  5944418 ttaatctatgaagcacgaacactcctcggattaggcgtatcccggtgtcggacatgtgttgtgtccgtcatcgacacgacaccgacacttataattacac 5944319  T
Q  402 tgaattaaatga--ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||  |||  ||||||||||||||||| |||| | |||||||||||    
T  5944318 tgaattatgtgattttttttcaaattattagctgtggcggcgtgtcagtg 5944269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 1704992 - 1705051
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| |||||||||||||| ||||||||  |||||||||||||||||||| ||||||    
T  1704992 cgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtc 1705051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 18556456 - 18556527
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| ||||||||||||| | |||||  |||| ||||||||||||||| |||||| |||||||||||    
T  18556456 cgacaccaatacttgtaattacattaaattatgtgatattttcaaattattagctgtgtcggcgtgtcagtg 18556527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 335 - 430
Target Start/End: Complemental strand, 40181973 - 40181878
Alignment:
Q  335 tccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| |||||| |||| |||| ||||  |||| ||||||||||||||||| | || | ||||||||||||||||  ||||||| ||||||||||||    
T  40181973 tcctcggattaggcgtgtcccggtgtaggacacgtgttgtgtccgacaccgatacatataattacactgaattatgtgattttctcaaattattag 40181878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 316 - 449
Target Start/End: Original strand, 5898204 - 5898337
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||| ||||||||| | |||| ||||||  ||| |||| ||||  |||| |||| ||||| |||||| || | | ||||||||||||||||  |||||    
T  5898204 acctataaagcacggacactcctcggattagacgtgtcccggtgttggacacgtgtcgtgtctgacaccgacgcatataattacactgaattatgtgatt 5898303  T
Q  416 ttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| ||||||||  ||||| |||| ||||||    
T  5898304 ttttcagattattagcggtgtcggcgtctcagtg 5898337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 357 - 430
Target Start/End: Original strand, 11605914 - 11605987
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||||| |  | || || |||||||| ||||||| |||||||||| |||||||||||||||||||||    
T  11605914 gtgtcagacatgtatcatatctgataccaacacatgtaatttcactgaattatatgattttttcaaattattag 11605987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 41597410 - 41597475
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacac 383  Q
    ||||||||||| || | ||||||||| ||||||||||| |||||||||| |||| |||||||||||    
T  41597410 ctatgaagcacagacactccttggataaagcgtatccccgtgtcagacacgtgtcgtgtccgacac 41597475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 340 - 445
Target Start/End: Original strand, 43492456 - 43492561
Alignment:
Q  340 ggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    |||||| |||| | || ||||| ||||||||||||||| |||||| ||||   ||||||||| ||||||  ||||||| |||||||| |||| ||||| |    
T  43492456 ggattaggcgtgtgccggtgtcggacatgtgttgtgtctgacaccgacacacataattacaccgaattacgtgattttctcaaattactagtggtgtcgg 43492555  T
Q  440 cgtgtc 445  Q
    ||||||    
T  43492556 cgtgtc 43492561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 449
Target Start/End: Original strand, 398780 - 398836
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||  ||||||||||||||||||||  ||||| |||||||||||    
T  398780 taattacactgaattatgtgattttttcaaattattagcggtgtcggcgtgtcagtg 398836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 446
Target Start/End: Original strand, 6612171 - 6612239
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| |||||||||||||||||||||||  | |||||||||||||||||  ||| || ||||||||    
T  6612171 cgacaccgacacttgtaattacactgaattatgtaattttttcaaattattaactgtatcggcgtgtca 6612239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 9103703 - 9103628
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| ||||||||| ||| ||| |||||  |||||||||||||||||||  |||||| |||||||||||    
T  9103703 gtgtccgacaccgacacttgta-ttaaactaaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtg 9103628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 21530769 - 21530697
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| ||||||||| |||||||||||| |||||| |||||| ||  ||||| |||||||| |||||||||||    
T  21530769 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 21530697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 373 - 449
Target Start/End: Original strand, 35702583 - 35702659
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||  ||||||||||||||||| |||||  |||  ||||||||||||||| |||||| || ||||||||    
T  35702583 gtgtccgacactgacacttgtaattacacttaattatttgaagttttcaaattattagctgtgtcggcatgtcagtg 35702659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 6332729 - 6332671
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| | |||||||||||||||||||||  ||| |||||||||||||||||||||||    
T  6332729 cgacaccgatacttgtaattacactgaattatgtga-tttttcaaattattagttgtgtc 6332671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 16927186 - 16927237
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||  | |||||||||||||||| |||||||||||||||||||||    
T  16927186 gacaccaacatatataattacactgaattatatgattttttcaaattattag 16927237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 437
Target Start/End: Original strand, 32434724 - 32434775
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||||||||    
T  32434724 acacttgtaattacaatgaattatgtgactttttcaaattattagttgtgtc 32434775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 40917808 - 40917740
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||| | ||||||||||||||| ||||   |||||||||||||||||||| |||||| ||||||||||    
T  40917808 cgacaccgagacttgtaattacacttaattg--tgattttttcaaattattagctgtgtcggcgtgtcagt 40917740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 48450595 - 48450658
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| |||||  | |||||||||||||||||| |||||  |||||||||||    
T  48450595 acacttgtaattacactaaattatgttattttttcaaattattagctgtgttggcgtgtcagtg 48450658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 7918226 - 7918279
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||||||||||||  ||||||| |||||||||||||  |||||||||||||    
T  7918226 taattacactgaattatgtgattttctcaaattattagtgatgtcagcgtgtca 7918279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 10572591 - 10572660
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||| | ||||||||| ||||||  ||||||| ||||||||||||| ||||| |||||||||||    
T  10572591 acaccgacacatttaattacaccgaattatgtgattttctcaaattattagtggtgtcggcgtgtcagtg 10572660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 21378635 - 21378578
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||| |||||||||||||||||||||||  | |||||||||| ||||||| ||||||    
T  21378635 acaccgacacttgtaattacactgaattatgtaattttttcaatttattagctgtgtc 21378578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 380 - 437
Target Start/End: Complemental strand, 23738735 - 23738678
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||||||| | ||||| ||||||||||  |||||||||||||||||||| ||||||    
T  23738735 acaccaacacatttaattgcactgaattatgtgattttttcaaattattagctgtgtc 23738678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 430
Target Start/End: Original strand, 41877465 - 41877522
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||| ||||||||||||||||| |||||  | ||||| ||||||||||||    
T  41877465 gtgtccgacaccgacacttgtaattacactaaattatgtaattttctcaaattattag 41877522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 434
Target Start/End: Complemental strand, 2283725 - 2283669
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgt 434  Q
    |||||||||||||| |||||||| ||||| |  ||||||||||||||||| ||||||    
T  2283725 cgacaccaacacttataattacattgaatcatgtgattttttcaaattataagttgt 2283669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 430
Target Start/End: Original strand, 9629900 - 9629952
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| |||||| |||| ||||||||||| |||||||| ||||||||||||    
T  9629900 cgacaccgacacttataatcacactgaattatatgattttatcaaattattag 9629952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 429
Target Start/End: Original strand, 22907318 - 22907390
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| |||||||||||||||| ||||| |||||| |||||| ||  ||||| || ||||| |||||||||||    
T  22907318 gtgtcggacatgtgttgtgtcccacaccgacacttataattataccaaattatataattttctcaaattatta 22907390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 429
Target Start/End: Complemental strand, 52903313 - 52903257
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||| |||| | |||||||||||||||| |||||||| | |||||||||    
T  52903313 gtgtccgacaccgacacatataattacactgaattatatgattttattaaattatta 52903257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 6427409 - 6427338
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| | |||||||| |||||||  ||||||| ||||||||||||  ||||  |||||||||||    
T  6427409 cgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtg 6427338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 445
Target Start/End: Complemental strand, 9828087 - 9828036
Alignment:
Q  394 aattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||  ||||||| ||||||||||||| ||||| |||||||    
T  9828087 aattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 12443476 - 12443527
Alignment:
Q  394 aattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||  ||||||| |||||||||||| |||||| |||||||    
T  12443476 aattacactgaattatgtgattttctcaaattattagctgtgtcggcgtgtc 12443527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 444
Target Start/End: Complemental strand, 13436522 - 13436451
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    ||||||||||||||||| | ||||||||||||||||  ||||||  | ||||||||||  ||||| ||||||    
T  13436522 gtgtccgacaccaacacatataattacactgaattatgtgatttccttaaattattagcagtgtcggcgtgt 13436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 14359530 - 14359588
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||||| |||||  ||||||| |||||||||||| |||||| |||||||    
T  14359530 acacttgtaattacactaaattatgtgatttt-tcaaattattagctgtgtcggcgtgtc 14359588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 408
Target Start/End: Original strand, 24334700 - 24334735
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaatta 408  Q
    |||||||||||| |||||||||||||||||||||||    
T  24334700 gtgtccgacaccgacacttgtaattacactgaatta 24334735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 430
Target Start/End: Original strand, 27471567 - 27471618
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||| ||||||||||||||||||  || |||| ||||||||||||    
T  27471567 gacaccaacacatgtaattacactgaattatgtgcttttctcaaattattag 27471618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 29144366 - 29144429
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||| ||||  |  ||||||||||||||||| |||||| |||| ||||||    
T  29144366 acacttgtaattacactgcattatctatttttttcaaattattagctgtgtcggcgtatcagtg 29144429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 34298480 - 34298425
Alignment:
Q  393 taattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagt 448  Q
    ||||||||||||||||  ||||||| ||||||||||||| ||||| | ||||||||    
T  34298480 taattacactgaattatgtgattttctcaaattattagtggtgtcggtgtgtcagt 34298425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 445
Target Start/End: Original strand, 10577676 - 10577802
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||||||||||| | ||||||||| | |||| |||| |||||||||| | || ||||||| | || |||| | ||||||||||| |||   |||||||     
T  10577676 tatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgcgtcgtgtccgcccccgacacatataattacactgcattttgtgattttc 10577775  T
Q  419 tcaaattattagttgtgtcagcgtgtc 445  Q
    | |||  ||||| |||||| |||||||    
T  10577776 taaaaaaattagctgtgtcggcgtgtc 10577802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 363 - 449
Target Start/End: Complemental strand, 13997957 - 13997871
Alignment:
Q  363 gacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| || ||| ||||| |||| | ||||||||||||||||  ||||||||| |||| ||||   ||||| |||||||||||    
T  13997957 gacatgtgtcgtctccaacaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtg 13997871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 368 - 449
Target Start/End: Original strand, 8842704 - 8842785
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||||||||||||| || | |||||||| | ||||| ||| |||| |||||||| |||| ||| | |||||||||||    
T  8842704 gtgtcgtgtccgacaccaatacatataattacattaaattatatgtttttctcaaattactagtggtgccggcgtgtcagtg 8842785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 17778605 - 17778549
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| |||||||||||||||||| ||    |||||||||||||||||||| ||||||    
T  17778605 cgacaccgacacttgtaattacactgtatg---tgattttttcaaattattagctgtgtc 17778549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 429
Target Start/End: Original strand, 1864875 - 1864931
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||| ||||| |||| | ||||||||||||||||  ||||||| |||||||||||    
T  1864875 gtgtccaacaccgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 397 - 449
Target Start/End: Original strand, 2896140 - 2896192
Alignment:
Q  397 tacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||  ||||||| ||||||||||||  ||||| |||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtg 2896192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 6427515 - 6427449
Alignment:
Q  386 acacttgtaattacactgaattaaatgatttttt---caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| ||||| |||||||  |||||||||   |||||||||||||||||| || ||||||||    
T  6427515 acacttgtagttacattgaattatgtgatttttttttcaaattattagttgtgtcggcatgtcagtg 6427449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 386 - 430
Target Start/End: Original strand, 8010295 - 8010339
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||| |||||| ||||||||| || ||||||||||||||||||    
T  8010295 acacttataattatactgaattatataattttttcaaattattag 8010339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 361 - 431
Target Start/End: Complemental strand, 14248902 - 14248836
Alignment:
Q  361 cagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagt 431  Q
    ||||||||| | |||||||||||  |||| |  |||||||||||||||  |||||||||||||||||||||    
T  14248902 cagacatgtatcgtgtccgacactgacacat--aattacactgaatta--tgattttttcaaattattagt 14248836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 64; Significance: 8e-28; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 8917 - 8786
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||||| | ||||  ||||| |||| || | ||||| |||| |||| |||||||||||| ||||||||||||||||| ||| | ||||||||    
T  8917 ctatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacaccgacacttgtaattacactaaataatatgatttt 8818  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||| |||||| |||||||||||    
T  8817 ttcaaattattagctgtgtcggcgtgtcagtg 8786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 8e-28; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 318 - 449
Target Start/End: Original strand, 36450694 - 36450825
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||||||||| || | |||| |||||| |||| |||  ||||| |||| | || |||||||||||| ||||||||||||||||||||||   |||||||    
T  36450694 ctatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacacgcgtcgtgtccgacacctacacttgtaattacactgaattctgtgatttt 36450793  T
Q  418 ttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||| |||||||||||    
T  36450794 ttcaaattattagttgtgtcggcgtgtcagtg 36450825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 375 - 449
Target Start/End: Complemental strand, 22596056 - 22595982
Alignment:
Q  375 gtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||||||||||||||  | ||||||| |||||||||| |||||| |||||||||||    
T  22596056 gtccgacaccaacacttgtaattacactgaattatgttatttttttaaattattagctgtgtcggcgtgtcagtg 22595982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 336 - 449
Target Start/End: Complemental strand, 31557097 - 31556985
Alignment:
Q  336 ccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtg 435  Q
    |||||||||| |||| |||  ||||| ||||||||| ||||| |||||| | |||||||||||||||||||||  ||| |||||||||||||||  ||||    
T  31557097 ccttggattaggcgtgtcctggtgtcggacatgtgtcgtgtctgacaccgaaacttgtaattacactgaattatgtga-tttttcaaattattaactgtg 31556999  T
Q  436 tcagcgtgtcagtg 449  Q
    || |||||||||||    
T  31556998 tcggcgtgtcagtg 31556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 373 - 432
Target Start/End: Complemental strand, 4948716 - 4948657
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagtt 432  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||    
T  4948716 gtgtccgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagtt 4948657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 15816129 - 15816200
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||| |||||||||| |||||  ||||||||||||||||||||||||||| |||||||||||    
T  15816129 cgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtg 15816200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 315 - 445
Target Start/End: Complemental strand, 5813714 - 5813584
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgat 414  Q
    |||||| |||||||||| | ||||   |||| |||| |||| ||||| |||| |||| |||||||||||| ||||||||| ||||||| || ||  |||     
T  5813714 aacctacgaagcacggacactcctccaattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccgacacttgtatttacactaaaatatgtgac 5813615  T
Q  415 tttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||| |||||| |||||||    
T  5813614 tttttcaaattattagctgtgtcggcgtgtc 5813584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 316 - 437
Target Start/End: Complemental strand, 18407840 - 18407719
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||||||||||||||| | ||||   |||| |||| |||  ||||| ||||||||| ||||||| || | |||||||||||||||||||||||  |||||    
T  18407840 acctatgaagcacggacactcctccaattaggcgtgtcctagtgtcggacatgtgtcgtgtccggcagcgacacttgtaattacactgaattatgtgatt 18407741  T
Q  416 ttttcaaattattagttgtgtc 437  Q
    ||||  ||||||||| ||||||    
T  18407740 tttttgaattattagctgtgtc 18407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 378 - 439
Target Start/End: Complemental strand, 25566900 - 25566839
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcag 439  Q
    ||||||| |||||||||||||||||||||||  |||||||||||||||||||| ||||||||    
T  25566900 cgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcag 25566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 20873133 - 20873057
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||| ||||||||||||||||| |||||  |||||||||||||||||||  | |||| |||||||||||    
T  20873133 gtgtccgacaccgacacttgtaattacactaaattatgtgattttttcaaattattatctatgtcggcgtgtcagtg 20873057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 437
Target Start/End: Complemental strand, 21465471 - 21465412
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||||||||||||||||||||  |||||| ||||||||||||||||||||| ||||||    
T  21465471 cgacaccaacacttgtaattacatcgaattatatgattttttcaaattattagctgtgtc 21465412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 22652035 - 22651964
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||||||||||||| | |||||||  |||||||||||||||||||| |||||| |||||||||||    
T  22652035 cgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 22651964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 430
Target Start/End: Complemental strand, 3025668 - 3025558
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||||| | |||| ||||||  ||| || | |||||||||| |||| |||||||||||  |||| | ||||||||||||||||  ||||||| |    
T  3025668 atgaagcacggacactcctcggattagccgtgtcacagtgtcagacacgtgtcgtgtccgacactgacacctataattacactgaattatgtgattttct 3025569  T
Q  420 caaattattag 430  Q
    |||||||||||    
T  3025568 caaattattag 3025558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 388 - 449
Target Start/End: Original strand, 4673435 - 4673496
Alignment:
Q  388 acttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||  ||||||||||||||||||||  |||||| |||||||||||    
T  4673435 acttgtaattacactgaattttatgattttttcaaattattatctgtgtcggcgtgtcagtg 4673496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 373 - 450
Target Start/End: Complemental strand, 24613584 - 24613508
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtgc 450  Q
    |||||||||||| ||||||||||||||||| |||||  ||| |||||||||||||||| |||||| | ||||||||||    
T  24613584 gtgtccgacaccgacacttgtaattacacttaattatgtga-tttttcaaattattagctgtgtcggtgtgtcagtgc 24613508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 29510306 - 29510375
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| ||||||||||||| ||||||||   |||||||||||||||||||| |||||| |||||||||||    
T  29510306 acaccgacacttgtaattatactgaattttgtgattttttcaaattattagctgtgtcggcgtgtcagtg 29510375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 368 - 439
Target Start/End: Complemental strand, 31514942 - 31514870
Alignment:
Q  368 gtgttgtgtccgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcag 439  Q
    |||| |||||| ||||||||||||||| |||| ||||||||  ||| ||||||||||||||||||||||||||    
T  31514942 gtgtcgtgtccaacaccaacacttgtagttacgctgaattatgtgatttttttcaaattattagttgtgtcag 31514870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 316 - 428
Target Start/End: Complemental strand, 40332312 - 40332200
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatt 415  Q
    |||| |||| |||||| | |||| |||||| |||  |||| ||||  |||| |||| |||||| ||||| |||||||||||||||||||||||  |||||    
T  40332312 acctgtgaaacacggacactcctcggattaggcgcgtcccggtgtgggacacgtgtcgtgtcccacaccgacacttgtaattacactgaattatgtgatt 40332213  T
Q  416 ttttcaaattatt 428  Q
    || ||||||||||    
T  40332212 ttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 43737752 - 43737836
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactg 403  Q
    ||||||||||||| | ||||||||| | ||||||||| ||||||||||  ||| |||||||||||| |||| | |||||||||||    
T  43737752 tatgaagcacggacactccttggataaggcgtatccccgtgtcagacacctgtcgtgtccgacaccgacacatataattacactg 43737836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 2572056 - 2572115
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    ||||||| ||||||||||||||||| |||||  |||||||||||||||||||| ||||||    
T  2572056 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattaggtgtgtc 2572115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 13436964 - 13437035
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||| |||||  |||||||  |||||||||||||||||||| |||||| |||||||||||    
T  13436964 cgacaccgacacttgttattaccatgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 13437035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 18170478 - 18170553
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| ||| ||||||||||| |||||||  | ||||||||||||| ||| ||||||| |||||||||||    
T  18170478 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtg 18170553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 374 - 449
Target Start/End: Original strand, 18634046 - 18634121
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| ||| ||||||||||| |||||||  | ||||||||||||| ||| ||||||| |||||||||||    
T  18634046 tgtccgacaccgacatttgtaattacattgaattatgtaattttttcaaatttttaattgtgtcggcgtgtcagtg 18634121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 318 - 429
Target Start/End: Original strand, 33405324 - 33405435
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    ||||| |||||||| | || ||||||||  ||| |||  ||||||||||||||| |||||||||||| |||| | |||||||||| |||||  || ||||    
T  33405324 ctatggagcacggacactcattggattagccgtgtccaggtgtcagacatgtgtcgtgtccgacaccgacacatataattacactaaattatgtgttttt 33405423  T
Q  418 ttcaaattatta 429  Q
     |||||||||||    
T  33405424 ctcaaattatta 33405435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 387 - 449
Target Start/End: Original strand, 30271300 - 30271362
Alignment:
Q  387 cacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| ||||  |||||||||||||| ||||| |||||| |||||||||||    
T  30271300 cacttgtaattacactgcattatgtgattttttcaaatgattagctgtgtcggcgtgtcagtg 30271362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 926730 - 926859
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttttt 419  Q
    |||||||||||| | |||| |||| |||| | |||| ||||| |||| |||| | |||||||||| |||||| |||||||||||||  |   |||||| |    
T  926730 atgaagcacggacactcctcggataaagcatgtcccggtgtcggacacgtgtcgcgtccgacaccgacacttataattacactgaacaatgagattttct 926829  T
Q  420 caaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||  ||||  |||||||||||    
T  926830 caaattattaggagtgttggcgtgtcagtg 926859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 430
Target Start/End: Complemental strand, 8343031 - 8342979
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||| ||||||||||||||||| |||||  ||||||||||||||||||||    
T  8343031 cgacaccgacacttgtaattacactaaattatgtgattttttcaaattattag 8342979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 437
Target Start/End: Original strand, 17468508 - 17468567
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||||||||||||||||||||| | ||||  |||||||| ||||||||| ||||||||    
T  17468508 cgacaccaacacttgtaattacaccgcattatgtgatttttacaaattatttgttgtgtc 17468567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 347 - 430
Target Start/End: Original strand, 20679364 - 20679447
Alignment:
Q  347 gcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| |||| ||||| |||| |||||| ||| |||||| |||||| ||||||||||||| ||  ||||||| ||||||||||||    
T  20679364 gcgtgtcccggtgtcggacacgtgttgcgtctgacaccgacacttataattacactgaactatgtgattttctcaaattattag 20679447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 24669492 - 24669421
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  | ||||  |||||||||||   |||||||||||||||||    
T  24669492 cgacaccgacacttgtaattacactgaattatgtaatttcctcaaattattaacggtgtcagcgtgtcagtg 24669421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 34450961 - 34451032
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||| | ||||||||| | |||| |||| |||||||||| |||| |||||||||||| ||||    
T  34450961 ctatgaagcacggacactccttggataaggcgtgtccccgtgtcagacacgtgtcgtgtccgacaccgacac 34451032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 449
Target Start/End: Complemental strand, 22204705 - 22204627
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaat-gat-tttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| |||||  ||||||||||||||||||||||| ||  || ||||| ||||||||||||||||| |||||||||||    
T  22204705 gtgtctgacactgacacttgtaattacactgaattatatatatattttttaaattattagttgtgtcggcgtgtcagtg 22204627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 379 - 437
Target Start/End: Original strand, 29447111 - 29447169
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| ||||||||| ||||| |||||||  ||||||| |||||||||||||||||||    
T  29447111 gacaccgacacttgtagttacattgaattatgtgattttctcaaattattagttgtgtc 29447169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 376 - 430
Target Start/End: Original strand, 30077385 - 30077439
Alignment:
Q  376 tccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||  |||||||||||||||||||||||  |||| |||||||||||||||    
T  30077385 tccgacacggacacttgtaattacactgaattatgtgatgttttcaaattattag 30077439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 318 - 403
Target Start/End: Original strand, 3951476 - 3951561
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactg 403  Q
    |||||||||||||| | ||||||||||| |||| | || |||||||||| |||| ||||| |||||| |||| | ||| |||||||    
T  3951476 ctatgaagcacggaaactccttggattaggcgtgttcccgtgtcagacacgtgtcgtgtctgacaccgacacatataagtacactg 3951561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 4298887 - 4298952
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    |||||| ||||||||||||||| | |||||  |||||||||||||||||||  |||||| ||||||    
T  4298887 gacaccgacacttgtaattacattaaattatgtgattttttcaaattattaactgtgtcggcgtgt 4298952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 376 - 449
Target Start/End: Original strand, 4786336 - 4786409
Alignment:
Q  376 tccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||| |||| | ||||||||||||||||  ||||||| | ||||||||| | ||||| |||||||||||    
T  4786336 tccgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtg 4786409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 373 - 430
Target Start/End: Complemental strand, 8343380 - 8343323
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| ||||||  ||||||||||||||||| |||||  ||||||||||||||||||||    
T  8343380 gtgtacgacactgacacttgtaattacactaaattatgtgattttttcaaattattag 8343323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 384 - 449
Target Start/End: Original strand, 41838129 - 41838194
Alignment:
Q  384 caacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||| || ||||||||||  ||||||||| |||||||||| ||||||  ||||||||||    
T  41838129 caacacttgtagttgcactgaattatgtgatttttttaaattattagctgtgtcgacgtgtcagtg 41838194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 13844591 - 13844663
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||| |||| | |||||||||| |||||  ||||||| ||||||||||||  ||||| |||||||    
T  13844591 gtgtccgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtc 13844663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 381 - 449
Target Start/End: Original strand, 25192350 - 25192418
Alignment:
Q  381 caccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| |||||| |||||| |||||||||  | | |||||||||||||||| |||||| |||||||||||    
T  25192350 caccgacacttataattatactgaattatgtcactttttcaaattattagctgtgtcggcgtgtcagtg 25192418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 22197750 - 22197813
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||| |||||  ||| |||||||||||||||| |||||  |||||| ||||    
T  22197750 acacttgtaattacactaaattatgtgaatttttcaaattattagctgtgttggcgtgttagtg 22197813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 41831948 - 41831991
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||||||| |||||||||||||  |||||||||||||||||||    
T  41831948 acacttgtagttacactgaattatgtgattttttcaaattatta 41831991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 380 - 430
Target Start/End: Complemental strand, 7442902 - 7442852
Alignment:
Q  380 acaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||||||||||||||||||||||||||||  | ||||| | ||||||||||    
T  7442902 acaccaacacttgtaattacactgaattatgtaattttatgaaattattag 7442852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 24196630 - 24196664
Alignment:
Q  411 tgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||||||||||||||||||||| |||||||    
T  24196630 tgattttttcaaattattagttgtgtcggcgtgtc 24196664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 372 - 430
Target Start/End: Complemental strand, 34897150 - 34897092
Alignment:
Q  372 tgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||||||||| | |||| | ||||||||||||||||  ||||||| ||||||||||||    
T  34897150 tgtgtccgacatcgacacatataattacactgaattatgtgattttctcaaattattag 34897092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 438
Target Start/End: Complemental strand, 44694851 - 44694790
Alignment:
Q  377 ccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtca 438  Q
    ||||| ||||||||||||||||| || |||||  ||||||||| |||||||| | |||||||    
T  44694851 ccgacgccaacacttgtaattacgcttaattatgtgattttttaaaattatttgctgtgtca 44694790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 382
Target Start/End: Original strand, 6065586 - 6065650
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgaca 382  Q
    |||||||||||||| | |||||| |||| |||| | || ||||| ||||||||| ||||||||||    
T  6065586 ctatgaagcacggacactccttgaattatgcgtgttccggtgtcggacatgtgtcgtgtccgaca 6065650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 374 - 430
Target Start/End: Original strand, 12606825 - 12606881
Alignment:
Q  374 tgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    |||| |||||| |||| | |||||||| ||||||| |||||||| ||||||||||||    
T  12606825 tgtctgacaccgacacatataattacattgaattatatgattttctcaaattattag 12606881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 373 - 445
Target Start/End: Original strand, 31236572 - 31236644
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||| |||| |||| | |||||||| |||||||  ||||||| ||||||||||||  ||||| |||||||    
T  31236572 gtgtccgtcaccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtc 31236644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 445
Target Start/End: Complemental strand, 14646 - 14522
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgatttt 417  Q
    |||||||||||| | | ||||| ||||| |||| || | ||||| |||| |||| |||||||||||||   ||||||||||||||||||||  |||||||    
T  14646 ctatgaagcacgtacactccttcgattaggcgtgtctcggtgtcggacacgtgtcgtgtccgacacca---cttgtaattacactgaattatgtgatttt 14550  T
Q  418 ttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||||||| |||||||    
T  14549 ttcaaattattagttgtgtcggcgtgtc 14522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 56; Significance: 5e-23; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 318 - 437
Target Start/End: Original strand, 4821 - 4943
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtcc--gacaccaacacttgtaattacactgaattaaatga-t 414  Q
    |||||||||||||| | |||| |||||| |||| |||||||||| ||||||||| |||| |  ||||||||||||||||||||||||||||||  ||| |    
T  4821 ctatgaagcacggacactcctcggattaggcgtgtccctgtgtcggacatgtgtcgtgtacaagacaccaacacttgtaattacactgaattatgtgatt 4920  T
Q  415 tttttcaaattattagttgtgtc 437  Q
    ||||| |||||||||| ||||||    
T  4921 ttttttaaattattagctgtgtc 4943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 403 - 533
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttt 418  Q
    ||||||||||||| | |||| |||||| | || |||| ||||| |||| | || |||||||||||| ||||||||||||||||||||||   ||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacgcgtcgtgtccgacaccgacacttgtaattacactgaattttgtgattttt 502  T
Q  419 tcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||  ||||| |||| ||||||    
T  503 tcaaattattagcagtgtcggcgtatcagtg 533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 364 - 445
Target Start/End: Complemental strand, 8082 - 8002
Alignment:
Q  364 acatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||| ||| |||||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||||||||| |||||||    
T  8082 acatatgtcgtgtccgacaccgacactt-taattacactgtattatatgattttttcaaattattagttgtgtcggcgtgtc 8002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 384 - 449
Target Start/End: Complemental strand, 51864 - 51799
Alignment:
Q  384 caacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||||  |||||||||||||||||||| |||||| |||||||||||    
T  51864 caacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtg 51799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 379 - 444
Target Start/End: Original strand, 17750 - 17815
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgt 444  Q
    |||||| ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||    
T  17750 gacaccgacacttgtaattacactaaattatgtgattttttcaaattattagttgtgtcagcgtgt 17815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 449
Target Start/End: Complemental strand, 13523 - 13388
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac------ttgtaattacactgaattaaatga 413  Q
    |||||||||||| | ||||||||||| | || |||  |||||||||  |||| |||||||||||| ||||      |||||||| ||||||||||  |||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 13424  T
Q  414 ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||||||||||||||||||| |||||||||||    
T  13423 ttttctcaaattattagttgtgtcggcgtgtcagtg 13388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 449
Target Start/End: Original strand, 21804 - 21939
Alignment:
Q  320 atgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac------ttgtaattacactgaattaaatga 413  Q
    |||||||||||| | ||||||||||| | || |||  |||||||||  |||| |||||||||||| ||||      |||||||| ||||||||||  |||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtcagacgcgtgtcgtgtccgacaccgacaccgacccttgtaattgcactgaattatgtga 21903  T
Q  414 ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||| ||||||||||||||||||| |||||||||||    
T  21904 ttttctcaaattattagttgtgtcggcgtgtcagtg 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 49; Significance: 7e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 386 - 449
Target Start/End: Original strand, 178826 - 178890
Alignment:
Q  386 acacttgtaattacactgaattaa-atgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||    
T  178826 acacttgtaattacactgaattatgatgattttttcaaattattagttgtgtcggcgtgtcagtg 178890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0722 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0722
Description:

Target: scaffold0722; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 340 - 437
Target Start/End: Original strand, 6994 - 7091
Alignment:
Q  340 ggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtc 437  Q
    |||||| |||||||||  | ||||| | ||||||||||||||||| ||||||||||||| ||| |||||  | |||||||||||||||||| ||||||    
T  6994 ggattaggcgtatcccgatatcagatacgtgttgtgtccgacacctacacttgtaattatactaaattatgtaattttttcaaattattagctgtgtc 7091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 386 - 446
Target Start/End: Complemental strand, 20223 - 20163
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||||||||||||||||||||||  |||||||||||||||||||| |||||| ||||||||    
T  20223 acacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtca 20163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 318 - 408
Target Start/End: Original strand, 45470 - 45560
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaatta 408  Q
    |||||||||||| | | || |||||||| || | || | |||||||||| |||| |||||||||||| |||||||||||||||||||||||    
T  45470 ctatgaagcacgtacaatctttggattaggcatgtcgcggtgtcagacacgtgtcgtgtccgacaccgacacttgtaattacactgaatta 45560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 385 - 449
Target Start/End: Complemental strand, 19627 - 19564
Alignment:
Q  385 aacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||| || |||||||||||    
T  19627 aacacttgtaattacactgaattatgtgattttt-caaattattagttgtatcggcgtgtcagtg 19564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 70358 - 70286
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| |||| |||| |||||||||||| |||||| ||||||||||||||||  | |||||||||||||||||    
T  70358 gtgtcggacacgtgtcgtgtccgacaccgacacttataattacactgaattatgttattttttcaaattatta 70286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 378 - 446
Target Start/End: Complemental strand, 46741 - 46673
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    ||||||| ||| |||||||||||||||||||  |||||||||||||||||||  |||||| ||||||||    
T  46741 cgacaccgacatttgtaattacactgaattatgtgattttttcaaattattaactgtgtcggcgtgtca 46673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 7316 - 7378
Alignment:
Q  383 ccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    ||||||||| |||||||||| |||||  |||||||| |||||||||||||||||| |||||||    
T  7316 ccaacacttataattacactaaattatgtgatttttccaaattattagttgtgtcggcgtgtc 7378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 1724 - 1652
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| ||||||||| |||||||||||| |||||| |||||| ||  ||||| |||||||| |||||||||||    
T  1724 gtgtcggacatgtgtcgtgtccgacaccgacacttataattataccaaattatatgattttctcaaattatta 1652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 23829 - 23757
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatga-ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||||||||||||||||||||  ||| ||||||||||||||||  |||| ||| |||||||||    
T  23829 cgacaccgacacttgtaattacactgaattatgtgatttttttcaaattattaactgtgacagtgtgtcagtg 23757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 8635 - 8706
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| ||| ||||||||| || ||||||  |||| |||||||||||||||||||||| || ||||||||    
T  8635 cgacaccgacatttgtaattataccgaattatgtgatattttcaaattattagttgtgtcggcatgtcagtg 8706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 33375 - 33430
Alignment:
Q  390 ttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtc 445  Q
    |||||||||||||||||||  | |||||||||||||||||| |||||| |||||||    
T  33375 ttgtaattacactgaattatgttattttttcaaattattagctgtgtcggcgtgtc 33430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000004; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 92858 - 92795
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||||||||||||||||||||  | ||||| ||||||||||||  ||||| |||||||||||    
T  92858 acacttgtaattacactgaattatgtaattttctcaaattattagcggtgtcggcgtgtcagtg 92795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 379 - 449
Target Start/End: Complemental strand, 123686 - 123613
Alignment:
Q  379 gacaccaacacttgtaattacactgaattaaatga---ttttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    |||||| |||||||||||||||||||||||  |||   |||||| |||||||||| |||||  |||||||||||    
T  123686 gacaccgacacttgtaattacactgaattatgtgattctttttttaaattattagctgtgttggcgtgtcagtg 123613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 92940 - 92875
Alignment:
Q  319 tatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacacc 384  Q
    ||||||||||||| | |||| |||||| |||| |||  ||||| ||||||||| ||||||||||||    
T  92940 tatgaagcacggacactcctcggattaggcgtgtccaggtgtccgacatgtgtcgtgtccgacacc 92875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 241653 - 241582
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||  |||||||||| |||||  |||||||| ||||||||||| |||||| |||||||||||    
T  241653 cgacaccgacactcataattacactaaattatgtgatttttccaaattattagctgtgtcggcgtgtcagtg 241582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 241724 - 241653
Alignment:
Q  318 ctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||| | | || |||||| |||| |||| ||||| |||| |||| |||||||||||||||||    
T  241724 ctatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacacgtgtcgtgtccgacaccaacac 241653  T

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Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 378 - 431
Target Start/End: Original strand, 9747 - 9800
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagt 431  Q
    ||||||| |||| | ||||||||||||||||| ||||||| |||||||||||||    
T  9747 cgacaccgacacatataattacactgaattaagtgattttctcaaattattagt 9800  T

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Target: scaffold0021 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 381 - 446
Target Start/End: Complemental strand, 130538 - 130473
Alignment:
Q  381 caccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtca 446  Q
    |||| |||||||||||||||||||||||  ||||||||||||| |||||  |||||| || |||||    
T  130538 caccgacacttgtaattacactgaattatgtgattttttcaaactattaactgtgtcggcttgtca 130473  T

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Target: scaffold0380 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0380
Description:

Target: scaffold0380; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 376
Target Start/End: Complemental strand, 8722 - 8662
Alignment:
Q  316 acctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgt 376  Q
    |||||||||||||||| | ||||||||||| ||||||||| ||||| |||| |||| ||||    
T  8722 acctatgaagcacggacactccttggattaggcgtatcccagtgtcggacacgtgtcgtgt 8662  T

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Target: scaffold0022 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 357 - 429
Target Start/End: Complemental strand, 90923 - 90851
Alignment:
Q  357 gtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    ||||| |||| |||||||||| |||| | |||  | |||||||||||||||| |||||||| |||||||||||    
T  90923 gtgtcggacacgtgttgtgtctgacatcgacatatataattacactgaattatatgattttctcaaattatta 90851  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 378 - 449
Target Start/End: Complemental strand, 23479 - 23408
Alignment:
Q  378 cgacaccaacacttgtaattacactgaattaaatgattttttcaaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||||| |||||| ||||||||||||||||  |||||||||  | ||||||  |||||| |||||||||||    
T  23479 cgacaccgacacttataattacactgaattatgtgatttttttgagttattatctgtgtcggcgtgtcagtg 23408  T

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Target: scaffold0136 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 386 - 429
Target Start/End: Original strand, 3857 - 3900
Alignment:
Q  386 acacttgtaattacactgaattaaatgattttttcaaattatta 429  Q
    |||||||||||||||||||||||  ||||||||| |||||||||    
T  3857 acacttgtaattacactgaattatgtgatttttttaaattatta 3900  T

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Target: scaffold0475 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 3428 - 3338
Alignment:
Q  317 cctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacacttgtaattacactgaatt 407  Q
    ||||||||||||||| | |||| |||||| |||| |||| |||||   || ||||  ||||||||||  ||||||||||||||||| ||||    
T  3428 cctatgaagcacggacactcctcggattaggcgtgtcccagtgtccaccacgtgtcttgtccgacactgacacttgtaattacacttaatt 3338  T

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Target: scaffold0019 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 386 - 449
Target Start/End: Complemental strand, 71776 - 71711
Alignment:
Q  386 acacttgtaattacactgaattaaatgatttttt--caaattattagttgtgtcagcgtgtcagtg 449  Q
    ||||| ||||||||||||||||   |||||||||  ||||||||||| |||||| |||||||||||    
T  71776 acactagtaattacactgaattgtgtgattttttttcaaattattagctgtgtcggcgtgtcagtg 71711  T

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Target: scaffold0019; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 389
Target Start/End: Complemental strand, 71858 - 71784
Alignment:
Q  315 aacctatgaagcacggatattccttggattaagcgtatccctgtgtcagacatgtgttgtgtccgacaccaacac 389  Q
    |||||||||||||| || | |||| ||||||  ||| |||| ||||| |||| ||||||||||||||||| ||||    
T  71858 aacctatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacacgtgttgtgtccgacaccgacac 71784  T

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Target: scaffold0049 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 430
Target Start/End: Complemental strand, 63837 - 63780
Alignment:
Q  373 gtgtccgacaccaacacttgtaattacactgaattaaatgattttttcaaattattag 430  Q
    ||||| |||||| |||||||||||| ||||||||||  | ||||| ||||||||||||    
T  63837 gtgtctgacaccgacacttgtaattgcactgaattatgtaattttctcaaattattag 63780  T

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